; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

MELO3C006002 (gene) of Melon (DHL92) v4 genome

Gene IDMELO3C006002
OrganismCucumis melo DHL92 (Melon (DHL92) v4)
Descriptionserine/arginine-rich splicing factor RS31-like
Genome locationchr06:490293..493674
RNA-Seq ExpressionMELO3C006002
SyntenyMELO3C006002
Gene Ontology termsGO:0000398 - mRNA splicing, via spliceosome (biological process)
GO:0005681 - spliceosomal complex (cellular component)
GO:0016607 - nuclear speck (cellular component)
GO:0003723 - RNA binding (molecular function)
InterPro domainsIPR000504 - RNA recognition motif domain
IPR012677 - Nucleotide-binding alpha-beta plait domain superfamily
IPR029537 - Arginine/serine-rich-splicing factor RSP31/31A
IPR035979 - RNA-binding domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAE8650222.1 hypothetical protein Csa_011015 [Cucumis sativus]7.1e-12199.54Show/hide
Query:  AGFAFVYFEDERDAEDAIRGLDNLPFGYDRRRLSVEWARGERGRHRDGSKSMANQRPTKTLFVINFDPIRTRVRDIERHFEPYGKVLNVRIRRNFAFVQF
        +GFAFVYFEDERDAEDAIRGLDNLPFGYDRRRLSVEWARGERGRHRDGSKSMANQRPTKTLFVINFDPIRTRVRDIERHFEPYGKVLNVRIRRNFAFVQF
Subjt:  AGFAFVYFEDERDAEDAIRGLDNLPFGYDRRRLSVEWARGERGRHRDGSKSMANQRPTKTLFVINFDPIRTRVRDIERHFEPYGKVLNVRIRRNFAFVQF

Query:  ETQEDATKALECTHMSKILDRVVSVEYALRDDGERGDPFDESPRRAGGYGRPGDSPYRRSPSPVFRRRPSPDYGRAHSPAYDRYNGPYERRRSPDYGRNR
        ETQEDATKALECTHMSKILDRVVSVEYALRDDGERGDPFDESPRRAGGYGRPGDSPYRRSPSPVFRRRPSPDYGRAHSPAYDRYNGPYERRRSPDYGRNR
Subjt:  ETQEDATKALECTHMSKILDRVVSVEYALRDDGERGDPFDESPRRAGGYGRPGDSPYRRSPSPVFRRRPSPDYGRAHSPAYDRYNGPYERRRSPDYGRNR

Query:  SPEYGGRFRSRSPIRRSRT
        SPEYGGRFRSRSPIRRSRT
Subjt:  SPEYGGRFRSRSPIRRSRT

XP_004133800.1 serine/arginine-rich splicing factor RS31 isoform X1 [Cucumis sativus]7.1e-12199.54Show/hide
Query:  AGFAFVYFEDERDAEDAIRGLDNLPFGYDRRRLSVEWARGERGRHRDGSKSMANQRPTKTLFVINFDPIRTRVRDIERHFEPYGKVLNVRIRRNFAFVQF
        +GFAFVYFEDERDAEDAIRGLDNLPFGYDRRRLSVEWARGERGRHRDGSKSMANQRPTKTLFVINFDPIRTRVRDIERHFEPYGKVLNVRIRRNFAFVQF
Subjt:  AGFAFVYFEDERDAEDAIRGLDNLPFGYDRRRLSVEWARGERGRHRDGSKSMANQRPTKTLFVINFDPIRTRVRDIERHFEPYGKVLNVRIRRNFAFVQF

Query:  ETQEDATKALECTHMSKILDRVVSVEYALRDDGERGDPFDESPRRAGGYGRPGDSPYRRSPSPVFRRRPSPDYGRAHSPAYDRYNGPYERRRSPDYGRNR
        ETQEDATKALECTHMSKILDRVVSVEYALRDDGERGDPFDESPRRAGGYGRPGDSPYRRSPSPVFRRRPSPDYGRAHSPAYDRYNGPYERRRSPDYGRNR
Subjt:  ETQEDATKALECTHMSKILDRVVSVEYALRDDGERGDPFDESPRRAGGYGRPGDSPYRRSPSPVFRRRPSPDYGRAHSPAYDRYNGPYERRRSPDYGRNR

Query:  SPEYGGRFRSRSPIRRSRT
        SPEYGGRFRSRSPIRRSRT
Subjt:  SPEYGGRFRSRSPIRRSRT

XP_011650664.1 serine/arginine-rich splicing factor RS31 isoform X2 [Cucumis sativus]3.3e-126100Show/hide
Query:  MSNCYYLAGFAFVYFEDERDAEDAIRGLDNLPFGYDRRRLSVEWARGERGRHRDGSKSMANQRPTKTLFVINFDPIRTRVRDIERHFEPYGKVLNVRIRR
        MSNCYYLAGFAFVYFEDERDAEDAIRGLDNLPFGYDRRRLSVEWARGERGRHRDGSKSMANQRPTKTLFVINFDPIRTRVRDIERHFEPYGKVLNVRIRR
Subjt:  MSNCYYLAGFAFVYFEDERDAEDAIRGLDNLPFGYDRRRLSVEWARGERGRHRDGSKSMANQRPTKTLFVINFDPIRTRVRDIERHFEPYGKVLNVRIRR

