; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

MELO3C005706 (gene) of Melon (DHL92) v4 genome

Gene IDMELO3C005706
OrganismCucumis melo DHL92 (Melon (DHL92) v4)
Description40S ribosomal protein S10-1
Genome locationchr09:22334035..22335823
RNA-Seq ExpressionMELO3C005706
SyntenyMELO3C005706
Gene Ontology termsGO:0022627 - cytosolic small ribosomal subunit (cellular component)
GO:0003723 - RNA binding (molecular function)
GO:0003735 - structural constituent of ribosome (molecular function)
InterPro domainsIPR005326 - Plectin/S10, N-terminal
IPR036388 - Winged helix-like DNA-binding domain superfamily
IPR037447 - 40S Ribosomal protein S10


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_011654726.1 40S ribosomal protein S10-1 [Cucumis sativus]8.2e-9699.44Show/hide
Query:  MIIPEKNRKEISKYLFQEGVCYAKKDYNLAKHPEIDVPNLQVIKLMQSFKSKEYVRETFAWMHYYWYLTNDGIEFLRTYLNLPSEIVPATLKKQAKPAGR
        MIIPEKNRKEISKYLFQEGVCYAKKDYNLAKHPEIDVPNLQVIKLMQSFKSKEYVRETFAWMHYYWYLTNDGIEFLRTYLNLPSEIVPATLKKQAKPAGR
Subjt:  MIIPEKNRKEISKYLFQEGVCYAKKDYNLAKHPEIDVPNLQVIKLMQSFKSKEYVRETFAWMHYYWYLTNDGIEFLRTYLNLPSEIVPATLKKQAKPAGR

Query:  PFGGPSGDRPRGPSRFDGERRFGDRDGYRGGSRGPGGDFGDKGGAPADYRPSFGGPGGRPGFGRGAGGYGGAPAPSNLE
        PFGGPSGDRPRGPSRFDGERRFGDRDGYRGG RGPGGDFGDKGGAPADYRPSFGGPGGRPGFGRGAGGYGGAPAPSNLE
Subjt:  PFGGPSGDRPRGPSRFDGERRFGDRDGYRGGSRGPGGDFGDKGGAPADYRPSFGGPGGRPGFGRGAGGYGGAPAPSNLE

XP_016898887.1 PREDICTED: 40S ribosomal protein S10-1 [Cucumis melo]2.2e-96100Show/hide
Query:  MIIPEKNRKEISKYLFQEGVCYAKKDYNLAKHPEIDVPNLQVIKLMQSFKSKEYVRETFAWMHYYWYLTNDGIEFLRTYLNLPSEIVPATLKKQAKPAGR
        MIIPEKNRKEISKYLFQEGVCYAKKDYNLAKHPEIDVPNLQVIKLMQSFKSKEYVRETFAWMHYYWYLTNDGIEFLRTYLNLPSEIVPATLKKQAKPAGR
Subjt:  MIIPEKNRKEISKYLFQEGVCYAKKDYNLAKHPEIDVPNLQVIKLMQSFKSKEYVRETFAWMHYYWYLTNDGIEFLRTYLNLPSEIVPATLKKQAKPAGR

Query:  PFGGPSGDRPRGPSRFDGERRFGDRDGYRGGSRGPGGDFGDKGGAPADYRPSFGGPGGRPGFGRGAGGYGGAPAPSNLE
        PFGGPSGDRPRGPSRFDGERRFGDRDGYRGGSRGPGGDFGDKGGAPADYRPSFGGPGGRPGFGRGAGGYGGAPAPSNLE
Subjt:  PFGGPSGDRPRGPSRFDGERRFGDRDGYRGGSRGPGGDFGDKGGAPADYRPSFGGPGGRPGFGRGAGGYGGAPAPSNLE

