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MELO3C005649 (gene) of Melon (DHL92) v4 genome

Gene IDMELO3C005649
OrganismCucumis melo DHL92 (Melon (DHL92) v4)
DescriptionF-box/LRR-repeat protein
Genome locationchr09:21916504..21916761
RNA-Seq ExpressionMELO3C005649
SyntenyMELO3C005649
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0042782.1 F-box/LRR-repeat protein [Cucumis melo var. makuwa]4.8e-3898.82Show/hide
Query:  MASQNSTPPSLFLFLFIILLTTTPLHAARRLPASAPQPENDSLRPPTTTTFSFAQPPAAVDDQITSRNYRVSLRKVPAGPNPLHN
        MASQNSTPPSLFLFLFIILLTTTPLHAARRLPASAPQPENDSLRPPTTTTFSFAQPPAAVDDQITSRNY VSLRKVPAGPNPLHN
Subjt:  MASQNSTPPSLFLFLFIILLTTTPLHAARRLPASAPQPENDSLRPPTTTTFSFAQPPAAVDDQITSRNYRVSLRKVPAGPNPLHN

KAG6579492.1 hypothetical protein SDJN03_23940, partial [Cucurbita argyrosperma subsp. sororia]5.6e-1868.6Show/hide
Query:  MASQNSTPPSLFLFLFIILLTTT-PLHAARRLPASAPQPENDSLRPPTTTTFSFAQPPAAVDDQITSRNYRVSLRKVPAGPNPLHN
        MASQN    SL LFLFIILLTTT PL A RRL  +   PENDSL PP TT+FSF QPP  V++Q  S+NY VS RKVPAGPNPLHN
Subjt:  MASQNSTPPSLFLFLFIILLTTT-PLHAARRLPASAPQPENDSLRPPTTTTFSFAQPPAAVDDQITSRNYRVSLRKVPAGPNPLHN

KAG6606114.1 Methyl-CpG-binding domain-containing protein 13, partial [Cucurbita argyrosperma subsp. sororia]5.6e-1055.7Show/hide
Query:  MASQNSTPPSLFLFLFIILLTTTPLHAARRLPASAPQPENDSLRPPTTTTFSFAQPPAAVDDQITSRNYRVSLRKVPAG
        MAS N     L LFL  ILLTT  L A     A A QP NDSL+PPT++TFS  + P AV+D I  +N+ VSLRKVPAG
Subjt:  MASQNSTPPSLFLFLFIILLTTTPLHAARRLPASAPQPENDSLRPPTTTTFSFAQPPAAVDDQITSRNYRVSLRKVPAG

KGN50125.1 hypothetical protein Csa_000058 [Cucumis sativus]1.8e-2985.39Show/hide
Query:  MASQNSTPP-SLFLFLFIILL-TTTPLHAARRLPASAPQPEND--SLRPPTTTTFSFAQPPAAVDDQITSRNYRVSLRKVPAGPNPLHN
        MASQNS PP SLFLFLF+ILL TTTPLHAARR P SAPQPEND  SL PPTT+TFSF QPPAAV+DQITSRNY VSLRKVPAGPNPLHN
Subjt:  MASQNSTPP-SLFLFLFIILL-TTTPLHAARRLPASAPQPEND--SLRPPTTTTFSFAQPPAAVDDQITSRNYRVSLRKVPAGPNPLHN

TrEMBL top hitse value%identityAlignment
A0A0A0KKA9 Uncharacterized protein8.9e-3085.39Show/hide
Query:  MASQNSTPP-SLFLFLFIILL-TTTPLHAARRLPASAPQPEND--SLRPPTTTTFSFAQPPAAVDDQITSRNYRVSLRKVPAGPNPLHN
        MASQNS PP SLFLFLF+ILL TTTPLHAARR P SAPQPEND  SL PPTT+TFSF QPPAAV+DQITSRNY VSLRKVPAGPNPLHN
Subjt:  MASQNSTPP-SLFLFLFIILL-TTTPLHAARRLPASAPQPEND--SLRPPTTTTFSFAQPPAAVDDQITSRNYRVSLRKVPAGPNPLHN

A0A5A7THA6 F-box/LRR-repeat protein2.3e-3898.82Show/hide
Query:  MASQNSTPPSLFLFLFIILLTTTPLHAARRLPASAPQPENDSLRPPTTTTFSFAQPPAAVDDQITSRNYRVSLRKVPAGPNPLHN
        MASQNSTPPSLFLFLFIILLTTTPLHAARRLPASAPQPENDSLRPPTTTTFSFAQPPAAVDDQITSRNY VSLRKVPAGPNPLHN
Subjt:  MASQNSTPPSLFLFLFIILLTTTPLHAARRLPASAPQPENDSLRPPTTTTFSFAQPPAAVDDQITSRNYRVSLRKVPAGPNPLHN

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTTCTCAAAACTCCACTCCTCCTTCTCTCTTCCTCTTCCTCTTCATAATTCTCCTCACCACCACCCCTCTCCACGCCGCCCGCCGTCTCCCCGCCTCAGCCCCACA
ACCGGAAAATGATTCTCTCCGCCCACCCACCACCACAACATTTTCATTCGCACAACCGCCCGCCGCCGTGGATGACCAAATCACTTCCCGAAACTACCGCGTTTCACTCC
GCAAAGTCCCCGCCGGTCCCAACCCACTTCATAACTAA
mRNA sequenceShow/hide mRNA sequence
ATGGCTTCTCAAAACTCCACTCCTCCTTCTCTCTTCCTCTTCCTCTTCATAATTCTCCTCACCACCACCCCTCTCCACGCCGCCCGCCGTCTCCCCGCCTCAGCCCCACA
ACCGGAAAATGATTCTCTCCGCCCACCCACCACCACAACATTTTCATTCGCACAACCGCCCGCCGCCGTGGATGACCAAATCACTTCCCGAAACTACCGCGTTTCACTCC
GCAAAGTCCCCGCCGGTCCCAACCCACTTCATAACTAA
Protein sequenceShow/hide protein sequence
MASQNSTPPSLFLFLFIILLTTTPLHAARRLPASAPQPENDSLRPPTTTTFSFAQPPAAVDDQITSRNYRVSLRKVPAGPNPLHN