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MELO3C006209 (gene) of Melon (DHL92) v4 genome

Gene IDMELO3C006209
OrganismCucumis melo DHL92 (Melon (DHL92) v4)
Descriptionchromo domain protein LHP1-like
Genome locationchr06:1712755..1715579
RNA-Seq ExpressionMELO3C006209
SyntenyMELO3C006209
Gene Ontology termsGO:0006325 - chromatin organization (biological process)
GO:0000792 - heterochromatin (cellular component)
GO:0005634 - nucleus (cellular component)
GO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0049056.1 chromo domain protein LHP1-like [Cucumis melo var. makuwa]8.5e-5182.98Show/hide
Query:  MGRGKKKAAGSSEPETVALPSPDFTQSTHLNGDSAPSISNNNGSELKIPFPHPPSSLHNASVQIPLPTDDAGVVNGEDNAVPDVSASERTNLDEGFFEVE
        MGRGKKKAAGSSEPETVALPSPDFTQSTHLNGDSAPSISNNNGSELKI FPHPPSSLHNASVQIPLPTDDAGVVNGEDNAVPDVSASERTNLDEGFFEVE
Subjt:  MGRGKKKAAGSSEPETVALPSPDFTQSTHLNGDSAPSISNNNGSELKIPFPHPPSSLHNASVQIPLPTDDAGVVNGEDNAVPDVSASERTNLDEGFFEVE

Query:  AIRRKRVRKELVSYFGHSIRKIMECECTCEIVDVYESVDSF
        AIRRKRVRK  +  F    R   E E T E +D  +S   F
Subjt:  AIRRKRVRKELVSYFGHSIRKIMECECTCEIVDVYESVDSF

KGN56653.2 hypothetical protein Csa_009693 [Cucumis sativus]2.6e-4775.82Show/hide
Query:  EGKERKGGIERKMGRGKKKAAGSSEPETVALPSPDFTQSTHLNGDSAPSISNNNGSELKIPFPHPPSSLHNASVQIPLPTDDAGVVNGEDNAVPDVSASE
        +GKER+     KMGRGKKKAAGSSEPETVALP PDFTQSTHLNGDSAPSISNNNGSE KI FPH PSSLHNASVQIPLP DDAGVVNGEDN +PDVSASE
Subjt:  EGKERKGGIERKMGRGKKKAAGSSEPETVALPSPDFTQSTHLNGDSAPSISNNNGSELKIPFPHPPSSLHNASVQIPLPTDDAGVVNGEDNAVPDVSASE

Query:  RTNLDEGFFEVEAIRRKRVRKELVSYFGHSIRKIMECECTCEIVDVYESVDSF
        RTNLDEGFFEVEAIRRKRVRK  + Y     R   E E T E +D  +S   F
Subjt:  RTNLDEGFFEVEAIRRKRVRKELVSYFGHSIRKIMECECTCEIVDVYESVDSF

TYK17507.1 chromo domain protein LHP1-like [Cucumis melo var. makuwa]8.5e-5182.98Show/hide
Query:  MGRGKKKAAGSSEPETVALPSPDFTQSTHLNGDSAPSISNNNGSELKIPFPHPPSSLHNASVQIPLPTDDAGVVNGEDNAVPDVSASERTNLDEGFFEVE
        MGRGKKKAAGSSEPETVALPSPDFTQSTHLNGDSAPSISNNNGSELKI FPHPPSSLHNASVQIPLPTDDAGVVNGEDNAVPDVSASERTNLDEGFFEVE
Subjt:  MGRGKKKAAGSSEPETVALPSPDFTQSTHLNGDSAPSISNNNGSELKIPFPHPPSSLHNASVQIPLPTDDAGVVNGEDNAVPDVSASERTNLDEGFFEVE

Query:  AIRRKRVRKELVSYFGHSIRKIMECECTCEIVDVYESVDSF
        AIRRKRVRK  + Y     R   E E T E +D  +S   F
Subjt:  AIRRKRVRKELVSYFGHSIRKIMECECTCEIVDVYESVDSF

