CuGenDBv2

Gene ID	MELO3C006342
Organism	Cucumis melo DHL92 (Melon (DHL92) v4)
Description	S-protein homolog
Genome location	chr06:2661578..2664801
RNA-Seq Expression	MELO3C006342
Synteny	MELO3C006342
Gene Ontology terms	GO:0060320 - rejection of self pollen (biological process) GO:0005576 - extracellular region (cellular component)
InterPro domains	IPR010264 - Plant self-incompatibility S1

Homology

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GenBank top hits

e value

%identity

Alignment

KAG7018836.1 Self-incompatibility protein S1, partial [Cucurbita argyrosperma subsp. argyrosperma]

4.5e-72

93.79

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Query:  MIMKILVSILMLIFFPFFTVFVSLLPAEQLFGIEYEVRVINGFTNNSSLPLVIWCASKDGDIGGRALQEHDDFSWPVKTNFWITTTTSQFSCTVKLDRTR
        MIMKILVSILMLI FPFFTVF+SLLP EQL+GIEYEVRVINGFTNNSSLPLVIWCASKD DIGGRALQEHDDFSWPV+TNFWI TTTSQFSCTVKLDRTR
Subjt:  MIMKILVSILMLIFFPFFTVFVSLLPAEQLFGIEYEVRVINGFTNNSSLPLVIWCASKDGDIGGRALQEHDDFSWPVKTNFWITTTTSQFSCTVKLDRTR

Query:  KSFDAFKVPRDIYRCSALRKCSWLVMEDGFYFSDDEVNWKKDFSW
        KSFDAFKVPRDIYRCSALRKC+WLV+EDGFYFSDDEVNWKKDFSW
Subjt:  KSFDAFKVPRDIYRCSALRKCSWLVMEDGFYFSDDEVNWKKDFSW

TYK17379.1 self-incompatibility family protein [Cucumis melo var. makuwa]

3.9e-76

99.31

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Query:  MIMKILVSILMLIFFPFFTVFVSLLPAEQLFGIEYEVRVINGFTNNSSLPLVIWCASKDGDIGGRALQEHDDFSWPVKTNFWITTTTSQFSCTVKLDRTR
        MIMKILVSILMLIFFPFFTVFVSLLPAEQLFGIEYEVRVINGFTNNSSLPLVIWCASKDGDIGGRALQEHDDFSWPVKTNFWI TTTSQFSCTVKLDRTR
Subjt:  MIMKILVSILMLIFFPFFTVFVSLLPAEQLFGIEYEVRVINGFTNNSSLPLVIWCASKDGDIGGRALQEHDDFSWPVKTNFWITTTTSQFSCTVKLDRTR

Query:  KSFDAFKVPRDIYRCSALRKCSWLVMEDGFYFSDDEVNWKKDFSW
        KSFDAFKVPRDIYRCSALRKCSWLVMEDGFYFSDDEVNWKKDFSW
Subjt:  KSFDAFKVPRDIYRCSALRKCSWLVMEDGFYFSDDEVNWKKDFSW

XP_004134017.2 S-protein homolog 6 [Cucumis sativus]

3.5e-77

100

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Query:  MKILVSILMLIFFPFFTVFVSLLPAEQLFGIEYEVRVINGFTNNSSLPLVIWCASKDGDIGGRALQEHDDFSWPVKTNFWITTTTSQFSCTVKLDRTRKS
        MKILVSILMLIFFPFFTVFVSLLPAEQLFGIEYEVRVINGFTNNSSLPLVIWCASKDGDIGGRALQEHDDFSWPVKTNFWITTTTSQFSCTVKLDRTRKS
Subjt:  MKILVSILMLIFFPFFTVFVSLLPAEQLFGIEYEVRVINGFTNNSSLPLVIWCASKDGDIGGRALQEHDDFSWPVKTNFWITTTTSQFSCTVKLDRTRKS

Query:  FDAFKVPRDIYRCSALRKCSWLVMEDGFYFSDDEVNWKKDFSW
        FDAFKVPRDIYRCSALRKCSWLVMEDGFYFSDDEVNWKKDFSW
Subjt:  FDAFKVPRDIYRCSALRKCSWLVMEDGFYFSDDEVNWKKDFSW

XP_016898907.1 PREDICTED: uncharacterized protein LOC103483510 [Cucumis melo]

