; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

MELO3C006272 (gene) of Melon (DHL92) v4 genome

Gene IDMELO3C006272
OrganismCucumis melo DHL92 (Melon (DHL92) v4)
DescriptionPentatricopeptide repeat-containing protein
Genome locationchr06:2130609..2131863
RNA-Seq ExpressionMELO3C006272
SyntenyMELO3C006272
Gene Ontology termsGO:0005515 - protein binding (molecular function)
InterPro domainsIPR002885 - Pentatricopeptide repeat
IPR011990 - Tetratricopeptide-like helical domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0049114.1 pentatricopeptide repeat-containing protein [Cucumis melo var. makuwa]1.4e-192100Show/hide
Query:  MFVNVRRLQNSFKVHWSSSLSSSQTLIPKFFNEYYYSSDSSTRSFDYIAQFLPSNDGTLKLISVNSVTTNDRRRVSVGLSKAVKLPQGYVLKGLSRNFCP
        MFVNVRRLQNSFKVHWSSSLSSSQTLIPKFFNEYYYSSDSSTRSFDYIAQFLPSNDGTLKLISVNSVTTNDRRRVSVGLSKAVKLPQGYVLKGLSRNFCP
Subjt:  MFVNVRRLQNSFKVHWSSSLSSSQTLIPKFFNEYYYSSDSSTRSFDYIAQFLPSNDGTLKLISVNSVTTNDRRRVSVGLSKAVKLPQGYVLKGLSRNFCP

Query:  FLLVKIMKLFECRETAFAFFKLAFKDDSEETVKSCCVLAHLLAAEQLRFLAQDIVSWVVARIGPGRSKNLAAFMWEGHRMYESDFSVLNTLMRAFMKSEM
        FLLVKIMKLFECRETAFAFFKLAFKDDSEETVKSCCVLAHLLAAEQLRFLAQDIVSWVVARIGPGRSKNLAAFMWEGHRMYESDFSVLNTLMRAFMKSEM
Subjt:  FLLVKIMKLFECRETAFAFFKLAFKDDSEETVKSCCVLAHLLAAEQLRFLAQDIVSWVVARIGPGRSKNLAAFMWEGHRMYESDFSVLNTLMRAFMKSEM

Query:  HFEALEILSKMREVGVTPNPSAISILFRLLIRAGDCGAVWKLFGDVVRKGPCPNNFIFNLLILEFCRKGWTRIGEALLHVMGKFRCEPDVYSYNIVIHAN
        HFEALEILSKMREVGVTPNPSAISILFRLLIRAGDCGAVWKLFGDVVRKGPCPNNFIFNLLILEFCRKGWTRIGEALLHVMGKFRCEPDVYSYNIVIHAN
Subjt:  HFEALEILSKMREVGVTPNPSAISILFRLLIRAGDCGAVWKLFGDVVRKGPCPNNFIFNLLILEFCRKGWTRIGEALLHVMGKFRCEPDVYSYNIVIHAN

Query:  CLKGQSSYALHLVNLMIANDCKPSIATFCTIIDAFCKE
        CLKGQSSYALHLVNLMIANDCKPSIATFCTIIDAFCKE
Subjt:  CLKGQSSYALHLVNLMIANDCKPSIATFCTIIDAFCKE

TYK17450.1 pentatricopeptide repeat-containing protein [Cucumis melo var. makuwa]1.4e-187100Show/hide
Query:  NSFKVHWSSSLSSSQTLIPKFFNEYYYSSDSSTRSFDYIAQFLPSNDGTLKLISVNSVTTNDRRRVSVGLSKAVKLPQGYVLKGLSRNFCPFLLVKIMKL
        NSFKVHWSSSLSSSQTLIPKFFNEYYYSSDSSTRSFDYIAQFLPSNDGTLKLISVNSVTTNDRRRVSVGLSKAVKLPQGYVLKGLSRNFCPFLLVKIMKL
Subjt:  NSFKVHWSSSLSSSQTLIPKFFNEYYYSSDSSTRSFDYIAQFLPSNDGTLKLISVNSVTTNDRRRVSVGLSKAVKLPQGYVLKGLSRNFCPFLLVKIMKL

Query:  FECRETAFAFFKLAFKDDSEETVKSCCVLAHLLAAEQLRFLAQDIVSWVVARIGPGRSKNLAAFMWEGHRMYESDFSVLNTLMRAFMKSEMHFEALEILS
        FECRETAFAFFKLAFKDDSEETVKSCCVLAHLLAAEQLRFLAQDIVSWVVARIGPGRSKNLAAFMWEGHRMYESDFSVLNTLMRAFMKSEMHFEALEILS
Subjt:  FECRETAFAFFKLAFKDDSEETVKSCCVLAHLLAAEQLRFLAQDIVSWVVARIGPGRSKNLAAFMWEGHRMYESDFSVLNTLMRAFMKSEMHFEALEILS

Query:  KMREVGVTPNPSAISILFRLLIRAGDCGAVWKLFGDVVRKGPCPNNFIFNLLILEFCRKGWTRIGEALLHVMGKFRCEPDVYSYNIVIHANCLKGQSSYA
        KMREVGVTPNPSAISILFRLLIRAGDCGAVWKLFGDVVRKGPCPNNFIFNLLILEFCRKGWTRIGEALLHVMGKFRCEPDVYSYNIVIHANCLKGQSSYA
Subjt:  KMREVGVTPNPSAISILFRLLIRAGDCGAVWKLFGDVVRKGPCPNNFIFNLLILEFCRKGWTRIGEALLHVMGKFRCEPDVYSYNIVIHANCLKGQSSYA