XP_022158473.1 transcription factor MYB39-like [Momordica charantia]3.4e-9497.77Show/hide
Query:  MIIPEKNRKEISKYLFQEGVCYAKKDYNLAKHPEIDVPNLQVIKLMQSFKSKEYVRETFAWMHYYWYLTNDGIEFLRTYLNLPSEIVPATLKKQAKPAGR
        +II EKNR+EISKYLFQEGVCYAKKDYNLAKHPEIDVPNLQVIKLMQSFKSKEYVRETFAWMHYYWYLTNDGIEFLRTYLNLPSEIVPATLKKQAKPAGR
Subjt:  MIIPEKNRKEISKYLFQEGVCYAKKDYNLAKHPEIDVPNLQVIKLMQSFKSKEYVRETFAWMHYYWYLTNDGIEFLRTYLNLPSEIVPATLKKQAKPAGR

Query:  PFGGPSGDRPRGPSRFDGERRFGDRDGYRGGSRGPGGDFGDKGGAPADYRPSFGGPGGRPGFGRGAGGYGGAPAPSNLE
        PFGGPSGDRPRGPSRFDGERRFGDRDGYRGG RGPGGDFGDKGGAPADYRPSFGGPGGRPGFGRGAGGYGGAPAPSNLE
Subjt:  PFGGPSGDRPRGPSRFDGERRFGDRDGYRGGSRGPGGDFGDKGGAPADYRPSFGGPGGRPGFGRGAGGYGGAPAPSNLE

XP_023549574.1 40S ribosomal protein S10-1-like [Cucurbita pepo subsp. pepo]1.3e-9397.77Show/hide
Query:  MIIPEKNRKEISKYLFQEGVCYAKKDYNLAKHPEIDVPNLQVIKLMQSFKSKEYVRETFAWMHYYWYLTNDGIEFLRTYLNLPSEIVPATLKKQAKPAGR
        MII EKNR+EISKYLFQEGVCYAKKDYNLAKHPEIDVPNLQVIKLMQSFKSKEYVRETFAWMHYYWYLTNDGIEFLRTYLNLPSEIVPATLKKQAKPAGR
Subjt:  MIIPEKNRKEISKYLFQEGVCYAKKDYNLAKHPEIDVPNLQVIKLMQSFKSKEYVRETFAWMHYYWYLTNDGIEFLRTYLNLPSEIVPATLKKQAKPAGR

Query:  PFGGPSGDRPRGPSRFDGERRFGDRDGYRGGSRGPGGDFGDKGGAPADYRPSFGGPGGRPGFGRGAGGYGGAPAPSNLE
        PFGGPSGDRPRGPSRFDGERRFGDRDGYRGG RG GGDFGDKGGAPADYRPSFGGPGGRPGFGRGAGGYGGAPAPSNLE
Subjt:  PFGGPSGDRPRGPSRFDGERRFGDRDGYRGGSRGPGGDFGDKGGAPADYRPSFGGPGGRPGFGRGAGGYGGAPAPSNLE

XP_038907155.1 40S ribosomal protein S10-1-like [Benincasa hispida]6.9e-9598.88Show/hide
Query:  MIIPEKNRKEISKYLFQEGVCYAKKDYNLAKHPEIDVPNLQVIKLMQSFKSKEYVRETFAWMHYYWYLTNDGIEFLRTYLNLPSEIVPATLKKQAKPAGR
        MIIPEKNRKEISKYLFQEGVCYAKKDYNLAKHPEIDVPNLQVIKLMQSFKSKEYVRETFAWMHYYWYLTNDGIEFLRTYLNLPSEIVPATLKKQAKPAGR
Subjt:  MIIPEKNRKEISKYLFQEGVCYAKKDYNLAKHPEIDVPNLQVIKLMQSFKSKEYVRETFAWMHYYWYLTNDGIEFLRTYLNLPSEIVPATLKKQAKPAGR

Query:  PFGGPSGDRPRGPSRFDGERRFGDRDGYRGGSRGPGGDFGDKGGAPADYRPSFGGPGGRPGFGRGAGGYGGAPAPSNLE
         FGGPSGDRPRGPSRFDGERRFGDRDGYRGG RGPGGDFGDKGGAPADYRPSFGGPGGRPGFGRGAGGYGGAPAPSNLE
Subjt:  PFGGPSGDRPRGPSRFDGERRFGDRDGYRGGSRGPGGDFGDKGGAPADYRPSFGGPGGRPGFGRGAGGYGGAPAPSNLE

