; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

MELO3C006490 (gene) of Melon (DHL92) v4 genome

Gene IDMELO3C006490
OrganismCucumis melo DHL92 (Melon (DHL92) v4)
Descriptionvegetative cell wall protein gp1
Genome locationchr06:3557436..3558008
RNA-Seq ExpressionMELO3C006490
SyntenyMELO3C006490
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6597407.1 hypothetical protein SDJN03_10587, partial [Cucurbita argyrosperma subsp. sororia]7.7e-4465.78Show/hide
Query:  MSCTSLFSFTLITKTLPSYY--PSSSNFVTPLLFSHSQFLSFNEYSTSLSRSMLSCDSPEFPKSRPVPPPSLPLEIPQFSPPPEIDPSTPSELPSITPEP
        MSCTS FSFTLI KTLP YY   SSSN V P   SH +FL F   S  LSR +L  DSPEFP+  P+P PS+PLEIPQ S  PEIDP TP ELP +TP P
Subjt:  MSCTSLFSFTLITKTLPSYY--PSSSNFVTPLLFSHSQFLSFNEYSTSLSRSMLSCDSPEFPKSRPVPPPSLPLEIPQFSPPPEIDPSTPSELPSITPEP

Query:  DF---PDPRPPGPEFPKPPSPSPPGIDVPVPPRKPPDIEPPWPGSPVPGPEILPPSPPEEMPPRPPGPPRPFGPEILTSPSPTDLVP
        DF   P P PPGP+ P PP PSPPGIDVP+PP KPPDIEPP PGSPVP P+ILPP PPE  PPRPP      GPEILTSPS  D+ P
Subjt:  DF---PDPRPPGPEFPKPPSPSPPGIDVPVPPRKPPDIEPPWPGSPVPGPEILPPSPPEEMPPRPPGPPRPFGPEILTSPSPTDLVP

KGN56930.1 hypothetical protein Csa_011403 [Cucumis sativus]1.5e-7184.29Show/hide
Query:  MAVRMSCTSLFSFTLITKTLPSYYPSSSNF-VTPLLFSHSQFLSFNEYSTSLSRSMLSCDSPEFPKSRPVPPPSLPLEIPQFSPPPEIDPSTPSELPSIT
        MAVRMS TSLFSFTLI KTLPSYYP SSNF + P LFSHSQFL FNEY  SLS S+LS DSPEFP+ RPVPPPS PLEIPQFSPPPEIDPSTPSELPSIT
Subjt:  MAVRMSCTSLFSFTLITKTLPSYYPSSSNF-VTPLLFSHSQFLSFNEYSTSLSRSMLSCDSPEFPKSRPVPPPSLPLEIPQFSPPPEIDPSTPSELPSIT

Query:  PEPDFPDPRPPGPEFPKPPSPSPPGIDVPVPPRKPPDIEPPWPGSPVPGPEILPPSPPEEMPPRPPGPPRPFGPEILTSPSPTDLVPPTYI
        PEP+FP PRPPGPEFPKPP PSPPGIDVP+PPRKPP+IEPPWPGSPVP PEILPPSPPEE+PPRPP PPRPFGPEILTS SP   V  TYI
Subjt:  PEPDFPDPRPPGPEFPKPPSPSPPGIDVPVPPRKPPDIEPPWPGSPVPGPEILPPSPPEEMPPRPPGPPRPFGPEILTSPSPTDLVPPTYI

TYK17238.1 hypothetical protein E5676_scaffold434G00890 [Cucumis melo var. makuwa]2.2e-9198.42Show/hide
Query:  MAVRMSCTSLFSFTLITKTLPSYYPSSSNFVTPLLFSHSQFLSFNEYSTSLSRSMLSCDSPEFPKSRPVPPPSLPLEIPQFSPPPEIDPSTPSELPSITP
        MAVRMSCTSLFSFTLITKTLPSYYPSSSNFVTPLLFSHSQFLSFNEYSTSLSRSMLS DSPEFPKSRPVPPPSLPLEIPQFSPPPEIDPSTPSELPSITP
Subjt:  MAVRMSCTSLFSFTLITKTLPSYYPSSSNFVTPLLFSHSQFLSFNEYSTSLSRSMLSCDSPEFPKSRPVPPPSLPLEIPQFSPPPEIDPSTPSELPSITP

