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MELO3C006232 (gene) of Melon (DHL92) v4 genome

Gene IDMELO3C006232
OrganismCucumis melo DHL92 (Melon (DHL92) v4)
DescriptionLate embryogenesis abundant protein
Genome locationchr06:1856144..1857437
RNA-Seq ExpressionMELO3C006232
SyntenyMELO3C006232
Gene Ontology termsGO:0009793 - embryo development ending in seed dormancy (biological process)
InterPro domainsIPR005513 - Late embryogenesis abundant protein, LEA_1 subgroup


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004134355.1 late embryogenesis abundant protein 6 [Cucumis sativus]1.0e-4994.31Show/hide
Query:  MQAVKEKLHDMSVMRKAKAEAKAEEKAEKELAKARVEVAHEVRLAREAEAAMDLHVAKAGMKAEKEMAKYADTHTNTFVAPGGTVTPPDYSANVPVAPGM
        MQAV+EKLHDMSVMRKAKAEAKAEEKAEKELAKARVEVAHEVRLAREAEAAMDLHVAKAGMKAEKEMAKYADTHTNTFV+PGGT T PDYS  VPVAPGM
Subjt:  MQAVKEKLHDMSVMRKAKAEAKAEEKAEKELAKARVEVAHEVRLAREAEAAMDLHVAKAGMKAEKEMAKYADTHTNTFVAPGGTVTPPDYSANVPVAPGM

Query:  TMVGAPGTVDMAGAPSPANKKLL
        TMVGAPGTVDMAGAPSP NKKLL
Subjt:  TMVGAPGTVDMAGAPSPANKKLL
XP_008438228.1 PREDICTED: uncharacterized protein LOC103483397 [Cucumis melo]3.7e-55100Show/hide
Query:  MQAVKEKLHDMSVMRKAKAEAKAEEKAEKELAKARVEVAHEVRLAREAEAAMDLHVAKAGMKAEKEMAKYADTHTNTFVAPGGTVTPPDYSANVPVAPGM
        MQAVKEKLHDMSVMRKAKAEAKAEEKAEKELAKARVEVAHEVRLAREAEAAMDLHVAKAGMKAEKEMAKYADTHTNTFVAPGGTVTPPDYSANVPVAPGM
Subjt:  MQAVKEKLHDMSVMRKAKAEAKAEEKAEKELAKARVEVAHEVRLAREAEAAMDLHVAKAGMKAEKEMAKYADTHTNTFVAPGGTVTPPDYSANVPVAPGM

Query:  TMVGAPGTVDMAGAPSPANKKLL
        TMVGAPGTVDMAGAPSPANKKLL
Subjt:  TMVGAPGTVDMAGAPSPANKKLL
XP_022924652.1 late embryogenesis abundant protein 6-like [Cucurbita moschata]3.6e-3475.81Show/hide
Query:  MQAVKEKLHDMSVMRKAKAEAKAEEKAEKELAKARVEVAHEVRLAREAEAAMDLHVAKAGMKAEKEMAKYADTHTNTFVAPG-GTVTPPDYSANVPVAPG
        MQAV++KLHD++ MRKAK+EAKAEEKAEKELAKARVEVAHEVRLAREAEAAM LHVAKAG +AEKEMAK+A+ HTN FVAPG GT T      NV  APG
Subjt:  MQAVKEKLHDMSVMRKAKAEAKAEEKAEKELAKARVEVAHEVRLAREAEAAMDLHVAKAGMKAEKEMAKYADTHTNTFVAPG-GTVTPPDYSANVPVAPG

Query:  MTMVGAPGTVDMAGAPSPANKKLL
        +TMVGAPGTVDMAG P   +KK L
Subjt:  MTMVGAPGTVDMAGAPSPANKKLL
XP_022980446.1 late embryogenesis abundant protein 6-like [Cucurbita maxima]1.0e-3375Show/hide
Query:  MQAVKEKLHDMSVMRKAKAEAKAEEKAEKELAKARVEVAHEVRLAREAEAAMDLHVAKAGMKAEKEMAKYADTHTNTFVAPG-GTVTPPDYSANVPVAPG
        MQAV++KLHD++ MRKAK+EAKAEEKAEKELAKARVEVAHEVRLAREAEAAM LHVAKAG +AEKEMAK+A+ HTN FVAPG GT T      NV  APG
Subjt:  MQAVKEKLHDMSVMRKAKAEAKAEEKAEKELAKARVEVAHEVRLAREAEAAMDLHVAKAGMKAEKEMAKYADTHTNTFVAPG-GTVTPPDYSANVPVAPG

