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MELO3C005941 (gene) of Melon (DHL92) v4 genome

Gene IDMELO3C005941
OrganismCucumis melo DHL92 (Melon (DHL92) v4)
DescriptionAP2/ERF transcription factor
Genome locationchr06:90312..90989
RNA-Seq ExpressionMELO3C005941
SyntenyMELO3C005941
Gene Ontology termsGO:0006355 - regulation of transcription, DNA-templated (biological process)
GO:0009873 - ethylene-activated signaling pathway (biological process)
GO:0005634 - nucleus (cellular component)
GO:0003677 - DNA binding (molecular function)
GO:0003700 - DNA-binding transcription factor activity (molecular function)
InterPro domainsIPR001471 - AP2/ERF domain
IPR016177 - DNA-binding domain superfamily
IPR036955 - AP2/ERF domain superfamily
IPR044808 - Ethylene-responsive transcription factor


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0048804.1 putative Ethylene-responsive element binding factor 13 [Cucumis melo var. makuwa]3.2e-80100Show/hide
Query:  MLSSSSSSSSLEGSSSDLFLLEQIRRHLLEDDLGKGSTNNNVEDGIIRYDISCSGAGWEMSNNNNNNMVDQMSSIIIRDNPEEKSRPRGLQFRGVRRRPW
        MLSSSSSSSSLEGSSSDLFLLEQIRRHLLEDDLGKGSTNNNVEDGIIRYDISCSGAGWEMSNNNNNNMVDQMSSIIIRDNPEEKSRPRGLQFRGVRRRPW
Subjt:  MLSSSSSSSSLEGSSSDLFLLEQIRRHLLEDDLGKGSTNNNVEDGIIRYDISCSGAGWEMSNNNNNNMVDQMSSIIIRDNPEEKSRPRGLQFRGVRRRPW

Query:  GKYAAEIRDPSRKGARIWLGTYHTAQDAALAYDRAAFQMRGAKAKLNFPHIISSNN
        GKYAAEIRDPSRKGARIWLGTYHTAQDAALAYDRAAFQMRGAKAKLNFPHIISSNN
Subjt:  GKYAAEIRDPSRKGARIWLGTYHTAQDAALAYDRAAFQMRGAKAKLNFPHIISSNN

KAE8650208.1 hypothetical protein Csa_010866 [Cucumis sativus]2.2e-5277.27Show/hide
Query:  SSSSSSLEGSSSDLFLLEQIRRHLLEDDLGKGSTNNNVEDGIIRYDISCSGAGWEMSNNNNNNMVDQMSSIIIRDNPEEKS--RPRGLQFRGVRRRPWGK
        SSSSSSLEGSSSDLF LEQIRRHLLEDDLGKGST+NNVEDG                              IIRDNPEEKS  RPRGLQFRGVRRRPWGK
Subjt:  SSSSSSLEGSSSDLFLLEQIRRHLLEDDLGKGSTNNNVEDGIIRYDISCSGAGWEMSNNNNNNMVDQMSSIIIRDNPEEKS--RPRGLQFRGVRRRPWGK

Query:  YAAEIRDPSRKGARIWLGTYHTAQDAALAYDRAAFQMRGAKAKLNFPHIISSNN
        YAAEIRDPS+KGARIWLGTYHTAQDAALAYDRAAFQMRGAKAKLNFPHIISSNN
Subjt:  YAAEIRDPSRKGARIWLGTYHTAQDAALAYDRAAFQMRGAKAKLNFPHIISSNN

