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MELO3C006178 (gene) of Melon (DHL92) v4 genome

Gene IDMELO3C006178
OrganismCucumis melo DHL92 (Melon (DHL92) v4)
DescriptionProtein LITTLE ZIPPER 3-like
Genome locationchr06:1492007..1493032
RNA-Seq ExpressionMELO3C006178
SyntenyMELO3C006178
Gene Ontology termsNA
InterPro domainsIPR039312 - Protein LITTLE ZIPPER


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0049024.1 protein LITTLE ZIPPER 3-like [Cucumis melo var. makuwa]1.4e-3598.8Show/hide
Query:  MRFATEEANSAGVKVEMEIKNLKLYMENQSIIEENERLRKKAFLLHKENQVLLSQLQNFSDYKPPQSSSDLSACSWESKQNHL
        MRF TEEANSAGVKVEMEIKNLKLYMENQSIIEENERLRKKAFLLHKENQVLLSQLQNFSDYKPPQSSSDLSACSWESKQNHL
Subjt:  MRFATEEANSAGVKVEMEIKNLKLYMENQSIIEENERLRKKAFLLHKENQVLLSQLQNFSDYKPPQSSSDLSACSWESKQNHL

KGN56585.1 hypothetical protein Csa_011002 [Cucumis sativus]5.8e-5094.83Show/hide
Query:  MCHSSRFILTPSYLACRHHRRRRPVRVYSLLRRMRFATEEANSAGVKVEMEIKNLKLYMENQSIIEENERLRKKAFLLHKENQVLLSQLQNFSDYKPPQS
        MCHSS FILTPSYLACR  RRRRPVRVYSLLRRMRFA EEANSAGVKVEMEIKNLKLYMENQSIIEENERLRKKAFLLHKENQVLLSQLQNFS YKPP S
Subjt:  MCHSSRFILTPSYLACRHHRRRRPVRVYSLLRRMRFATEEANSAGVKVEMEIKNLKLYMENQSIIEENERLRKKAFLLHKENQVLLSQLQNFSDYKPPQS

Query:  SSDLSACSWESKQNHL
        SSDLSACSWESKQNHL
Subjt:  SSDLSACSWESKQNHL

XP_022924351.1 protein LITTLE ZIPPER 1-like [Cucurbita moschata]6.4e-3382.08Show/hide
Query:  MCHSSRFILTPSYLACRHHRRRRPVRVYSLLRRMRFATEEANSAGVKVEMEIKNLKLYMENQSIIEENERLRKKAFLLHKENQVLLSQLQNFSDYKPPQS
        MC SSR  LT S+L  RH  RRRP+RVY LLRRMRF  EEAN+AGVKVEMEIKNLKLYMENQSIIEENERLRKKAFLLHKENQVLLSQLQNFS  K PQ 
Subjt:  MCHSSRFILTPSYLACRHHRRRRPVRVYSLLRRMRFATEEANSAGVKVEMEIKNLKLYMENQSIIEENERLRKKAFLLHKENQVLLSQLQNFSDYKPPQS

Query:  SSDLSA
        SS+LSA
Subjt:  SSDLSA

XP_022980450.1 protein LITTLE ZIPPER 1-like [Cucurbita maxima]1.9e-3281.13Show/hide
Query:  MCHSSRFILTPSYLACRHHRRRRPVRVYSLLRRMRFATEEANSAGVKVEMEIKNLKLYMENQSIIEENERLRKKAFLLHKENQVLLSQLQNFSDYKPPQS
        MC SSR  LT S+L  RH  RRRP+RVY LLRRMRF  EEAN+AGVKVEMEIKNLKLYMENQSIIEENERLRKKAFLLHKENQVLLSQLQNFS  K PQ 
Subjt:  MCHSSRFILTPSYLACRHHRRRRPVRVYSLLRRMRFATEEANSAGVKVEMEIKNLKLYMENQSIIEENERLRKKAFLLHKENQVLLSQLQNFSDYKPPQS