Query:  NFAFVQFETQEDATKALECTHMSKILDRVVSVEYALRDDGERGDPFDESPRRAGGYGRPGDSPYRRSPSPVFRRRPSPDYGRAHSPAYDRYNGPYERRRS
        NFAFVQFETQEDATKALECTHMSKILDRVVSVEYALRDDGERGDPFDESPRRAGGYGRPGDSPYRRSPSPVFRRRPSPDYGRAHSPAYDRYNGPYERRRS
Subjt:  NFAFVQFETQEDATKALECTHMSKILDRVVSVEYALRDDGERGDPFDESPRRAGGYGRPGDSPYRRSPSPVFRRRPSPDYGRAHSPAYDRYNGPYERRRS

Query:  PDYGRNRSPEYGGRFRSRSPIRRSRT
        PDYGRNRSPEYGGRFRSRSPIRRSRT
Subjt:  PDYGRNRSPEYGGRFRSRSPIRRSRT

XP_011650665.1 serine/arginine-rich splicing factor RS31 isoform X3 [Cucumis sativus]3.2e-121100Show/hide
Query:  AGFAFVYFEDERDAEDAIRGLDNLPFGYDRRRLSVEWARGERGRHRDGSKSMANQRPTKTLFVINFDPIRTRVRDIERHFEPYGKVLNVRIRRNFAFVQF
        AGFAFVYFEDERDAEDAIRGLDNLPFGYDRRRLSVEWARGERGRHRDGSKSMANQRPTKTLFVINFDPIRTRVRDIERHFEPYGKVLNVRIRRNFAFVQF
Subjt:  AGFAFVYFEDERDAEDAIRGLDNLPFGYDRRRLSVEWARGERGRHRDGSKSMANQRPTKTLFVINFDPIRTRVRDIERHFEPYGKVLNVRIRRNFAFVQF

Query:  ETQEDATKALECTHMSKILDRVVSVEYALRDDGERGDPFDESPRRAGGYGRPGDSPYRRSPSPVFRRRPSPDYGRAHSPAYDRYNGPYERRRSPDYGRNR
        ETQEDATKALECTHMSKILDRVVSVEYALRDDGERGDPFDESPRRAGGYGRPGDSPYRRSPSPVFRRRPSPDYGRAHSPAYDRYNGPYERRRSPDYGRNR
Subjt:  ETQEDATKALECTHMSKILDRVVSVEYALRDDGERGDPFDESPRRAGGYGRPGDSPYRRSPSPVFRRRPSPDYGRAHSPAYDRYNGPYERRRSPDYGRNR

Query:  SPEYGGRFRSRSPIRRSRT
        SPEYGGRFRSRSPIRRSRT
Subjt:  SPEYGGRFRSRSPIRRSRT

XP_038893498.1 serine/arginine-rich splicing factor RS31 isoform X2 [Benincasa hispida]1.9e-12198.24Show/hide
Query:  MSNCYYLAGFAFVYFEDERDAEDAIRGLDNLPFGYDRRRLSVEWARGERGRHRDGSKSMANQRPTKTLFVINFDPIRTRVRDIERHFEPYGKVLNVRIRR
        +SNCYYLAGFAFVYFEDERDAEDAIRGLDNLPFGYDRRRLSVEWARGERGRHRDGSKSMANQRPTKTLFVINFDPIRTRVRDIERHFEPYGKVLNVRIRR
Subjt:  MSNCYYLAGFAFVYFEDERDAEDAIRGLDNLPFGYDRRRLSVEWARGERGRHRDGSKSMANQRPTKTLFVINFDPIRTRVRDIERHFEPYGKVLNVRIRR

Query:  NFAFVQFETQEDATKALECTHMSKILDRVVSVEYALRDDGERGDPFDESPRRAGGYGRPGDSPYRRSPSPVFRRRPSPDYGRAHSPAYDRYNGPYERRRS
        NFAFVQFETQEDATKALECTHMSKILDRVVSVEYALRDDGERGDPFDESPRRA GYGRPGDSPYRRSPSPVFRRRPSPDYGRA SPAYDRYNGPYERRRS
Subjt:  NFAFVQFETQEDATKALECTHMSKILDRVVSVEYALRDDGERGDPFDESPRRAGGYGRPGDSPYRRSPSPVFRRRPSPDYGRAHSPAYDRYNGPYERRRS

Query:  PDYGRNRSPEY-GGRFRSRSPIRRSRT
        PDYGRNRSPEY GGRFRSRSPIRRSRT
Subjt:  PDYGRNRSPEY-GGRFRSRSPIRRSRT

TrEMBL top hitse value%identityAlignment
A0A0A0L8H4 Uncharacterized protein3.4e-12199.54Show/hide
Query:  AGFAFVYFEDERDAEDAIRGLDNLPFGYDRRRLSVEWARGERGRHRDGSKSMANQRPTKTLFVINFDPIRTRVRDIERHFEPYGKVLNVRIRRNFAFVQF
        +GFAFVYFEDERDAEDAIRGLDNLPFGYDRRRLSVEWARGERGRHRDGSKSMANQRPTKTLFVINFDPIRTRVRDIERHFEPYGKVLNVRIRRNFAFVQF
Subjt:  AGFAFVYFEDERDAEDAIRGLDNLPFGYDRRRLSVEWARGERGRHRDGSKSMANQRPTKTLFVINFDPIRTRVRDIERHFEPYGKVLNVRIRRNFAFVQF

