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MELO3C007729 (gene) of Melon (DHL92) v4 genome

Gene IDMELO3C007729
OrganismCucumis melo DHL92 (Melon (DHL92) v4)
Descriptionvegetative cell wall protein gp1-like
Genome locationchr08:4949156..4950085
RNA-Seq ExpressionMELO3C007729
SyntenyMELO3C007729
Gene Ontology termsNA
InterPro domainsIPR044959 - Classical arabinogalactan protein


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0036330.1 hypothetical protein E6C27_scaffold18G001290 [Cucumis melo var. makuwa]4.5e-6999.38Show/hide
Query:  MGFSGVRFVVIFALLTRLCMAQAPVPAPGSPQPLTPPSATPAPSPVVLPPSPTPTPNRAPSPSPTPVSPSPAPYAPSPAPVVPAPAPAPIAPTPTPISTP
        MGFSGVRFVVIFALLTRLCMAQAPVPAPGSPQPLTPPSATPAPSPVVLPPSPTPTPNRAPSPSPTPVSPSPAP APSPAPVVPAPAPAPIAPTPTPISTP
Subjt:  MGFSGVRFVVIFALLTRLCMAQAPVPAPGSPQPLTPPSATPAPSPVVLPPSPTPTPNRAPSPSPTPVSPSPAPYAPSPAPVVPAPAPAPIAPTPTPISTP

Query:  TPSGGPVVPPIASPPSPTGIEVPSPAPQGPPADNPAGAASHIGGAATLGIALAGTLFAVILS
        TPSGGPVVPPIASPPSPTGIEVPSPAPQGPPADNPAGAASHIGGAATLGIALAGTLFAVILS
Subjt:  TPSGGPVVPPIASPPSPTGIEVPSPAPQGPPADNPAGAASHIGGAATLGIALAGTLFAVILS

XP_022950235.1 vegetative cell wall protein gp1-like [Cucurbita moschata]1.1e-3061.45Show/hide
Query:  MGFSGVRFVVIFALLTRLCMAQAPVPAPG----SPQPLTPPSATPAPSPVVLPPSPTPTPNRAPSPSPTPVSPSPAPYAPSPAP---------VVPAPAP
        MG SGVR VVIFAL+  LC AQAP P P     SP+P+ P  ATPAPSPV  PPSP+ +P RAPSPSPT  SPSPA  APSPAP           P P+P
Subjt:  MGFSGVRFVVIFALLTRLCMAQAPVPAPG----SPQPLTPPSATPAPSPVVLPPSPTPTPNRAPSPSPTPVSPSPAPYAPSPAP---------VVPAPAP

Query:  APIAPTPTPISTPTPS----GGPVVPPIASPPSPTGIEVPSPAPQGPPADNPAGAASHIGGAATLGIALAGTLFAVILS
        A  APTP P S P PS    G PVVPPIASPPSP+  + PSP P+ P AD+PAGAASHIGGA TLGIA+AGTL A++++
Subjt:  APIAPTPTPISTPTPS----GGPVVPPIASPPSPTGIEVPSPAPQGPPADNPAGAASHIGGAATLGIALAGTLFAVILS

XP_022978568.1 vegetative cell wall protein gp1-like [Cucurbita maxima]1.5e-3263.43Show/hide
Query:  MGFSGVRFVVIFALLTRLCMAQAPVPAPGSPQPLTPPSATPAPSPVVLPPSPTPTPNRAPSPSPTPVSPSPAPYAPSPAP---------VVPAPAPAPIA
        MGFSGVR VVIFAL+  LC AQAP PA  SP+P+ P  ATPAPSPV  PPSP+ +P RAPSPSPT  SPSPA  APSPAP           P P+PA  A
Subjt:  MGFSGVRFVVIFALLTRLCMAQAPVPAPGSPQPLTPPSATPAPSPVVLPPSPTPTPNRAPSPSPTPVSPSPAPYAPSPAP---------VVPAPAPAPIA

Query:  PTPTPISTPTPS----GGPVVPPIASPPSPTGIEVPSPAPQGPPADNPAGAASHIGGAATLGIALAGTLFAVILS
        PTP P S P PS    G PVVPPIASPPSP+  + PSP P+ P AD+PAGAASHIGGA TLGIA+AGTL A++++
Subjt:  PTPTPISTPTPS----GGPVVPPIASPPSPTGIEVPSPAPQGPPADNPAGAASHIGGAATLGIALAGTLFAVILS