Query:  LHLVNLMIANDCKPSIATFCTIIDAFCKE
        LHLVNLMIANDCKPSIATFCTIIDAFCKE
Subjt:  LHLVNLMIANDCKPSIATFCTIIDAFCKE

XP_016899019.1 PREDICTED: pentatricopeptide repeat-containing protein At1g63130, mitochondrial-like [Cucumis melo]1.4e-192100Show/hide
Query:  MFVNVRRLQNSFKVHWSSSLSSSQTLIPKFFNEYYYSSDSSTRSFDYIAQFLPSNDGTLKLISVNSVTTNDRRRVSVGLSKAVKLPQGYVLKGLSRNFCP
        MFVNVRRLQNSFKVHWSSSLSSSQTLIPKFFNEYYYSSDSSTRSFDYIAQFLPSNDGTLKLISVNSVTTNDRRRVSVGLSKAVKLPQGYVLKGLSRNFCP
Subjt:  MFVNVRRLQNSFKVHWSSSLSSSQTLIPKFFNEYYYSSDSSTRSFDYIAQFLPSNDGTLKLISVNSVTTNDRRRVSVGLSKAVKLPQGYVLKGLSRNFCP

Query:  FLLVKIMKLFECRETAFAFFKLAFKDDSEETVKSCCVLAHLLAAEQLRFLAQDIVSWVVARIGPGRSKNLAAFMWEGHRMYESDFSVLNTLMRAFMKSEM
        FLLVKIMKLFECRETAFAFFKLAFKDDSEETVKSCCVLAHLLAAEQLRFLAQDIVSWVVARIGPGRSKNLAAFMWEGHRMYESDFSVLNTLMRAFMKSEM
Subjt:  FLLVKIMKLFECRETAFAFFKLAFKDDSEETVKSCCVLAHLLAAEQLRFLAQDIVSWVVARIGPGRSKNLAAFMWEGHRMYESDFSVLNTLMRAFMKSEM

Query:  HFEALEILSKMREVGVTPNPSAISILFRLLIRAGDCGAVWKLFGDVVRKGPCPNNFIFNLLILEFCRKGWTRIGEALLHVMGKFRCEPDVYSYNIVIHAN
        HFEALEILSKMREVGVTPNPSAISILFRLLIRAGDCGAVWKLFGDVVRKGPCPNNFIFNLLILEFCRKGWTRIGEALLHVMGKFRCEPDVYSYNIVIHAN
Subjt:  HFEALEILSKMREVGVTPNPSAISILFRLLIRAGDCGAVWKLFGDVVRKGPCPNNFIFNLLILEFCRKGWTRIGEALLHVMGKFRCEPDVYSYNIVIHAN

Query:  CLKGQSSYALHLVNLMIANDCKPSIATFCTIIDAFCKE
        CLKGQSSYALHLVNLMIANDCKPSIATFCTIIDAFCKE
Subjt:  CLKGQSSYALHLVNLMIANDCKPSIATFCTIIDAFCKE

XP_031738963.1 pentatricopeptide repeat-containing protein At1g09900 [Cucumis sativus]5.5e-18194.41Show/hide
Query:  MFVNVRRLQNSFKVHWSSSLSSSQTLIPKFFNEY--YYSSDSSTRSFDYIAQFLPSNDGTLKLISVNSVTTNDRRRVSVGLSKAVKLPQGYVLKGLSRNF
        MFVNVRRLQNSFKVHWSSSLSSSQTLIPK FNEY    SSDSSTRSFDYIAQFLPSNDGTLKLISVNSVTTNDRRRV+VGLSKA+KL QGYVLKGLSRNF
Subjt:  MFVNVRRLQNSFKVHWSSSLSSSQTLIPKFFNEY--YYSSDSSTRSFDYIAQFLPSNDGTLKLISVNSVTTNDRRRVSVGLSKAVKLPQGYVLKGLSRNF

Query:  CPFLLVKIMKLFECRETAFAFFKLAFKDDSEETVKSCCVLAHLLAAEQLRFLAQDIVSWVVARIGPGRSKNLAAFMWEGHRMYESDFSVLNTLMRAFMKS
        CPFLLVKIMKLFECRETA+AFFKLAFKDDSEETV+SCCVLAHLLAAEQLRFLAQDIVSWVVARIGPGRSKNLAAFMWEGHR+YESD+SVL+TLMRAF+KS
Subjt:  CPFLLVKIMKLFECRETAFAFFKLAFKDDSEETVKSCCVLAHLLAAEQLRFLAQDIVSWVVARIGPGRSKNLAAFMWEGHRMYESDFSVLNTLMRAFMKS

Query:  EMHFEALEILSKMREVGVTPNPSAISILFRLLIRAGDCGAVWKLFGDVVRKGPCPNNFIFNLLILEFCRKGWTRIGEALLHVMGKFRCEPDVYSYNIVIH
        EMHFEALEILSKMREVGVTPNPSAISILFRLLIRAGDCGAVWKLFGDVVRKGPCPNNF FNLLILEFCRKGWTRIGEALLHVMGKFRCEPDVYSYNIVI+
Subjt:  EMHFEALEILSKMREVGVTPNPSAISILFRLLIRAGDCGAVWKLFGDVVRKGPCPNNFIFNLLILEFCRKGWTRIGEALLHVMGKFRCEPDVYSYNIVIH

Query:  ANCLKGQSSYALHLVNLMIANDCKPSIATFCTIIDAFCKE
        ANCLKGQSSYALHL+NLMI N CKPSIATFCTIIDAFCKE
Subjt:  ANCLKGQSSYALHLVNLMIANDCKPSIATFCTIIDAFCKE

