; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

MELO3C007729.jh1 (gene) of Melon (Harukei-3) v1.41 genome

Gene IDMELO3C007729.jh1
OrganismCucumis melo var. reticulatus cv. Harukei-3 (Melon (Harukei-3) v1.41)
Descriptionvegetative cell wall protein gp1-like
Genome locationchr08:4901420..4902424
RNA-Seq ExpressionMELO3C007729.jh1
SyntenyMELO3C007729.jh1
Gene Ontology termsNA
InterPro domainsIPR044959 - Classical arabinogalactan protein


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0036330.1 hypothetical protein E6C27_scaffold18G001290 [Cucumis melo var. makuwa]1.50e-9199.38Show/hide
Query:  MGFSGVRFVVIFALLTRLCMAQAPVPAPGSPQPLTPPSATPAPSPVVLPPSPTPTPNRAPSPSPTPVSPSPAPYAPSPAPVVPAPAPAPIAPTPTPISTP
        MGFSGVRFVVIFALLTRLCMAQAPVPAPGSPQPLTPPSATPAPSPVVLPPSPTPTPNRAPSPSPTPVSPSPAP APSPAPVVPAPAPAPIAPTPTPISTP
Subjt:  MGFSGVRFVVIFALLTRLCMAQAPVPAPGSPQPLTPPSATPAPSPVVLPPSPTPTPNRAPSPSPTPVSPSPAPYAPSPAPVVPAPAPAPIAPTPTPISTP

Query:  TPSGGPVVPPIASPPSPTGIEVPSPAPQGPPADNPAGAASHIGGAATLGIALAGTLFAVILS
        TPSGGPVVPPIASPPSPTGIEVPSPAPQGPPADNPAGAASHIGGAATLGIALAGTLFAVILS
Subjt:  TPSGGPVVPPIASPPSPTGIEVPSPAPQGPPADNPAGAASHIGGAATLGIALAGTLFAVILS

XP_022950235.1 vegetative cell wall protein gp1-like [Cucurbita moschata]5.21e-4161.45Show/hide
Query:  MGFSGVRFVVIFALLTRLCMAQAPVPAPG----SPQPLTPPSATPAPSPVVLPPSPTPTPNRAPSPSPTPVSPSPAPYAPSPAPVV---------PAPAP
        MG SGVR VVIFAL+  LC AQAP P P     SP+P+ P  ATPAPSPV  PPSP+ +P RAPSPSPT  SPSPA  APSPAP           P P+P
Subjt:  MGFSGVRFVVIFALLTRLCMAQAPVPAPG----SPQPLTPPSATPAPSPVVLPPSPTPTPNRAPSPSPTPVSPSPAPYAPSPAPVV---------PAPAP

Query:  APIAPTPTPISTPTPSGGP----VVPPIASPPSPTGIEVPSPAPQGPPADNPAGAASHIGGAATLGIALAGTLFAVILS
        A  APTP P S P PSG P    VVPPIASPPSP+  + PSP P+ P AD+PAGAASHIGGA TLGIA+AGTL A++++
Subjt:  APIAPTPTPISTPTPSGGP----VVPPIASPPSPTGIEVPSPAPQGPPADNPAGAASHIGGAATLGIALAGTLFAVILS

XP_022978568.1 vegetative cell wall protein gp1-like [Cucurbita maxima]1.75e-4363.43Show/hide
Query:  MGFSGVRFVVIFALLTRLCMAQAPVPAPGSPQPLTPPSATPAPSPVVLPPSPTPTPNRAPSPSPTPVSPSPAPYAPSPAPVV---------PAPAPAPIA
        MGFSGVR VVIFAL+  LC AQAP PA  SP+P+ P  ATPAPSPV  PPSP+ +P RAPSPSPT  SPSPA  APSPAP           P P+PA  A
Subjt:  MGFSGVRFVVIFALLTRLCMAQAPVPAPGSPQPLTPPSATPAPSPVVLPPSPTPTPNRAPSPSPTPVSPSPAPYAPSPAPVV---------PAPAPAPIA

Query:  PTPTPISTPTPSGGP----VVPPIASPPSPTGIEVPSPAPQGPPADNPAGAASHIGGAATLGIALAGTLFAVILS
        PTP P S P PSG P    VVPPIASPPSP+  + PSP P+ P AD+PAGAASHIGGA TLGIA+AGTL A++++
Subjt:  PTPTPISTPTPSGGP----VVPPIASPPSPTGIEVPSPAPQGPPADNPAGAASHIGGAATLGIALAGTLFAVILS