TrEMBL top hitse value%identityAlignment
A0A0A0KK65 S10_plectin domain-containing protein4.0e-9699.44Show/hide
Query:  MIIPEKNRKEISKYLFQEGVCYAKKDYNLAKHPEIDVPNLQVIKLMQSFKSKEYVRETFAWMHYYWYLTNDGIEFLRTYLNLPSEIVPATLKKQAKPAGR
        MIIPEKNRKEISKYLFQEGVCYAKKDYNLAKHPEIDVPNLQVIKLMQSFKSKEYVRETFAWMHYYWYLTNDGIEFLRTYLNLPSEIVPATLKKQAKPAGR
Subjt:  MIIPEKNRKEISKYLFQEGVCYAKKDYNLAKHPEIDVPNLQVIKLMQSFKSKEYVRETFAWMHYYWYLTNDGIEFLRTYLNLPSEIVPATLKKQAKPAGR

Query:  PFGGPSGDRPRGPSRFDGERRFGDRDGYRGGSRGPGGDFGDKGGAPADYRPSFGGPGGRPGFGRGAGGYGGAPAPSNLE
        PFGGPSGDRPRGPSRFDGERRFGDRDGYRGG RGPGGDFGDKGGAPADYRPSFGGPGGRPGFGRGAGGYGGAPAPSNLE
Subjt:  PFGGPSGDRPRGPSRFDGERRFGDRDGYRGGSRGPGGDFGDKGGAPADYRPSFGGPGGRPGFGRGAGGYGGAPAPSNLE

A0A1S4DSB0 40S ribosomal protein S10-11.0e-96100Show/hide
Query:  MIIPEKNRKEISKYLFQEGVCYAKKDYNLAKHPEIDVPNLQVIKLMQSFKSKEYVRETFAWMHYYWYLTNDGIEFLRTYLNLPSEIVPATLKKQAKPAGR
        MIIPEKNRKEISKYLFQEGVCYAKKDYNLAKHPEIDVPNLQVIKLMQSFKSKEYVRETFAWMHYYWYLTNDGIEFLRTYLNLPSEIVPATLKKQAKPAGR
Subjt:  MIIPEKNRKEISKYLFQEGVCYAKKDYNLAKHPEIDVPNLQVIKLMQSFKSKEYVRETFAWMHYYWYLTNDGIEFLRTYLNLPSEIVPATLKKQAKPAGR

Query:  PFGGPSGDRPRGPSRFDGERRFGDRDGYRGGSRGPGGDFGDKGGAPADYRPSFGGPGGRPGFGRGAGGYGGAPAPSNLE
        PFGGPSGDRPRGPSRFDGERRFGDRDGYRGGSRGPGGDFGDKGGAPADYRPSFGGPGGRPGFGRGAGGYGGAPAPSNLE
Subjt:  PFGGPSGDRPRGPSRFDGERRFGDRDGYRGGSRGPGGDFGDKGGAPADYRPSFGGPGGRPGFGRGAGGYGGAPAPSNLE

A0A5A7TIX3 40S ribosomal protein S10-14.0e-9699.44Show/hide
Query:  MIIPEKNRKEISKYLFQEGVCYAKKDYNLAKHPEIDVPNLQVIKLMQSFKSKEYVRETFAWMHYYWYLTNDGIEFLRTYLNLPSEIVPATLKKQAKPAGR
        MIIPEKNRKEISKYLFQEGVCYAKKDYNLAKHPEIDVPNLQVIKLMQSFKSKEYVRETFAWMHYYWYLTNDGIEFLRTYLNLPSEIVPATLKKQAKPAGR
Subjt:  MIIPEKNRKEISKYLFQEGVCYAKKDYNLAKHPEIDVPNLQVIKLMQSFKSKEYVRETFAWMHYYWYLTNDGIEFLRTYLNLPSEIVPATLKKQAKPAGR

Query:  PFGGPSGDRPRGPSRFDGERRFGDRDGYRGGSRGPGGDFGDKGGAPADYRPSFGGPGGRPGFGRGAGGYGGAPAPSNLE
        PFGGPSGDRPRGPSRFDGERRFGDRDGYRGG RGPGGDFGDKGGAPADYRPSFGGPGGRPGFGRGAGGYGGAPAPSNLE
Subjt:  PFGGPSGDRPRGPSRFDGERRFGDRDGYRGGSRGPGGDFGDKGGAPADYRPSFGGPGGRPGFGRGAGGYGGAPAPSNLE