Query:  SSDLSA
         S+LSA
Subjt:  SSDLSA

XP_038901104.1 protein LITTLE ZIPPER 1-like [Benincasa hispida]3.3e-3780.17Show/hide
Query:  MCHSSRFILTPSYLACRHHRRRRPVRVYSLLRRMRFATEEANSAGVKVEMEIKNLKLYMENQSIIEENERLRKKAFLLHKENQVLLSQLQNFSDYKPPQS
        MC SSR ILTPSYLACRH  RRRPVRVY LLRRM+FA EE     V+ EMEIKNLKLYMENQSIIEENERLRKKAFLLHKENQVLLS+LQNFS++KP Q 
Subjt:  MCHSSRFILTPSYLACRHHRRRRPVRVYSLLRRMRFATEEANSAGVKVEMEIKNLKLYMENQSIIEENERLRKKAFLLHKENQVLLSQLQNFSDYKPPQS

Query:  SSDLSACSWESKQNHL
        SSDLS C  E KQNHL
Subjt:  SSDLSACSWESKQNHL

TrEMBL top hitse value%identityAlignment
A0A0A0L3S0 Uncharacterized protein2.8e-5094.83Show/hide
Query:  MCHSSRFILTPSYLACRHHRRRRPVRVYSLLRRMRFATEEANSAGVKVEMEIKNLKLYMENQSIIEENERLRKKAFLLHKENQVLLSQLQNFSDYKPPQS
        MCHSS FILTPSYLACR  RRRRPVRVYSLLRRMRFA EEANSAGVKVEMEIKNLKLYMENQSIIEENERLRKKAFLLHKENQVLLSQLQNFS YKPP S
Subjt:  MCHSSRFILTPSYLACRHHRRRRPVRVYSLLRRMRFATEEANSAGVKVEMEIKNLKLYMENQSIIEENERLRKKAFLLHKENQVLLSQLQNFSDYKPPQS

Query:  SSDLSACSWESKQNHL
        SSDLSACSWESKQNHL
Subjt:  SSDLSACSWESKQNHL

A0A5D3D1P7 Protein LITTLE ZIPPER 3-like6.7e-3698.8Show/hide
Query:  MRFATEEANSAGVKVEMEIKNLKLYMENQSIIEENERLRKKAFLLHKENQVLLSQLQNFSDYKPPQSSSDLSACSWESKQNHL
        MRF TEEANSAGVKVEMEIKNLKLYMENQSIIEENERLRKKAFLLHKENQVLLSQLQNFSDYKPPQSSSDLSACSWESKQNHL
Subjt:  MRFATEEANSAGVKVEMEIKNLKLYMENQSIIEENERLRKKAFLLHKENQVLLSQLQNFSDYKPPQSSSDLSACSWESKQNHL

A0A6J1CZF0 protein LITTLE ZIPPER 2-like4.3e-2770Show/hide
Query:  MCHSSRFIL---TPSYLACRHHRRRRPVRVYSLLRRMRFATEEANSAGVKVEMEIKNLKLYMENQSIIEENERLRKKAFLLHKENQVLLSQLQNFSDYKP
        MC SSR +    T S L CRH  RR P+RV+ L+RRMR   EEA   GV+VEMEIKNLKL+MENQSIIEENERLRK+AFLLHKENQVLLSQ+Q+FS+ KP
Subjt:  MCHSSRFIL---TPSYLACRHHRRRRPVRVYSLLRRMRFATEEANSAGVKVEMEIKNLKLYMENQSIIEENERLRKKAFLLHKENQVLLSQLQNFSDYKP

A0A6J1E9A8 protein LITTLE ZIPPER 1-like3.1e-3382.08Show/hide
Query:  MCHSSRFILTPSYLACRHHRRRRPVRVYSLLRRMRFATEEANSAGVKVEMEIKNLKLYMENQSIIEENERLRKKAFLLHKENQVLLSQLQNFSDYKPPQS
        MC SSR  LT S+L  RH  RRRP+RVY LLRRMRF  EEAN+AGVKVEMEIKNLKLYMENQSIIEENERLRKKAFLLHKENQVLLSQLQNFS  K PQ 
Subjt:  MCHSSRFILTPSYLACRHHRRRRPVRVYSLLRRMRFATEEANSAGVKVEMEIKNLKLYMENQSIIEENERLRKKAFLLHKENQVLLSQLQNFSDYKPPQS