4.2e-78

100

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Query:  MIMKILVSILMLIFFPFFTVFVSLLPAEQLFGIEYEVRVINGFTNNSSLPLVIWCASKDGDIGGRALQEHDDFSWPVKTNFWITTTTSQFSCTVKLDRTR
        MIMKILVSILMLIFFPFFTVFVSLLPAEQLFGIEYEVRVINGFTNNSSLPLVIWCASKDGDIGGRALQEHDDFSWPVKTNFWITTTTSQFSCTVKLDRTR
Subjt:  MIMKILVSILMLIFFPFFTVFVSLLPAEQLFGIEYEVRVINGFTNNSSLPLVIWCASKDGDIGGRALQEHDDFSWPVKTNFWITTTTSQFSCTVKLDRTR

Query:  KSFDAFKVPRDIYRCSALRKCSWLVMEDGFYFSDDEVNWKKDFSW
        KSFDAFKVPRDIYRCSALRKCSWLVMEDGFYFSDDEVNWKKDFSW
Subjt:  KSFDAFKVPRDIYRCSALRKCSWLVMEDGFYFSDDEVNWKKDFSW

XP_038876719.1 S-protein homolog 6-like [Benincasa hispida]

4.8e-74

97.2

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Query:  MKILVSILMLIFFPFFTVFVSLLPAEQLFGIEYEVRVINGFTNNSSLPLVIWCASKDGDIGGRALQEHDDFSWPVKTNFWITTTTSQFSCTVKLDRTRKS
        MKIL+SILMLIFFPFF+VFVSLLPAEQLFGIEYEVRVINGFTNNSSLPLVIWCASKD DIGGRALQEHDDFSWPVKTNFWI TTTSQFSCTVKLDRTRKS
Subjt:  MKILVSILMLIFFPFFTVFVSLLPAEQLFGIEYEVRVINGFTNNSSLPLVIWCASKDGDIGGRALQEHDDFSWPVKTNFWITTTTSQFSCTVKLDRTRKS

Query:  FDAFKVPRDIYRCSALRKCSWLVMEDGFYFSDDEVNWKKDFSW
        FDAFKVPRDIYRCSALRKCSWLVMEDGFYFSDDEVNWKKDFSW
Subjt:  FDAFKVPRDIYRCSALRKCSWLVMEDGFYFSDDEVNWKKDFSW

TrEMBL top hits

e value

%identity

Alignment

A0A0A0L6V3 S-protein homolog

1.7e-69

65.3

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Query:  AFQLQKAIGALEDFRRRYFLWTYSTFGTIGVAIIQSFHIAYFKSTKKEAKKLASRPYKATLPSFAPENLSFHSFMIMKILVSILMLIFFPFFTVFVSLLP
        AF LQKAIGALEDFRRRYFLWT                  + K T K  K                                                  
Subjt:  AFQLQKAIGALEDFRRRYFLWTYSTFGTIGVAIIQSFHIAYFKSTKKEAKKLASRPYKATLPSFAPENLSFHSFMIMKILVSILMLIFFPFFTVFVSLLP

Query:  AEQLFGIEYEVRVINGFTNNSSLPLVIWCASKDGDIGGRALQEHDDFSWPVKTNFWITTTTSQFSCTVKLDRTRKSFDAFKVPRDIYRCSALRKCSWLVM
         EQLFGIEYEVRVINGFTNNSSLPLVIWCASKDGDIGGRALQEHDDFSWPVKTNFWITTTTSQFSCTVKLDRTRKSFDAFKVPRDIYRCSALRKCSWLVM
Subjt:  AEQLFGIEYEVRVINGFTNNSSLPLVIWCASKDGDIGGRALQEHDDFSWPVKTNFWITTTTSQFSCTVKLDRTRKSFDAFKVPRDIYRCSALRKCSWLVM

Query:  EDGFYFSDDEVNWKKDFSW
        EDGFYFSDDEVNWKKDFSW
Subjt:  EDGFYFSDDEVNWKKDFSW

A0A1S4DSD2 S-protein homolog

2.0e-78

100

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Query:  MIMKILVSILMLIFFPFFTVFVSLLPAEQLFGIEYEVRVINGFTNNSSLPLVIWCASKDGDIGGRALQEHDDFSWPVKTNFWITTTTSQFSCTVKLDRTR
        MIMKILVSILMLIFFPFFTVFVSLLPAEQLFGIEYEVRVINGFTNNSSLPLVIWCASKDGDIGGRALQEHDDFSWPVKTNFWITTTTSQFSCTVKLDRTR
Subjt:  MIMKILVSILMLIFFPFFTVFVSLLPAEQLFGIEYEVRVINGFTNNSSLPLVIWCASKDGDIGGRALQEHDDFSWPVKTNFWITTTTSQFSCTVKLDRTR