XP_038892548.1 pentatricopeptide repeat-containing protein At1g63330-like [Benincasa hispida]1.2e-16487.06Show/hide
Query:  MFVNVRRLQNSFKVHWSSSLSSSQTLIPKFFNEY--YYSSDSSTRSFDYIAQFLPSNDGTLKLISVNSVTTNDRRRVSVGLSKAVKLPQGYVLKGLSRNF
        M VNVRRLQNSFKVHWSSSLS SQTLI KF NEY    SSDS T +FDYIAQFLPSNDGTLKLISVNSV TNDRRRV+VGLSKA+KL QGY LKGLSRNF
Subjt:  MFVNVRRLQNSFKVHWSSSLSSSQTLIPKFFNEY--YYSSDSSTRSFDYIAQFLPSNDGTLKLISVNSVTTNDRRRVSVGLSKAVKLPQGYVLKGLSRNF

Query:  CPFLLVKIMKLFECRETAFAFFKLAFKDDSEETVKSCCVLAHLLAAEQLRFLAQDIVSWVVARIGPGRSKNLAAFMWEGHRMYESDFSVLNTLMRAFMKS
        CPFLLV+IMKLFECRETAFAFFKLAFKDDSEETV+SCC++AHLLAAE+LRFLAQDI+SWVVARIGPGRSKNLAAFMW+GH  YESD SVL+TLMRAFMKS
Subjt:  CPFLLVKIMKLFECRETAFAFFKLAFKDDSEETVKSCCVLAHLLAAEQLRFLAQDIVSWVVARIGPGRSKNLAAFMWEGHRMYESDFSVLNTLMRAFMKS

Query:  EMHFEALEILSKMREVGVTPNPSAISILFRLLIRAGDCGAVWKLFGDVVRKGPCPNNFIFNLLILEFCRKGWTRIGEALLHVMGKFRCEPDVYSYNIVIH
        EMHFEALEILSKMREVGVTPN SAISILFRLL+RAGD GAVWKLFGD+VRKGP PNN++FN++ILEFCRKGWTRIGE LLHVM KFRCEPDVYSYNIVI+
Subjt:  EMHFEALEILSKMREVGVTPNPSAISILFRLLIRAGDCGAVWKLFGDVVRKGPCPNNFIFNLLILEFCRKGWTRIGEALLHVMGKFRCEPDVYSYNIVIH

Query:  ANCLKGQSSYALHLVNLMIANDCKPSIATFCTIIDAFCKE
        ANCLKG+SS ALHLVNLMIAN CKPSIAT  TIIDAFCKE
Subjt:  ANCLKGQSSYALHLVNLMIANDCKPSIATFCTIIDAFCKE

TrEMBL top hitse value%identityAlignment
A0A0A0L7U2 Uncharacterized protein2.7e-18194.41Show/hide
Query:  MFVNVRRLQNSFKVHWSSSLSSSQTLIPKFFNEY--YYSSDSSTRSFDYIAQFLPSNDGTLKLISVNSVTTNDRRRVSVGLSKAVKLPQGYVLKGLSRNF
        MFVNVRRLQNSFKVHWSSSLSSSQTLIPK FNEY    SSDSSTRSFDYIAQFLPSNDGTLKLISVNSVTTNDRRRV+VGLSKA+KL QGYVLKGLSRNF
Subjt:  MFVNVRRLQNSFKVHWSSSLSSSQTLIPKFFNEY--YYSSDSSTRSFDYIAQFLPSNDGTLKLISVNSVTTNDRRRVSVGLSKAVKLPQGYVLKGLSRNF

Query:  CPFLLVKIMKLFECRETAFAFFKLAFKDDSEETVKSCCVLAHLLAAEQLRFLAQDIVSWVVARIGPGRSKNLAAFMWEGHRMYESDFSVLNTLMRAFMKS
        CPFLLVKIMKLFECRETA+AFFKLAFKDDSEETV+SCCVLAHLLAAEQLRFLAQDIVSWVVARIGPGRSKNLAAFMWEGHR+YESD+SVL+TLMRAF+KS
Subjt:  CPFLLVKIMKLFECRETAFAFFKLAFKDDSEETVKSCCVLAHLLAAEQLRFLAQDIVSWVVARIGPGRSKNLAAFMWEGHRMYESDFSVLNTLMRAFMKS

Query:  EMHFEALEILSKMREVGVTPNPSAISILFRLLIRAGDCGAVWKLFGDVVRKGPCPNNFIFNLLILEFCRKGWTRIGEALLHVMGKFRCEPDVYSYNIVIH
        EMHFEALEILSKMREVGVTPNPSAISILFRLLIRAGDCGAVWKLFGDVVRKGPCPNNF FNLLILEFCRKGWTRIGEALLHVMGKFRCEPDVYSYNIVI+
Subjt:  EMHFEALEILSKMREVGVTPNPSAISILFRLLIRAGDCGAVWKLFGDVVRKGPCPNNFIFNLLILEFCRKGWTRIGEALLHVMGKFRCEPDVYSYNIVIH

Query:  ANCLKGQSSYALHLVNLMIANDCKPSIATFCTIIDAFCKE
        ANCLKGQSSYALHL+NLMI N CKPSIATFCTIIDAFCKE
Subjt:  ANCLKGQSSYALHLVNLMIANDCKPSIATFCTIIDAFCKE

A0A1S4DSR0 pentatricopeptide repeat-containing protein At1g63130, mitochondrial-like6.8e-193100Show/hide
Query:  MFVNVRRLQNSFKVHWSSSLSSSQTLIPKFFNEYYYSSDSSTRSFDYIAQFLPSNDGTLKLISVNSVTTNDRRRVSVGLSKAVKLPQGYVLKGLSRNFCP
        MFVNVRRLQNSFKVHWSSSLSSSQTLIPKFFNEYYYSSDSSTRSFDYIAQFLPSNDGTLKLISVNSVTTNDRRRVSVGLSKAVKLPQGYVLKGLSRNFCP
Subjt:  MFVNVRRLQNSFKVHWSSSLSSSQTLIPKFFNEYYYSSDSSTRSFDYIAQFLPSNDGTLKLISVNSVTTNDRRRVSVGLSKAVKLPQGYVLKGLSRNFCP