A0A6J1DW67 transcription factor MYB39-like1.7e-9497.77Show/hide
Query:  MIIPEKNRKEISKYLFQEGVCYAKKDYNLAKHPEIDVPNLQVIKLMQSFKSKEYVRETFAWMHYYWYLTNDGIEFLRTYLNLPSEIVPATLKKQAKPAGR
        +II EKNR+EISKYLFQEGVCYAKKDYNLAKHPEIDVPNLQVIKLMQSFKSKEYVRETFAWMHYYWYLTNDGIEFLRTYLNLPSEIVPATLKKQAKPAGR
Subjt:  MIIPEKNRKEISKYLFQEGVCYAKKDYNLAKHPEIDVPNLQVIKLMQSFKSKEYVRETFAWMHYYWYLTNDGIEFLRTYLNLPSEIVPATLKKQAKPAGR

Query:  PFGGPSGDRPRGPSRFDGERRFGDRDGYRGGSRGPGGDFGDKGGAPADYRPSFGGPGGRPGFGRGAGGYGGAPAPSNLE
        PFGGPSGDRPRGPSRFDGERRFGDRDGYRGG RGPGGDFGDKGGAPADYRPSFGGPGGRPGFGRGAGGYGGAPAPSNLE
Subjt:  PFGGPSGDRPRGPSRFDGERRFGDRDGYRGGSRGPGGDFGDKGGAPADYRPSFGGPGGRPGFGRGAGGYGGAPAPSNLE

A0A6J1ESX8 40S ribosomal protein S10-1-like6.3e-9497.77Show/hide
Query:  MIIPEKNRKEISKYLFQEGVCYAKKDYNLAKHPEIDVPNLQVIKLMQSFKSKEYVRETFAWMHYYWYLTNDGIEFLRTYLNLPSEIVPATLKKQAKPAGR
        MII EKNR+EISKYLFQEGVCYAKKDYNLAKHPEIDVPNLQVIKLMQSFKSKEYVRETFAWMHYYWYLTNDGIEFLRTYLNLPSEIVPATLKKQAKPAGR
Subjt:  MIIPEKNRKEISKYLFQEGVCYAKKDYNLAKHPEIDVPNLQVIKLMQSFKSKEYVRETFAWMHYYWYLTNDGIEFLRTYLNLPSEIVPATLKKQAKPAGR

Query:  PFGGPSGDRPRGPSRFDGERRFGDRDGYRGGSRGPGGDFGDKGGAPADYRPSFGGPGGRPGFGRGAGGYGGAPAPSNLE
        PFGGPSGDRPRGPSRFDGERRFGDRDGYRGG RG GGDFGDKGGAPADYRPSFGGPGGRPGFGRGAGGYGGAPAPSNLE
Subjt:  PFGGPSGDRPRGPSRFDGERRFGDRDGYRGGSRGPGGDFGDKGGAPADYRPSFGGPGGRPGFGRGAGGYGGAPAPSNLE

SwissProt top hitse value%identityAlignment
P0DKK8 40S ribosomal protein S10-15.9e-7378.69Show/hide
Query:  MIIPEKNRKEISKYLFQEGVCYAKKDYNLAKHPEIDVPNLQVIKLMQSFKSKEYVRETFAWMHYYWYLTNDGIEFLRTYLNLPSEIVPATLKKQAKPAGR
        MIIP+KNR EI KYLFQEGV YAKKDYNLAKHP+IDVPNLQVIKLMQSFKSKEYVRETF+W +YYWYLTNDGIE LR YLNLPSEIVPATLKK A+P GR
Subjt:  MIIPEKNRKEISKYLFQEGVCYAKKDYNLAKHPEIDVPNLQVIKLMQSFKSKEYVRETFAWMHYYWYLTNDGIEFLRTYLNLPSEIVPATLKKQAKPAGR

