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MELO3C006643 (gene) of Melon (DHL92) v4 genome

Gene IDMELO3C006643
OrganismCucumis melo DHL92 (Melon (DHL92) v4)
DescriptionE3 ubiquitin-protein ligase RBBP6 isoform X2
Genome locationchr06:4704012..4704900
RNA-Seq ExpressionMELO3C006643
SyntenyMELO3C006643
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004134201.1 uncharacterized protein LOC101221899 isoform X2 [Cucumis sativus]9.5e-6996.03Show/hide
Query:  MVMEDLTEEERRALRGSKFAPLPSQSTSSRSHPRLAHPGGPLKTNKAAALAKFLHRKLHQDPNAFSSINPQILDLAVRNAKASVHSSGTNIRHVDTFDDP
        MVMEDLTEEERRALRGSKFAPLPSQSTSSRSHPRLAHPGGPLKTNKAAALAKFLHRKL+QDPNA SSINPQILDLAVRNAKASVHSSGTNIRHVDTFDDP
Subjt:  MVMEDLTEEERRALRGSKFAPLPSQSTSSRSHPRLAHPGGPLKTNKAAALAKFLHRKLHQDPNAFSSINPQILDLAVRNAKASVHSSGTNIRHVDTFDDP

Query:  EASFDEGESMNSEPKKQKKKNKKKKNKNKKNKRQKIVEDSECGVGKNPNPK
        EASFDEGESMNSEPKKQKKKNKKKKNKNKKNKRQKIVEDSECGVG  P  K
Subjt:  EASFDEGESMNSEPKKQKKKNKKKKNKNKKNKRQKIVEDSECGVGKNPNPK

XP_008438870.1 PREDICTED: uncharacterized protein LOC103483832 [Cucumis melo]2.6e-74100Show/hide
Query:  MVMEDLTEEERRALRGSKFAPLPSQSTSSRSHPRLAHPGGPLKTNKAAALAKFLHRKLHQDPNAFSSINPQILDLAVRNAKASVHSSGTNIRHVDTFDDP
        MVMEDLTEEERRALRGSKFAPLPSQSTSSRSHPRLAHPGGPLKTNKAAALAKFLHRKLHQDPNAFSSINPQILDLAVRNAKASVHSSGTNIRHVDTFDDP
Subjt:  MVMEDLTEEERRALRGSKFAPLPSQSTSSRSHPRLAHPGGPLKTNKAAALAKFLHRKLHQDPNAFSSINPQILDLAVRNAKASVHSSGTNIRHVDTFDDP

Query:  EASFDEGESMNSEPKKQKKKNKKKKNKNKKNKRQKIVEDSECGVGKNPNPKRS
        EASFDEGESMNSEPKKQKKKNKKKKNKNKKNKRQKIVEDSECGVGKNPNPKRS
Subjt:  EASFDEGESMNSEPKKQKKKNKKKKNKNKKNKRQKIVEDSECGVGKNPNPKRS

XP_022956119.1 uncharacterized protein LOC111457905 isoform X2 [Cucurbita moschata]6.8e-5987.1Show/hide
Query:  VMEDLTEEERRALRGSKFAPLPSQSTSSRSHPRLAHPGGPLKTNKAAALAKFLHRKLHQDPNAFSSINPQILDLAVRNAKASV-HSSGTNIRHVDTFDDP
        +MEDL+EEERRALRGSKFAPLPSQ TSSRSHPRLAHPGGPLKTNKAAALAKFL RKLHQDPN  SSINPQIL+LAVRNAKASV  SSGTNIRHVDTFDDP
Subjt:  VMEDLTEEERRALRGSKFAPLPSQSTSSRSHPRLAHPGGPLKTNKAAALAKFLHRKLHQDPNAFSSINPQILDLAVRNAKASV-HSSGTNIRHVDTFDDP

Query:  EASFDEGESMNSEPKKQKKKNKK-KKNKN---KKNKRQKIVEDSECGVGKNPNPK
        EASFD+GE+MNSEPKKQK KNKK KKNKN   KKNKRQKIVEDS CGVGK P  K
Subjt:  EASFDEGESMNSEPKKQKKKNKK-KKNKN---KKNKRQKIVEDSECGVGKNPNPK