XP_023544207.1 vegetative cell wall protein gp1-like [Cucurbita pepo subsp. pepo]3.4e-3262.57Show/hide
Query:  MGFSGVRFVVIFALLTRLCMAQAPVPAPG----SPQPLTPPSATPAPSPVVLPPSPTPTPNRAPSPSPTPVSPSPAPYAPSPAP---------VVPAPAP
        MGFSGVR VVIFAL+  LCMAQAP P P     SP+P+ P  ATPAPSPV  PP+P+ +P RAPSPSPT  SPSPA  APSPAP           P P+P
Subjt:  MGFSGVRFVVIFALLTRLCMAQAPVPAPG----SPQPLTPPSATPAPSPVVLPPSPTPTPNRAPSPSPTPVSPSPAPYAPSPAP---------VVPAPAP

Query:  APIAPTPTPISTPTPS----GGPVVPPIASPPSPTGIEVPSPAPQGPPADNPAGAASHIGGAATLGIALAGTLFAVILS
        A  APTP P S P PS    G PVVPPIASPPSP+  E PSP P+ P AD+PAGAASHIGGA TLGIA+AGTL A++++
Subjt:  APIAPTPTPISTPTPS----GGPVVPPIASPPSPTGIEVPSPAPQGPPADNPAGAASHIGGAATLGIALAGTLFAVILS

XP_038881138.1 vegetative cell wall protein gp1-like [Benincasa hispida]2.5e-5183.95Show/hide
Query:  MGFSGVRFVVIFALLTRLCMAQAPVPAPGSPQPLTPPSATPAPSPVVLPPSPTPTPNRAPSPSPTPVSPSPAPYAPSPAPVVPAPAPAPIAPTPTPISTP
        MGFSGVR+VVIFALLTRLCMAQAP PAPGS QPL P   TPAPSPVV PPSPTPTPNRAPS SP P SPSPAP APSPAP VPAPAPA  APTP P S+ 
Subjt:  MGFSGVRFVVIFALLTRLCMAQAPVPAPGSPQPLTPPSATPAPSPVVLPPSPTPTPNRAPSPSPTPVSPSPAPYAPSPAPVVPAPAPAPIAPTPTPISTP

Query:  TPSGGPVVPPIASPPSPTGIEVPSPAPQGPPADNPAGAASHIGGAATLGIALAGTLFAVILS
        TPSGGPVVPPIASPPSPTGIEVPS APQ P ADNPAGAASHIGGAA  GIA+AGTLFAVIL+
Subjt:  TPSGGPVVPPIASPPSPTGIEVPSPAPQGPPADNPAGAASHIGGAATLGIALAGTLFAVILS

TrEMBL top hitse value%identityAlignment
A0A0A0KG74 Uncharacterized protein4.1e-6090.12Show/hide
Query:  MGFSGVRFVVIFALLTRLCMAQAPVPAPGSPQPLTPPSATPAPSPVVLPPSPTPTPNRAPSPSPTPVSPSPAPYAPSPAPVVPAPAPAPIAPTPTPISTP
        MGFSGVRFV+IFALLTRLCMAQAP PAPGSPQPLTPPSATPAPSPVVLPPSPTPTPNRAPSPSPTPVSPSPAP A S       PAPAPIAPTPTPISTP
Subjt:  MGFSGVRFVVIFALLTRLCMAQAPVPAPGSPQPLTPPSATPAPSPVVLPPSPTPTPNRAPSPSPTPVSPSPAPYAPSPAPVVPAPAPAPIAPTPTPISTP

Query:  TPSGGPVVPPIASPPSPTGIEVPSPAPQGPPADNPAGAASHIGGAATLGIALAGTLFAVILS
        TPSGGPV+PPIASPPSPTG+EVPSPAPQGP ADNPAGA SHIGGAATLGIALAGTLF VILS
Subjt:  TPSGGPVVPPIASPPSPTGIEVPSPAPQGPPADNPAGAASHIGGAATLGIALAGTLFAVILS