Query:  PFG-GPSGDRPRGPSRFDGER-RFGDRDGYRGGSRGPGGDF-GDKGGAPADYRPSFGGPGGRPGFGR-GAGGYGGAPAPSNLE
        PFG GP GDRPRGP RF+G+R RFGDRDGYRGG RG  GDF G+KGGAPA+++PSF   GGRPGFGR G GG+G  P  S++E
Subjt:  PFG-GPSGDRPRGPSRFDGER-RFGDRDGYRGGSRGPGGDF-GDKGGAPADYRPSFGGPGGRPGFGR-GAGGYGGAPAPSNLE

P0DKK9 40S ribosomal protein S10-25.9e-7378.69Show/hide
Query:  MIIPEKNRKEISKYLFQEGVCYAKKDYNLAKHPEIDVPNLQVIKLMQSFKSKEYVRETFAWMHYYWYLTNDGIEFLRTYLNLPSEIVPATLKKQAKPAGR
        MIIP+KNR EI KYLFQEGV YAKKDYNLAKHP+IDVPNLQVIKLMQSFKSKEYVRETF+W +YYWYLTNDGIE LR YLNLPSEIVPATLKK A+P GR
Subjt:  MIIPEKNRKEISKYLFQEGVCYAKKDYNLAKHPEIDVPNLQVIKLMQSFKSKEYVRETFAWMHYYWYLTNDGIEFLRTYLNLPSEIVPATLKKQAKPAGR

Query:  PFG-GPSGDRPRGPSRFDGER-RFGDRDGYRGGSRGPGGDF-GDKGGAPADYRPSFGGPGGRPGFGR-GAGGYGGAPAPSNLE
        PFG GP GDRPRGP RF+G+R RFGDRDGYRGG RG  GDF G+KGGAPA+++PSF   GGRPGFGR G GG+G  P  S++E
Subjt:  PFG-GPSGDRPRGPSRFDGER-RFGDRDGYRGGSRGPGGDF-GDKGGAPADYRPSFGGPGGRPGFGR-GAGGYGGAPAPSNLE

Q9FFS8 40S ribosomal protein S10-23.0e-6978.45Show/hide
Query:  MIIPEKNRKEISKYLFQEGVCYAKKDYNLAKHPEID-VPNLQVIKLMQSFKSKEYVRETFAWMHYYWYLTNDGIEFLRTYLNLPSEIVPATLKKQAKPAG
        MII E NR+EISKYLF+EGV +AKKD+NL +HP I+ VPNLQVIKLMQSFKSKEYVRETFAWMHYYW+LTN+GI+FLRTYLNLPSEIVPATLKKQ KP G
Subjt:  MIIPEKNRKEISKYLFQEGVCYAKKDYNLAKHPEID-VPNLQVIKLMQSFKSKEYVRETFAWMHYYWYLTNDGIEFLRTYLNLPSEIVPATLKKQAKPAG

Query:  RPFGGPSGDRPRGPSRFDGERRFGDRDGYRGGSRGPGGDFGDKGGAPADYRPSF-GGPGG-RPGFGRGAGGYGGAPAPSNL
        RPFGG  GDRPRGP R DGERRFGDRDGYRGG +  GG++GDK GAPADY+P F GG GG R GFGRGAGG+GG  A S+L
Subjt:  RPFGGPSGDRPRGPSRFDGERRFGDRDGYRGGSRGPGGDFGDKGGAPADYRPSF-GGPGG-RPGFGRGAGGYGGAPAPSNL

Q9LTF2 40S ribosomal protein S10-34.4e-6878.53Show/hide
Query:  MIIPEKNRKEISKYLFQEGVCYAKKDYNLAKHPEIDVPNLQVIKLMQSFKSKEYVRETFAWMHYYWYLTNDGIEFLRTYLNLPSEIVPATLKKQAKPAGR
        MII E NRKEI KYLF+EGVC+AKKD+NLAKHP IDVPNLQVIKLMQSFKSKEYVRETFAWMHYYW+LTN+GIEFLRTYLNLPS++VPATLKK AKP GR
Subjt:  MIIPEKNRKEISKYLFQEGVCYAKKDYNLAKHPEIDVPNLQVIKLMQSFKSKEYVRETFAWMHYYWYLTNDGIEFLRTYLNLPSEIVPATLKKQAKPAGR