XP_023544207.1 vegetative cell wall protein gp1-like [Cucurbita pepo subsp. pepo]5.61e-4362.57Show/hide
Query:  MGFSGVRFVVIFALLTRLCMAQAPVPAPG----SPQPLTPPSATPAPSPVVLPPSPTPTPNRAPSPSPTPVSPSPAPYAPSPAPVV---------PAPAP
        MGFSGVR VVIFAL+  LCMAQAP P P     SP+P+ P  ATPAPSPV  PP+P+ +P RAPSPSPT  SPSPA  APSPAP           P P+P
Subjt:  MGFSGVRFVVIFALLTRLCMAQAPVPAPG----SPQPLTPPSATPAPSPVVLPPSPTPTPNRAPSPSPTPVSPSPAPYAPSPAPVV---------PAPAP

Query:  APIAPTPTPISTPTPSGGP----VVPPIASPPSPTGIEVPSPAPQGPPADNPAGAASHIGGAATLGIALAGTLFAVILS
        A  APTP P S P PSG P    VVPPIASPPSP+  E PSP P+ P AD+PAGAASHIGGA TLGIA+AGTL A++++
Subjt:  APIAPTPTPISTPTPSGGP----VVPPIASPPSPTGIEVPSPAPQGPPADNPAGAASHIGGAATLGIALAGTLFAVILS

XP_038881138.1 vegetative cell wall protein gp1-like [Benincasa hispida]2.92e-6883.95Show/hide
Query:  MGFSGVRFVVIFALLTRLCMAQAPVPAPGSPQPLTPPSATPAPSPVVLPPSPTPTPNRAPSPSPTPVSPSPAPYAPSPAPVVPAPAPAPIAPTPTPISTP
        MGFSGVR+VVIFALLTRLCMAQAP PAPGS QPL P   TPAPSPVV PPSPTPTPNRAPS SP P SPSPAP APSPAP VPAPAPA  APTP P S+ 
Subjt:  MGFSGVRFVVIFALLTRLCMAQAPVPAPGSPQPLTPPSATPAPSPVVLPPSPTPTPNRAPSPSPTPVSPSPAPYAPSPAPVVPAPAPAPIAPTPTPISTP

Query:  TPSGGPVVPPIASPPSPTGIEVPSPAPQGPPADNPAGAASHIGGAATLGIALAGTLFAVILS
        TPSGGPVVPPIASPPSPTGIEVPS APQ P ADNPAGAASHIGGAA  GIA+AGTLFAVIL+
Subjt:  TPSGGPVVPPIASPPSPTGIEVPSPAPQGPPADNPAGAASHIGGAATLGIALAGTLFAVILS

TrEMBL top hitse value%identityAlignment
A0A0A0KG74 Uncharacterized protein8.87e-8090.12Show/hide
Query:  MGFSGVRFVVIFALLTRLCMAQAPVPAPGSPQPLTPPSATPAPSPVVLPPSPTPTPNRAPSPSPTPVSPSPAPYAPSPAPVVPAPAPAPIAPTPTPISTP
        MGFSGVRFV+IFALLTRLCMAQAP PAPGSPQPLTPPSATPAPSPVVLPPSPTPTPNRAPSPSPTPVSPSPAP A SPA       PAPIAPTPTPISTP
Subjt:  MGFSGVRFVVIFALLTRLCMAQAPVPAPGSPQPLTPPSATPAPSPVVLPPSPTPTPNRAPSPSPTPVSPSPAPYAPSPAPVVPAPAPAPIAPTPTPISTP

Query:  TPSGGPVVPPIASPPSPTGIEVPSPAPQGPPADNPAGAASHIGGAATLGIALAGTLFAVILS
        TPSGGPV+PPIASPPSPTG+EVPSPAPQGP ADNPAGA SHIGGAATLGIALAGTLF VILS
Subjt:  TPSGGPVVPPIASPPSPTGIEVPSPAPQGPPADNPAGAASHIGGAATLGIALAGTLFAVILS