XP_008438194.2 PREDICTED: chromo domain protein LHP1-like [Cucumis melo]3.8e-5985.26Show/hide
Query:  MKREGKERKGGIERKMGRGKKKAAGSSEPETVALPSPDFTQSTHLNGDSAPSISNNNGSELKIPFPHPPSSLHNASVQIPLPTDDAGVVNGEDNAVPDVS
        MKREGKERKGGIERKMGRGKKKAAGSSEPETVALPSPDFTQSTHLNGDSAPSISNNNGSELKIPFPHPPSSLHNASVQIPLPTDDAGVVNGEDNAVPDVS
Subjt:  MKREGKERKGGIERKMGRGKKKAAGSSEPETVALPSPDFTQSTHLNGDSAPSISNNNGSELKIPFPHPPSSLHNASVQIPLPTDDAGVVNGEDNAVPDVS

Query:  ASERTNLDEGFFEVEAIRRKRVRKELVSYFGHSIRKIMECECTCEIVDVYESVDSF
        ASERTNLDEGFFEVEAIRRKRVRK  + Y     R   E E T E +D  +S   F
Subjt:  ASERTNLDEGFFEVEAIRRKRVRKELVSYFGHSIRKIMECECTCEIVDVYESVDSF

XP_011650798.1 chromo domain-containing protein LHP1 isoform X1 [Cucumis sativus]7.5e-4778.72Show/hide
Query:  MGRGKKKAAGSSEPETVALPSPDFTQSTHLNGDSAPSISNNNGSELKIPFPHPPSSLHNASVQIPLPTDDAGVVNGEDNAVPDVSASERTNLDEGFFEVE
        MGRGKKKAAGSSEPETVALP PDFTQSTHLNGDSAPSISNNNGSE KI FPH PSSLHNASVQIPLP DDAGVVNGEDN +PDVSASERTNLDEGFFEVE
Subjt:  MGRGKKKAAGSSEPETVALPSPDFTQSTHLNGDSAPSISNNNGSELKIPFPHPPSSLHNASVQIPLPTDDAGVVNGEDNAVPDVSASERTNLDEGFFEVE

Query:  AIRRKRVRKELVSYFGHSIRKIMECECTCEIVDVYESVDSF
        AIRRKRVRK  + Y     R   E E T E +D  +S   F
Subjt:  AIRRKRVRKELVSYFGHSIRKIMECECTCEIVDVYESVDSF

TrEMBL top hitse value%identityAlignment
A0A0A0L6G7 Chromo domain-containing protein3.6e-4778.72Show/hide
Query:  MGRGKKKAAGSSEPETVALPSPDFTQSTHLNGDSAPSISNNNGSELKIPFPHPPSSLHNASVQIPLPTDDAGVVNGEDNAVPDVSASERTNLDEGFFEVE
        MGRGKKKAAGSSEPETVALP PDFTQSTHLNGDSAPSISNNNGSE KI FPH PSSLHNASVQIPLP DDAGVVNGEDN +PDVSASERTNLDEGFFEVE
Subjt:  MGRGKKKAAGSSEPETVALPSPDFTQSTHLNGDSAPSISNNNGSELKIPFPHPPSSLHNASVQIPLPTDDAGVVNGEDNAVPDVSASERTNLDEGFFEVE

Query:  AIRRKRVRKELVSYFGHSIRKIMECECTCEIVDVYESVDSF
        AIRRKRVRK  + Y     R   E E T E +D  +S   F
Subjt:  AIRRKRVRKELVSYFGHSIRKIMECECTCEIVDVYESVDSF