XP_022979960.1 uncharacterized protein LOC111479494 [Cucurbita maxima]3.4e-5886.84Show/hide
Query:  MEDLTEEERRALRGSKFAPLPSQSTSSRSHPRLAHPGGPLKTNKAAALAKFLHRKLHQDPNAFSSINPQILDLAVRNAKASV-HSSGTNIRHVDTFDDPE
        MEDL+EEERRALRGSKFAPLPSQ TSSRSHPRLAHPGGPLKTNKAAALAKFL RKLHQDPN  SSINPQIL+LAVRNAKASV  SSGTNIRHVDTFDDPE
Subjt:  MEDLTEEERRALRGSKFAPLPSQSTSSRSHPRLAHPGGPLKTNKAAALAKFLHRKLHQDPNAFSSINPQILDLAVRNAKASV-HSSGTNIRHVDTFDDPE

Query:  ASFDEGESMNSEPKKQKKKNK--KKKNKNKKNKRQKIVEDSECGVGKNPNPK
        ASFD+GE+MNSEPKKQK KNK  KK  K KKNKRQKIVEDS CGVGK P  K
Subjt:  ASFDEGESMNSEPKKQKKKNK--KKKNKNKKNKRQKIVEDSECGVGKNPNPK

XP_031739377.1 uncharacterized protein LOC101221899 isoform X1 [Cucumis sativus]3.0e-6297.79Show/hide
Query:  MVMEDLTEEERRALRGSKFAPLPSQSTSSRSHPRLAHPGGPLKTNKAAALAKFLHRKLHQDPNAFSSINPQILDLAVRNAKASVHSSGTNIRHVDTFDDP
        MVMEDLTEEERRALRGSKFAPLPSQSTSSRSHPRLAHPGGPLKTNKAAALAKFLHRKL+QDPNA SSINPQILDLAVRNAKASVHSSGTNIRHVDTFDDP
Subjt:  MVMEDLTEEERRALRGSKFAPLPSQSTSSRSHPRLAHPGGPLKTNKAAALAKFLHRKLHQDPNAFSSINPQILDLAVRNAKASVHSSGTNIRHVDTFDDP

Query:  EASFDEGESMNSEPKKQKKKNKKKKNKNKKNKRQKI
        EASFDEGESMNSEPKKQKKKNKKKKNKNKKNKRQK+
Subjt:  EASFDEGESMNSEPKKQKKKNKKKKNKNKKNKRQKI

TrEMBL top hitse value%identityAlignment
A0A0A0LAK0 Uncharacterized protein4.6e-6996.03Show/hide
Query:  MVMEDLTEEERRALRGSKFAPLPSQSTSSRSHPRLAHPGGPLKTNKAAALAKFLHRKLHQDPNAFSSINPQILDLAVRNAKASVHSSGTNIRHVDTFDDP
        MVMEDLTEEERRALRGSKFAPLPSQSTSSRSHPRLAHPGGPLKTNKAAALAKFLHRKL+QDPNA SSINPQILDLAVRNAKASVHSSGTNIRHVDTFDDP
Subjt:  MVMEDLTEEERRALRGSKFAPLPSQSTSSRSHPRLAHPGGPLKTNKAAALAKFLHRKLHQDPNAFSSINPQILDLAVRNAKASVHSSGTNIRHVDTFDDP

Query:  EASFDEGESMNSEPKKQKKKNKKKKNKNKKNKRQKIVEDSECGVGKNPNPK
        EASFDEGESMNSEPKKQKKKNKKKKNKNKKNKRQKIVEDSECGVG  P  K
Subjt:  EASFDEGESMNSEPKKQKKKNKKKKNKNKKNKRQKIVEDSECGVGKNPNPK

A0A1S3AY37 uncharacterized protein LOC1034838321.3e-74100Show/hide
Query:  MVMEDLTEEERRALRGSKFAPLPSQSTSSRSHPRLAHPGGPLKTNKAAALAKFLHRKLHQDPNAFSSINPQILDLAVRNAKASVHSSGTNIRHVDTFDDP
        MVMEDLTEEERRALRGSKFAPLPSQSTSSRSHPRLAHPGGPLKTNKAAALAKFLHRKLHQDPNAFSSINPQILDLAVRNAKASVHSSGTNIRHVDTFDDP
Subjt:  MVMEDLTEEERRALRGSKFAPLPSQSTSSRSHPRLAHPGGPLKTNKAAALAKFLHRKLHQDPNAFSSINPQILDLAVRNAKASVHSSGTNIRHVDTFDDP