A0A5D3CNQ6 Uncharacterized protein7.24e-9299.38Show/hide
Query:  MGFSGVRFVVIFALLTRLCMAQAPVPAPGSPQPLTPPSATPAPSPVVLPPSPTPTPNRAPSPSPTPVSPSPAPYAPSPAPVVPAPAPAPIAPTPTPISTP
        MGFSGVRFVVIFALLTRLCMAQAPVPAPGSPQPLTPPSATPAPSPVVLPPSPTPTPNRAPSPSPTPVSPSPAP APSPAPVVPAPAPAPIAPTPTPISTP
Subjt:  MGFSGVRFVVIFALLTRLCMAQAPVPAPGSPQPLTPPSATPAPSPVVLPPSPTPTPNRAPSPSPTPVSPSPAPYAPSPAPVVPAPAPAPIAPTPTPISTP

Query:  TPSGGPVVPPIASPPSPTGIEVPSPAPQGPPADNPAGAASHIGGAATLGIALAGTLFAVILS
        TPSGGPVVPPIASPPSPTGIEVPSPAPQGPPADNPAGAASHIGGAATLGIALAGTLFAVILS
Subjt:  TPSGGPVVPPIASPPSPTGIEVPSPAPQGPPADNPAGAASHIGGAATLGIALAGTLFAVILS

A0A6J1GF55 vegetative cell wall protein gp1-like2.52e-4161.45Show/hide
Query:  MGFSGVRFVVIFALLTRLCMAQAPVPAPG----SPQPLTPPSATPAPSPVVLPPSPTPTPNRAPSPSPTPVSPSPAPYAPSPAPVV---------PAPAP
        MG SGVR VVIFAL+  LC AQAP P P     SP+P+ P  ATPAPSPV  PPSP+ +P RAPSPSPT  SPSPA  APSPAP           P P+P
Subjt:  MGFSGVRFVVIFALLTRLCMAQAPVPAPG----SPQPLTPPSATPAPSPVVLPPSPTPTPNRAPSPSPTPVSPSPAPYAPSPAPVV---------PAPAP

Query:  APIAPTPTPISTPTPSGGP----VVPPIASPPSPTGIEVPSPAPQGPPADNPAGAASHIGGAATLGIALAGTLFAVILS
        A  APTP P S P PSG P    VVPPIASPPSP+  + PSP P+ P AD+PAGAASHIGGA TLGIA+AGTL A++++
Subjt:  APIAPTPTPISTPTPSGGP----VVPPIASPPSPTGIEVPSPAPQGPPADNPAGAASHIGGAATLGIALAGTLFAVILS

A0A6J1ITI1 vegetative cell wall protein gp1-like8.45e-4463.43Show/hide
Query:  MGFSGVRFVVIFALLTRLCMAQAPVPAPGSPQPLTPPSATPAPSPVVLPPSPTPTPNRAPSPSPTPVSPSPAPYAPSPAPVV---------PAPAPAPIA
        MGFSGVR VVIFAL+  LC AQAP PA  SP+P+ P  ATPAPSPV  PPSP+ +P RAPSPSPT  SPSPA  APSPAP           P P+PA  A
Subjt:  MGFSGVRFVVIFALLTRLCMAQAPVPAPGSPQPLTPPSATPAPSPVVLPPSPTPTPNRAPSPSPTPVSPSPAPYAPSPAPVV---------PAPAPAPIA

Query:  PTPTPISTPTPSGGP----VVPPIASPPSPTGIEVPSPAPQGPPADNPAGAASHIGGAATLGIALAGTLFAVILS
        PTP P S P PSG P    VVPPIASPPSP+  + PSP P+ P AD+PAGAASHIGGA TLGIA+AGTL A++++
Subjt:  PTPTPISTPTPSGGP----VVPPIASPPSPTGIEVPSPAPQGPPADNPAGAASHIGGAATLGIALAGTLFAVILS

A0A6J1KP28 classical arabinogalactan protein 4-like6.75e-2347.02Show/hide
Query:  MGFSGVRFVVIFALLTRLCMAQAPVPAP------GSPQPLTPPSATPAPSPVVLPPSPTPTPNRAPSPSPTPVSPSPAPYAPSPAPVVPAPAPAPIAPTP
        MGFSGVRF+++ ALL   CMAQAP P P      G  QPL P  ATPAPS    P SPTP P  + +P+P P++PS                        
Subjt:  MGFSGVRFVVIFALLTRLCMAQAPVPAP------GSPQPLTPPSATPAPSPVVLPPSPTPTPNRAPSPSPTPVSPSPAPYAPSPAPVVPAPAPAPIAPTP