A0A1S3AVS6 chromo domain protein LHP1-like1.8e-5985.26Show/hide
Query:  MKREGKERKGGIERKMGRGKKKAAGSSEPETVALPSPDFTQSTHLNGDSAPSISNNNGSELKIPFPHPPSSLHNASVQIPLPTDDAGVVNGEDNAVPDVS
        MKREGKERKGGIERKMGRGKKKAAGSSEPETVALPSPDFTQSTHLNGDSAPSISNNNGSELKIPFPHPPSSLHNASVQIPLPTDDAGVVNGEDNAVPDVS
Subjt:  MKREGKERKGGIERKMGRGKKKAAGSSEPETVALPSPDFTQSTHLNGDSAPSISNNNGSELKIPFPHPPSSLHNASVQIPLPTDDAGVVNGEDNAVPDVS

Query:  ASERTNLDEGFFEVEAIRRKRVRKELVSYFGHSIRKIMECECTCEIVDVYESVDSF
        ASERTNLDEGFFEVEAIRRKRVRK  + Y     R   E E T E +D  +S   F
Subjt:  ASERTNLDEGFFEVEAIRRKRVRKELVSYFGHSIRKIMECECTCEIVDVYESVDSF

A0A5A7U472 Chromo domain protein LHP1-like4.1e-5182.98Show/hide
Query:  MGRGKKKAAGSSEPETVALPSPDFTQSTHLNGDSAPSISNNNGSELKIPFPHPPSSLHNASVQIPLPTDDAGVVNGEDNAVPDVSASERTNLDEGFFEVE
        MGRGKKKAAGSSEPETVALPSPDFTQSTHLNGDSAPSISNNNGSELKI FPHPPSSLHNASVQIPLPTDDAGVVNGEDNAVPDVSASERTNLDEGFFEVE
Subjt:  MGRGKKKAAGSSEPETVALPSPDFTQSTHLNGDSAPSISNNNGSELKIPFPHPPSSLHNASVQIPLPTDDAGVVNGEDNAVPDVSASERTNLDEGFFEVE

Query:  AIRRKRVRKELVSYFGHSIRKIMECECTCEIVDVYESVDSF
        AIRRKRVRK  +  F    R   E E T E +D  +S   F
Subjt:  AIRRKRVRKELVSYFGHSIRKIMECECTCEIVDVYESVDSF

A0A5D3D0R0 Chromo domain protein LHP1-like4.1e-5182.98Show/hide
Query:  MGRGKKKAAGSSEPETVALPSPDFTQSTHLNGDSAPSISNNNGSELKIPFPHPPSSLHNASVQIPLPTDDAGVVNGEDNAVPDVSASERTNLDEGFFEVE
        MGRGKKKAAGSSEPETVALPSPDFTQSTHLNGDSAPSISNNNGSELKI FPHPPSSLHNASVQIPLPTDDAGVVNGEDNAVPDVSASERTNLDEGFFEVE
Subjt:  MGRGKKKAAGSSEPETVALPSPDFTQSTHLNGDSAPSISNNNGSELKIPFPHPPSSLHNASVQIPLPTDDAGVVNGEDNAVPDVSASERTNLDEGFFEVE

Query:  AIRRKRVRKELVSYFGHSIRKIMECECTCEIVDVYESVDSF
        AIRRKRVRK  + Y     R   E E T E +D  +S   F
Subjt:  AIRRKRVRKELVSYFGHSIRKIMECECTCEIVDVYESVDSF

A0A6J1GGE8 chromo domain-containing protein LHP1-like5.8e-2952.9Show/hide
Query:  MGRGKKKAAGSSEPETVALPSPDFTQSTHLNGDSAPSISNNNGSELKIPFPHPPSSLHNASVQIPLPTDDAGVVNGEDNAVPDVSASERTNLDEGFFEVE
        MGRGKKKA GSSE E +ALP P FT ST +NGDSAPS SNNNG+ELKI    P SS+ N+SVQ PL   + G V+GE+NAV DV+ASE T LD+GFF VE
Subjt:  MGRGKKKAAGSSEPETVALPSPDFTQSTHLNGDSAPSISNNNGSELKIPFPHPPSSLHNASVQIPLPTDDAGVVNGEDNAVPDVSASERTNLDEGFFEVE