Query:  FLLVKIMKLFECRETAFAFFKLAFKDDSEETVKSCCVLAHLLAAEQLRFLAQDIVSWVVARIGPGRSKNLAAFMWEGHRMYESDFSVLNTLMRAFMKSEM
        FLLVKIMKLFECRETAFAFFKLAFKDDSEETVKSCCVLAHLLAAEQLRFLAQDIVSWVVARIGPGRSKNLAAFMWEGHRMYESDFSVLNTLMRAFMKSEM
Subjt:  FLLVKIMKLFECRETAFAFFKLAFKDDSEETVKSCCVLAHLLAAEQLRFLAQDIVSWVVARIGPGRSKNLAAFMWEGHRMYESDFSVLNTLMRAFMKSEM

Query:  HFEALEILSKMREVGVTPNPSAISILFRLLIRAGDCGAVWKLFGDVVRKGPCPNNFIFNLLILEFCRKGWTRIGEALLHVMGKFRCEPDVYSYNIVIHAN
        HFEALEILSKMREVGVTPNPSAISILFRLLIRAGDCGAVWKLFGDVVRKGPCPNNFIFNLLILEFCRKGWTRIGEALLHVMGKFRCEPDVYSYNIVIHAN
Subjt:  HFEALEILSKMREVGVTPNPSAISILFRLLIRAGDCGAVWKLFGDVVRKGPCPNNFIFNLLILEFCRKGWTRIGEALLHVMGKFRCEPDVYSYNIVIHAN

Query:  CLKGQSSYALHLVNLMIANDCKPSIATFCTIIDAFCKE
        CLKGQSSYALHLVNLMIANDCKPSIATFCTIIDAFCKE
Subjt:  CLKGQSSYALHLVNLMIANDCKPSIATFCTIIDAFCKE

A0A5A7U1D1 Pentatricopeptide repeat-containing protein6.8e-193100Show/hide
Query:  MFVNVRRLQNSFKVHWSSSLSSSQTLIPKFFNEYYYSSDSSTRSFDYIAQFLPSNDGTLKLISVNSVTTNDRRRVSVGLSKAVKLPQGYVLKGLSRNFCP
        MFVNVRRLQNSFKVHWSSSLSSSQTLIPKFFNEYYYSSDSSTRSFDYIAQFLPSNDGTLKLISVNSVTTNDRRRVSVGLSKAVKLPQGYVLKGLSRNFCP
Subjt:  MFVNVRRLQNSFKVHWSSSLSSSQTLIPKFFNEYYYSSDSSTRSFDYIAQFLPSNDGTLKLISVNSVTTNDRRRVSVGLSKAVKLPQGYVLKGLSRNFCP

Query:  FLLVKIMKLFECRETAFAFFKLAFKDDSEETVKSCCVLAHLLAAEQLRFLAQDIVSWVVARIGPGRSKNLAAFMWEGHRMYESDFSVLNTLMRAFMKSEM
        FLLVKIMKLFECRETAFAFFKLAFKDDSEETVKSCCVLAHLLAAEQLRFLAQDIVSWVVARIGPGRSKNLAAFMWEGHRMYESDFSVLNTLMRAFMKSEM
Subjt:  FLLVKIMKLFECRETAFAFFKLAFKDDSEETVKSCCVLAHLLAAEQLRFLAQDIVSWVVARIGPGRSKNLAAFMWEGHRMYESDFSVLNTLMRAFMKSEM

Query:  HFEALEILSKMREVGVTPNPSAISILFRLLIRAGDCGAVWKLFGDVVRKGPCPNNFIFNLLILEFCRKGWTRIGEALLHVMGKFRCEPDVYSYNIVIHAN
        HFEALEILSKMREVGVTPNPSAISILFRLLIRAGDCGAVWKLFGDVVRKGPCPNNFIFNLLILEFCRKGWTRIGEALLHVMGKFRCEPDVYSYNIVIHAN
Subjt:  HFEALEILSKMREVGVTPNPSAISILFRLLIRAGDCGAVWKLFGDVVRKGPCPNNFIFNLLILEFCRKGWTRIGEALLHVMGKFRCEPDVYSYNIVIHAN

Query:  CLKGQSSYALHLVNLMIANDCKPSIATFCTIIDAFCKE
        CLKGQSSYALHLVNLMIANDCKPSIATFCTIIDAFCKE
Subjt:  CLKGQSSYALHLVNLMIANDCKPSIATFCTIIDAFCKE

A0A5D3D1G3 Pentatricopeptide repeat-containing protein6.6e-188100Show/hide
Query:  NSFKVHWSSSLSSSQTLIPKFFNEYYYSSDSSTRSFDYIAQFLPSNDGTLKLISVNSVTTNDRRRVSVGLSKAVKLPQGYVLKGLSRNFCPFLLVKIMKL
        NSFKVHWSSSLSSSQTLIPKFFNEYYYSSDSSTRSFDYIAQFLPSNDGTLKLISVNSVTTNDRRRVSVGLSKAVKLPQGYVLKGLSRNFCPFLLVKIMKL
Subjt:  NSFKVHWSSSLSSSQTLIPKFFNEYYYSSDSSTRSFDYIAQFLPSNDGTLKLISVNSVTTNDRRRVSVGLSKAVKLPQGYVLKGLSRNFCPFLLVKIMKL

Query:  FECRETAFAFFKLAFKDDSEETVKSCCVLAHLLAAEQLRFLAQDIVSWVVARIGPGRSKNLAAFMWEGHRMYESDFSVLNTLMRAFMKSEMHFEALEILS
        FECRETAFAFFKLAFKDDSEETVKSCCVLAHLLAAEQLRFLAQDIVSWVVARIGPGRSKNLAAFMWEGHRMYESDFSVLNTLMRAFMKSEMHFEALEILS
Subjt:  FECRETAFAFFKLAFKDDSEETVKSCCVLAHLLAAEQLRFLAQDIVSWVVARIGPGRSKNLAAFMWEGHRMYESDFSVLNTLMRAFMKSEMHFEALEILS

