; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

MELO3C007405 (gene) of Melon (DHL92) v4 genome

Gene IDMELO3C007405
OrganismCucumis melo DHL92 (Melon (DHL92) v4)
DescriptionPeroxisomal membrane protein PMP22
Genome locationchr08:2540859..2544775
RNA-Seq ExpressionMELO3C007405
SyntenyMELO3C007405
Gene Ontology termsGO:0005737 - cytoplasm (cellular component)
GO:0016021 - integral component of membrane (cellular component)
InterPro domainsIPR007248 - Mpv17/PMP22


Homology Show/hide homology
GenBank top hitse value%identityAlignment
TYK13032.1 peroxisomal membrane protein PMP22 [Cucumis melo var. makuwa]2.2e-5578.12Show/hide
Query:  MGSLAKKGLNKYLSQLNQHPLRTKVITSGVLVALSDVTSQKLTGIQKLQLKRILLKV----------------------------------VALEQLTAS
        MGSLAKKGLNKYLSQLNQHPLRTKVITSGVLVALSDVTSQKLTGIQKLQLKRILLKV                                  VALEQLTAS
Subjt:  MGSLAKKGLNKYLSQLNQHPLRTKVITSGVLVALSDVTSQKLTGIQKLQLKRILLKV----------------------------------VALEQLTAS

Query:  PWNHFVFLVYYGLIIEGRTWVQVKAKVKKEFPSLQLTAWMGIIFERSSKIRDVEEILVEN
        PWNHFVFLVYYGLIIEGRTWVQVKAKVKKEFPSLQLTAWMGIIFER SKIRDVEEILVEN
Subjt:  PWNHFVFLVYYGLIIEGRTWVQVKAKVKKEFPSLQLTAWMGIIFERSSKIRDVEEILVEN

XP_004134772.1 peroxisomal membrane protein PMP22 [Cucumis sativus]1.1e-4374.29Show/hide
Query:  MGSLAKKGLNKYLSQLNQHPLRTKVITSGVLVALSDVTSQKLTGIQKLQLKRILLKV----------------------------------VALEQLTAS
        MGSLAKK LNKYLSQLN HPLRTKVITSGVLVALSDVTSQKLTGIQKLQLKRILLKV                                  VALEQLTAS
Subjt:  MGSLAKKGLNKYLSQLNQHPLRTKVITSGVLVALSDVTSQKLTGIQKLQLKRILLKV----------------------------------VALEQLTAS

Query:  PWNHFVFLVYYGLIIEGRTWVQVKAKVKKEFPSLQLTAWM
        PWNHFVFLVYYGLIIEGRTWVQVKAKVKKEFPSLQLTAWM
Subjt:  PWNHFVFLVYYGLIIEGRTWVQVKAKVKKEFPSLQLTAWM

XP_008440019.1 PREDICTED: peroxisomal membrane protein PMP22 [Cucumis melo]6.1e-4575.71Show/hide
Query:  MGSLAKKGLNKYLSQLNQHPLRTKVITSGVLVALSDVTSQKLTGIQKLQLKRILLKV----------------------------------VALEQLTAS
        MGSLAKKGLNKYLSQLNQHPLRTKVITSGVLVALSDVTSQKLTGIQKLQLKRILLKV                                  VALEQLTAS
Subjt:  MGSLAKKGLNKYLSQLNQHPLRTKVITSGVLVALSDVTSQKLTGIQKLQLKRILLKV----------------------------------VALEQLTAS

Query:  PWNHFVFLVYYGLIIEGRTWVQVKAKVKKEFPSLQLTAWM
        PWNHFVFLVYYGLIIEGRTWVQVKAKVKKEFPSLQLTAWM
Subjt:  PWNHFVFLVYYGLIIEGRTWVQVKAKVKKEFPSLQLTAWM

XP_022142011.1 peroxisomal membrane protein PMP22 [Momordica charantia]5.1e-3661.43Show/hide
Query:  MGSLAKKGLNKYLSQLNQHPLRTKVITSGVLVALSDVTSQKLTGIQKLQLKRILLKV----------------------------------VALEQLTAS
        MGS+AKKGL KY+SQL QHPLRTK+IT+GVL  +SDV SQKLTGIQKLQ KR++LKV                                  V LEQLTAS
Subjt:  MGSLAKKGLNKYLSQLNQHPLRTKVITSGVLVALSDVTSQKLTGIQKLQLKRILLKV----------------------------------VALEQLTAS