Query:  EPDFPDPRPPGPEFPKPPSPSPPGIDVPVPPRKPPDIEPPWPGSPVPGPEILPPSPPEEMPPRPPGPPRPFGPEILTSPSPTDLVPPTYI
        EPDFPDPRPPGPEFPKPPSPSPPGIDVPVPPR+PPDIEPPWPGSPVPGPEILPPSPPEEMPPRPPGPPRPFGPEILTSPSPTD VPPTYI
Subjt:  EPDFPDPRPPGPEFPKPPSPSPPGIDVPVPPRKPPDIEPPWPGSPVPGPEILPPSPPEEMPPRPPGPPRPFGPEILTSPSPTDLVPPTYI

XP_022949559.1 vegetative cell wall protein gp1 [Cucurbita moschata]2.2e-4365.78Show/hide
Query:  MSCTSLFSFTLITKTLPSYY--PSSSNFVTPLLFSHSQFLSFNEYSTSLSRSMLSCDSPEFPKSRPVPPPSLPLEIPQFSPPPEIDPSTPSELPSITPEP
        MSCTS FSFTLI KTLP YY   SSSN V P   SH +FL F   S  LSR +L  DSPEFP+  P+P PS+PLEIPQ S  PEIDP TP ELP +TP P
Subjt:  MSCTSLFSFTLITKTLPSYY--PSSSNFVTPLLFSHSQFLSFNEYSTSLSRSMLSCDSPEFPKSRPVPPPSLPLEIPQFSPPPEIDPSTPSELPSITPEP

Query:  DF---PDPRPPGPEFPKPPSPSPPGIDVPVPPRKPPDIEPPWPGSPVPGPEILPPSPPEEMPPRPPGPPRPFGPEILTSPSPTDLVP
        DF   P P PPGP+ P PP PSPPGIDVP+PP KPPDIEPP PGSPVP P+ILPP PPE  PPRPP      GPEILTSPS  D+ P
Subjt:  DF---PDPRPPGPEFPKPPSPSPPGIDVPVPPRKPPDIEPPWPGSPVPGPEILPPSPPEEMPPRPPGPPRPFGPEILTSPSPTDLVP

XP_022975412.1 leucine-rich repeat extensin-like protein 3 [Cucurbita maxima]2.7e-4466.31Show/hide
Query:  MSCTSLFSFTLITKTLPSYY--PSSSNFVTPLLFSHSQFLSFNEYSTSLSRSMLSCDSPEFPKSRPVPPPSLPLEIPQFSPPPEIDPSTPSELPSITPEP
        MSCTS FSFTLI KTLP YY   SSSN V P   SH +FL F   S  LSR +L  DSPEFP+  P+P PS+PLEIPQ S  PEIDP TP ELP ITP P
Subjt:  MSCTSLFSFTLITKTLPSYY--PSSSNFVTPLLFSHSQFLSFNEYSTSLSRSMLSCDSPEFPKSRPVPPPSLPLEIPQFSPPPEIDPSTPSELPSITPEP

Query:  DF---PDPRPPGPEFPKPPSPSPPGIDVPVPPRKPPDIEPPWPGSPVPGPEILPPSPPEEMPPRPPGPPRPFGPEILTSPSPTDLVP
        DF   P P PPGP+FP PP PSPPGIDVP+PP KPPDIEPP PGSPVP P+ILPP PPE  PPRPP      GPEI TSPS  D+ P
Subjt:  DF---PDPRPPGPEFPKPPSPSPPGIDVPVPPRKPPDIEPPWPGSPVPGPEILPPSPPEEMPPRPPGPPRPFGPEILTSPSPTDLVP