Query:  MTMVGAPGTVDMAGAPSPANKKLL
        +TMVGAPGTVDM G P   +KK L
Subjt:  MTMVGAPGTVDMAGAPSPANKKLL
XP_038878054.1 late embryogenesis abundant protein 6-like [Benincasa hispida]1.2e-4083.74Show/hide
Query:  MQAVKEKLHDMSVMRKAKAEAKAEEKAEKELAKARVEVAHEVRLAREAEAAMDLHVAKAGMKAEKEMAKYADTHTNTFVAPGGTVTPPDYSANVPVAPGM
        MQAVK+KLHD+SVMRKAKAEAKAEEKAEKELAKARVEVAHEVRLAREAEAAMDLHVAKAGMKAEKEM KYA+THT+TFVAPGGT    D +A++ VAPG+
Subjt:  MQAVKEKLHDMSVMRKAKAEAKAEEKAEKELAKARVEVAHEVRLAREAEAAMDLHVAKAGMKAEKEMAKYADTHTNTFVAPGGTVTPPDYSANVPVAPGM

Query:  TMVGAPGTVDMAGAPSPANKKLL
        T+V APGTV+MAGAP P NKKLL
Subjt:  TMVGAPGTVDMAGAPSPANKKLL
TrEMBL top hitse value%identityAlignment
A0A0A0L6I7 Uncharacterized protein5.0e-5094.31Show/hide
Query:  MQAVKEKLHDMSVMRKAKAEAKAEEKAEKELAKARVEVAHEVRLAREAEAAMDLHVAKAGMKAEKEMAKYADTHTNTFVAPGGTVTPPDYSANVPVAPGM
        MQAV+EKLHDMSVMRKAKAEAKAEEKAEKELAKARVEVAHEVRLAREAEAAMDLHVAKAGMKAEKEMAKYADTHTNTFV+PGGT T PDYS  VPVAPGM
Subjt:  MQAVKEKLHDMSVMRKAKAEAKAEEKAEKELAKARVEVAHEVRLAREAEAAMDLHVAKAGMKAEKEMAKYADTHTNTFVAPGGTVTPPDYSANVPVAPGM

Query:  TMVGAPGTVDMAGAPSPANKKLL
        TMVGAPGTVDMAGAPSP NKKLL
Subjt:  TMVGAPGTVDMAGAPSPANKKLL
A0A1S3AWI7 uncharacterized protein LOC1034833971.8e-55100Show/hide
Query:  MQAVKEKLHDMSVMRKAKAEAKAEEKAEKELAKARVEVAHEVRLAREAEAAMDLHVAKAGMKAEKEMAKYADTHTNTFVAPGGTVTPPDYSANVPVAPGM
        MQAVKEKLHDMSVMRKAKAEAKAEEKAEKELAKARVEVAHEVRLAREAEAAMDLHVAKAGMKAEKEMAKYADTHTNTFVAPGGTVTPPDYSANVPVAPGM
Subjt:  MQAVKEKLHDMSVMRKAKAEAKAEEKAEKELAKARVEVAHEVRLAREAEAAMDLHVAKAGMKAEKEMAKYADTHTNTFVAPGGTVTPPDYSANVPVAPGM

Query:  TMVGAPGTVDMAGAPSPANKKLL
        TMVGAPGTVDMAGAPSPANKKLL
Subjt:  TMVGAPGTVDMAGAPSPANKKLL
A0A5A7U624 Late embryogenesis abundant protein1.8e-55100Show/hide
Query:  MQAVKEKLHDMSVMRKAKAEAKAEEKAEKELAKARVEVAHEVRLAREAEAAMDLHVAKAGMKAEKEMAKYADTHTNTFVAPGGTVTPPDYSANVPVAPGM
        MQAVKEKLHDMSVMRKAKAEAKAEEKAEKELAKARVEVAHEVRLAREAEAAMDLHVAKAGMKAEKEMAKYADTHTNTFVAPGGTVTPPDYSANVPVAPGM
Subjt:  MQAVKEKLHDMSVMRKAKAEAKAEEKAEKELAKARVEVAHEVRLAREAEAAMDLHVAKAGMKAEKEMAKYADTHTNTFVAPGGTVTPPDYSANVPVAPGM

Query:  TMVGAPGTVDMAGAPSPANKKLL
        TMVGAPGTVDMAGAPSPANKKLL
Subjt:  TMVGAPGTVDMAGAPSPANKKLL
A0A6J1ED39 late embryogenesis abundant protein 6-like1.7e-3475.81Show/hide
Query:  MQAVKEKLHDMSVMRKAKAEAKAEEKAEKELAKARVEVAHEVRLAREAEAAMDLHVAKAGMKAEKEMAKYADTHTNTFVAPG-GTVTPPDYSANVPVAPG
        MQAV++KLHD++ MRKAK+EAKAEEKAEKELAKARVEVAHEVRLAREAEAAM LHVAKAG +AEKEMAK+A+ HTN FVAPG GT T      NV  APG
Subjt:  MQAVKEKLHDMSVMRKAKAEAKAEEKAEKELAKARVEVAHEVRLAREAEAAMDLHVAKAGMKAEKEMAKYADTHTNTFVAPG-GTVTPPDYSANVPVAPG