Query:  PWNHFVFLVYYGLIIEGRTWVQVKAKVKKEFPSLQLTAWM
        PWNHFVFLVYYGL+IE R WV VKAKVKK+FPS+QLTAWM
Subjt:  PWNHFVFLVYYGLIIEGRTWVQVKAKVKKEFPSLQLTAWM

XP_038882944.1 peroxisomal membrane protein PMP22-like [Benincasa hispida]7.9e-3762.14Show/hide
Query:  MGSLAKKGLNKYLSQLNQHPLRTKVITSGVLVALSDVTSQKLTGIQKLQLKRILLKV----------------------------------VALEQLTAS
        MGSLAKKGL+KYLSQL QHPLRTK+ITSGVL+A++DV SQKL GIQ++QLKRIL+K+                                  V LEQ T+S
Subjt:  MGSLAKKGLNKYLSQLNQHPLRTKVITSGVLVALSDVTSQKLTGIQKLQLKRILLKV----------------------------------VALEQLTAS

Query:  PWNHFVFLVYYGLIIEGRTWVQVKAKVKKEFPSLQLTAWM
        PWNHFVFLVYYGL IE RTWVQVKAKV+KEFPS+QLTAWM
Subjt:  PWNHFVFLVYYGLIIEGRTWVQVKAKVKKEFPSLQLTAWM

TrEMBL top hitse value%identityAlignment
A0A0A0KJV4 Uncharacterized protein5.5e-4474.29Show/hide
Query:  MGSLAKKGLNKYLSQLNQHPLRTKVITSGVLVALSDVTSQKLTGIQKLQLKRILLKV----------------------------------VALEQLTAS
        MGSLAKK LNKYLSQLN HPLRTKVITSGVLVALSDVTSQKLTGIQKLQLKRILLKV                                  VALEQLTAS
Subjt:  MGSLAKKGLNKYLSQLNQHPLRTKVITSGVLVALSDVTSQKLTGIQKLQLKRILLKV----------------------------------VALEQLTAS

Query:  PWNHFVFLVYYGLIIEGRTWVQVKAKVKKEFPSLQLTAWM
        PWNHFVFLVYYGLIIEGRTWVQVKAKVKKEFPSLQLTAWM
Subjt:  PWNHFVFLVYYGLIIEGRTWVQVKAKVKKEFPSLQLTAWM

A0A1S3B0V4 peroxisomal membrane protein PMP222.9e-4575.71Show/hide
Query:  MGSLAKKGLNKYLSQLNQHPLRTKVITSGVLVALSDVTSQKLTGIQKLQLKRILLKV----------------------------------VALEQLTAS
        MGSLAKKGLNKYLSQLNQHPLRTKVITSGVLVALSDVTSQKLTGIQKLQLKRILLKV                                  VALEQLTAS
Subjt:  MGSLAKKGLNKYLSQLNQHPLRTKVITSGVLVALSDVTSQKLTGIQKLQLKRILLKV----------------------------------VALEQLTAS

Query:  PWNHFVFLVYYGLIIEGRTWVQVKAKVKKEFPSLQLTAWM
        PWNHFVFLVYYGLIIEGRTWVQVKAKVKKEFPSLQLTAWM
Subjt:  PWNHFVFLVYYGLIIEGRTWVQVKAKVKKEFPSLQLTAWM

A0A2J6JJJ1 Uncharacterized protein1.6e-3567.96Show/hide
Query:  SLAKKGLNKYLSQLNQHPLRTKVITSGVLVALSDVTSQKLTGIQKLQLKRILLKVVALEQLTASPWNHFVFLVYYGLIIEGRTWVQVKAKVKKEFPSLQL
        S+AKKGL +YL QL QHPLRTK +T+GVL A+SD+ SQKLTGIQKLQ++R+LLKVV LEQ+T+SPWN+ +F++YYGL+IEGR+W+QVK+K+KKE+P++Q 
Subjt:  SLAKKGLNKYLSQLNQHPLRTKVITSGVLVALSDVTSQKLTGIQKLQLKRILLKVVALEQLTASPWNHFVFLVYYGLIIEGRTWVQVKAKVKKEFPSLQL

Query:  TAW
         AW
Subjt:  TAW

A0A5D3CNV5 Peroxisomal membrane protein PMP221.1e-5578.12Show/hide
Query:  MGSLAKKGLNKYLSQLNQHPLRTKVITSGVLVALSDVTSQKLTGIQKLQLKRILLKV----------------------------------VALEQLTAS
        MGSLAKKGLNKYLSQLNQHPLRTKVITSGVLVALSDVTSQKLTGIQKLQLKRILLKV                                  VALEQLTAS
Subjt:  MGSLAKKGLNKYLSQLNQHPLRTKVITSGVLVALSDVTSQKLTGIQKLQLKRILLKV----------------------------------VALEQLTAS