A0A5D3CNQ6 Uncharacterized protein2.2e-6999.38Show/hide
Query:  MGFSGVRFVVIFALLTRLCMAQAPVPAPGSPQPLTPPSATPAPSPVVLPPSPTPTPNRAPSPSPTPVSPSPAPYAPSPAPVVPAPAPAPIAPTPTPISTP
        MGFSGVRFVVIFALLTRLCMAQAPVPAPGSPQPLTPPSATPAPSPVVLPPSPTPTPNRAPSPSPTPVSPSPAP APSPAPVVPAPAPAPIAPTPTPISTP
Subjt:  MGFSGVRFVVIFALLTRLCMAQAPVPAPGSPQPLTPPSATPAPSPVVLPPSPTPTPNRAPSPSPTPVSPSPAPYAPSPAPVVPAPAPAPIAPTPTPISTP

Query:  TPSGGPVVPPIASPPSPTGIEVPSPAPQGPPADNPAGAASHIGGAATLGIALAGTLFAVILS
        TPSGGPVVPPIASPPSPTGIEVPSPAPQGPPADNPAGAASHIGGAATLGIALAGTLFAVILS
Subjt:  TPSGGPVVPPIASPPSPTGIEVPSPAPQGPPADNPAGAASHIGGAATLGIALAGTLFAVILS

A0A6J1GF55 vegetative cell wall protein gp1-like5.3e-3161.45Show/hide
Query:  MGFSGVRFVVIFALLTRLCMAQAPVPAPG----SPQPLTPPSATPAPSPVVLPPSPTPTPNRAPSPSPTPVSPSPAPYAPSPAP---------VVPAPAP
        MG SGVR VVIFAL+  LC AQAP P P     SP+P+ P  ATPAPSPV  PPSP+ +P RAPSPSPT  SPSPA  APSPAP           P P+P
Subjt:  MGFSGVRFVVIFALLTRLCMAQAPVPAPG----SPQPLTPPSATPAPSPVVLPPSPTPTPNRAPSPSPTPVSPSPAPYAPSPAP---------VVPAPAP

Query:  APIAPTPTPISTPTPS----GGPVVPPIASPPSPTGIEVPSPAPQGPPADNPAGAASHIGGAATLGIALAGTLFAVILS
        A  APTP P S P PS    G PVVPPIASPPSP+  + PSP P+ P AD+PAGAASHIGGA TLGIA+AGTL A++++
Subjt:  APIAPTPTPISTPTPS----GGPVVPPIASPPSPTGIEVPSPAPQGPPADNPAGAASHIGGAATLGIALAGTLFAVILS

A0A6J1ITI1 vegetative cell wall protein gp1-like7.4e-3363.43Show/hide
Query:  MGFSGVRFVVIFALLTRLCMAQAPVPAPGSPQPLTPPSATPAPSPVVLPPSPTPTPNRAPSPSPTPVSPSPAPYAPSPAP---------VVPAPAPAPIA
        MGFSGVR VVIFAL+  LC AQAP PA  SP+P+ P  ATPAPSPV  PPSP+ +P RAPSPSPT  SPSPA  APSPAP           P P+PA  A
Subjt:  MGFSGVRFVVIFALLTRLCMAQAPVPAPGSPQPLTPPSATPAPSPVVLPPSPTPTPNRAPSPSPTPVSPSPAPYAPSPAP---------VVPAPAPAPIA

Query:  PTPTPISTPTPS----GGPVVPPIASPPSPTGIEVPSPAPQGPPADNPAGAASHIGGAATLGIALAGTLFAVILS
        PTP P S P PS    G PVVPPIASPPSP+  + PSP P+ P AD+PAGAASHIGGA TLGIA+AGTL A++++
Subjt:  PTPTPISTPTPS----GGPVVPPIASPPSPTGIEVPSPAPQGPPADNPAGAASHIGGAATLGIALAGTLFAVILS

A0A6J1KP28 classical arabinogalactan protein 4-like3.7e-1646.91Show/hide
Query:  MGFSGVRFVVIFALLTRLCMAQAPVPAPGSPQPLTPPSATPAPSPVVLPPSPTPTPNRAPSPSPTPVSPSPAPYAPSPAPVVPAPAPAPIAPTPTPISTP
        MGFSGVRF+++ ALL   CMAQAP P P                     P+PT  P++   P+P   +PS +P +P+PAP    P PAPI P      + 
Subjt:  MGFSGVRFVVIFALLTRLCMAQAPVPAPGSPQPLTPPSATPAPSPVVLPPSPTPTPNRAPSPSPTPVSPSPAPYAPSPAPVVPAPAPAPIAPTPTPISTP