Query:  TPISTPTPSGGPVVPPIASPPSPTGIEVPSPAPQGPPADNPAGAASHIGGAATLGIALAGTLFAVILS
              +P+GGPVVP +ASP        PS AP+GPPADNP GAAS IG A TLG+A+AG+L AV+L+
Subjt:  TPISTPTPSGGPVVPPIASPPSPTGIEVPSPAPQGPPADNPAGAASHIGGAATLGIALAGTLFAVILS

SwissProt top hitse value%identityAlignment
O10341 Uncharacterized 29.3 kDa protein4.8e-0547.46Show/hide
Query:  APVPAPGSPQPLTPPSATPAPSPV-VLPPSPTPTPNRAPSPSPTPV-SPSPAPYAPSPAPVVPAPAPAPI-APTPTPISTPTPSGGPVVPPIASP-PSPT
        +P P P +P P   P+ TP+P+P   L P+PTP+P  +P+PSPTP  SP+P+P  PSP P  P+P P+P   P+PTP  TPTPS  P   P  SP PSPT
Subjt:  APVPAPGSPQPLTPPSATPAPSPV-VLPPSPTPTPNRAPSPSPTPV-SPSPAPYAPSPAPVVPAPAPAPI-APTPTPISTPTPSGGPVVPPIASP-PSPT

Query:  GIEVPSPAPQGPPADNPA
            P+P+P   P+  P+
Subjt:  GIEVPSPAPQGPPADNPA

Q9FM99 Alpha carbonic anhydrase 83.1e-0439.42Show/hide
Query:  MGFSGVRFVVIFALLTRLCMAQAPVPAPGSPQPLTPPSATPAPSPVVLPPSPTPTPNR-APSPSPTPVSPSPAPYAPSPAPVVPAPAPAPIAPTPTPIST
        M  S + +V++   ++   ++ AP P P  P+P       PAP+P    P+P PTP +  P P+PTP  P PAP AP+P    PAPAP P  P P P  T
Subjt:  MGFSGVRFVVIFALLTRLCMAQAPVPAPGSPQPLTPPSATPAPSPVVLPPSPTPTPNR-APSPSPTPVSPSPAPYAPSPAPVVPAPAPAPIAPTPTPIST

Query:  PTPSGGPVVPPIASPPSPTGIEVPSPAPQGPPADNPA
        P P+  P   P    P P     P+PAP+  PA  PA
Subjt:  PTPSGGPVVPPIASPPSPTGIEVPSPAPQGPPADNPA

Q9FPQ6 Vegetative cell wall protein gp15.7e-0652.38Show/hide
Query:  PVPAPGSPQPLTPPS-ATPAPSPVVLPPSPTPTPNRAP--SPSPTPVSPSPAPYAPSPAPVVPAPAPAPIAPT------PTPISTPTPSGGPVVPPIASP
        P PAP SP P +PPS A P+PSP   PPSP+P P+ AP   PSP P SPSP P  PSP+P VP P+PAP +PT      P P S   PS  P VPP  +P
Subjt:  PVPAPGSPQPLTPPS-ATPAPSPVVLPPSPTPTPNRAP--SPSPTPVSPSPAPYAPSPAPVVPAPAPAPIAPT------PTPISTPTPSGGPVVPPIASP

Query:  PSPTGIEVPSPAPQGPPADNPAGAAS
        PSP     PSPAP  PP+  P    S
Subjt:  PSPTGIEVPSPAPQGPPADNPAGAAS

Arabidopsis top hitse value%identityAlignment
AT5G56330.1 alpha carbonic anhydrase 82.2e-0539.42Show/hide
Query:  MGFSGVRFVVIFALLTRLCMAQAPVPAPGSPQPLTPPSATPAPSPVVLPPSPTPTPNR-APSPSPTPVSPSPAPYAPSPAPVVPAPAPAPIAPTPTPIST
        M  S + +V++   ++   ++ AP P P  P+P       PAP+P    P+P PTP +  P P+PTP  P PAP AP+P    PAPAP P  P P P  T
Subjt:  MGFSGVRFVVIFALLTRLCMAQAPVPAPGSPQPLTPPSATPAPSPVVLPPSPTPTPNR-APSPSPTPVSPSPAPYAPSPAPVVPAPAPAPIAPTPTPIST