Query:  PFGGPSGDRPRGPSRFDGER-RFGDRDGYRGGSRGPGGDFGDKGGAPADYRPSFGGPGGRPGFGRGAGGYGGAPAPS
        PFGGP GDR RGP    G+R RFGDRDGYR G R  G   G+KGGAPADY+PSF G G   GFGRGAGGY  A APS
Subjt:  PFGGPSGDRPRGPSRFDGER-RFGDRDGYRGGSRGPGGDFGDKGGAPADYRPSFGGPGGRPGFGRGAGGYGGAPAPS

Q9SW09 40S ribosomal protein S10-11.1e-7180.79Show/hide
Query:  MIIPEKNRKEISKYLFQEGVCYAKKDYNLAKHPEIDVPNLQVIKLMQSFKSKEYVRETFAWMHYYWYLTNDGIEFLRTYLNLPSEIVPATLKKQAKPAGR
        MII E NR+EI KYLF+EGVC+AKKD+NL KHP IDVPNLQVIKLMQSFKSKEYVRETFAWMHYYW+LTN+GIEFLRTYLNLPS++VPATLKK AKP GR
Subjt:  MIIPEKNRKEISKYLFQEGVCYAKKDYNLAKHPEIDVPNLQVIKLMQSFKSKEYVRETFAWMHYYWYLTNDGIEFLRTYLNLPSEIVPATLKKQAKPAGR

Query:  PFGGPSGDRPRGPSRFDGER-RFGDRDGYRGGSRGPGGDFGDKGGAPADYRPSFGGPGGRPGFGRGAGGYGGAPAPS
        PFGGP GDR RGP R DG+R RFGDRDGYRGG R  GGD  +KGGAPAD++PSF G GGRPGFGRGAGGY  A APS
Subjt:  PFGGPSGDRPRGPSRFDGER-RFGDRDGYRGGSRGPGGDFGDKGGAPADYRPSFGGPGGRPGFGRGAGGYGGAPAPS

Arabidopsis top hitse value%identityAlignment
AT4G25740.1 RNA binding Plectin/S10 domain-containing protein8.0e-7380.79Show/hide
Query:  MIIPEKNRKEISKYLFQEGVCYAKKDYNLAKHPEIDVPNLQVIKLMQSFKSKEYVRETFAWMHYYWYLTNDGIEFLRTYLNLPSEIVPATLKKQAKPAGR
        MII E NR+EI KYLF+EGVC+AKKD+NL KHP IDVPNLQVIKLMQSFKSKEYVRETFAWMHYYW+LTN+GIEFLRTYLNLPS++VPATLKK AKP GR
Subjt:  MIIPEKNRKEISKYLFQEGVCYAKKDYNLAKHPEIDVPNLQVIKLMQSFKSKEYVRETFAWMHYYWYLTNDGIEFLRTYLNLPSEIVPATLKKQAKPAGR

Query:  PFGGPSGDRPRGPSRFDGER-RFGDRDGYRGGSRGPGGDFGDKGGAPADYRPSFGGPGGRPGFGRGAGGYGGAPAPS
        PFGGP GDR RGP R DG+R RFGDRDGYRGG R  GGD  +KGGAPAD++PSF G GGRPGFGRGAGGY  A APS
Subjt:  PFGGPSGDRPRGPSRFDGER-RFGDRDGYRGGSRGPGGDFGDKGGAPADYRPSFGGPGGRPGFGRGAGGYGGAPAPS

AT4G25740.2 RNA binding Plectin/S10 domain-containing protein8.5e-5968.75Show/hide
Query:  MIIPEKNRKEISKYLFQEGVCYAKKDYNLAKHPEIDVPNLQVIKLMQSFKSKEYVRETFAWMHYYWYLTNDGIEFLRTYLNLPSEIVPATLKKQAKPAGR
        MII E NR+EI KYLF+EGVC+AKKD+NL KHP IDVPNLQVIKLMQSFKSKEYVRETFAWMHYYW+LTN+GIEFLRTYLNLPS++VPATLKK AKP GR
Subjt:  MIIPEKNRKEISKYLFQEGVCYAKKDYNLAKHPEIDVPNLQVIKLMQSFKSKEYVRETFAWMHYYWYLTNDGIEFLRTYLNLPSEIVPATLKKQAKPAGR