Query:  KSFDAFKVPRDIYRCSALRKCSWLVMEDGFYFSDDEVNWKKDFSW
        KSFDAFKVPRDIYRCSALRKCSWLVMEDGFYFSDDEVNWKKDFSW
Subjt:  KSFDAFKVPRDIYRCSALRKCSWLVMEDGFYFSDDEVNWKKDFSW

A0A5A7U6C9 S-protein homolog

2.0e-78

100

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Query:  MIMKILVSILMLIFFPFFTVFVSLLPAEQLFGIEYEVRVINGFTNNSSLPLVIWCASKDGDIGGRALQEHDDFSWPVKTNFWITTTTSQFSCTVKLDRTR
        MIMKILVSILMLIFFPFFTVFVSLLPAEQLFGIEYEVRVINGFTNNSSLPLVIWCASKDGDIGGRALQEHDDFSWPVKTNFWITTTTSQFSCTVKLDRTR
Subjt:  MIMKILVSILMLIFFPFFTVFVSLLPAEQLFGIEYEVRVINGFTNNSSLPLVIWCASKDGDIGGRALQEHDDFSWPVKTNFWITTTTSQFSCTVKLDRTR

Query:  KSFDAFKVPRDIYRCSALRKCSWLVMEDGFYFSDDEVNWKKDFSW
        KSFDAFKVPRDIYRCSALRKCSWLVMEDGFYFSDDEVNWKKDFSW
Subjt:  KSFDAFKVPRDIYRCSALRKCSWLVMEDGFYFSDDEVNWKKDFSW

A0A5D3D3G0 S-protein homolog

1.9e-76

99.31

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Query:  MIMKILVSILMLIFFPFFTVFVSLLPAEQLFGIEYEVRVINGFTNNSSLPLVIWCASKDGDIGGRALQEHDDFSWPVKTNFWITTTTSQFSCTVKLDRTR
        MIMKILVSILMLIFFPFFTVFVSLLPAEQLFGIEYEVRVINGFTNNSSLPLVIWCASKDGDIGGRALQEHDDFSWPVKTNFWI TTTSQFSCTVKLDRTR
Subjt:  MIMKILVSILMLIFFPFFTVFVSLLPAEQLFGIEYEVRVINGFTNNSSLPLVIWCASKDGDIGGRALQEHDDFSWPVKTNFWITTTTSQFSCTVKLDRTR

Query:  KSFDAFKVPRDIYRCSALRKCSWLVMEDGFYFSDDEVNWKKDFSW
        KSFDAFKVPRDIYRCSALRKCSWLVMEDGFYFSDDEVNWKKDFSW
Subjt:  KSFDAFKVPRDIYRCSALRKCSWLVMEDGFYFSDDEVNWKKDFSW

A0A6J1GCS3 S-protein homolog

4.5e-70

91.61

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Query:  MKILVSILMLIFFPFFTVFVSLLPAEQLFGIEYEVRVINGFTNNSSLPLVIWCASKDGDIGGRALQEHDDFSWPVKTNFWITTTTSQFSCTVKLDRTRKS
        MKIL+SILMLIFFPFFTVF+SLLP + L+GIEYEVRVINGFTNNSSLPLVIWCASKD DIGGRALQEHDDFSW VKTNFWI TTTSQFSCTVKLDRTR+S
Subjt:  MKILVSILMLIFFPFFTVFVSLLPAEQLFGIEYEVRVINGFTNNSSLPLVIWCASKDGDIGGRALQEHDDFSWPVKTNFWITTTTSQFSCTVKLDRTRKS

Query:  FDAFKVPRDIYRCSALRKCSWLVMEDGFYFSDDEVNWKKDFSW
        FDAFKVPRDIYRCSA RKCSWLVMEDGFYFSDDEVNWKK+FSW
Subjt:  FDAFKVPRDIYRCSALRKCSWLVMEDGFYFSDDEVNWKKDFSW