Query:  ETQEDATKALECTHMSKILDRVVSVEYALRDDGERGDPFDESPRRAGGYGRPGDSPYRRSPSPVFRRRPSPDYGRAHSPAYDRYNGPYERRRSPDYGRNR
        ETQEDATKALECTHMSKILDRVVSVEYALRDDGERGDPFDESPRRAGGYGRPGDSPYRRSPSPVFRRRPSPDYGRAHSPAYDRYNGPYERRRSPDYGRNR
Subjt:  ETQEDATKALECTHMSKILDRVVSVEYALRDDGERGDPFDESPRRAGGYGRPGDSPYRRSPSPVFRRRPSPDYGRAHSPAYDRYNGPYERRRSPDYGRNR

Query:  SPEYGGRFRSRSPIRRSRT
        SPEYGGRFRSRSPIRRSRT
Subjt:  SPEYGGRFRSRSPIRRSRT

A0A1S3AUZ7 serine/arginine-rich splicing factor RS31-like isoform X13.4e-12199.54Show/hide
Query:  AGFAFVYFEDERDAEDAIRGLDNLPFGYDRRRLSVEWARGERGRHRDGSKSMANQRPTKTLFVINFDPIRTRVRDIERHFEPYGKVLNVRIRRNFAFVQF
        +GFAFVYFEDERDAEDAIRGLDNLPFGYDRRRLSVEWARGERGRHRDGSKSMANQRPTKTLFVINFDPIRTRVRDIERHFEPYGKVLNVRIRRNFAFVQF
Subjt:  AGFAFVYFEDERDAEDAIRGLDNLPFGYDRRRLSVEWARGERGRHRDGSKSMANQRPTKTLFVINFDPIRTRVRDIERHFEPYGKVLNVRIRRNFAFVQF

Query:  ETQEDATKALECTHMSKILDRVVSVEYALRDDGERGDPFDESPRRAGGYGRPGDSPYRRSPSPVFRRRPSPDYGRAHSPAYDRYNGPYERRRSPDYGRNR
        ETQEDATKALECTHMSKILDRVVSVEYALRDDGERGDPFDESPRRAGGYGRPGDSPYRRSPSPVFRRRPSPDYGRAHSPAYDRYNGPYERRRSPDYGRNR
Subjt:  ETQEDATKALECTHMSKILDRVVSVEYALRDDGERGDPFDESPRRAGGYGRPGDSPYRRSPSPVFRRRPSPDYGRAHSPAYDRYNGPYERRRSPDYGRNR

Query:  SPEYGGRFRSRSPIRRSRT
        SPEYGGRFRSRSPIRRSRT
Subjt:  SPEYGGRFRSRSPIRRSRT

A0A1S4DTR0 serine/arginine-rich splicing factor RS31-like isoform X21.5e-121100Show/hide
Query:  AGFAFVYFEDERDAEDAIRGLDNLPFGYDRRRLSVEWARGERGRHRDGSKSMANQRPTKTLFVINFDPIRTRVRDIERHFEPYGKVLNVRIRRNFAFVQF
        AGFAFVYFEDERDAEDAIRGLDNLPFGYDRRRLSVEWARGERGRHRDGSKSMANQRPTKTLFVINFDPIRTRVRDIERHFEPYGKVLNVRIRRNFAFVQF
Subjt:  AGFAFVYFEDERDAEDAIRGLDNLPFGYDRRRLSVEWARGERGRHRDGSKSMANQRPTKTLFVINFDPIRTRVRDIERHFEPYGKVLNVRIRRNFAFVQF

Query:  ETQEDATKALECTHMSKILDRVVSVEYALRDDGERGDPFDESPRRAGGYGRPGDSPYRRSPSPVFRRRPSPDYGRAHSPAYDRYNGPYERRRSPDYGRNR
        ETQEDATKALECTHMSKILDRVVSVEYALRDDGERGDPFDESPRRAGGYGRPGDSPYRRSPSPVFRRRPSPDYGRAHSPAYDRYNGPYERRRSPDYGRNR
Subjt:  ETQEDATKALECTHMSKILDRVVSVEYALRDDGERGDPFDESPRRAGGYGRPGDSPYRRSPSPVFRRRPSPDYGRAHSPAYDRYNGPYERRRSPDYGRNR

Query:  SPEYGGRFRSRSPIRRSRT
        SPEYGGRFRSRSPIRRSRT
Subjt:  SPEYGGRFRSRSPIRRSRT

A0A5D3DBI0 Serine/arginine-rich splicing factor RS31 isoform X23.4e-12199.54Show/hide
Query:  AGFAFVYFEDERDAEDAIRGLDNLPFGYDRRRLSVEWARGERGRHRDGSKSMANQRPTKTLFVINFDPIRTRVRDIERHFEPYGKVLNVRIRRNFAFVQF
        +GFAFVYFEDERDAEDAIRGLDNLPFGYDRRRLSVEWARGERGRHRDGSKSMANQRPTKTLFVINFDPIRTRVRDIERHFEPYGKVLNVRIRRNFAFVQF
Subjt:  AGFAFVYFEDERDAEDAIRGLDNLPFGYDRRRLSVEWARGERGRHRDGSKSMANQRPTKTLFVINFDPIRTRVRDIERHFEPYGKVLNVRIRRNFAFVQF