Query:  KMREVGVTPNPSAISILFRLLIRAGDCGAVWKLFGDVVRKGPCPNNFIFNLLILEFCRKGWTRIGEALLHVMGKFRCEPDVYSYNIVIHANCLKGQSSYA
        KMREVGVTPNPSAISILFRLLIRAGDCGAVWKLFGDVVRKGPCPNNFIFNLLILEFCRKGWTRIGEALLHVMGKFRCEPDVYSYNIVIHANCLKGQSSYA
Subjt:  KMREVGVTPNPSAISILFRLLIRAGDCGAVWKLFGDVVRKGPCPNNFIFNLLILEFCRKGWTRIGEALLHVMGKFRCEPDVYSYNIVIHANCLKGQSSYA

Query:  LHLVNLMIANDCKPSIATFCTIIDAFCKE
        LHLVNLMIANDCKPSIATFCTIIDAFCKE
Subjt:  LHLVNLMIANDCKPSIATFCTIIDAFCKE

A0A6J1IVM8 pentatricopeptide repeat-containing protein At1g09900-like1.9e-15582.35Show/hide
Query:  MFVNVRRLQNSFKVHWSSSLSSSQTLIPKFFNEY--YYSSDSSTRSFDYIAQFLPSNDGTLKLISVNSVTTNDRRRVSVGLSKAVKLPQGYVLKGLSRNF
        MFV VR LQNSFKVHWSSSLS  QTL PKF N+Y    SSDSST +FDYIAQFLPSNDGTLKL+SV+SVTTNDRRR++VGLSKA+KL QGY LK LSRNF
Subjt:  MFVNVRRLQNSFKVHWSSSLSSSQTLIPKFFNEY--YYSSDSSTRSFDYIAQFLPSNDGTLKLISVNSVTTNDRRRVSVGLSKAVKLPQGYVLKGLSRNF

Query:  CPFLLVKIMKLFECRETAFAFFKLAFKDDSEETVKSCCVLAHLLAAEQLRFLAQDIVSWVVARIGPGRSKNLAAFMWEGHRMYESDFSVLNTLMRAFMKS
        CPF LVKIMKLFECRETAFAFFKLAF DD E+TV+SCCV+AHLLAAE+   LAQDIVSW+ ARIGP RSKNLAAFMWEGH  YESD SVLNTLMR FMKS
Subjt:  CPFLLVKIMKLFECRETAFAFFKLAFKDDSEETVKSCCVLAHLLAAEQLRFLAQDIVSWVVARIGPGRSKNLAAFMWEGHRMYESDFSVLNTLMRAFMKS

Query:  EMHFEALEILSKMREVGVTPNPSAISILFRLLIRAGDCGAVWKLFGDVVRKGPCPNNFIFNLLILEFCRKGWTRIGEALLHVMGKFRCEPDVYSYNIVIH
        EMH+EALEILSKMREVGV PN SAISILFRLL+RAGD GAVWKLFGDVVRKGPCPNN++FN++ILEFCRKGW+ IGE LLHVM KFRCEPDVYSYNIVI+
Subjt:  EMHFEALEILSKMREVGVTPNPSAISILFRLLIRAGDCGAVWKLFGDVVRKGPCPNNFIFNLLILEFCRKGWTRIGEALLHVMGKFRCEPDVYSYNIVIH

Query:  ANCLKGQSSYALHLVNLMIANDCKPSIATFCTIIDAFCKE
        A CL+GQSS ALH VNLMIAN CKPSIATF  +IDAFCKE
Subjt:  ANCLKGQSSYALHLVNLMIANDCKPSIATFCTIIDAFCKE

SwissProt top hitse value%identityAlignment
P0C894 Putative pentatricopeptide repeat-containing protein At2g021508.1e-1824.63Show/hide
Query:  IMKLFECRETAFAFFKLAF-KDDSEETVKSCCVLAHLLAAEQLRFLAQDIVSWVVARIGPGRSKNLAAFMWEGHRMYESDFSVLNTLMRAFMKSEMHFEA
        +++L E  + AF FFK +  ++  + +V+S C++AH+L   ++ + A  ++  +V         ++   +W    +    F V + L    +   M  EA
Subjt:  IMKLFECRETAFAFFKLAF-KDDSEETVKSCCVLAHLLAAEQLRFLAQDIVSWVVARIGPGRSKNLAAFMWEGHRMYESDFSVLNTLMRAFMKSEMHFEA

Query:  LEILSKMREVGVTPNPSAISILFRLLIRAGDCGAVWKLFGDVVRKGPCPNNFIFNLLILEFCRKGWTRIGEALLHVMGKFR-------------------
        ++  SKM+   V P   + + L     + G    V + F D++  G  P  F +N++I   C++G       L   M KFR                   
Subjt:  LEILSKMREVGVTPNPSAISILFRLLIRAGDCGAVWKLFGDVVRKGPCPNNFIFNLLILEFCRKGWTRIGEALLHVMGKFR-------------------

Query:  -----------------CEPDVYSYNIVIHANCLKGQSSYALHLVNLMIANDCKPSIATFCTIIDAFCKEDM
                         CEPDV +YN +I+  C  G+    L     M  N  KP++ ++ T++DAFCKE M
Subjt:  -----------------CEPDVYSYNIVIHANCLKGQSSYALHLVNLMIANDCKPSIATFCTIIDAFCKEDM