XP_004134277.2 ethylene-responsive transcription factor 1 [Cucumis sativus]5.5e-7295.45Show/hide
Query:  SSSSSSLEGSSSDLFLLEQIRRHLLEDDLGKGSTNNNVEDGIIRYDISCSGAGWEMSNNNNNNMVDQMSSIIIRDNPEEKS--RPRGLQFRGVRRRPWGK
        SSSSSSLEGSSSDLF LEQIRRHLLEDDLGKGST+NNVEDGIIRYDIS SGAGWEMS NNNNNMVDQMSSIIIRDNPEEKS  RPRGLQFRGVRRRPWGK
Subjt:  SSSSSSLEGSSSDLFLLEQIRRHLLEDDLGKGSTNNNVEDGIIRYDISCSGAGWEMSNNNNNNMVDQMSSIIIRDNPEEKS--RPRGLQFRGVRRRPWGK

Query:  YAAEIRDPSRKGARIWLGTYHTAQDAALAYDRAAFQMRGAKAKLNFPHIISSNN
        YAAEIRDPS+KGARIWLGTYHTAQDAALAYDRAAFQMRGAKAKLNFPHIISSNN
Subjt:  YAAEIRDPSRKGARIWLGTYHTAQDAALAYDRAAFQMRGAKAKLNFPHIISSNN

XP_022974259.1 ethylene-responsive transcription factor 13-like [Cucurbita maxima]3.0e-3358.71Show/hide
Query:  SSSSSSSLEGSSSDLFLLEQIRRHLLEDDL----GKGSTNNNVEDGIIRYDISCSGAGWEMSNNNNNNMVDQMSSIIIRDNPEEKSRPRGLQFRGVRRRP
        SS+S+ S   SSS++FLLE IRRHLLED+L    G G    +++ G    DI   G G               SSI            RGLQFRGVRRRP
Subjt:  SSSSSSSLEGSSSDLFLLEQIRRHLLEDDL----GKGSTNNNVEDGIIRYDISCSGAGWEMSNNNNNNMVDQMSSIIIRDNPEEKSRPRGLQFRGVRRRP

Query:  WGKYAAEIRDPSRKGARIWLGTYHTAQDAALAYDRAAFQMRGAKAKLNFPHIISS
        WGKYAAEIRDP+RKGARIWLGTY TA++AALAYDRAAFQMRGAKAKLNFPH+I S
Subjt:  WGKYAAEIRDPSRKGARIWLGTYHTAQDAALAYDRAAFQMRGAKAKLNFPHIISS

XP_023539438.1 ethylene-responsive transcription factor 13-like [Cucurbita pepo subsp. pepo]1.3e-3358Show/hide
Query:  SSSSSSLEGSSSDLFLLEQIRRHLLEDDLGKGSTNNNVEDGIIRYDISCSGAGWEMSNNNNNNMVDQMSSIIIRDNPEEKSRPRGLQFRGVRRRPWGKYA
        SS+S+  +GSSS++FLLE IRRHLLED+L                  S  G G       N   +  +  +   + P + S  RGLQFRGVRRRPWGKYA
Subjt:  SSSSSSLEGSSSDLFLLEQIRRHLLEDDLGKGSTNNNVEDGIIRYDISCSGAGWEMSNNNNNNMVDQMSSIIIRDNPEEKSRPRGLQFRGVRRRPWGKYA

Query:  AEIRDPSRKGARIWLGTYHTAQDAALAYDRAAFQMRGAKAKLNFPHIISS
        AEIRDP+RKGARIWLGTY TA++AALAYDRAAFQMRGAKAKLNFPH+I S
Subjt:  AEIRDPSRKGARIWLGTYHTAQDAALAYDRAAFQMRGAKAKLNFPHIISS

TrEMBL top hitse value%identityAlignment
A0A0A0L893 AP2/ERF domain-containing protein2.7e-7295.45Show/hide
Query:  SSSSSSLEGSSSDLFLLEQIRRHLLEDDLGKGSTNNNVEDGIIRYDISCSGAGWEMSNNNNNNMVDQMSSIIIRDNPEEKS--RPRGLQFRGVRRRPWGK
        SSSSSSLEGSSSDLF LEQIRRHLLEDDLGKGST+NNVEDGIIRYDIS SGAGWEMS NNNNNMVDQMSSIIIRDNPEEKS  RPRGLQFRGVRRRPWGK
Subjt:  SSSSSSLEGSSSDLFLLEQIRRHLLEDDLGKGSTNNNVEDGIIRYDISCSGAGWEMSNNNNNNMVDQMSSIIIRDNPEEKS--RPRGLQFRGVRRRPWGK