Query:  ETQEDATKALECTHMSKILDRVVSVEYALRDDGERGDPFDESPRRAGGYGRPGDSPYRRSPSPVFRRRPSPDYGRAHSPAYDRYNGPYERRRSPDYGRNR
        ETQEDATKALECTHMSKILDRVVSVEYALRDDGERGDPFDESPRRAGGYGRPGDSPYRRSPSPVFRRRPSPDYGRAHSPAYDRYNGPYERRRSPDYGRNR
Subjt:  ETQEDATKALECTHMSKILDRVVSVEYALRDDGERGDPFDESPRRAGGYGRPGDSPYRRSPSPVFRRRPSPDYGRAHSPAYDRYNGPYERRRSPDYGRNR

Query:  SPEYGGRFRSRSPIRRSRT
        SPEYGGRFRSRSPIRRSRT
Subjt:  SPEYGGRFRSRSPIRRSRT

A0A6J1D289 serine/arginine-rich splicing factor RS31-like isoform X22.2e-11295.91Show/hide
Query:  AGFAFVYFEDERDAEDAIRGLDNLPFGYDRRRLSVEWARGERGRHRDGSKSMANQRPTKTLFVINFDPIRTRVRDIERHFEPYGKVLNVRIRRNFAFVQF
        AGFAFVYFEDERDAEDAIRGLDN+ FGYDRRRLSVEWARGERGRHRDGSKS+ANQRPTKTLFVINFDPIRTRVRDIERHFEPYGKVLNVRIRRNFAFVQF
Subjt:  AGFAFVYFEDERDAEDAIRGLDNLPFGYDRRRLSVEWARGERGRHRDGSKSMANQRPTKTLFVINFDPIRTRVRDIERHFEPYGKVLNVRIRRNFAFVQF

Query:  ETQEDATKALECTHMSKILDRVVSVEYALRDDGERGDPFDESPRRAGGYGRPGD-SPYRRSPSPVFRRRPSPDYGRAHSPAYDRYNGPYERRRSPDYGRN
        ETQEDATKALECTHMSKILDRVVSVEYALRDDGERGDPFDESPRRA  YGRPGD SPYRRSPSP FRRRPSPDYGRA SPAYDRYNGPYERRRSPDYGRN
Subjt:  ETQEDATKALECTHMSKILDRVVSVEYALRDDGERGDPFDESPRRAGGYGRPGD-SPYRRSPSPVFRRRPSPDYGRAHSPAYDRYNGPYERRRSPDYGRN

Query:  RSPEYGGRFRSRSPIRRSRT
        RSPEY GRFRSRSPIRRSRT
Subjt:  RSPEYGGRFRSRSPIRRSRT

SwissProt top hitse value%identityAlignment
P92964 Serine/arginine-rich splicing factor RS311.7e-7770Show/hide
Query:  AGFAFVYFEDERDAEDAIRGLDNLPFGYDRRRLSVEWARGERGRHRDGSKSMANQRPTKTLFVINFDPIRTRVRDIERHFEPYGKVLNVRIRRNFAFVQF
        +G+AFVYFEDERDAEDAIR LDN PFGY++RRLSVEWA+GERGR R  +K+ +N +PTKTLFVINFDPIRT+  DIE+HFEPYGKV NVRIRRNF+FVQF
Subjt:  AGFAFVYFEDERDAEDAIRGLDNLPFGYDRRRLSVEWARGERGRHRDGSKSMANQRPTKTLFVINFDPIRTRVRDIERHFEPYGKVLNVRIRRNFAFVQF

Query:  ETQEDATKALECTHMSKILDRVVSVEYALRDDGERGD-PFDESPRRAGG--YGRPGDSPYRRSPSPVFRRRPSPDYGRAHSPAYDRYNGP--YERRRSPD
        ETQEDATKALE T  SKILDRVVSVEYAL+DD ER D     SPRR+    Y R     Y R PSP   RRPSPDYGRA SP YDRY GP  YERRRSPD
Subjt:  ETQEDATKALECTHMSKILDRVVSVEYALRDDGERGD-PFDESPRRAGG--YGRPGDSPYRRSPSPVFRRRPSPDYGRAHSPAYDRYNGP--YERRRSPD

Query:  YGRNRSPEYG-------GRFRSRSPIRRSR
        YGR RS +YG        R+RSRSP+ R R
Subjt:  YGRNRSPEYG-------GRFRSRSPIRRSR

P92965 Serine/arginine-rich splicing factor RS403.5e-5457.76Show/hide
Query:  AGFAFVYFEDERDAEDAIRGLDNLPFGYDRRRLSVEWARGERG---RHRDGS-KSMANQRPTKTLFVINFDPIRTRVRDIERHFEPYGKVLNVRIRRNFA
        AGFAFVY EDERDAEDAIR LD   FG   RRL VEW + ERG   R   GS +S ++ RP+KTLFVINFD   TR RD+E+HFEPYGK++NVRIRRNFA
Subjt:  AGFAFVYFEDERDAEDAIRGLDNLPFGYDRRRLSVEWARGERG---RHRDGS-KSMANQRPTKTLFVINFDPIRTRVRDIERHFEPYGKVLNVRIRRNFA