Query:  PWNHFVFLVYYGLIIEGRTWVQVKAKVKKEFPSLQLTAWMGIIFERSSKIRDVEEILVEN
        PWNHFVFLVYYGLIIEGRTWVQVKAKVKKEFPSLQLTAWMGIIFER SKIRDVEEILVEN
Subjt:  PWNHFVFLVYYGLIIEGRTWVQVKAKVKKEFPSLQLTAWMGIIFERSSKIRDVEEILVEN

A0A6J1CLF0 peroxisomal membrane protein PMP222.5e-3661.43Show/hide
Query:  MGSLAKKGLNKYLSQLNQHPLRTKVITSGVLVALSDVTSQKLTGIQKLQLKRILLKV----------------------------------VALEQLTAS
        MGS+AKKGL KY+SQL QHPLRTK+IT+GVL  +SDV SQKLTGIQKLQ KR++LKV                                  V LEQLTAS
Subjt:  MGSLAKKGLNKYLSQLNQHPLRTKVITSGVLVALSDVTSQKLTGIQKLQLKRILLKV----------------------------------VALEQLTAS

Query:  PWNHFVFLVYYGLIIEGRTWVQVKAKVKKEFPSLQLTAWM
        PWNHFVFLVYYGL+IE R WV VKAKVKK+FPS+QLTAWM
Subjt:  PWNHFVFLVYYGLIIEGRTWVQVKAKVKKEFPSLQLTAWM

SwissProt top hitse value%identityAlignment
Q9ZS51 Peroxisomal membrane protein PMP228.5e-2647.01Show/hide
Query:  KKGLNKYLSQLNQHPLRTKVITSGVLVALSDVTSQKLTGIQKLQLKRILLKV----------------------------------VALEQLTASPWNHF
        K  L +YLSQL QHPLRTK IT+GVL  +SDV SQKL+GIQK+QL+R+LLKV                                  V LEQLT SP NH 
Subjt:  KKGLNKYLSQLNQHPLRTKVITSGVLVALSDVTSQKLTGIQKLQLKRILLKV----------------------------------VALEQLTASPWNHF

Query:  VFLVYYGLIIEGRTWVQVKAKVKKEFPSLQLTAW
        +F++YYG++IE   W  V+ ++KK +P++QLTAW
Subjt:  VFLVYYGLIIEGRTWVQVKAKVKKEFPSLQLTAW

Arabidopsis top hitse value%identityAlignment
AT4G04470.1 Peroxisomal membrane 22 kDa (Mpv17/PMP22) family protein6.1e-2747.01Show/hide
Query:  KKGLNKYLSQLNQHPLRTKVITSGVLVALSDVTSQKLTGIQKLQLKRILLKV----------------------------------VALEQLTASPWNHF
        K  L +YLSQL QHPLRTK IT+GVL  +SDV SQKL+GIQK+QL+R+LLKV                                  V LEQLT SP NH 
Subjt:  KKGLNKYLSQLNQHPLRTKVITSGVLVALSDVTSQKLTGIQKLQLKRILLKV----------------------------------VALEQLTASPWNHF

Query:  VFLVYYGLIIEGRTWVQVKAKVKKEFPSLQLTAW
        +F++YYG++IE   W  V+ ++KK +P++QLTAW
Subjt:  VFLVYYGLIIEGRTWVQVKAKVKKEFPSLQLTAW

AT4G14305.1 Peroxisomal membrane 22 kDa (Mpv17/PMP22) family protein2.3e-2643.17Show/hide
Query:  MGSLAKKGLNKYLSQLNQHPLRTKVITSGVLVALSDVTSQKLTGIQKLQLKRILL----------------------------------KVVALEQLTAS
        M  LAK    KYL QL  HPLRTK IT+GVL   SD  +QK++G++++Q +R+LL                                  K V LEQLT+S
Subjt:  MGSLAKKGLNKYLSQLNQHPLRTKVITSGVLVALSDVTSQKLTGIQKLQLKRILL----------------------------------KVVALEQLTAS

Query:  PWNHFVFLVYYGLIIEGRTWVQVKAKVKKEFPSLQLTAW
        PWN+F+F+ YYGL++EGR W  VK K+ K++P++QLTAW
Subjt:  PWNHFVFLVYYGLIIEGRTWVQVKAKVKKEFPSLQLTAW