Query:  YAAEIRDPSRKGARIWLGTYHTAQDAALAYDRAAFQMRGAKAKLNFPHIISSNN
        YAAEIRDPS+KGARIWLGTYHTAQDAALAYDRAAFQMRGAKAKLNFPHIISSNN
Subjt:  YAAEIRDPSRKGARIWLGTYHTAQDAALAYDRAAFQMRGAKAKLNFPHIISSNN

A0A5D3DAY8 Putative Ethylene-responsive element binding factor 131.6e-80100Show/hide
Query:  MLSSSSSSSSLEGSSSDLFLLEQIRRHLLEDDLGKGSTNNNVEDGIIRYDISCSGAGWEMSNNNNNNMVDQMSSIIIRDNPEEKSRPRGLQFRGVRRRPW
        MLSSSSSSSSLEGSSSDLFLLEQIRRHLLEDDLGKGSTNNNVEDGIIRYDISCSGAGWEMSNNNNNNMVDQMSSIIIRDNPEEKSRPRGLQFRGVRRRPW
Subjt:  MLSSSSSSSSLEGSSSDLFLLEQIRRHLLEDDLGKGSTNNNVEDGIIRYDISCSGAGWEMSNNNNNNMVDQMSSIIIRDNPEEKSRPRGLQFRGVRRRPW

Query:  GKYAAEIRDPSRKGARIWLGTYHTAQDAALAYDRAAFQMRGAKAKLNFPHIISSNN
        GKYAAEIRDPSRKGARIWLGTYHTAQDAALAYDRAAFQMRGAKAKLNFPHIISSNN
Subjt:  GKYAAEIRDPSRKGARIWLGTYHTAQDAALAYDRAAFQMRGAKAKLNFPHIISSNN

A0A6J1GF81 ethylene-responsive transcription factor 1-like2.4e-3358.6Show/hide
Query:  SSSSSSSLEGSSSDLFLLEQIRRHLLEDD------LGKGSTNNNVEDGIIRYDISCSGAGWEMSNNNNNNMVDQMSSIIIRDNPEEKSRPRGLQFRGVRR
        SS+S+ S   SSS++FLLE IRRHLLED+      LGK + +    DG+   DI   G G               SSI            RGLQFRGVRR
Subjt:  SSSSSSSLEGSSSDLFLLEQIRRHLLEDD------LGKGSTNNNVEDGIIRYDISCSGAGWEMSNNNNNNMVDQMSSIIIRDNPEEKSRPRGLQFRGVRR

Query:  RPWGKYAAEIRDPSRKGARIWLGTYHTAQDAALAYDRAAFQMRGAKAKLNFPHIISS
        RPWGKYAAEIRDP+RKGARIWLGTY TA++AALAYDRAAFQMRGAKAKLNFPH+I S
Subjt:  RPWGKYAAEIRDPSRKGARIWLGTYHTAQDAALAYDRAAFQMRGAKAKLNFPHIISS

A0A6J1IH30 ethylene-responsive transcription factor 13-like1.4e-3358.71Show/hide
Query:  SSSSSSSLEGSSSDLFLLEQIRRHLLEDDL----GKGSTNNNVEDGIIRYDISCSGAGWEMSNNNNNNMVDQMSSIIIRDNPEEKSRPRGLQFRGVRRRP
        SS+S+ S   SSS++FLLE IRRHLLED+L    G G    +++ G    DI   G G               SSI            RGLQFRGVRRRP
Subjt:  SSSSSSSLEGSSSDLFLLEQIRRHLLEDDL----GKGSTNNNVEDGIIRYDISCSGAGWEMSNNNNNNMVDQMSSIIIRDNPEEKSRPRGLQFRGVRRRP