Query:  FVQFETQEDATKALECTHMSKILDRVVSVEYALRDDGERGDPFDESPRRAGGYGRPGDSP--YRRSPSPVFRRRPSPDYGRAHSP--AY--DRYNGPYER
        F+Q+E QEDAT+AL+ ++ SK++D+V+SVEYA++DD  RG+    SP R     R   SP   RRSPSP  R R SPDYGR  SP  AY  +R +  Y R
Subjt:  FVQFETQEDATKALECTHMSKILDRVVSVEYALRDDGERGDPFDESPRRAGGYGRPGDSP--YRRSPSPVFRRRPSPDYGRAHSP--AY--DRYNGPYER

Query:  RRSPD-YGRNR--SPEYG-GRFRSRSPIRRSR
        RRSP  Y ++R  SPEYG  R  + SP RR R
Subjt:  RRSPD-YGRNR--SPEYG-GRFRSRSPIRRSR

P92966 Serine/arginine-rich splicing factor RS417.0e-5554.75Show/hide
Query:  AGFAFVYFEDERDAEDAIRGLDNLPFGYDRRRLSVEWARGER---GRHRDGSKSMANQRPTKTLFVINFDPIRTRVRDIERHFEPYGKVLNVRIRRNFAF
        AGFAFVY EDERDAEDAIR LD   +G   RRL VEW + +R   GR     +S +  RP+KTLFVINFD   TR RD+ERHFEPYGK++NVRIRRNFAF
Subjt:  AGFAFVYFEDERDAEDAIRGLDNLPFGYDRRRLSVEWARGER---GRHRDGSKSMANQRPTKTLFVINFDPIRTRVRDIERHFEPYGKVLNVRIRRNFAF

Query:  VQFETQEDATKALECTHMSKILDRVVSVEYALRDDGERGDPFDESPRRAGGYGRPGDSPYRRSPSPVFRRRPSPDYGRAHSPAYDRYNGPYERRRSPDYG
        +Q+E QEDAT+AL+ T+ SK++D+V+SVEYA++DD  RG+ +    RR     R      RRSPSP  R R SPDYGR  SP   +       R SPDYG
Subjt:  VQFETQEDATKALECTHMSKILDRVVSVEYALRDDGERGDPFDESPRRAGGYGRPGDSPYRRSPSPVFRRRPSPDYGRAHSPAYDRYNGPYERRRSPDYG

Query:  RNRSPEYGGRFRSRSPIRRSR
        R R        RS SP +R+R
Subjt:  RNRSPEYGGRFRSRSPIRRSR

Q5PPI1 Serine/arginine-rich splicing factor 91.0e-0830.99Show/hide
Query:  MSNCYYLAGFAFVYFEDERDAEDAIRGLDNLPFGYDRRRLSVEWARGERGRHRDGSKSMANQRPTKTLFVINFDPIRTRVRDIERHFEPYGKVLNVRIRR
        + N + L  FAFV FED RDAEDAI G +   +G  R R+    A G RG     S++    R +    +++  P     +D++ H    G V    +++
Subjt:  MSNCYYLAGFAFVYFEDERDAEDAIRGLDNLPFGYDRRRLSVEWARGERGRHRDGSKSMANQRPTKTLFVINFDPIRTRVRDIERHFEPYGKVLNVRIRR

Query:  N-FAFVQFETQEDATKALECTHMSKILDRVVSVEYALRDDGERGDPFDESPRRAGGYGRPGDSPYRRSPSP
        +    V++  +ED   AL     +K         Y +R   ERG  +  S  R+G  GR  DSPY+   SP
Subjt:  N-FAFVQFETQEDATKALECTHMSKILDRVVSVEYALRDDGERGDPFDESPRRAGGYGRPGDSPYRRSPSP

Q9ZPX8 Serine/arginine-rich splicing factor RS31A1.2e-7569.13Show/hide
Query:  AGFAFVYFEDERDAEDAIRGLDNLPFGYDRRRLSVEWAR---GERGRHRDGSKSMANQRPTKTLFVINFDPIRTRVRDIERHFEPYGKVLNVRIRRNFAF
        +G+AFVYFEDERDAEDAIR  DN  FGY RR+LSVEWA+   GERG+ RDG K+++NQRPTKTLFVINFDPIRTR RD+ERHFEPYGKVLNVR+RRNFAF
Subjt:  AGFAFVYFEDERDAEDAIRGLDNLPFGYDRRRLSVEWAR---GERGRHRDGSKSMANQRPTKTLFVINFDPIRTRVRDIERHFEPYGKVLNVRIRRNFAF