Query:  TPSGGPVVPPIASPPSPTGIEVPSPAPQGPPADNPAGAASHIGGAATLGIALAGTLFAVILS
        +P+GGPVVP +ASP        PS AP+GPPADNP GAAS IG A TLG+A+AG+L AV+L+
Subjt:  TPSGGPVVPPIASPPSPTGIEVPSPAPQGPPADNPAGAASHIGGAATLGIALAGTLFAVILS

SwissProt top hitse value%identityAlignment
O10341 Uncharacterized 29.3 kDa protein4.8e-0547.46Show/hide
Query:  APVPAPGSPQPLTPPSATPAPSPV-VLPPSPTPTPNRAPSPSPTPV-SPSPAPYAPSPAPVVPAPAPAPI-APTPTPISTPTPSGGPVVPPIASP-PSPT
        +P P P +P P   P+ TP+P+P   L P+PTP+P  +P+PSPTP  SP+P+P  PSP P  P+P P+P   P+PTP  TPTPS  P   P  SP PSPT
Subjt:  APVPAPGSPQPLTPPSATPAPSPV-VLPPSPTPTPNRAPSPSPTPV-SPSPAPYAPSPAPVVPAPAPAPI-APTPTPISTPTPSGGPVVPPIASP-PSPT

Query:  GIEVPSPAPQGPPADNPA
            P+P+P   P+  P+
Subjt:  GIEVPSPAPQGPPADNPA

Q9FM99 Alpha carbonic anhydrase 83.1e-0439.42Show/hide
Query:  MGFSGVRFVVIFALLTRLCMAQAPVPAPGSPQPLTPPSATPAPSPVVLPPSPTPTPNR-APSPSPTPVSPSPAPYAPSPAPVVPAPAPAPIAPTPTPIST
        M  S + +V++   ++   ++ AP P P  P+P       PAP+P    P+P PTP +  P P+PTP  P PAP AP+P    PAPAP P  P P P  T
Subjt:  MGFSGVRFVVIFALLTRLCMAQAPVPAPGSPQPLTPPSATPAPSPVVLPPSPTPTPNR-APSPSPTPVSPSPAPYAPSPAPVVPAPAPAPIAPTPTPIST

Query:  PTPSGGPVVPPIASPPSPTGIEVPSPAPQGPPADNPA
        P P+  P   P    P P     P+PAP+  PA  PA
Subjt:  PTPSGGPVVPPIASPPSPTGIEVPSPAPQGPPADNPA

Q9FPQ6 Vegetative cell wall protein gp15.7e-0652.38Show/hide
Query:  PVPAPGSPQPLTPPS-ATPAPSPVVLPPSPTPTPNRAP--SPSPTPVSPSPAPYAPSPAPVVPAPAPAPIAPT------PTPISTPTPSGGPVVPPIASP
        P PAP SP P +PPS A P+PSP   PPSP+P P+ AP   PSP P SPSP P  PSP+P VP P+PAP +PT      P P S   PS  P VPP  +P
Subjt:  PVPAPGSPQPLTPPS-ATPAPSPVVLPPSPTPTPNRAP--SPSPTPVSPSPAPYAPSPAPVVPAPAPAPIAPT------PTPISTPTPSGGPVVPPIASP

Query:  PSPTGIEVPSPAPQGPPADNPAGAAS
        PSP     PSPAP  PP+  P    S
Subjt:  PSPTGIEVPSPAPQGPPADNPAGAAS

Arabidopsis top hitse value%identityAlignment
AT5G56330.1 alpha carbonic anhydrase 82.2e-0539.42Show/hide
Query:  MGFSGVRFVVIFALLTRLCMAQAPVPAPGSPQPLTPPSATPAPSPVVLPPSPTPTPNR-APSPSPTPVSPSPAPYAPSPAPVVPAPAPAPIAPTPTPIST
        M  S + +V++   ++   ++ AP P P  P+P       PAP+P    P+P PTP +  P P+PTP  P PAP AP+P    PAPAP P  P P P  T
Subjt:  MGFSGVRFVVIFALLTRLCMAQAPVPAPGSPQPLTPPSATPAPSPVVLPPSPTPTPNR-APSPSPTPVSPSPAPYAPSPAPVVPAPAPAPIAPTPTPIST