Query:  WGKYAAEIRDPSRKGARIWLGTYHTAQDAALAYDRAAFQMRGAKAKLNFPHIISS
        WGKYAAEIRDP+RKGARIWLGTY TA++AALAYDRAAFQMRGAKAKLNFPH+I S
Subjt:  WGKYAAEIRDPSRKGARIWLGTYHTAQDAALAYDRAAFQMRGAKAKLNFPHIISS

A0A6J5TZJ7 AP2/ERF domain-containing protein4.0e-2849.68Show/hide
Query:  SSSDLFLLEQIRRHLLEDDLGKGST--NNNVEDGIIRYDISCSGAGWEMSNNNNNNMVDQMSSIIIRDNPEEKSR------------PRGLQFRGVRRRP
        +SS+  LLE IR+HLLEDD    +T   +  ED    YD + S +    S++ +  +     +I I D+  ++S+            P G  FRGVRRRP
Subjt:  SSSDLFLLEQIRRHLLEDDLGKGST--NNNVEDGIIRYDISCSGAGWEMSNNNNNNMVDQMSSIIIRDNPEEKSR------------PRGLQFRGVRRRP

Query:  WGKYAAEIRDPSRKGARIWLGTYHTAQDAALAYDRAAFQMRGAKAKLNFPHIISSNN
        WGKYAAEIRDP++ GAR+WLGTY TA+DA+LAYDRAAF+MRG+KAKLNFPH+I S++
Subjt:  WGKYAAEIRDPSRKGARIWLGTYHTAQDAALAYDRAAFQMRGAKAKLNFPHIISSNN

SwissProt top hitse value%identityAlignment
Q40476 Ethylene-responsive transcription factor 13.8e-2351.43Show/hide
Query:  GWEMSNNNNNNMVDQMSSIIIRDNPEEKSR------PRGLQFRGVRRRPWGKYAAEIRDPSRKGARIWLGTYHTAQDAALAYDRAAFQMRGAKAKLNFPH
        GW   N +   +  +     I  +P E +       PRG  +RGVRRRPWGK+AAEIRDP++ GAR+WLGTY T ++AA+AYD+AA++MRG+KA LNFPH
Subjt:  GWEMSNNNNNNMVDQMSSIIIRDNPEEKSR------PRGLQFRGVRRRPWGKYAAEIRDPSRKGARIWLGTYHTAQDAALAYDRAAFQMRGAKAKLNFPH

Query:  IISSN
         I  N
Subjt:  IISSN

Q40479 Ethylene-responsive transcription factor 29.9e-2469.57Show/hide
Query:  PRGLQFRGVRRRPWGKYAAEIRDPSRKGARIWLGTYHTAQDAALAYDRAAFQMRGAKAKLNFPHIISSN
        P+G  +RGVR+RPWGK+AAEIRDP++ GAR+WLGTY TA++AALAYD+AA++MRG+KA LNFPH I  N
Subjt:  PRGLQFRGVRRRPWGKYAAEIRDPSRKGARIWLGTYHTAQDAALAYDRAAFQMRGAKAKLNFPHIISSN

Q84XB3 Ethylene-responsive transcription factor 11.1e-2267.14Show/hide
Query:  RPRGLQFRGVRRRPWGKYAAEIRDPSRKGARIWLGTYHTAQDAALAYDRAAFQMRGAKAKLNFPHIISSN
        +P+G  +RGVR+RPWGK+AAEIRDP++ GAR+WLGTY +A++AALAY +AAF+MRG KA LNFPH I  N
Subjt:  RPRGLQFRGVRRRPWGKYAAEIRDPSRKGARIWLGTYHTAQDAALAYDRAAFQMRGAKAKLNFPHIISSN