Query:  EASFDEGESMNSEPKKQKKKNKKKKNKNKKNKRQKIVEDSECGVGKNPNPKRS
        EASFDEGESMNSEPKKQKKKNKKKKNKNKKNKRQKIVEDSECGVGKNPNPKRS
Subjt:  EASFDEGESMNSEPKKQKKKNKKKKNKNKKNKRQKIVEDSECGVGKNPNPKRS

A0A6J1GVW4 uncharacterized protein LOC111457905 isoform X18.2e-5886.54Show/hide
Query:  VMEDLTEEERRALRGSKFAPLPSQSTSSRSHPRLAHPGGPLKTNKAAALAKFLHRKLHQDPNAFSSINPQILDLAVRNAKASV-HSSGTNIRHVDTFDDP
        +MEDL+EEERRALRGSKFAPLPSQ TSSRSHPRLAHPGGPLKTNKAAALAKFL RKLHQDPN  SSINPQIL+LAVRNAKASV  SSGTNIRHVDTFDDP
Subjt:  VMEDLTEEERRALRGSKFAPLPSQSTSSRSHPRLAHPGGPLKTNKAAALAKFLHRKLHQDPNAFSSINPQILDLAVRNAKASV-HSSGTNIRHVDTFDDP

Query:  EASFDEGESMNSEPKKQKKKNKK-KKNKN---KKNKRQ-KIVEDSECGVGKNPNPK
        EASFD+GE+MNSEPKKQK KNKK KKNKN   KKNKRQ KIVEDS CGVGK P  K
Subjt:  EASFDEGESMNSEPKKQKKKNKK-KKNKN---KKNKRQ-KIVEDSECGVGKNPNPK

A0A6J1GY51 uncharacterized protein LOC111457905 isoform X23.3e-5987.1Show/hide
Query:  VMEDLTEEERRALRGSKFAPLPSQSTSSRSHPRLAHPGGPLKTNKAAALAKFLHRKLHQDPNAFSSINPQILDLAVRNAKASV-HSSGTNIRHVDTFDDP
        +MEDL+EEERRALRGSKFAPLPSQ TSSRSHPRLAHPGGPLKTNKAAALAKFL RKLHQDPN  SSINPQIL+LAVRNAKASV  SSGTNIRHVDTFDDP
Subjt:  VMEDLTEEERRALRGSKFAPLPSQSTSSRSHPRLAHPGGPLKTNKAAALAKFLHRKLHQDPNAFSSINPQILDLAVRNAKASV-HSSGTNIRHVDTFDDP

Query:  EASFDEGESMNSEPKKQKKKNKK-KKNKN---KKNKRQKIVEDSECGVGKNPNPK
        EASFD+GE+MNSEPKKQK KNKK KKNKN   KKNKRQKIVEDS CGVGK P  K
Subjt:  EASFDEGESMNSEPKKQKKKNKK-KKNKN---KKNKRQKIVEDSECGVGKNPNPK

A0A6J1IUT6 uncharacterized protein LOC1114794941.6e-5886.84Show/hide
Query:  MEDLTEEERRALRGSKFAPLPSQSTSSRSHPRLAHPGGPLKTNKAAALAKFLHRKLHQDPNAFSSINPQILDLAVRNAKASV-HSSGTNIRHVDTFDDPE
        MEDL+EEERRALRGSKFAPLPSQ TSSRSHPRLAHPGGPLKTNKAAALAKFL RKLHQDPN  SSINPQIL+LAVRNAKASV  SSGTNIRHVDTFDDPE
Subjt:  MEDLTEEERRALRGSKFAPLPSQSTSSRSHPRLAHPGGPLKTNKAAALAKFLHRKLHQDPNAFSSINPQILDLAVRNAKASV-HSSGTNIRHVDTFDDPE

Query:  ASFDEGESMNSEPKKQKKKNK--KKKNKNKKNKRQKIVEDSECGVGKNPNPK
        ASFD+GE+MNSEPKKQK KNK  KK  K KKNKRQKIVEDS CGVGK P  K
Subjt:  ASFDEGESMNSEPKKQKKKNK--KKKNKNKKNKRQKIVEDSECGVGKNPNPK

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT5G18540.1 unknown protein6.4e-3158.02Show/hide
Query:  EDLTEEERRALRGSKFAPLPSQSTSSRSH-PRLAHPGGPLKTNKAAALAKFLHRKLHQDPNAFSSINPQILDLAVRNAKASV-----HSSGTNIRHVDTF
        E+LTE+E+RALRGSKFAPL S  +SSRS  PRLAHPGGPLKTNKAAALAKFL RKL QDPN  +SI+P +++LAV+NAK +V      SSG  I+HV +F
Subjt:  EDLTEEERRALRGSKFAPLPSQSTSSRSH-PRLAHPGGPLKTNKAAALAKFLHRKLHQDPNAFSSINPQILDLAVRNAKASV-----HSSGTNIRHVDTF