Query:  AIRRKRVRKELVSYFGHSIRKIMECECTCEIVDVYESVDSFNTSSNGVYDFELSM
        AIRRKRVRK  + Y       +++     E  + +E  D+  + +  + +FE  M
Subjt:  AIRRKRVRKELVSYFGHSIRKIMECECTCEIVDVYESVDSFNTSSNGVYDFELSM

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT5G17690.1 like heterochromatin protein (LHP1)6.4e-0447.83Show/hide
Query:  DDAGVVNGEDNAVPDVSASERTNLDEGFFEVEAIRRKRVRKELVSY
        +D G    ++    +    ER  LDEGF+E+EAIRRKRVRK  V Y
Subjt:  DDAGVVNGEDNAVPDVSASERTNLDEGFFEVEAIRRKRVRKELVSY


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAAAGAGAGGGAAAGGAAAGGAAAGGAGGGATAGAACGAAAAATGGGGAGAGGGAAGAAGAAAGCGGCGGGAAGTTCTGAACCCGAAACAGTGGCGCTTCCAAGCCC
CGATTTCACTCAATCAACTCATCTTAATGGCGATTCAGCCCCTTCAATCTCTAACAACAATGGCAGTGAACTCAAAATTCCATTTCCACATCCACCTTCTTCACTTCACA
ATGCTTCTGTGCAAATTCCACTACCCACCGACGACGCCGGAGTGGTCAACGGCGAAGACAATGCCGTACCTGATGTTTCTGCTTCTGAACGTACTAACCTAGATGAAGGC
TTCTTCGAAGTTGAAGCTATTCGGCGGAAAAGAGTTCGTAAGGAATTGGTTAGCTATTTTGGTCACTCTATTCGTAAAATTATGGAATGTGAATGTACTTGCGAAATTGT
AGATGTTTATGAGAGTGTGGACAGCTTCAATACCTCGTCAAATGGTGTGTACGATTTTGAGCTATCGATGTCATTTGTTCTTGATATACGTGAAAGTAGCTTCAGGAATT
TGTTTTTGACAGGCGTGGTTGGCCAGAGACAGAAAATACGTGGGAACCCTTGGACAATCTCCAATCATGCTTTGAATTTATTGAAGAATATGAAGAAAGGTTTTGTCACT
CGCGATCGGGAAAGCAGCGGAAGCGGAAGCGCAAGGATGGAGACATTGAAAGTGAATCTCAAGAGGAAAAAGATCTCCAAATTATAG
mRNA sequenceShow/hide mRNA sequence
ATGAAAAGAGAGGGAAAGGAAAGGAAAGGAGGGATAGAACGAAAAATGGGGAGAGGGAAGAAGAAAGCGGCGGGAAGTTCTGAACCCGAAACAGTGGCGCTTCCAAGCCC
CGATTTCACTCAATCAACTCATCTTAATGGCGATTCAGCCCCTTCAATCTCTAACAACAATGGCAGTGAACTCAAAATTCCATTTCCACATCCACCTTCTTCACTTCACA
ATGCTTCTGTGCAAATTCCACTACCCACCGACGACGCCGGAGTGGTCAACGGCGAAGACAATGCCGTACCTGATGTTTCTGCTTCTGAACGTACTAACCTAGATGAAGGC
TTCTTCGAAGTTGAAGCTATTCGGCGGAAAAGAGTTCGTAAGGAATTGGTTAGCTATTTTGGTCACTCTATTCGTAAAATTATGGAATGTGAATGTACTTGCGAAATTGT
AGATGTTTATGAGAGTGTGGACAGCTTCAATACCTCGTCAAATGGTGTGTACGATTTTGAGCTATCGATGTCATTTGTTCTTGATATACGTGAAAGTAGCTTCAGGAATT