Q8L9K1 Ethylene-responsive transcription factor 136.2e-2655.56Show/hide
Query:  AGWEMSNNNNNNMVDQMSSIIIRDNPEEKSRPRGLQFRGVRRRPWGKYAAEIRDPSRKGARIWLGTYHTAQDAALAYDRAAFQMRGAKAKLNFPHIISS
        +GW  S     +  ++      + +     R +G+Q+RGVRRRPWGK+AAEIRDP + GAR+WLGTY T +DAA+AYDRAAFQ+RG+KAKLNFPH+I S
Subjt:  AGWEMSNNNNNNMVDQMSSIIIRDNPEEKSRPRGLQFRGVRRRPWGKYAAEIRDPSRKGARIWLGTYHTAQDAALAYDRAAFQMRGAKAKLNFPHIISS

Q9LW50 Ethylene-responsive transcription factor 29.9e-2469.57Show/hide
Query:  PRGLQFRGVRRRPWGKYAAEIRDPSRKGARIWLGTYHTAQDAALAYDRAAFQMRGAKAKLNFPHIISSN
        P+G  +RGVR+RPWGK+AAEIRDP++ GAR+WLGTY TA++AALAYD+AA++MRG+KA LNFPH I  N
Subjt:  PRGLQFRGVRRRPWGKYAAEIRDPSRKGARIWLGTYHTAQDAALAYDRAAFQMRGAKAKLNFPHIISSN

Arabidopsis top hitse value%identityAlignment
AT2G33710.1 Integrase-type DNA-binding superfamily protein8.6e-2361.63Show/hide
Query:  DQMSSIIIRDNPEEKSRPRGLQFRGVRRRPWGKYAAEIRDPSRKGARIWLGTYHTAQDAALAYDRAAFQMRGAKAKLNFPHIISSN
        DQ SS+ +    +EKS  R   +RGVR+RPWGK+AAEIRDP+ K AR+WLGT+ TA++AALAYD+AAF+ RG KAKLNFP  I  N
Subjt:  DQMSSIIIRDNPEEKSRPRGLQFRGVRRRPWGKYAAEIRDPSRKGARIWLGTYHTAQDAALAYDRAAFQMRGAKAKLNFPHIISSN

AT2G33710.2 Integrase-type DNA-binding superfamily protein8.6e-2361.63Show/hide
Query:  DQMSSIIIRDNPEEKSRPRGLQFRGVRRRPWGKYAAEIRDPSRKGARIWLGTYHTAQDAALAYDRAAFQMRGAKAKLNFPHIISSN
        DQ SS+ +    +EKS  R   +RGVR+RPWGK+AAEIRDP+ K AR+WLGT+ TA++AALAYD+AAF+ RG KAKLNFP  I  N
Subjt:  DQMSSIIIRDNPEEKSRPRGLQFRGVRRRPWGKYAAEIRDPSRKGARIWLGTYHTAQDAALAYDRAAFQMRGAKAKLNFPHIISSN

AT2G44840.1 ethylene-responsive element binding factor 134.4e-2755.56Show/hide
Query:  AGWEMSNNNNNNMVDQMSSIIIRDNPEEKSRPRGLQFRGVRRRPWGKYAAEIRDPSRKGARIWLGTYHTAQDAALAYDRAAFQMRGAKAKLNFPHIISS
        +GW  S     +  ++      + +     R +G+Q+RGVRRRPWGK+AAEIRDP + GAR+WLGTY T +DAA+AYDRAAFQ+RG+KAKLNFPH+I S
Subjt:  AGWEMSNNNNNNMVDQMSSIIIRDNPEEKSRPRGLQFRGVRRRPWGKYAAEIRDPSRKGARIWLGTYHTAQDAALAYDRAAFQMRGAKAKLNFPHIISS

AT3G23220.1 Integrase-type DNA-binding superfamily protein4.3e-2273.77Show/hide
Query:  LQFRGVRRRPWGKYAAEIRDPSRKGARIWLGTYHTAQDAALAYDRAAFQMRGAKAKLNFPH
        +++RGVR+RPWGKYAAEIRD +R GAR+WLGT++TA+DAA AYDRAAF MRG +A LNFPH
Subjt:  LQFRGVRRRPWGKYAAEIRDPSRKGARIWLGTYHTAQDAALAYDRAAFQMRGAKAKLNFPH