Query:  SSDLSA
        SS+LSA
Subjt:  SSDLSA

A0A6J1IWC5 protein LITTLE ZIPPER 1-like9.0e-3381.13Show/hide
Query:  MCHSSRFILTPSYLACRHHRRRRPVRVYSLLRRMRFATEEANSAGVKVEMEIKNLKLYMENQSIIEENERLRKKAFLLHKENQVLLSQLQNFSDYKPPQS
        MC SSR  LT S+L  RH  RRRP+RVY LLRRMRF  EEAN+AGVKVEMEIKNLKLYMENQSIIEENERLRKKAFLLHKENQVLLSQLQNFS  K PQ 
Subjt:  MCHSSRFILTPSYLACRHHRRRRPVRVYSLLRRMRFATEEANSAGVKVEMEIKNLKLYMENQSIIEENERLRKKAFLLHKENQVLLSQLQNFSDYKPPQS

Query:  SSDLSA
         S+LSA
Subjt:  SSDLSA

SwissProt top hitse value%identityAlignment
F4IG60 Protein LITTLE ZIPPER 12.5e-0847.83Show/hide
Query:  MCHSS--RFILTPSYLACRHHRRRRPVRVYSLLRRMRFATEEANSAGVKVEMEIKNLKLYMENQSIIEENERLRKKAFLLHKENQVLLSQLQ
        MC SS   F  TP+ L   + + +  VR+  L RR R   EE        +ME+ NLKLY+ENQ+II ENE+L+KKA LLH+EN+ L S LQ
Subjt:  MCHSS--RFILTPSYLACRHHRRRRPVRVYSLLRRMRFATEEANSAGVKVEMEIKNLKLYMENQSIIEENERLRKKAFLLHKENQVLLSQLQ

Q56WL5 Protein LITTLE ZIPPER 45.0e-0460.98Show/hide
Query:  MEIKNLKLYMENQSIIEENERLRKKAFLLHKENQVLLSQLQ
        ME  N KLY++N  II+ENERLRKKA +L++ENQ LL +L+
Subjt:  MEIKNLKLYMENQSIIEENERLRKKAFLLHKENQVLLSQLQ

Q9LXI8 Protein LITTLE ZIPPER 38.5e-0454.55Show/hide
Query:  MEIKNLKLYMENQSIIEENERLRKKAFLLHKENQVLLSQL-QNFSDYKPPQSSSD
        ME  N KL++EN  I++ENERLRKKA LL++ENQ LL QL Q  S  K   + S+
Subjt:  MEIKNLKLYMENQSIIEENERLRKKAFLLHKENQVLLSQL-QNFSDYKPPQSSSD

Q9LZX5 Protein LITTLE ZIPPER 21.3e-0740.21Show/hide
Query:  TPSYLACRHHRRRRP-----VRVYSLLRRMRFATEEANSAGVKVEMEIKNLKLYMENQSIIEENERLRKKAFLLHKENQVLLSQLQNFSDYKPPQSS
        TP+  +  +H + +      +R+ +L RR R   E+        EME++NLKL++ENQSII ENE L+KKA LLH EN  L + L     Y P  +S
Subjt:  TPSYLACRHHRRRRP-----VRVYSLLRRMRFATEEANSAGVKVEMEIKNLKLYMENQSIIEENERLRKKAFLLHKENQVLLSQLQNFSDYKPPQSS

Arabidopsis top hitse value%identityAlignment
AT2G45450.1 protein binding1.8e-0947.83Show/hide
Query:  MCHSS--RFILTPSYLACRHHRRRRPVRVYSLLRRMRFATEEANSAGVKVEMEIKNLKLYMENQSIIEENERLRKKAFLLHKENQVLLSQLQ
        MC SS   F  TP+ L   + + +  VR+  L RR R   EE        +ME+ NLKLY+ENQ+II ENE+L+KKA LLH+EN+ L S LQ
Subjt:  MCHSS--RFILTPSYLACRHHRRRRPVRVYSLLRRMRFATEEANSAGVKVEMEIKNLKLYMENQSIIEENERLRKKAFLLHKENQVLLSQLQ

AT3G52770.1 protein binding6.0e-0554.55Show/hide
Query:  MEIKNLKLYMENQSIIEENERLRKKAFLLHKENQVLLSQL-QNFSDYKPPQSSSD
        ME  N KL++EN  I++ENERLRKKA LL++ENQ LL QL Q  S  K   + S+
Subjt:  MEIKNLKLYMENQSIIEENERLRKKAFLLHKENQVLLSQL-QNFSDYKPPQSSSD