Query:  VQFETQEDATKALECTHMSKILDRVVSVEYALRDDGERGDPFDESPRRAGGYGRPGDSPYRRSPSPVFRRRPSPDYGRAHSPAYDRYNG--PYERRRSPD
        VQF TQEDATKAL+ TH SK+LD+VVSVEYALR+ GER D +  S R             RRSPSPV+RRRPSPDY R  SP YDRY G  PYERR+SPD
Subjt:  VQFETQEDATKALECTHMSKILDRVVSVEYALRDDGERGDPFDESPRRAGGYGRPGDSPYRRSPSPVFRRRPSPDYGRAHSPAYDRYNG--PYERRRSPD

Query:  YGRNRSPEYG-------GRFRSRSPIRRSR
        YGR RS +YG       G  RSRSPI+R+R
Subjt:  YGRNRSPEYG-------GRFRSRSPIRRSR

Arabidopsis top hitse value%identityAlignment
AT2G46610.1 RNA-binding (RRM/RBD/RNP motifs) family protein8.8e-7769.13Show/hide
Query:  AGFAFVYFEDERDAEDAIRGLDNLPFGYDRRRLSVEWAR---GERGRHRDGSKSMANQRPTKTLFVINFDPIRTRVRDIERHFEPYGKVLNVRIRRNFAF
        +G+AFVYFEDERDAEDAIR  DN  FGY RR+LSVEWA+   GERG+ RDG K+++NQRPTKTLFVINFDPIRTR RD+ERHFEPYGKVLNVR+RRNFAF
Subjt:  AGFAFVYFEDERDAEDAIRGLDNLPFGYDRRRLSVEWAR---GERGRHRDGSKSMANQRPTKTLFVINFDPIRTRVRDIERHFEPYGKVLNVRIRRNFAF

Query:  VQFETQEDATKALECTHMSKILDRVVSVEYALRDDGERGDPFDESPRRAGGYGRPGDSPYRRSPSPVFRRRPSPDYGRAHSPAYDRYNG--PYERRRSPD
        VQF TQEDATKAL+ TH SK+LD+VVSVEYALR+ GER D +  S R             RRSPSPV+RRRPSPDY R  SP YDRY G  PYERR+SPD
Subjt:  VQFETQEDATKALECTHMSKILDRVVSVEYALRDDGERGDPFDESPRRAGGYGRPGDSPYRRSPSPVFRRRPSPDYGRAHSPAYDRYNG--PYERRRSPD

Query:  YGRNRSPEYG-------GRFRSRSPIRRSR
        YGR RS +YG       G  RSRSPI+R+R
Subjt:  YGRNRSPEYG-------GRFRSRSPIRRSR

AT2G46610.2 RNA-binding (RRM/RBD/RNP motifs) family protein3.9e-7769.57Show/hide
Query:  AGFAFVYFEDERDAEDAIRGLDNLPFGYDRRRLSVEWAR---GERGRHRDGSKSMANQRPTKTLFVINFDPIRTRVRDIERHFEPYGKVLNVRIRRNFAF
        AG+AFVYFEDERDAEDAIR  DN  FGY RR+LSVEWA+   GERG+ RDG K+++NQRPTKTLFVINFDPIRTR RD+ERHFEPYGKVLNVR+RRNFAF
Subjt:  AGFAFVYFEDERDAEDAIRGLDNLPFGYDRRRLSVEWAR---GERGRHRDGSKSMANQRPTKTLFVINFDPIRTRVRDIERHFEPYGKVLNVRIRRNFAF

Query:  VQFETQEDATKALECTHMSKILDRVVSVEYALRDDGERGDPFDESPRRAGGYGRPGDSPYRRSPSPVFRRRPSPDYGRAHSPAYDRYNG--PYERRRSPD
        VQF TQEDATKAL+ TH SK+LD+VVSVEYALR+ GER D +  S R             RRSPSPV+RRRPSPDY R  SP YDRY G  PYERR+SPD
Subjt:  VQFETQEDATKALECTHMSKILDRVVSVEYALRDDGERGDPFDESPRRAGGYGRPGDSPYRRSPSPVFRRRPSPDYGRAHSPAYDRYNG--PYERRRSPD

Query:  YGRNRSPEYG-------GRFRSRSPIRRSR
        YGR RS +YG       G  RSRSPI+R+R
Subjt:  YGRNRSPEYG-------GRFRSRSPIRRSR

AT3G61860.1 RNA-binding (RRM/RBD/RNP motifs) family protein1.2e-7870Show/hide
Query:  AGFAFVYFEDERDAEDAIRGLDNLPFGYDRRRLSVEWARGERGRHRDGSKSMANQRPTKTLFVINFDPIRTRVRDIERHFEPYGKVLNVRIRRNFAFVQF
        +G+AFVYFEDERDAEDAIR LDN PFGY++RRLSVEWA+GERGR R  +K+ +N +PTKTLFVINFDPIRT+  DIE+HFEPYGKV NVRIRRNF+FVQF
Subjt:  AGFAFVYFEDERDAEDAIRGLDNLPFGYDRRRLSVEWARGERGRHRDGSKSMANQRPTKTLFVINFDPIRTRVRDIERHFEPYGKVLNVRIRRNFAFVQF