Query:  PTPSGGPVVPPIASPPSPTGIEVPSPAPQGPPADNPA
        P P+  P   P    P P     P+PAP+  PA  PA
Subjt:  PTPSGGPVVPPIASPPSPTGIEVPSPAPQGPPADNPA


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGATTCTCCGGGGTTCGATTCGTTGTGATTTTTGCTTTGTTGACGAGGTTATGTATGGCTCAGGCGCCTGTGCCGGCACCGGGTTCTCCACAGCCTCTAACTCCTCC
ATCAGCCACACCGGCGCCTTCTCCGGTCGTTCTCCCTCCATCTCCAACTCCAACACCAAACAGAGCACCATCGCCTTCACCGACTCCGGTATCGCCTTCACCCGCTCCGT
ATGCTCCGTCACCCGCACCAGTGGTACCTGCTCCAGCTCCGGCGCCTATTGCTCCTACCCCAACTCCAATCTCTACTCCTACTCCTTCCGGTGGTCCTGTTGTTCCACCC
ATTGCTTCTCCTCCTTCACCCACCGGAATCGAGGTGCCTTCACCAGCACCCCAAGGCCCGCCGGCCGATAACCCAGCTGGAGCGGCGTCGCACATCGGCGGAGCAGCGAC
GTTGGGGATCGCTTTGGCTGGTACTCTGTTTGCAGTGATTTTATCGTAG
mRNA sequenceShow/hide mRNA sequence
CAAAGCAAAACAAGCAAAGTGAATTCTGTGAGCGAATTGTTCCTTTCTAAACCGCATCGTTTGGCTCTTCCACTCTCACTACCTTCTCCGAGATACTCTGTTTTGAGCAA
AACAAATCTTCTTTTCCCTTTTTCTTCCCGATAAAGACGATGGGATTCTCCGGGGTTCGATTCGTTGTGATTTTTGCTTTGTTGACGAGGTTATGTATGGCTCAGGCGCC
TGTGCCGGCACCGGGTTCTCCACAGCCTCTAACTCCTCCATCAGCCACACCGGCGCCTTCTCCGGTCGTTCTCCCTCCATCTCCAACTCCAACACCAAACAGAGCACCAT
CGCCTTCACCGACTCCGGTATCGCCTTCACCCGCTCCGTATGCTCCGTCACCCGCACCAGTGGTACCTGCTCCAGCTCCGGCGCCTATTGCTCCTACCCCAACTCCAATC
TCTACTCCTACTCCTTCCGGTGGTCCTGTTGTTCCACCCATTGCTTCTCCTCCTTCACCCACCGGAATCGAGGTGCCTTCACCAGCACCCCAAGGCCCGCCGGCCGATAA
CCCAGCTGGAGCGGCGTCGCACATCGGCGGAGCAGCGACGTTGGGGATCGCTTTGGCTGGTACTCTGTTTGCAGTGATTTTATCGTAGACGTTGATGCGTTGGGTCAACT
TAGAGATCTAAATTTGGAGGTGAATTGGAGTGATGGCTGAAGGAATTCTTTTGCTTTTTTTGTTTTTTGAAAAAAAATCTCTTTCCTACACTACTACTGCCTTCACATAA
TTTCATTGTTATTATTATTATTTTGATGTTTCAGATTTTAGGGAGTTGGGTTTTGTAATTTCGATAGGTTTGGTTACTTTTTAGTATTCATTGTTCTTCTGTTGATTATA
TTTGAATTCTTTGTAGATCGGATCAGTGATGAATAAGAGTTTTTTCTTTT
Protein sequenceShow/hide protein sequence
MGFSGVRFVVIFALLTRLCMAQAPVPAPGSPQPLTPPSATPAPSPVVLPPSPTPTPNRAPSPSPTPVSPSPAPYAPSPAPVVPAPAPAPIAPTPTPISTPTPSGGPVVPP
IASPPSPTGIEVPSPAPQGPPADNPAGAASHIGGAATLGIALAGTLFAVILS