TrEMBL top hitse value%identityAlignment
A0A0A0L4M0 Uncharacterized protein7.2e-7284.29Show/hide
Query:  MAVRMSCTSLFSFTLITKTLPSYYPSSSNF-VTPLLFSHSQFLSFNEYSTSLSRSMLSCDSPEFPKSRPVPPPSLPLEIPQFSPPPEIDPSTPSELPSIT
        MAVRMS TSLFSFTLI KTLPSYYP SSNF + P LFSHSQFL FNEY  SLS S+LS DSPEFP+ RPVPPPS PLEIPQFSPPPEIDPSTPSELPSIT
Subjt:  MAVRMSCTSLFSFTLITKTLPSYYPSSSNF-VTPLLFSHSQFLSFNEYSTSLSRSMLSCDSPEFPKSRPVPPPSLPLEIPQFSPPPEIDPSTPSELPSIT

Query:  PEPDFPDPRPPGPEFPKPPSPSPPGIDVPVPPRKPPDIEPPWPGSPVPGPEILPPSPPEEMPPRPPGPPRPFGPEILTSPSPTDLVPPTYI
        PEP+FP PRPPGPEFPKPP PSPPGIDVP+PPRKPP+IEPPWPGSPVP PEILPPSPPEE+PPRPP PPRPFGPEILTS SP   V  TYI
Subjt:  PEPDFPDPRPPGPEFPKPPSPSPPGIDVPVPPRKPPDIEPPWPGSPVPGPEILPPSPPEEMPPRPPGPPRPFGPEILTSPSPTDLVPPTYI

A0A2P6QPT4 Uncharacterized protein4.0e-0640.4Show/hide
Query:  MSCTSLFSFTLITKTLP--SYYPSSSNFVTPLLFSHSQFLSFNEYSTSLSRSMLSCDSPEFPKSRPVPPPSLPLEIPQFSPP-PEID-PSTPSELPSI--
        MS  S  SFTLI +T+P  S   +S++  TP L    +   F      L  + LS    E+P   P          P+FSPP P  D PS P E+P I  
Subjt:  MSCTSLFSFTLITKTLP--SYYPSSSNFVTPLLFSHSQFLSFNEYSTSLSRSMLSCDSPEFPKSRPVPPPSLPLEIPQFSPP-PEID-PSTPSELPSI--

Query:  TPEPDFPDPRPPGP----EFPKPPSPSP-PGIDVPVPPRKP---PDIEPPWPGSPVPGPEILPPSPPEEMPPRPPGPPRPFGPEILTSPSPTDLVPPT
        +PE D P   P  P     +P P  P P PG D PVPP KP   PD+  P+P +P+PGP+ LPP PP+ +PP PP      GPEI+  P+P    PPT
Subjt:  TPEPDFPDPRPPGP----EFPKPPSPSP-PGIDVPVPPRKP---PDIEPPWPGSPVPGPEILPPSPPEEMPPRPPGPPRPFGPEILTSPSPTDLVPPT

A0A5D3D162 Uncharacterized protein1.1e-9198.42Show/hide
Query:  MAVRMSCTSLFSFTLITKTLPSYYPSSSNFVTPLLFSHSQFLSFNEYSTSLSRSMLSCDSPEFPKSRPVPPPSLPLEIPQFSPPPEIDPSTPSELPSITP
        MAVRMSCTSLFSFTLITKTLPSYYPSSSNFVTPLLFSHSQFLSFNEYSTSLSRSMLS DSPEFPKSRPVPPPSLPLEIPQFSPPPEIDPSTPSELPSITP
Subjt:  MAVRMSCTSLFSFTLITKTLPSYYPSSSNFVTPLLFSHSQFLSFNEYSTSLSRSMLSCDSPEFPKSRPVPPPSLPLEIPQFSPPPEIDPSTPSELPSITP

Query:  EPDFPDPRPPGPEFPKPPSPSPPGIDVPVPPRKPPDIEPPWPGSPVPGPEILPPSPPEEMPPRPPGPPRPFGPEILTSPSPTDLVPPTYI
        EPDFPDPRPPGPEFPKPPSPSPPGIDVPVPPR+PPDIEPPWPGSPVPGPEILPPSPPEEMPPRPPGPPRPFGPEILTSPSPTD VPPTYI
Subjt:  EPDFPDPRPPGPEFPKPPSPSPPGIDVPVPPRKPPDIEPPWPGSPVPGPEILPPSPPEEMPPRPPGPPRPFGPEILTSPSPTDLVPPTYI