Query:  ETQEDATKALECTHMSKILDRVVSVEYALRDDGERGD-PFDESPRRAGG--YGRPGDSPYRRSPSPVFRRRPSPDYGRAHSPAYDRYNGP--YERRRSPD
        ETQEDATKALE T  SKILDRVVSVEYAL+DD ER D     SPRR+    Y R     Y R PSP   RRPSPDYGRA SP YDRY GP  YERRRSPD
Subjt:  ETQEDATKALECTHMSKILDRVVSVEYALRDDGERGD-PFDESPRRAGG--YGRPGDSPYRRSPSPVFRRRPSPDYGRAHSPAYDRYNGP--YERRRSPD

Query:  YGRNRSPEYG-------GRFRSRSPIRRSR
        YGR RS +YG        R+RSRSP+ R R
Subjt:  YGRNRSPEYG-------GRFRSRSPIRRSR

AT5G52040.1 RNA-binding (RRM/RBD/RNP motifs) family protein5.0e-5654.75Show/hide
Query:  AGFAFVYFEDERDAEDAIRGLDNLPFGYDRRRLSVEWARGER---GRHRDGSKSMANQRPTKTLFVINFDPIRTRVRDIERHFEPYGKVLNVRIRRNFAF
        AGFAFVY EDERDAEDAIR LD   +G   RRL VEW + +R   GR     +S +  RP+KTLFVINFD   TR RD+ERHFEPYGK++NVRIRRNFAF
Subjt:  AGFAFVYFEDERDAEDAIRGLDNLPFGYDRRRLSVEWARGER---GRHRDGSKSMANQRPTKTLFVINFDPIRTRVRDIERHFEPYGKVLNVRIRRNFAF

Query:  VQFETQEDATKALECTHMSKILDRVVSVEYALRDDGERGDPFDESPRRAGGYGRPGDSPYRRSPSPVFRRRPSPDYGRAHSPAYDRYNGPYERRRSPDYG
        +Q+E QEDAT+AL+ T+ SK++D+V+SVEYA++DD  RG+ +    RR     R      RRSPSP  R R SPDYGR  SP   +       R SPDYG
Subjt:  VQFETQEDATKALECTHMSKILDRVVSVEYALRDDGERGDPFDESPRRAGGYGRPGDSPYRRSPSPVFRRRPSPDYGRAHSPAYDRYNGPYERRRSPDYG

Query:  RNRSPEYGGRFRSRSPIRRSR
        R R        RS SP +R+R
Subjt:  RNRSPEYGGRFRSRSPIRRSR

AT5G52040.2 RNA-binding (RRM/RBD/RNP motifs) family protein5.0e-5654.75Show/hide
Query:  AGFAFVYFEDERDAEDAIRGLDNLPFGYDRRRLSVEWARGER---GRHRDGSKSMANQRPTKTLFVINFDPIRTRVRDIERHFEPYGKVLNVRIRRNFAF
        AGFAFVY EDERDAEDAIR LD   +G   RRL VEW + +R   GR     +S +  RP+KTLFVINFD   TR RD+ERHFEPYGK++NVRIRRNFAF
Subjt:  AGFAFVYFEDERDAEDAIRGLDNLPFGYDRRRLSVEWARGER---GRHRDGSKSMANQRPTKTLFVINFDPIRTRVRDIERHFEPYGKVLNVRIRRNFAF

Query:  VQFETQEDATKALECTHMSKILDRVVSVEYALRDDGERGDPFDESPRRAGGYGRPGDSPYRRSPSPVFRRRPSPDYGRAHSPAYDRYNGPYERRRSPDYG
        +Q+E QEDAT+AL+ T+ SK++D+V+SVEYA++DD  RG+ +    RR     R      RRSPSP  R R SPDYGR  SP   +       R SPDYG
Subjt:  VQFETQEDATKALECTHMSKILDRVVSVEYALRDDGERGDPFDESPRRAGGYGRPGDSPYRRSPSPVFRRRPSPDYGRAHSPAYDRYNGPYERRRSPDYG