TGTTTTTGACAGGCGTGGTTGGCCAGAGACAGAAAATACGTGGGAACCCTTGGACAATCTCCAATCATGCTTTGAATTTATTGAAGAATATGAAGAAAGGTTTTGTCACT
CGCGATCGGGAAAGCAGCGGAAGCGGAAGCGCAAGGATGGAGACATTGAAAGTGAATCTCAAGAGGAAAAAGATCTCCAAATTATAGCTATTGATAATGTGACGGATGTA
GTTATCAATACTCTGGATGATCGTCTATCTGCCGCTCCATTGAACAAGAAACTTCATCGTGATCTTCCTATTCCTCAAGAACCGTTAGACTCTATTCATGAAGGAGAGTT
GGATGAGAAATTTGATGGAAGTAGAAAGAGAGACGAATATGATGTGAAACTTATCGACTTCAATGCATCGATGTCTGGGAATATGGTTGATTCTGATAAAAAAACAGTGG
CTTCTAACGATGTTAGCCTTGTTTACGATGTTTCCAAGGCCGATTGCGTGGTGGGTTCTGCTCAGGGAAGTCACTCCACTGGAGCCAAGAGAAGGAAGTCCAGTAGGGTG
AAAAGGTTCACGAAGGATTCAGCCTTGTCAGAACAAGGATTAAAACAAAATGCAGCAACTGTAGGCATTGAGCCTACTGATCCAAGCGAACAATTAGGACCCCAGAATCC
TAGTTCGTCAGGCCACTCCAGAAATGTGTCTACCATCACAAGGATTATCAGGCCTGTTGGTTATTCAGTTTCAGTATTAAATAACATCCCAGATGTAATCGTAACCTTCT
TGGTTGTGAGGTCGGATGGAAAAGAAGTGACGGTGAATAACAAGTTTCTTAAAGCTAACAATCCACATCTGTTGATTAACTACTATGAGCAACATCTCCGATATAATCCT
ACATTATGAAAGAACTGCACTTGTGTCTGGCCACCACCATCATCTTCGTGGTTTACAAGCTGTAATTTTGTAGTTTTAGGAGATTCAGTGAAATACATTATGAATTATCG
GTAAATTTTCAACTGTCAAGAGGAGATCAGACTATTTTCCGTCTCCGTTTAATTCTAATATGGGGATGAATGGAAAGTTATATTCTTTTTGAATATTGAAGTTCCTATCT
CAAACAATTTAAAGACTTGGTGAATCGAACTATGAACTTGTAACCTCCCTAACAAAAAAAAAAAAAAAAAAAAAAAAATCTCCAAGGGCAAGAGGCTGTTTGCTCATAAC
CTTGCAAGACATTGTCATTCGTTTCCCCTATAATCCTGCTTTTACAGATATTTTCCAGTGTTGCAGTTTACTGTTCAAGTGATCCTATCTGCTACCCAGATGCTGAGTGT
TCAATGAGCTACGGGATGCTTATTTATCAGGTTCTTTCTTGGTCTCCATCCATATTATTTTATTATGTCAAATAGAATAAAGTACATGTATTGGACGGTTCTGGACTTCC
AACTGCTCCCGCAAATAATAAATCTGAACCTCTTGACTTTGGCATATTATTTTATCTGTATGCCACCTATGATGTCATTCAAACACATTTTTCATTTAACTAAATGTCAT
TATCTAACATTATTTAATTTTAAT
Protein sequenceShow/hide protein sequence
MKREGKERKGGIERKMGRGKKKAAGSSEPETVALPSPDFTQSTHLNGDSAPSISNNNGSELKIPFPHPPSSLHNASVQIPLPTDDAGVVNGEDNAVPDVSASERTNLDEG
FFEVEAIRRKRVRKELVSYFGHSIRKIMECECTCEIVDVYESVDSFNTSSNGVYDFELSMSFVLDIRESSFRNLFLTGVVGQRQKIRGNPWTISNHALNLLKNMKKGFVT
RDRESSGSGSARMETLKVNLKRKKISKL