Query:  DDPEASFD----EGESMNSEPKK---QKKKNKKKKNKNKKNKRQKIV-EDSECGVGKNPNPK
        +D E S D    E   +N + KK   +KKK +KKK KNKK+K+Q  V ED++    K PN K
Subjt:  DDPEASFD----EGESMNSEPKK---QKKKNKKKKNKNKKNKRQKIV-EDSECGVGKNPNPK

AT5G18540.2 unknown protein3.4e-3256.96Show/hide
Query:  EDLTEEERRALRGSKFAPLPSQSTSSRSH-PRLAHPGGPLKTNKAAALAKFLHRKLHQDPNAFSSINPQILDLAVRNAKASV-----HSSGTNIRHVDTF
        E+LTE+E+RALRGSKFAPL S  +SSRS  PRLAHPGGPLKTNKAAALAKFL RKL QDPN  +SI+P +++LAV+NAK +V      SSG  I+HV +F
Subjt:  EDLTEEERRALRGSKFAPLPSQSTSSRSH-PRLAHPGGPLKTNKAAALAKFLHRKLHQDPNAFSSINPQILDLAVRNAKASV-----HSSGTNIRHVDTF

Query:  DDPEASFD----EGESMNSEPKKQKKKNKKKKNKNKKNKRQKIVEDSECGVGKNPNPK
        +D E S D    E   +N + KK+  K KK++ K KKNK+ KI  D +  + K PN K
Subjt:  DDPEASFD----EGESMNSEPKKQKKKNKKKKNKNKKNKRQKIVEDSECGVGKNPNPK


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTGATGGAAGATCTTACCGAAGAAGAAAGACGTGCTCTACGAGGAAGCAAGTTCGCTCCTCTCCCATCGCAATCCACTTCTTCTCGATCTCACCCAAGGTTGGCTCA
TCCAGGTGGACCATTGAAAACCAACAAAGCCGCGGCTCTCGCTAAGTTTCTTCACCGGAAATTGCACCAAGATCCTAATGCTTTCTCTTCTATTAATCCCCAGATTTTGG
ACCTTGCTGTTCGAAATGCCAAAGCCTCTGTTCATTCCAGTGGTACAAATATTCGGCATGTGGACACATTTGATGACCCTGAGGCTTCTTTTGATGAAGGGGAATCTATG
AATTCTGAGCCTAAAAAACAAAAGAAAAAGAACAAGAAGAAGAAAAATAAAAATAAGAAGAACAAAAGGCAAAAGATTGTTGAGGACTCCGAGTGTGGCGTTGGAAAAAA
CCCAAACCCAAAAAGAAGTTGA
mRNA sequenceShow/hide mRNA sequence
ATGGTGATGGAAGATCTTACCGAAGAAGAAAGACGTGCTCTACGAGGAAGCAAGTTCGCTCCTCTCCCATCGCAATCCACTTCTTCTCGATCTCACCCAAGGTTGGCTCA
TCCAGGTGGACCATTGAAAACCAACAAAGCCGCGGCTCTCGCTAAGTTTCTTCACCGGAAATTGCACCAAGATCCTAATGCTTTCTCTTCTATTAATCCCCAGATTTTGG
ACCTTGCTGTTCGAAATGCCAAAGCCTCTGTTCATTCCAGTGGTACAAATATTCGGCATGTGGACACATTTGATGACCCTGAGGCTTCTTTTGATGAAGGGGAATCTATG
AATTCTGAGCCTAAAAAACAAAAGAAAAAGAACAAGAAGAAGAAAAATAAAAATAAGAAGAACAAAAGGCAAAAGATTGTTGAGGACTCCGAGTGTGGCGTTGGAAAAAA
CCCAAACCCAAAAAGAAGTTGA
Protein sequenceShow/hide protein sequence
MVMEDLTEEERRALRGSKFAPLPSQSTSSRSHPRLAHPGGPLKTNKAAALAKFLHRKLHQDPNAFSSINPQILDLAVRNAKASVHSSGTNIRHVDTFDDPEASFDEGESM
NSEPKKQKKKNKKKKNKNKKNKRQKIVEDSECGVGKNPNPKRS