Q3EDF8 Pentatricopeptide repeat-containing protein At1g099005.8e-1630.97Show/hide
Query:  DFSVLNTLMRAFMKSEMHFEALEILSKMREVGVTPNPSAISILFRLLIRAGDCGAVWKLFGDVVRKGPCPNNFIFNLLILEFCRKGWTRIGEALLHVMGK
        D    N L+    K     EA++ L+ M   G  PN    +I+ R +   G      KL  D++RKG  P+   FN+LI   CRKG       +L  M +
Subjt:  DFSVLNTLMRAFMKSEMHFEALEILSKMREVGVTPNPSAISILFRLLIRAGDCGAVWKLFGDVVRKGPCPNNFIFNLLILEFCRKGWTRIGEALLHVMGK

Query:  FRCEPDVYSYNIVIHANCLKGQSSYALHLVNLMIANDCKPSIATFCTIIDAFCKE
          C+P+  SYN ++H  C + +   A+  +  M++  C P I T+ T++ A CK+
Subjt:  FRCEPDVYSYNIVIHANCLKGQSSYALHLVNLMIANDCKPSIATFCTIIDAFCKE

Q9LQ16 Pentatricopeptide repeat-containing protein At1g629101.0e-1529.49Show/hide
Query:  ESDFSVLNTLMRAFMKSEMHFEALEILSKMREVGVTPNPSAISILFRLLIRAGDCGAVWKLFGDVVRKGPCPNNFIFNLLILEFCRKGWTRIGEALLHVM
        E+D  + NT++    K +   +AL + ++M   G+ P+    S L   L   G      +L  D++ +   PN   F+ LI  F ++G     E L   M
Subjt:  ESDFSVLNTLMRAFMKSEMHFEALEILSKMREVGVTPNPSAISILFRLLIRAGDCGAVWKLFGDVVRKGPCPNNFIFNLLILEFCRKGWTRIGEALLHVM

Query:  GKFRCEPDVYSYNIVIHANCLKGQSSYALHLVNLMIANDCKPSIATFCTIIDAFCK
         K   +PD+++Y+ +I+  C+  +   A H+  LMI+ DC P++ T+ T+I  FCK
Subjt:  GKFRCEPDVYSYNIVIHANCLKGQSSYALHLVNLMIANDCKPSIATFCTIIDAFCK

Q9LVQ5 Pentatricopeptide repeat-containing protein At5g558404.5e-1624.23Show/hide
Query:  AFAFFKLAFKDDSEET---VKSCCVLAHLLAAEQLRFLAQDIVSWVVARIGPGRSKNLAAFMWEGHRMYESDFSVLNTLMRAFMKSEMHFEALEILSKMR
        A  F K   K    ET   V+  C+  H+L   ++   A+ I+  +   +  G+S  +   +   +R+  S+ SV + L+R +++  M  ++LEI   M 
Subjt:  AFAFFKLAFKDDSEET---VKSCCVLAHLLAAEQLRFLAQDIVSWVVARIGPGRSKNLAAFMWEGHRMYESDFSVLNTLMRAFMKSEMHFEALEILSKMR

Query:  EVGVTPNPSAISILFRLLIRAGDCGAVWKLFGDVVRKGPCPNNFIFNLLILEFCRKGWTRIGEALLHVMGKFRCEPDVYSYNIVIHANCLKGQSSYALHL
          G  P+    + +   ++++G+  +VW    +++++  CP+   FN+LI   C +G       L+  M K    P + +YN V+H  C KG+   A+ L
Subjt:  EVGVTPNPSAISILFRLLIRAGDCGAVWKLFGDVVRKGPCPNNFIFNLLILEFCRKGWTRIGEALLHVMGKFRCEPDVYSYNIVIHANCLKGQSSYALHL

Query:  VNLMIANDCKPSIATFCTIIDAFCKED
        ++ M +      + T+  +I   C+ +
Subjt:  VNLMIANDCKPSIATFCTIIDAFCKED

Q9SXD1 Pentatricopeptide repeat-containing protein At1g62670, mitochondrial1.0e-1527.33Show/hide
Query:  SKNLAAFMWEGHRMYESDFSVLNTLMRAFMKSEMHFEALEILSKMREVGVTPNPSAISILFRLLIRAGDCGAVWKLFGDVVRKGPCPNNFIFNLLILEFC
        +K +  FM   H     D    NTL++ F K +   E +E+  +M + G+  N    +IL + L +AGDC    ++F ++V  G  PN   +N L+   C
Subjt:  SKNLAAFMWEGHRMYESDFSVLNTLMRAFMKSEMHFEALEILSKMREVGVTPNPSAISILFRLLIRAGDCGAVWKLFGDVVRKGPCPNNFIFNLLILEFC

Query:  RKGWTRIGEALLHVMGKFRCEPDVYSYNIVIHANCLKGQSSYALHLVNLMIANDCKPSIATFCTIIDAFCKE
        + G       +   + + + EP +Y+YNI+I   C  G+      L   +     KP +  + T+I  FC++
Subjt:  RKGWTRIGEALLHVMGKFRCEPDVYSYNIVIHANCLKGQSSYALHLVNLMIANDCKPSIATFCTIIDAFCKE

Arabidopsis top hitse value%identityAlignment
AT1G09900.1 Pentatricopeptide repeat (PPR-like) superfamily protein4.1e-1730.97Show/hide
Query:  DFSVLNTLMRAFMKSEMHFEALEILSKMREVGVTPNPSAISILFRLLIRAGDCGAVWKLFGDVVRKGPCPNNFIFNLLILEFCRKGWTRIGEALLHVMGK
        D    N L+    K     EA++ L+ M   G  PN    +I+ R +   G      KL  D++RKG  P+   FN+LI   CRKG       +L  M +
Subjt:  DFSVLNTLMRAFMKSEMHFEALEILSKMREVGVTPNPSAISILFRLLIRAGDCGAVWKLFGDVVRKGPCPNNFIFNLLILEFCRKGWTRIGEALLHVMGK