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits

e value

%identity

Alignment

AT1G26798.1 Plant self-incompatibility protein S1 family

5.9e-06

30.22

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Query:  NLSFHSFMIMKILVSILMLIFFPFFTVFVSLLPAEQLFGIEYEVRVINGFTNNSSLPLVIWCASKDGDIGGRALQEHDDFSWPVKTNFWITTTTSQFSCT
        N  F S +I  +++    L F  + +V V L  A +       V +IN  T N    LV+ C +K  D+G  AL+  +   +  + N   TTT   ++CT
Subjt:  NLSFHSFMIMKILVSILMLIFFPFFTVFVSLLPAEQLFGIEYEVRVINGFTNNSSLPLVIWCASKDGDIGGRALQEHDDFSWPVKTNFWITTTTSQFSCT

Query:  VKLDRTRKSFDAFKVPRD---IYRCSALRKCSWLVMEDG
               K+FD F+V RD      C   R+C W + E G
Subjt:  VKLDRTRKSFDAFKVPRD---IYRCSALRKCSWLVMEDG

AT3G24060.1 Plant self-incompatibility protein S1 family

1.8e-39

54.23

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Query:  ILVSILMLIFFPFFTVFVSLLPAEQLF-GIEYEVRVINGFTNNSSLPLVIWCASKDGDIGGRALQEHDDFSWPVKTNFWITTTTSQFSCTVKLDRTRKSF
        I++ + MLI      +F  +L  + +F G E++VRVIN F +NSSLPLVIWC S  GD+GGRALQE DDF W  K + W  +  ++++CT+K D  RK F
Subjt:  ILVSILMLIFFPFFTVFVSLLPAEQLF-GIEYEVRVINGFTNNSSLPLVIWCASKDGDIGGRALQEHDDFSWPVKTNFWITTTTSQFSCTVKLDRTRKSF

Query:  DAFKVPRDIYRCSALRKCSWLVMEDGFYFSDDEVNWKKDFSW
        +AFKV RD  RC + +KCSW V EDGFYFS DEV W KDFSW
Subjt:  DAFKVPRDIYRCSALRKCSWLVMEDGFYFSDDEVNWKKDFSW

Sequences

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CDS sequence

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ATGCAAAATGATATGAATGATGATTTAGACTTTTGCCTTACGCCTTTGACCGCAGCTTTCCAACTTCAAAAGGCCATTGGAGCTCTCGAGGATTTTCGAAGGAGATACTT
TCTGTGGACTTACAGTACTTTCGGGACTATTGGCGTCGCTATTATACAGAGCTTTCACATCGCATATTTTAAGTCCACGAAAAAAGAAGCTAAGAAGCTAGCTTCGAGAC
CATATAAAGCAACACTGCCATCATTTGCACCAGAAAATTTGAGTTTCCATTCTTTCATGATCATGAAGATTCTCGTTAGCATTCTGATGCTCATTTTCTTCCCATTCTTC
ACTGTTTTCGTGTCATTGTTACCTGCAGAGCAACTGTTTGGCATAGAATACGAAGTCCGTGTGATCAATGGCTTCACAAACAACTCCTCACTTCCTCTAGTGATATGGTG
CGCTTCCAAAGATGGTGATATTGGCGGGCGTGCACTCCAGGAGCATGATGATTTCAGTTGGCCTGTCAAGACCAACTTCTGGATTACTACAACAACCTCTCAATTCTCAT
GCACTGTCAAATTGGACCGTACAAGGAAGAGTTTTGATGCATTCAAGGTACCAAGAGATATCTATCGCTGTAGTGCTCTCAGGAAATGCTCATGGCTGGTTATGGAAGAT
GGGTTTTATTTCAGTGATGATGAAGTAAACTGGAAGAAGGATTTCTCATGGCGAATGATAATTTACGCTAAAATTGAAACATCCACAACCACAACAGTGGATTGTTTGGG
TTTTTGCAATTCCTCTCCGTTGGCCCCGCCCATGGGTTTGTTCTCATTAAATCTGGCAGGCGAGGATTGTGAATGA

mRNA sequence

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Protein sequence

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MQNDMNDDLDFCLTPLTAAFQLQKAIGALEDFRRRYFLWTYSTFGTIGVAIIQSFHIAYFKSTKKEAKKLASRPYKATLPSFAPENLSFHSFMIMKILVSILMLIFFPFF
TVFVSLLPAEQLFGIEYEVRVINGFTNNSSLPLVIWCASKDGDIGGRALQEHDDFSWPVKTNFWITTTTSQFSCTVKLDRTRKSFDAFKVPRDIYRCSALRKCSWLVMED
GFYFSDDEVNWKKDFSWRMIIYAKIETSTTTTVDCLGFCNSSPLAPPMGLFSLNLAGEDCE

MELO3C006342 (gene) of Melon (DHL92) v4 genome