AT4G14305.2 Peroxisomal membrane 22 kDa (Mpv17/PMP22) family protein4.4e-1738.74Show/hide
Query:  GVLVALSDVTSQKLTGIQKLQLKRILL----------------------------------KVVALEQLTASPWNHFVFLVYYGLIIEGRTWVQVKAKVK
        GVL   SD  +QK++G++++Q +R+LL                                  K V LEQLT+SPWN+F+F+ YYGL++EGR W  VK K+ 
Subjt:  GVLVALSDVTSQKLTGIQKLQLKRILL----------------------------------KVVALEQLTASPWNHFVFLVYYGLIIEGRTWVQVKAKVK

Query:  KEFPSLQLTAW
        K++P++QLTAW
Subjt:  KEFPSLQLTAW


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGTTCTTTAGCCAAGAAGGGTTTAAACAAGTATCTTTCCCAACTTAATCAGCACCCTTTGAGAACCAAGGTAATCACATCTGGAGTATTGGTTGCATTGAGC
GATGTGACTTCCCAGAAGCTTACTGGCATACAGAAACTTCAGTTGAAGCGAATTTTACTCAAAGTGGTGGCGTTGGAACAATTGACAGCCTCTCCTTGGAACCAC
TTTGTCTTCTTGGTTTATTACGGACTGATTATTGAAGGAAGGACTTGGGTCCAGGTAAAGGCTAAGGTGAAAAAGGAATTTCCTTCACTCCAGCTAACTGCTTGG
ATGGGGATTATTTTTGAACGTTCGAGCAAAATCCGTGACGTTGAAGAAATCTTAGTGGAAAACTAG
mRNA sequenceShow/hide mRNA sequence
AATGTGATACTTTTCTTAAAGAAATAAAATGGGATGAGATATAGTAAAGTTGAAAATTGAAATCAAATAACGGGTCCGATTAGGGTTAAAAGCGGAGGAGAGAAT
GGCAATTATTGACCCGGCTTGTCCGTCCACGGAGAATGAGACTTACCCAACTAACCGCGAGCTTGTGGTCAGAAAACGGCGAACCCTCGAGTTCGATACGCAATT
TATGATTGCCAGCAAATTAACGTTCTTCTTTCGAATTTAGTTTTTCACGTTGGGGGTAGTTACTACCTAGCCTTCATTCGCCTCCACGTAGTCACTGTGGTGGCC
CCTTAATATCCAGATATTTTATGAGAAGCGGACAATAAGATTTGATTTCATGAAACATCACAGTGACCAAAACTCAGACTCTTAACTCAATCCTCTTTGCTGTTG
CTTGGAAGAGAAAGAAAGCCATAATGGGTTCTTTAGCCAAGAAGGGTTTAAACAAGTATCTTTCCCAACTTAATCAGCACCCTTTGAGAACCAAGGTAATCACAT
CTGGAGTATTGGTTGCATTGAGCGATGTGACTTCCCAGAAGCTTACTGGCATACAGAAACTTCAGTTGAAGCGAATTTTACTCAAAGTGGTGGCGTTGGAACAAT
TGACAGCCTCTCCTTGGAACCACTTTGTCTTCTTGGTTTATTACGGACTGATTATTGAAGGAAGGACTTGGGTCCAGGTAAAGGCTAAGGTGAAAAAGGAATTTC
CTTCACTCCAGCTAACTGCTTGGATGGGGATTATTTTTGAACGTTCGAGCAAAATCCGTGACGTTGAAGAAATCTTAGTGGAAAACTAGAATACTGCAAAATGTC
CTCTGACTGATGAAATATTATCCTCATTAGTACTTACTACAAACTTTTCTTTAGCTTTCGTGAAAGTAATTGTCCCCAATGCAACTTGATTATTGAACTATATGC
TTCTAGCAATCGTGCTTGAAATGAAATTTTTAAGAACATTGTGATCGATATGATAATCATGTATAATTATCGATCAAAAAAGTGTTAAGATAATAATTTCATGTG
TAAGTAGTCTGTTTTTGCTGATGGTAGAATTTTTAGATATGATAAACATGTCTTTGATGATAGATTAGTTTGGACGCAATAGTATTTCTTATGTGCCATAAAT
Protein sequenceShow/hide protein sequence
MGSLAKKGLNKYLSQLNQHPLRTKVITSGVLVALSDVTSQKLTGIQKLQLKRILLKVVALEQLTASPWNHFVFLVYYGLIIEGRTWVQVKAKVKKEFPSLQLTAW
MGIIFERSSKIRDVEEILVEN