Query:  PFGGPSGDRPRGPSRFDGERRFGDRDGYRGGSRGPGGDFGDKGGAPADYRPSFGGPGGRPGFGRGAGGYGGAPAPS
        PFGGP                              GGD  +KGGAPAD++PSF G GGRPGFGRGAGGY  A APS
Subjt:  PFGGPSGDRPRGPSRFDGERRFGDRDGYRGGSRGPGGDFGDKGGAPADYRPSFGGPGGRPGFGRGAGGYGGAPAPS

AT5G41520.1 RNA binding Plectin/S10 domain-containing protein2.2e-7078.45Show/hide
Query:  MIIPEKNRKEISKYLFQEGVCYAKKDYNLAKHPEID-VPNLQVIKLMQSFKSKEYVRETFAWMHYYWYLTNDGIEFLRTYLNLPSEIVPATLKKQAKPAG
        MII E NR+EISKYLF+EGV +AKKD+NL +HP I+ VPNLQVIKLMQSFKSKEYVRETFAWMHYYW+LTN+GI+FLRTYLNLPSEIVPATLKKQ KP G
Subjt:  MIIPEKNRKEISKYLFQEGVCYAKKDYNLAKHPEID-VPNLQVIKLMQSFKSKEYVRETFAWMHYYWYLTNDGIEFLRTYLNLPSEIVPATLKKQAKPAG

Query:  RPFGGPSGDRPRGPSRFDGERRFGDRDGYRGGSRGPGGDFGDKGGAPADYRPSF-GGPGG-RPGFGRGAGGYGGAPAPSNL
        RPFGG  GDRPRGP R DGERRFGDRDGYRGG +  GG++GDK GAPADY+P F GG GG R GFGRGAGG+GG  A S+L
Subjt:  RPFGGPSGDRPRGPSRFDGERRFGDRDGYRGGSRGPGGDFGDKGGAPADYRPSF-GGPGG-RPGFGRGAGGYGGAPAPSNL

AT5G41520.2 RNA binding Plectin/S10 domain-containing protein2.9e-5180Show/hide
Query:  MQSFKSKEYVRETFAWMHYYWYLTNDGIEFLRTYLNLPSEIVPATLKKQAKPAGRPFGGPSGDRPRGPSRFDGERRFGDRDGYRGGSRGPGGDFGDKGGA
        MQSFKSKEYVRETFAWMHYYW+LTN+GI+FLRTYLNLPSEIVPATLKKQ KP GRPFGG  GDRPRGP R DGERRFGDRDGYRGG +  GG++GDK GA
Subjt:  MQSFKSKEYVRETFAWMHYYWYLTNDGIEFLRTYLNLPSEIVPATLKKQAKPAGRPFGGPSGDRPRGPSRFDGERRFGDRDGYRGGSRGPGGDFGDKGGA

Query:  PADYRPSF-GGPGG-RPGFGRGAGGYGGAPAPSNL
        PADY+P F GG GG R GFGRGAGG+GG  A S+L
Subjt:  PADYRPSF-GGPGG-RPGFGRGAGGYGGAPAPSNL

AT5G52650.1 RNA binding Plectin/S10 domain-containing protein3.1e-6978.53Show/hide
Query:  MIIPEKNRKEISKYLFQEGVCYAKKDYNLAKHPEIDVPNLQVIKLMQSFKSKEYVRETFAWMHYYWYLTNDGIEFLRTYLNLPSEIVPATLKKQAKPAGR
        MII E NRKEI KYLF+EGVC+AKKD+NLAKHP IDVPNLQVIKLMQSFKSKEYVRETFAWMHYYW+LTN+GIEFLRTYLNLPS++VPATLKK AKP GR
Subjt:  MIIPEKNRKEISKYLFQEGVCYAKKDYNLAKHPEIDVPNLQVIKLMQSFKSKEYVRETFAWMHYYWYLTNDGIEFLRTYLNLPSEIVPATLKKQAKPAGR