Query:  RNRSPEYGGRFRSRSPIRRSR
        R R        RS SP +R+R
Subjt:  RNRSPEYGGRFRSRSPIRRSR


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCTAATTGTTATTATTTGGCAGGTTTTGCCTTTGTTTACTTTGAAGATGAGAGGGATGCTGAAGATGCCATTCGGGGACTTGATAACTTGCCATTTGGTTATGATAG
ACGCAGATTGTCTGTGGAATGGGCCAGGGGTGAACGAGGTCGTCATCGTGATGGGTCCAAGTCAATGGCTAATCAGAGGCCAACAAAAACCCTGTTTGTGATCAATTTCG
ACCCCATCCGTACAAGAGTACGTGATATTGAAAGACACTTCGAACCCTATGGGAAAGTGCTCAATGTTCGGATCAGAAGGAACTTTGCATTTGTACAATTTGAAACGCAG
GAGGATGCCACAAAAGCCCTTGAGTGTACCCACATGAGCAAGATATTAGACAGGGTTGTATCAGTTGAATATGCTTTGAGGGACGATGGCGAGAGGGGCGATCCTTTTGA
TGAAAGCCCTCGAAGAGCAGGTGGTTATGGGCGGCCAGGGGATAGTCCCTACAGGAGGTCTCCAAGTCCAGTGTTTCGCCGTCGACCAAGTCCTGACTATGGGCGAGCTC
ATAGCCCTGCTTACGATAGATATAATGGGCCCTATGAACGACGTAGGAGTCCTGATTATGGTAGGAATCGAAGCCCTGAATATGGTGGTAGATTTCGCAGCCGTTCACCC
ATTCGGAGGTCAAGAACCTGA
mRNA sequenceShow/hide mRNA sequence
GGGCATCTTCGTTAAAAAGACTCTGCCTTTCTCTTCCTCCTAGGGTTTCTCTGTTCTGTTCGAATCCGAGAATCTGCAAGTACGATCGTTTGTAGCAACGATGAGGCCGA
TATTTGTTGGGAACTTTGGGTATGACACCCGGCAATCTGAACTGGAGCGCTTATTCTCCAAATATGGGAGAGTTGAAAGGATCGACATGAAATCTGGAATTTCTTCTAAG
GAAAATGAGCCAAGCTCCTATCTGGGCTCACCACCATGACACCATCTGTGCATTAAAATTAATTTGGAAGGAAACTTCCTGCTTGCCTGCTTACCTTCACCTACAGATAG
CATCATCCTGATTTTTCTTCAATCAATCATTCGTCATTCATCTACCTCATCACTTAAGTTGCAATACACCAGAATCGTCTTAATGGATTGATCTTTATCTCATGCCTCAT
CAATTAAGTTGCAATTCATCAGAATCGTGTTAATGGATTGATCTTTATCTCATGCCTTGCCTATCTATCACCACTGATCATAGGACATCACTGAAATCTGATCATGCCTT
CCATATGATAATAGTGGCTGAATGAAATCTATCATGCCTTCCATATGATAATAGTGGCTGAATGAAATCTGTCATGCCATGCCTTCCATATCTGAACTCGTGCTGTGTGA
AGGTGAAGGATAGTTGAATTTTTGGATTAAAACCTTAAGTAGGCAACCATCTTAGTCCATCATGCAACGTCTCTACCGCTATATGTGCATCAGTCCTCCCATATTTGCAG
GTGTTGTATTTTTTATAGTTTATCCCAGGGAGAGAAATCACGGGGCTGAGTGACAATACCTGCTAAATAGATGATGCTTCAACAGCTTACCAGTTTTGTATGTCTAATTG
TTATTATTTGGCAGGTTTTGCCTTTGTTTACTTTGAAGATGAGAGGGATGCTGAAGATGCCATTCGGGGACTTGATAACTTGCCATTTGGTTATGATAGACGCAGATTGT
CTGTGGAATGGGCCAGGGGTGAACGAGGTCGTCATCGTGATGGGTCCAAGTCAATGGCTAATCAGAGGCCAACAAAAACCCTGTTTGTGATCAATTTCGACCCCATCCGT
ACAAGAGTACGTGATATTGAAAGACACTTCGAACCCTATGGGAAAGTGCTCAATGTTCGGATCAGAAGGAACTTTGCATTTGTACAATTTGAAACGCAGGAGGATGCCAC
AAAAGCCCTTGAGTGTACCCACATGAGCAAGATATTAGACAGGGTTGTATCAGTTGAATATGCTTTGAGGGACGATGGCGAGAGGGGCGATCCTTTTGATGAAAGCCCTC
GAAGAGCAGGTGGTTATGGGCGGCCAGGGGATAGTCCCTACAGGAGGTCTCCAAGTCCAGTGTTTCGCCGTCGACCAAGTCCTGACTATGGGCGAGCTCATAGCCCTGCT
TACGATAGATATAATGGGCCCTATGAACGACGTAGGAGTCCTGATTATGGTAGGAATCGAAGCCCTGAATATGGTGGTAGATTTCGCAGCCGTTCACCCATTCGGAGGTC
AAGAACCTGAAGGAAACTATTGTTGAATTTTCAGTAGTTACATTCTTAGGTTTAGGTCTGTGGAGTGTGTTAAGTTCCTGTACAACCCTCGTATTTTAACTCTTTGAAAA
AACTATTGTTGGTAGATTTGAGATGTTGAAGGAAACACTTTTTATCTGTTTTTAGTTTTTAACTAGTGCTATTGGGTTTTATCCAACAAGTTCAAGGCTATCGTGTCTTT
CCAATTTTTCACTTGTCAACAATCGAATCCAGCATCAATGGAAGTGAAGTGTTAATTCCTGTATCGAATTGATTTTGAATATGCTAGAAAGAAAACGTGTATCGATGGGC
GGTTTTTGAGAAATTATGATCGATCTTTTATGCTCAGTGTTCATAAATTGAAGGTGTTTGAACGAAAAGTTGGCAGTA
Protein sequenceShow/hide protein sequence
MSNCYYLAGFAFVYFEDERDAEDAIRGLDNLPFGYDRRRLSVEWARGERGRHRDGSKSMANQRPTKTLFVINFDPIRTRVRDIERHFEPYGKVLNVRIRRNFAFVQFETQ
EDATKALECTHMSKILDRVVSVEYALRDDGERGDPFDESPRRAGGYGRPGDSPYRRSPSPVFRRRPSPDYGRAHSPAYDRYNGPYERRRSPDYGRNRSPEYGGRFRSRSP
IRRSRT