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MELO3C006185 (gene) of Melon (DHL92) v4 genome

Gene IDMELO3C006185
OrganismCucumis melo DHL92 (Melon (DHL92) v4)
DescriptionIntegrase, catalytic core
Genome locationchr06:1549381..1551651
RNA-Seq ExpressionMELO3C006185
SyntenyMELO3C006185
Gene Ontology termsGO:0015074 - DNA integration (biological process)
GO:0016021 - integral component of membrane (cellular component)
GO:0003676 - nucleic acid binding (molecular function)
GO:0008270 - zinc ion binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0063009.1 Integrase, catalytic core [Cucumis melo var. makuwa]1.1e-0477.78Show/hide
Query:  PPSLSLKPSQFCAVVSCLRLPLANSLKKASTIFRRR
        PPSLSLKPSQFCA VSCLRLPLANSLKK   + + R
Subjt:  PPSLSLKPSQFCAVVSCLRLPLANSLKKASTIFRRR
TYK16338.1 uncharacterized protein E5676_scaffold21G001200 [Cucumis melo var. makuwa]2.3e-0496.43Show/hide
Query:  PPSLSLKPSQFCAVVSCLRLPLANSLKK
        PPSLSLKPSQFCA VSCLRLPLANSLKK
Subjt:  PPSLSLKPSQFCAVVSCLRLPLANSLKK
TrEMBL top hitse value%identityAlignment
A0A5A7VBM6 Integrase, catalytic core5.1e-0577.78Show/hide
Query:  PPSLSLKPSQFCAVVSCLRLPLANSLKKASTIFRRR
        PPSLSLKPSQFCA VSCLRLPLANSLKK   + + R
Subjt:  PPSLSLKPSQFCAVVSCLRLPLANSLKKASTIFRRR
A0A5D3CYJ2 Uncharacterized protein1.1e-0496.43Show/hide
Query:  PPSLSLKPSQFCAVVSCLRLPLANSLKK
        PPSLSLKPSQFCA VSCLRLPLANSLKK
Subjt:  PPSLSLKPSQFCAVVSCLRLPLANSLKK
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
CCGCCGCCGTCTCTCTCTCTCAAGCCCTCACAATTTTGCGCCGTCGTCTCCTGCCTCCGTCTCCCTCTCGCTAACTCCCTGAAAAAAGCCTCCACAATTTTTCGCCGCCG
CCGTCTCTCTCTCGGAACGCTCTCCGGTTCAGTATCGCACGACTTTCCCTCTCCTCGCGAACGCTCTCCGGTTCAGCTTCGCCGTCTCTCTCTCGCAAGGATCCCACCAA
ACCGTGAGTTGCTTCTCCTCCCCCTTCCGTCCGTTTCGCACTGCCTTCATTCCTCCGTCTGGTTCATTCGCAGAAGGCTCACCAAACACCAAAATTCTTTAAATGGATCA
AGAGGCTGCACGAACTGCTCGGGAATCACTAGACCTTGCATTTCATATGTCTAA
mRNA sequenceShow/hide mRNA sequence
GCCGCCGCCGTCTCTCTCTCTCAAGCCCTCACAATTTTGCGCCGTCGTCTCCTGCCTCCGTCTCCCTCTCGCTAACTCCCTGAAAAAAGCCTCCACAATTTTTCGCCGCC
GCCGTCTCTCTCTCGGAACGCTCTCCGGTTCAGTATCGCACGACTTTCCCTCTCCTCGCGAACGCTCTCCGGTTCAGCTTCGCCGTCTCTCTCTCGCAAGGATCCCACCA
AACCGTGAGTTGCTTCTCCTCCCCCTTCCGTCCGTTTCGCACTGCCTTCATTCCTCCGTCTGGTTCATTCGCAGAAGGCTCACCAAACACCAAAATTCTTTAAATGGATC
AAGAGGCTGCACGAACTGCTCGGGAATCACTAGACCTTGCATTTCATATGTCTAATGTACTTGATGCCGGGATCGATCGCCACACTCTCTCTGTCCTCATTGCTCTCTGT
GACATGGGTGTGAACCCTGAAGCTTTGGCTGCTGTTGTCAAGGAACTACGGCAGGAGCCACCCGCATCAGAGACCATCATATCGGCCAGTAACAAGTCATAAGTTCCCCA
AGCAAAGAAACAACTCTGTTCTTCTGATGTAGGTTGAAATACAAATGTGTTATTTAACGATGTTGGATGGCATCTTGTGATAGATGGCTTGGTGTTTAGAATGTTCTAAG
TACACAATCTTGTGTTCATCCCTTCTCTATTTTAGCTGATTTTGTCGAAATAACAGAATTGGCACACATGTATTCTAATCAGATCTGTTGGAATGAGAGTGAGGGTTGAT
CATGTCGGTATGCTTTTCCATTCATTTACGCATTGCAATTGTGCTTCAAGCGATGGTCCCAGTTACATAGCT
Protein sequenceShow/hide protein sequence
PPPSLSLKPSQFCAVVSCLRLPLANSLKKASTIFRRRRLSLGTLSGSVSHDFPSPRERSPVQLRRLSLARIPPNRELLLLPLPSVSHCLHSSVWFIRRRLTKHQNSLNGS
RGCTNCSGITRPCISYV