AT3G60890.1 protein binding9.0e-0940.21Show/hide
Query:  TPSYLACRHHRRRRP-----VRVYSLLRRMRFATEEANSAGVKVEMEIKNLKLYMENQSIIEENERLRKKAFLLHKENQVLLSQLQNFSDYKPPQSS
        TP+  +  +H + +      +R+ +L RR R   E+        EME++NLKL++ENQSII ENE L+KKA LLH EN  L + L     Y P  +S
Subjt:  TPSYLACRHHRRRRP-----VRVYSLLRRMRFATEEANSAGVKVEMEIKNLKLYMENQSIIEENERLRKKAFLLHKENQVLLSQLQNFSDYKPPQSS

AT3G60890.2 protein binding9.9e-0838.04Show/hide
Query:  TPSYLACRHHRRRRPVRVYSLLRRMRFATEEANSAGVKVEMEIKNLKLYMENQSIIEENERLRKKAFLLHKENQVLLSQLQNFSDYKPPQSS
        TP+  +  +H + +  +  + LR +   +        + EME++NLKL++ENQSII ENE L+KKA LLH EN  L + L     Y P  +S
Subjt:  TPSYLACRHHRRRRPVRVYSLLRRMRFATEEANSAGVKVEMEIKNLKLYMENQSIIEENERLRKKAFLLHKENQVLLSQLQNFSDYKPPQSS


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTGCCATTCTTCCCGATTCATCCTCACTCCTTCCTATTTAGCCTGCCGCCACCATCGACGGCGGCGCCCCGTTCGAGTTTACAGCCTCTTGAGAAGGATGAGATTCGC
AACGGAAGAAGCGAATTCGGCCGGCGTTAAGGTAGAAATGGAGATCAAGAATTTGAAACTGTATATGGAGAATCAAAGCATTATTGAAGAGAACGAGAGATTGAGAAAGA
AAGCGTTTCTTCTTCACAAAGAGAATCAGGTTTTGTTATCTCAGCTTCAGAATTTCTCCGACTATAAACCACCGCAGTCTAGCTCCGATTTGAGTGCCTGCAGTTGGGAA
AGTAAACAAAATCATCTGTAG
mRNA sequenceShow/hide mRNA sequence
TTGCTACCCCCCCCCCCCCTTGCCATCATGAGTCCTACTCTCATCATTGCTATGGAAAAAAAACCCCTCTTTTTCTCTCTCTTCTTTCTCAATTTCCCCTTCTATTTATA
CTCTCAATCCCCCATTCTCCCCCATTGCTAACAATTTCTCCACCTTCATACCTCCTCAATCATGTGCCATTCTTCCCGATTCATCCTCACTCCTTCCTATTTAGCCTGCC
GCCACCATCGACGGCGGCGCCCCGTTCGAGTTTACAGCCTCTTGAGAAGGATGAGATTCGCAACGGAAGAAGCGAATTCGGCCGGCGTTAAGGTAGAAATGGAGATCAAG
AATTTGAAACTGTATATGGAGAATCAAAGCATTATTGAAGAGAACGAGAGATTGAGAAAGAAAGCGTTTCTTCTTCACAAAGAGAATCAGGTTTTGTTATCTCAGCTTCA
GAATTTCTCCGACTATAAACCACCGCAGTCTAGCTCCGATTTGAGTGCCTGCAGTTGGGAAAGTAAACAAAATCATCTGTAGCGAATGAATCAAGTAGATGATTCTTCAA
TCTTTGATAAAATTTTCTTGCTAGTGATTTCTTTTTTTTTTTTTTTTTATTTTCCTACGATTCCTTGGTTTGTAATCTGTTATTTTGACAATAAATTAGGTTTTTGATTT
TGAGGGGAAGGGAATAAAGGGTAGAATTTGGTTATTAGGGGATAGATTTTGAGAATATAGTTTATGTGATGAAATATTATGGAGCAAAACTCTGTTAGTAGTTTGTACCG
TTAAATTCGATGTTATCTAAATTCTCCATTGATGAAACAAATTTCATCCATTGAAGAAGCTTTGGTTGGTTTGATCTTGAAGCTGGAGAATGATTTGGTATTTTATCCTA
CAACTTGAATCAAATTGGTGATACAATGGGCCTTCTATG
Protein sequenceShow/hide protein sequence
MCHSSRFILTPSYLACRHHRRRRPVRVYSLLRRMRFATEEANSAGVKVEMEIKNLKLYMENQSIIEENERLRKKAFLLHKENQVLLSQLQNFSDYKPPQSSSDLSACSWE
SKQNHL