Query:  MTMVGAPGTVDMAGAPSPANKKLL
        +TMVGAPGTVDMAG P   +KK L
Subjt:  MTMVGAPGTVDMAGAPSPANKKLL
A0A6J1IRE5 late embryogenesis abundant protein 6-like5.1e-3475Show/hide
Query:  MQAVKEKLHDMSVMRKAKAEAKAEEKAEKELAKARVEVAHEVRLAREAEAAMDLHVAKAGMKAEKEMAKYADTHTNTFVAPG-GTVTPPDYSANVPVAPG
        MQAV++KLHD++ MRKAK+EAKAEEKAEKELAKARVEVAHEVRLAREAEAAM LHVAKAG +AEKEMAK+A+ HTN FVAPG GT T      NV  APG
Subjt:  MQAVKEKLHDMSVMRKAKAEAKAEEKAEKELAKARVEVAHEVRLAREAEAAMDLHVAKAGMKAEKEMAKYADTHTNTFVAPG-GTVTPPDYSANVPVAPG

Query:  MTMVGAPGTVDMAGAPSPANKKLL
        +TMVGAPGTVDM G P   +KK L
Subjt:  MTMVGAPGTVDMAGAPSPANKKLL
SwissProt top hitse value%identityAlignment
Q39138 Late embryogenesis abundant protein 65.6e-0646.84Show/hide
Query:  MQAVKEKLHDMSVMRKAK---AEAKAEEKAEKELA--KARVEVAHEVRLAREAEAAMDLHVAKAGMKAEKEMAKYADTH
        MQ+ K+K+ DM+   K K    +AKA+EKAE+ +A  K   E+AH+ R A+EAEA MD+H+AKA    +K MAK +  H
Subjt:  MQAVKEKLHDMSVMRKAK---AEAKAEEKAEKELA--KARVEVAHEVRLAREAEAAMDLHVAKAGMKAEKEMAKYADTH
Arabidopsis top hitse value%identityAlignment
AT1G32560.1 Late embryogenesis abundant protein, group 1 protein4.0e-0746.84Show/hide
Query:  MQAVKEKLHDMSVMRKAK---AEAKAEEKAEKELA--KARVEVAHEVRLAREAEAAMDLHVAKAGMKAEKEMAKYADTH
        MQ+ K+K+ DM+   K K    +AKA+EKAE+ +A  K   E+AH+ R A+EAEA MD+H+AKA    +K MAK +  H
Subjt:  MQAVKEKLHDMSVMRKAK---AEAKAEEKAEKELA--KARVEVAHEVRLAREAEAAMDLHVAKAGMKAEKEMAKYADTH

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCAAGCAGTAAAGGAGAAGCTACACGATATGAGCGTCATGCGCAAGGCCAAGGCCGAGGCAAAGGCCGAAGAGAAGGCAGAGAAGGAGCTAGCAAAAGCAAGAGTGGA
AGTGGCTCATGAGGTAAGATTGGCAAGAGAGGCTGAAGCTGCAATGGATCTTCATGTAGCCAAAGCTGGAATGAAGGCTGAGAAAGAGATGGCTAAGTATGCTGATACTC
ACACCAATACCTTCGTGGCTCCGGGCGGAACCGTCACCCCTCCTGATTACTCCGCAAACGTACCAGTCGCTCCCGGCATGACTATGGTTGGAGCCCCCGGCACCGTCGAC
ATGGCCGGAGCTCCTTCTCCCGCTAATAAGAAGTTACTGTAA
mRNA sequenceShow/hide mRNA sequence
TTCTCTATAGAGCTTTCTAAAGACTGAATCCAAAGAGAGAAGCTTCAATTTCTACCAGTTCGGAAACAAAAAGATGCAAGCAGTAAAGGAGAAGCTACACGATATGAGCG
TCATGCGCAAGGCCAAGGCCGAGGCAAAGGCCGAAGAGAAGGCAGAGAAGGAGCTAGCAAAAGCAAGAGTGGAAGTGGCTCATGAGGTAAGATTGGCAAGAGAGGCTGAA
GCTGCAATGGATCTTCATGTAGCCAAAGCTGGAATGAAGGCTGAGAAAGAGATGGCTAAGTATGCTGATACTCACACCAATACCTTCGTGGCTCCGGGCGGAACCGTCAC
CCCTCCTGATTACTCCGCAAACGTACCAGTCGCTCCCGGCATGACTATGGTTGGAGCCCCCGGCACCGTCGACATGGCCGGAGCTCCTTCTCCCGCTAATAAGAAGTTAC
TGTAAAAAGAAGTTCTTGTGTAACGCCATGCATAAAAAGATCCATCTTTGATTTTGCAAATAATGTACTTTGATTTAATTTGTTCTCTTTTTTCTACAAGTTCTATATTA
TTCTACCACATCTTTAGATGTTGTGTAGTATATATATATATATATATATTGTAATCAATACACACAACAG
Protein sequenceShow/hide protein sequence
MQAVKEKLHDMSVMRKAKAEAKAEEKAEKELAKARVEVAHEVRLAREAEAAMDLHVAKAGMKAEKEMAKYADTHTNTFVAPGGTVTPPDYSANVPVAPGMTMVGAPGTVD
MAGAPSPANKKLL