Query:  PTPSGGPVVPPIASPPSPTGIEVPSPAPQGPPADNPA
        P P+  P   P    P P     P+PAP+  PA  PA
Subjt:  PTPSGGPVVPPIASPPSPTGIEVPSPAPQGPPADNPA


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGATTCTCCGGGGTTCGATTCGTTGTGATTTTTGCTTTGTTGACGAGGTTATGTATGGCTCAGGCGCCTGTGCCGGCACCGGGTTCTCCACAGCCTCTAACTCCTCC
ATCAGCCACACCGGCGCCTTCTCCGGTCGTTCTCCCTCCATCTCCAACTCCAACACCAAACAGAGCACCATCGCCTTCACCGACTCCGGTATCGCCTTCACCCGCTCCGT
ATGCTCCGTCACCCGCACCAGTGGTACCTGCTCCAGCTCCGGCGCCTATTGCTCCTACCCCAACTCCAATCTCTACTCCTACTCCTTCCGGTGGTCCTGTTGTTCCACCC
ATTGCTTCTCCTCCTTCACCCACCGGAATCGAGGTGCCTTCACCAGCACCCCAAGGCCCGCCGGCCGATAACCCAGCTGGAGCGGCGTCGCACATCGGCGGAGCAGCGAC
GTTGGGGATCGCTTTGGCTGGTACTCTGTTTGCAGTGATTTTATCGTAG
mRNA sequenceShow/hide mRNA sequence
AGCAAAGTGAATTCTGTGAGCGAATTGTTCCTTTCTAAACCGCATCGTTTGGCTCTTCCACTCTCACTACCTTCTCCGAGATACTCTGTTTTGAGCAAAACAAATCTTCT
TTTCCCTTTTTCTTCCCGATAAAGACGATGGGATTCTCCGGGGTTCGATTCGTTGTGATTTTTGCTTTGTTGACGAGGTTATGTATGGCTCAGGCGCCTGTGCCGGCACC
GGGTTCTCCACAGCCTCTAACTCCTCCATCAGCCACACCGGCGCCTTCTCCGGTCGTTCTCCCTCCATCTCCAACTCCAACACCAAACAGAGCACCATCGCCTTCACCGA
CTCCGGTATCGCCTTCACCCGCTCCGTATGCTCCGTCACCCGCACCAGTGGTACCTGCTCCAGCTCCGGCGCCTATTGCTCCTACCCCAACTCCAATCTCTACTCCTACT
CCTTCCGGTGGTCCTGTTGTTCCACCCATTGCTTCTCCTCCTTCACCCACCGGAATCGAGGTGCCTTCACCAGCACCCCAAGGCCCGCCGGCCGATAACCCAGCTGGAGC
GGCGTCGCACATCGGCGGAGCAGCGACGTTGGGGATCGCTTTGGCTGGTACTCTGTTTGCAGTGATTTTATCGTAGACGTTGATGCGTTGGGTCAACTTAGAGATCTAAA
TTTGGAGGTGAATTGGAGTGATGGCTGAAGGAATTCTTTTGCTTTTTTTGTTTTTTGAAAAAAAATCTCTTTCCTACACTACTACTGCCTTCACATAATTTCATTGTTAT
TATTATTATTTTGATGTTTCAGATTTTAGGGAGTTGGGTTTTGTAATTTCGATAGGTTTGGTTACTTTTTAGTATTCATTGTTCTTCTGTTGATTATATTTGAATTCTTT
GTAGATCGGATCAGTGATGAATAAGAGTTTTTTCTTTTCTTATATATATGTTTGAAATCTTAGTCTCTTTGTTCAGTGTGGTTGTAAAGAGAAGTGAATTATGAGATACG
TTTTCAATCGATTTC
Protein sequenceShow/hide protein sequence
MGFSGVRFVVIFALLTRLCMAQAPVPAPGSPQPLTPPSATPAPSPVVLPPSPTPTPNRAPSPSPTPVSPSPAPYAPSPAPVVPAPAPAPIAPTPTPISTPTPSGGPVVPP
IASPPSPTGIEVPSPAPQGPPADNPAGAASHIGGAATLGIALAGTLFAVILS