AT4G17500.1 ethylene responsive element binding factor 13.9e-2368.66Show/hide
Query:  RGLQFRGVRRRPWGKYAAEIRDPSRKGARIWLGTYHTAQDAALAYDRAAFQMRGAKAKLNFPHIISS
        +G  +RGVR+RPWGK+AAEIRDP++ GAR+WLGT+ TA+DAALAYDRAAF+MRG++A LNFP  ++S
Subjt:  RGLQFRGVRRRPWGKYAAEIRDPSRKGARIWLGTYHTAQDAALAYDRAAFQMRGAKAKLNFPHIISS


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTTGAGCAGCAGCAGCAGCAGCAGCAGCTTGGAAGGGTCGTCGTCGGATTTATTTCTTTTGGAGCAGATTCGGCGGCATCTTCTAGAAGACGACTTAGGGAAAGGGAG
TACCAATAATAATGTTGAGGATGGAATAATAAGGTATGATATTAGTTGTAGTGGAGCTGGTTGGGAGATGAGTAACAACAACAACAACAATATGGTGGATCAAATGTCGT
CAATTATTATTAGAGACAATCCGGAAGAGAAGTCTCGGCCTCGAGGTTTGCAGTTCAGAGGAGTTAGGAGGAGGCCTTGGGGGAAGTACGCGGCAGAAATCAGAGACCCG
AGCAGAAAAGGAGCTCGAATATGGCTGGGGACTTACCACACCGCCCAAGACGCTGCTTTAGCTTACGATCGAGCTGCTTTTCAGATGCGAGGGGCCAAAGCTAAACTCAA
CTTCCCTCACATCATTTCTTCTAACAACTAA
mRNA sequenceShow/hide mRNA sequence
ATACAGAGAATACACAGTGTGGTAGTGTGGTTCCTTCTAATAACAATAAACCAAAGAAGAATTAGAAGCAGAAAAATCATGTTGAGCAGCAGCAGCAGCAGCAGCAGCTT
GGAAGGGTCGTCGTCGGATTTATTTCTTTTGGAGCAGATTCGGCGGCATCTTCTAGAAGACGACTTAGGGAAAGGGAGTACCAATAATAATGTTGAGGATGGAATAATAA
GGTATGATATTAGTTGTAGTGGAGCTGGTTGGGAGATGAGTAACAACAACAACAACAATATGGTGGATCAAATGTCGTCAATTATTATTAGAGACAATCCGGAAGAGAAG
TCTCGGCCTCGAGGTTTGCAGTTCAGAGGAGTTAGGAGGAGGCCTTGGGGGAAGTACGCGGCAGAAATCAGAGACCCGAGCAGAAAAGGAGCTCGAATATGGCTGGGGAC
TTACCACACCGCCCAAGACGCTGCTTTAGCTTACGATCGAGCTGCTTTTCAGATGCGAGGGGCCAAAGCTAAACTCAACTTCCCTCACATCATTTCTTCTAACAACTAAT
TAACTCCAAATTCAACTTATTCTACTCTTCCGTTCCATCACCCTTTTATTTCTCAACCTGGCCCTTCACAAATTATAATCTCCATTATTTTCTATCTCTACATATATATT
AAGATCAGTCATCTCCAT
Protein sequenceShow/hide protein sequence
MLSSSSSSSSLEGSSSDLFLLEQIRRHLLEDDLGKGSTNNNVEDGIIRYDISCSGAGWEMSNNNNNNMVDQMSSIIIRDNPEEKSRPRGLQFRGVRRRPWGKYAAEIRDP
SRKGARIWLGTYHTAQDAALAYDRAAFQMRGAKAKLNFPHIISSNN