Query:  FRCEPDVYSYNIVIHANCLKGQSSYALHLVNLMIANDCKPSIATFCTIIDAFCKE
          C+P+  SYN ++H  C + +   A+  +  M++  C P I T+ T++ A CK+
Subjt:  FRCEPDVYSYNIVIHANCLKGQSSYALHLVNLMIANDCKPSIATFCTIIDAFCKE

AT1G62670.1 rna processing factor 27.1e-1727.33Show/hide
Query:  SKNLAAFMWEGHRMYESDFSVLNTLMRAFMKSEMHFEALEILSKMREVGVTPNPSAISILFRLLIRAGDCGAVWKLFGDVVRKGPCPNNFIFNLLILEFC
        +K +  FM   H     D    NTL++ F K +   E +E+  +M + G+  N    +IL + L +AGDC    ++F ++V  G  PN   +N L+   C
Subjt:  SKNLAAFMWEGHRMYESDFSVLNTLMRAFMKSEMHFEALEILSKMREVGVTPNPSAISILFRLLIRAGDCGAVWKLFGDVVRKGPCPNNFIFNLLILEFC

Query:  RKGWTRIGEALLHVMGKFRCEPDVYSYNIVIHANCLKGQSSYALHLVNLMIANDCKPSIATFCTIIDAFCKE
        + G       +   + + + EP +Y+YNI+I   C  G+      L   +     KP +  + T+I  FC++
Subjt:  RKGWTRIGEALLHVMGKFRCEPDVYSYNIVIHANCLKGQSSYALHLVNLMIANDCKPSIATFCTIIDAFCKE

AT1G62910.1 Pentatricopeptide repeat (PPR) superfamily protein7.1e-1729.49Show/hide
Query:  ESDFSVLNTLMRAFMKSEMHFEALEILSKMREVGVTPNPSAISILFRLLIRAGDCGAVWKLFGDVVRKGPCPNNFIFNLLILEFCRKGWTRIGEALLHVM
        E+D  + NT++    K +   +AL + ++M   G+ P+    S L   L   G      +L  D++ +   PN   F+ LI  F ++G     E L   M
Subjt:  ESDFSVLNTLMRAFMKSEMHFEALEILSKMREVGVTPNPSAISILFRLLIRAGDCGAVWKLFGDVVRKGPCPNNFIFNLLILEFCRKGWTRIGEALLHVM

Query:  GKFRCEPDVYSYNIVIHANCLKGQSSYALHLVNLMIANDCKPSIATFCTIIDAFCK
         K   +PD+++Y+ +I+  C+  +   A H+  LMI+ DC P++ T+ T+I  FCK
Subjt:  GKFRCEPDVYSYNIVIHANCLKGQSSYALHLVNLMIANDCKPSIATFCTIIDAFCK

AT2G02150.1 Tetratricopeptide repeat (TPR)-like superfamily protein5.8e-1924.63Show/hide
Query:  IMKLFECRETAFAFFKLAF-KDDSEETVKSCCVLAHLLAAEQLRFLAQDIVSWVVARIGPGRSKNLAAFMWEGHRMYESDFSVLNTLMRAFMKSEMHFEA
        +++L E  + AF FFK +  ++  + +V+S C++AH+L   ++ + A  ++  +V         ++   +W    +    F V + L    +   M  EA
Subjt:  IMKLFECRETAFAFFKLAF-KDDSEETVKSCCVLAHLLAAEQLRFLAQDIVSWVVARIGPGRSKNLAAFMWEGHRMYESDFSVLNTLMRAFMKSEMHFEA

Query:  LEILSKMREVGVTPNPSAISILFRLLIRAGDCGAVWKLFGDVVRKGPCPNNFIFNLLILEFCRKGWTRIGEALLHVMGKFR-------------------
        ++  SKM+   V P   + + L     + G    V + F D++  G  P  F +N++I   C++G       L   M KFR                   
Subjt:  LEILSKMREVGVTPNPSAISILFRLLIRAGDCGAVWKLFGDVVRKGPCPNNFIFNLLILEFCRKGWTRIGEALLHVMGKFR-------------------

Query:  -----------------CEPDVYSYNIVIHANCLKGQSSYALHLVNLMIANDCKPSIATFCTIIDAFCKEDM
                         CEPDV +YN +I+  C  G+    L     M  N  KP++ ++ T++DAFCKE M
Subjt:  -----------------CEPDVYSYNIVIHANCLKGQSSYALHLVNLMIANDCKPSIATFCTIIDAFCKEDM

AT5G55840.1 Pentatricopeptide repeat (PPR) superfamily protein3.2e-1724.23Show/hide
Query:  AFAFFKLAFKDDSEET---VKSCCVLAHLLAAEQLRFLAQDIVSWVVARIGPGRSKNLAAFMWEGHRMYESDFSVLNTLMRAFMKSEMHFEALEILSKMR
        A  F K   K    ET   V+  C+  H+L   ++   A+ I+  +   +  G+S  +   +   +R+  S+ SV + L+R +++  M  ++LEI   M 
Subjt:  AFAFFKLAFKDDSEET---VKSCCVLAHLLAAEQLRFLAQDIVSWVVARIGPGRSKNLAAFMWEGHRMYESDFSVLNTLMRAFMKSEMHFEALEILSKMR

Query:  EVGVTPNPSAISILFRLLIRAGDCGAVWKLFGDVVRKGPCPNNFIFNLLILEFCRKGWTRIGEALLHVMGKFRCEPDVYSYNIVIHANCLKGQSSYALHL
          G  P+    + +   ++++G+  +VW    +++++  CP+   FN+LI   C +G       L+  M K    P + +YN V+H  C KG+   A+ L
Subjt:  EVGVTPNPSAISILFRLLIRAGDCGAVWKLFGDVVRKGPCPNNFIFNLLILEFCRKGWTRIGEALLHVMGKFRCEPDVYSYNIVIHANCLKGQSSYALHL