A0A6J1GD64 vegetative cell wall protein gp11.1e-4365.78Show/hide
Query:  MSCTSLFSFTLITKTLPSYY--PSSSNFVTPLLFSHSQFLSFNEYSTSLSRSMLSCDSPEFPKSRPVPPPSLPLEIPQFSPPPEIDPSTPSELPSITPEP
        MSCTS FSFTLI KTLP YY   SSSN V P   SH +FL F   S  LSR +L  DSPEFP+  P+P PS+PLEIPQ S  PEIDP TP ELP +TP P
Subjt:  MSCTSLFSFTLITKTLPSYY--PSSSNFVTPLLFSHSQFLSFNEYSTSLSRSMLSCDSPEFPKSRPVPPPSLPLEIPQFSPPPEIDPSTPSELPSITPEP

Query:  DF---PDPRPPGPEFPKPPSPSPPGIDVPVPPRKPPDIEPPWPGSPVPGPEILPPSPPEEMPPRPPGPPRPFGPEILTSPSPTDLVP
        DF   P P PPGP+ P PP PSPPGIDVP+PP KPPDIEPP PGSPVP P+ILPP PPE  PPRPP      GPEILTSPS  D+ P
Subjt:  DF---PDPRPPGPEFPKPPSPSPPGIDVPVPPRKPPDIEPPWPGSPVPGPEILPPSPPEEMPPRPPGPPRPFGPEILTSPSPTDLVP

A0A6J1IL49 leucine-rich repeat extensin-like protein 31.3e-4466.31Show/hide
Query:  MSCTSLFSFTLITKTLPSYY--PSSSNFVTPLLFSHSQFLSFNEYSTSLSRSMLSCDSPEFPKSRPVPPPSLPLEIPQFSPPPEIDPSTPSELPSITPEP
        MSCTS FSFTLI KTLP YY   SSSN V P   SH +FL F   S  LSR +L  DSPEFP+  P+P PS+PLEIPQ S  PEIDP TP ELP ITP P
Subjt:  MSCTSLFSFTLITKTLPSYY--PSSSNFVTPLLFSHSQFLSFNEYSTSLSRSMLSCDSPEFPKSRPVPPPSLPLEIPQFSPPPEIDPSTPSELPSITPEP

Query:  DF---PDPRPPGPEFPKPPSPSPPGIDVPVPPRKPPDIEPPWPGSPVPGPEILPPSPPEEMPPRPPGPPRPFGPEILTSPSPTDLVP
        DF   P P PPGP+FP PP PSPPGIDVP+PP KPPDIEPP PGSPVP P+ILPP PPE  PPRPP      GPEI TSPS  D+ P
Subjt:  DF---PDPRPPGPEFPKPPSPSPPGIDVPVPPRKPPDIEPPWPGSPVPGPEILPPSPPEEMPPRPPGPPRPFGPEILTSPSPTDLVP

SwissProt top hitse value%identityAlignment
Q9FPQ6 Vegetative cell wall protein gp13.6e-0442.95Show/hide
Query:  SPEFPK-SRPVPPPSLPLEIPQFSPPPEIDPSTPSELPSITPE---PDFPDPRPPGPEFPKPPSPSPPGIDVPVPPR-KPPDIEPPWPGSPVPGPEILPP
        SP  P  S PVPP   P   P  +PP    P+ PS  P + P    P  P P PP P  P PPSPSPP    PVPP   PP   PP P  P P P   PP
Subjt:  SPEFPK-SRPVPPPSLPLEIPQFSPPPEIDPSTPSELPSITPE---PDFPDPRPPGPEFPKPPSPSPPGIDVPVPPR-KPPDIEPPWPGSPVPGPEILPP

Query:  SPPEEMPPRPPGP---------------PRPFGPEILTSPSPTDLVPPT
        SPP   PPRPP P               P P  P    SPSP   VPP+
Subjt:  SPPEEMPPRPPGP---------------PRPFGPEILTSPSPTDLVPPT