Query:  PFGGPSGDRPRGPSRFDGER-RFGDRDGYRGGSRGPGGDFGDKGGAPADYRPSFGGPGGRPGFGRGAGGYGGAPAPS
        PFGGP GDR RGP    G+R RFGDRDGYR G R  G   G+KGGAPADY+PSF G G   GFGRGAGGY  A APS
Subjt:  PFGGPSGDRPRGPSRFDGER-RFGDRDGYRGGSRGPGGDFGDKGGAPADYRPSFGGPGGRPGFGRGAGGYGGAPAPS


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGATCATTCCAGAGAAGAATCGCAAAGAAATTTCCAAGTACCTCTTTCAAGAGGGAGTTTGCTATGCCAAGAAGGACTACAATCTGGCCAAGCACCCGGAAATCGATGT
GCCAAATTTGCAAGTGATTAAGCTGATGCAGAGCTTCAAATCTAAGGAGTATGTTCGCGAGACGTTTGCGTGGATGCATTACTACTGGTACCTCACAAACGATGGCATTG
AGTTTTTGAGGACTTACCTGAATCTCCCTTCAGAAATTGTCCCGGCTACCTTGAAGAAACAAGCCAAGCCCGCTGGTCGACCATTTGGTGGCCCATCTGGAGACCGCCCA
CGTGGTCCTTCAAGATTTGATGGAGAAAGAAGATTTGGTGACCGAGATGGCTACCGTGGAGGTTCTCGTGGGCCTGGTGGTGATTTCGGTGATAAGGGTGGAGCCCCTGC
TGATTACAGACCTTCATTCGGGGGTCCTGGCGGAAGGCCTGGCTTTGGCCGTGGAGCTGGTGGTTATGGGGGAGCACCTGCACCGTCAAATCTTGAATGA
mRNA sequenceShow/hide mRNA sequence
AATGTTTCAGAGATTTAGGGCTTTACGCTGTGAAGGAAGATTGTGAAAGGGTTTCTCTCTTAGCTGCCGCTTCTTCCTGCCGCCGCCGTCGTCACCGATCACTTCGTCAA
AATGATCATTCCAGAGAAGAATCGCAAAGAAATTTCCAAGTACCTCTTTCAAGAGGGAGTTTGCTATGCCAAGAAGGACTACAATCTGGCCAAGCACCCGGAAATCGATG
TGCCAAATTTGCAAGTGATTAAGCTGATGCAGAGCTTCAAATCTAAGGAGTATGTTCGCGAGACGTTTGCGTGGATGCATTACTACTGGTACCTCACAAACGATGGCATT
GAGTTTTTGAGGACTTACCTGAATCTCCCTTCAGAAATTGTCCCGGCTACCTTGAAGAAACAAGCCAAGCCCGCTGGTCGACCATTTGGTGGCCCATCTGGAGACCGCCC
ACGTGGTCCTTCAAGATTTGATGGAGAAAGAAGATTTGGTGACCGAGATGGCTACCGTGGAGGTTCTCGTGGGCCTGGTGGTGATTTCGGTGATAAGGGTGGAGCCCCTG
CTGATTACAGACCTTCATTCGGGGGTCCTGGCGGAAGGCCTGGCTTTGGCCGTGGAGCTGGTGGTTATGGGGGAGCACCTGCACCGTCAAATCTTGAATGAACGAACAAC
ATAGGTGTATGGGAGTGTTTTTGTTAGTTTTAGTTTCTAAGCAAATTGAATCAAAGATGTTGAATTAAAACTCATGAGATCTTATCAGTTTTGTTTGCCTATAATTAATT
GTTGGATCTTTGGTTACTGAACTCTGTTTGATGCCTTCTTTTACAGATTCCTATAATCCTCTTCACACTTCTTTTATATTATGGAATTCATTAACTTATTTCTGAAGCAT
TCTAGCCTCATTTTC
Protein sequenceShow/hide protein sequence
MIIPEKNRKEISKYLFQEGVCYAKKDYNLAKHPEIDVPNLQVIKLMQSFKSKEYVRETFAWMHYYWYLTNDGIEFLRTYLNLPSEIVPATLKKQAKPAGRPFGGPSGDRP
RGPSRFDGERRFGDRDGYRGGSRGPGGDFGDKGGAPADYRPSFGGPGGRPGFGRGAGGYGGAPAPSNLE