Query:  VNLMIANDCKPSIATFCTIIDAFCKED
        ++ M +      + T+  +I   C+ +
Subjt:  VNLMIANDCKPSIATFCTIIDAFCKED


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTTTGTCAATGTGCGTCGCCTGCAGAACTCTTTTAAGGTACACTGGTCTTCTTCTCTGAGTTCATCTCAAACCCTAATTCCGAAATTCTTTAACGAGTATTATTATTC
GTCTGATTCGAGTACTCGTTCTTTTGATTATATTGCTCAATTTTTGCCTTCAAACGATGGTACTTTGAAATTGATCTCTGTGAATTCCGTGACTACAAATGACCGCCGTA
GAGTCAGTGTTGGGTTATCCAAAGCGGTTAAGCTGCCTCAGGGATACGTATTGAAGGGATTATCGAGAAATTTCTGTCCATTTTTACTGGTCAAGATTATGAAACTGTTT
GAATGTCGGGAAACCGCGTTTGCGTTCTTCAAGCTAGCATTTAAGGACGATTCTGAAGAAACTGTTAAGTCTTGTTGTGTGCTGGCACATCTCTTAGCTGCAGAACAACT
TCGTTTTCTAGCGCAAGATATTGTTTCGTGGGTTGTTGCTAGAATTGGTCCAGGAAGGAGCAAGAATTTGGCGGCATTTATGTGGGAAGGTCACCGTATGTACGAATCTG
ATTTTTCAGTGTTGAACACTCTAATGCGGGCGTTTATGAAGTCAGAAATGCATTTTGAGGCTTTAGAAATATTGAGTAAGATGCGGGAGGTGGGAGTGACGCCAAATCCA
TCGGCCATTTCGATTCTTTTTAGATTGCTGATTAGAGCTGGCGATTGTGGTGCTGTATGGAAGTTGTTTGGAGATGTGGTTCGAAAGGGACCTTGCCCTAATAATTTTAT
ATTTAACTTATTGATTCTTGAGTTTTGTAGAAAAGGTTGGACTAGGATTGGAGAAGCTCTGTTGCACGTAATGGGCAAATTTAGATGTGAACCAGATGTTTATTCCTATA
ATATCGTGATACATGCGAACTGCTTAAAAGGGCAATCATCATATGCACTTCATTTGGTGAATCTAATGATCGCAAATGACTGTAAACCTAGCATTGCCACATTCTGTACC
ATCATTGATGCCTTCTGCAAGGAGGATATGGAAAGGAGGAGGATGGGGATCGATTATTAA
mRNA sequenceShow/hide mRNA sequence
ATGTTTGTCAATGTGCGTCGCCTGCAGAACTCTTTTAAGGTACACTGGTCTTCTTCTCTGAGTTCATCTCAAACCCTAATTCCGAAATTCTTTAACGAGTATTATTATTC
GTCTGATTCGAGTACTCGTTCTTTTGATTATATTGCTCAATTTTTGCCTTCAAACGATGGTACTTTGAAATTGATCTCTGTGAATTCCGTGACTACAAATGACCGCCGTA
GAGTCAGTGTTGGGTTATCCAAAGCGGTTAAGCTGCCTCAGGGATACGTATTGAAGGGATTATCGAGAAATTTCTGTCCATTTTTACTGGTCAAGATTATGAAACTGTTT
GAATGTCGGGAAACCGCGTTTGCGTTCTTCAAGCTAGCATTTAAGGACGATTCTGAAGAAACTGTTAAGTCTTGTTGTGTGCTGGCACATCTCTTAGCTGCAGAACAACT
TCGTTTTCTAGCGCAAGATATTGTTTCGTGGGTTGTTGCTAGAATTGGTCCAGGAAGGAGCAAGAATTTGGCGGCATTTATGTGGGAAGGTCACCGTATGTACGAATCTG
ATTTTTCAGTGTTGAACACTCTAATGCGGGCGTTTATGAAGTCAGAAATGCATTTTGAGGCTTTAGAAATATTGAGTAAGATGCGGGAGGTGGGAGTGACGCCAAATCCA
TCGGCCATTTCGATTCTTTTTAGATTGCTGATTAGAGCTGGCGATTGTGGTGCTGTATGGAAGTTGTTTGGAGATGTGGTTCGAAAGGGACCTTGCCCTAATAATTTTAT
ATTTAACTTATTGATTCTTGAGTTTTGTAGAAAAGGTTGGACTAGGATTGGAGAAGCTCTGTTGCACGTAATGGGCAAATTTAGATGTGAACCAGATGTTTATTCCTATA
ATATCGTGATACATGCGAACTGCTTAAAAGGGCAATCATCATATGCACTTCATTTGGTGAATCTAATGATCGCAAATGACTGTAAACCTAGCATTGCCACATTCTGTACC
ATCATTGATGCCTTCTGCAAGGAGGATATGGAAAGGAGGAGGATGGGGATCGATTATTAA
Protein sequenceShow/hide protein sequence
MFVNVRRLQNSFKVHWSSSLSSSQTLIPKFFNEYYYSSDSSTRSFDYIAQFLPSNDGTLKLISVNSVTTNDRRRVSVGLSKAVKLPQGYVLKGLSRNFCPFLLVKIMKLF
ECRETAFAFFKLAFKDDSEETVKSCCVLAHLLAAEQLRFLAQDIVSWVVARIGPGRSKNLAAFMWEGHRMYESDFSVLNTLMRAFMKSEMHFEALEILSKMREVGVTPNP
SAISILFRLLIRAGDCGAVWKLFGDVVRKGPCPNNFIFNLLILEFCRKGWTRIGEALLHVMGKFRCEPDVYSYNIVIHANCLKGQSSYALHLVNLMIANDCKPSIATFCT
IIDAFCKEDMERRRMGIDY