Arabidopsis top hitse value%identityAlignment
AT5G43770.1 proline-rich family protein3.4e-0545.45Show/hide
Query:  EFPKSRPVPPPSLPLEIPQFSPPPEIDPS-TPSELPSITPE-PDFPDPRPPGPEFPKPPSPSPPGIDVPVP--PRKPPDIEPPWPGSPVPGPEILPPSPP
        E P      P   PLE+P+    PEI PS TP E+ ++  + P    P+ PGPEFP PPSPSPP  D P P  P+ PPD+ PP    P P P+I PP  P
Subjt:  EFPKSRPVPPPSLPLEIPQFSPPPEIDPS-TPSELPSITPE-PDFPDPRPPGPEFPKPPSPSPPGIDVPVP--PRKPPDIEPPWPGSPVPGPEILPPSPP

Query:  EEMPPRPPG--PPRPFGPEIL
              PPG  PP P GP I+
Subjt:  EEMPPRPPG--PPRPFGPEIL


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCCGTAAGAATGTCCTGCACCTCCCTATTCTCTTTCACTCTCATCACAAAAACGCTTCCTAGTTATTACCCTTCTTCTTCCAATTTCGTCACTCCTCTCCTCTTTTC
TCATTCCCAATTCCTCTCCTTCAATGAATACTCCACGTCTCTCTCGCGCTCTATGCTTTCGTGTGACTCGCCGGAGTTTCCCAAAAGCCGCCCGGTTCCACCGCCTTCTT
TACCCCTCGAAATTCCACAATTTTCGCCTCCTCCGGAGATTGACCCAAGCACTCCGTCGGAGCTTCCGTCGATAACTCCGGAGCCGGATTTTCCTGATCCCCGGCCGCCA
GGACCAGAGTTTCCGAAGCCTCCGTCGCCGTCTCCTCCGGGAATCGATGTACCGGTACCACCCCGTAAGCCTCCAGATATAGAGCCACCATGGCCTGGTTCACCAGTACC
AGGACCAGAAATTTTACCGCCGTCGCCACCGGAGGAGATGCCACCTAGACCTCCTGGTCCACCTAGACCTTTTGGTCCAGAGATATTGACGTCGCCGTCTCCAACTGATC
TGGTTCCTCCGACGTACATTTAA
mRNA sequenceShow/hide mRNA sequence
ATGGCCGTAAGAATGTCCTGCACCTCCCTATTCTCTTTCACTCTCATCACAAAAACGCTTCCTAGTTATTACCCTTCTTCTTCCAATTTCGTCACTCCTCTCCTCTTTTC
TCATTCCCAATTCCTCTCCTTCAATGAATACTCCACGTCTCTCTCGCGCTCTATGCTTTCGTGTGACTCGCCGGAGTTTCCCAAAAGCCGCCCGGTTCCACCGCCTTCTT
TACCCCTCGAAATTCCACAATTTTCGCCTCCTCCGGAGATTGACCCAAGCACTCCGTCGGAGCTTCCGTCGATAACTCCGGAGCCGGATTTTCCTGATCCCCGGCCGCCA
GGACCAGAGTTTCCGAAGCCTCCGTCGCCGTCTCCTCCGGGAATCGATGTACCGGTACCACCCCGTAAGCCTCCAGATATAGAGCCACCATGGCCTGGTTCACCAGTACC
AGGACCAGAAATTTTACCGCCGTCGCCACCGGAGGAGATGCCACCTAGACCTCCTGGTCCACCTAGACCTTTTGGTCCAGAGATATTGACGTCGCCGTCTCCAACTGATC
TGGTTCCTCCGACGTACATTTAA
Protein sequenceShow/hide protein sequence
MAVRMSCTSLFSFTLITKTLPSYYPSSSNFVTPLLFSHSQFLSFNEYSTSLSRSMLSCDSPEFPKSRPVPPPSLPLEIPQFSPPPEIDPSTPSELPSITPEPDFPDPRPP
GPEFPKPPSPSPPGIDVPVPPRKPPDIEPPWPGSPVPGPEILPPSPPEEMPPRPPGPPRPFGPEILTSPSPTDLVPPTYI