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MELO3C007740 (gene) of Melon (DHL92) v4 genome

Gene IDMELO3C007740
OrganismCucumis melo DHL92 (Melon (DHL92) v4)
Description40S ribosomal protein S6
Genome locationchr08:5036947..5037611
RNA-Seq ExpressionMELO3C007740
SyntenyMELO3C007740
Gene Ontology termsGO:0006412 - translation (biological process)
GO:0005737 - cytoplasm (cellular component)
GO:0005840 - ribosome (cellular component)
GO:0016021 - integral component of membrane (cellular component)
GO:0003735 - structural constituent of ribosome (molecular function)
InterPro domainsIPR001377 - Ribosomal protein S6e


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0036319.1 40S ribosomal protein S6 [Cucumis melo var. makuwa]5.8e-5091.34Show/hide
Query:  MRGPKRPSKIRKLFNLSKDDDVRKYVNTYSKTFTDKL-----------GKKCSKAPKIQRLVTPWTLQRKRGRISEKKRRIAKAKSEAAEYQKILASCLK
        MRGPKRPSKIRKLFNLSKDDDVRKYVNTYSKTFTDKL           GKKCSKAPKIQRLVTPWTLQRKRGRISEKKRRIAKAKSEAAEYQKILASCLK
Subjt:  MRGPKRPSKIRKLFNLSKDDDVRKYVNTYSKTFTDKL-----------GKKCSKAPKIQRLVTPWTLQRKRGRISEKKRRIAKAKSEAAEYQKILASCLK

Query:  EQPERRSESLAKRRSKLSAASKPSIAA
        EQPERRSESLAKRRSKLSAASKPSIAA
Subjt:  EQPERRSESLAKRRSKLSAASKPSIAA

KAG0492446.1 hypothetical protein HPP92_005844 [Vanilla planifolia]2.3e-4388.7Show/hide
Query:  MRGPKRPSKIRKLFNLSKDDDVRKYVNTYSKTFTDKLGKKCSKAPKIQRLVTPWTLQRKRGRISEKKRRIAKAKSEAAEYQKILASCLKEQPERRSESLA
        MRGPKR SKIRKLFNLSKDDDVRKYVNTY +TFT K GKKCSKAPKIQRLVTP TLQRKR RI+EKK+RIAKAKSEAAEYQK+LAS LKEQ ERRSESLA
Subjt:  MRGPKRPSKIRKLFNLSKDDDVRKYVNTYSKTFTDKLGKKCSKAPKIQRLVTPWTLQRKRGRISEKKRRIAKAKSEAAEYQKILASCLKEQPERRSESLA

Query:  KRRSKLSAASKPSIA
        KRRSKLSAASKPS+A
Subjt:  KRRSKLSAASKPSIA

XP_008440575.1 PREDICTED: LOW QUALITY PROTEIN: 40S ribosomal protein S6 [Cucumis melo]1.6e-52100Show/hide
Query:  MRGPKRPSKIRKLFNLSKDDDVRKYVNTYSKTFTDKLGKKCSKAPKIQRLVTPWTLQRKRGRISEKKRRIAKAKSEAAEYQKILASCLKEQPERRSESLA
        MRGPKRPSKIRKLFNLSKDDDVRKYVNTYSKTFTDKLGKKCSKAPKIQRLVTPWTLQRKRGRISEKKRRIAKAKSEAAEYQKILASCLKEQPERRSESLA
Subjt:  MRGPKRPSKIRKLFNLSKDDDVRKYVNTYSKTFTDKLGKKCSKAPKIQRLVTPWTLQRKRGRISEKKRRIAKAKSEAAEYQKILASCLKEQPERRSESLA

Query:  KRRSKLSAASKPSIAA
        KRRSKLSAASKPSIAA
Subjt:  KRRSKLSAASKPSIAA

XP_022133330.1 40S ribosomal protein S6-like [Momordica charantia]3.1e-4388.79Show/hide
Query:  MRGPKRPSKIRKLFNLSKDDDVRKYVNTYSKTFTDKLGKKCSKAPKIQRLVTPWTLQRKRGRISEKKRRIAKAKSEAAEYQKILASCLKEQPERRSESLA
        MRGPKR SKIRKLFNLSKDDDVRKYVNTY +TFT K GKKCSKAPKIQRLVTP TLQRKRGRI+EKK+RIAKAKSEAAEYQK+LAS LKEQ ERRSESLA
Subjt:  MRGPKRPSKIRKLFNLSKDDDVRKYVNTYSKTFTDKLGKKCSKAPKIQRLVTPWTLQRKRGRISEKKRRIAKAKSEAAEYQKILASCLKEQPERRSESLA

Query:  KRRSKLSAASKPSIAA
        KRRSKLS ASKPS AA
Subjt:  KRRSKLSAASKPSIAA

XP_038882784.1 40S ribosomal protein S6-like [Benincasa hispida]4.7e-4488.79Show/hide
Query:  MRGPKRPSKIRKLFNLSKDDDVRKYVNTYSKTFTDKLGKKCSKAPKIQRLVTPWTLQRKRGRISEKKRRIAKAKSEAAEYQKILASCLKEQPERRSESLA
        MRGPKR SKIRKLFNLSKDDDVRKYVNTY +TFT+K GKKCSKAPKIQRLVTP+TLQRKRGRI+EKK+RIAKAKSEAAEYQK+LAS LKEQ ERRSESLA
Subjt:  MRGPKRPSKIRKLFNLSKDDDVRKYVNTYSKTFTDKLGKKCSKAPKIQRLVTPWTLQRKRGRISEKKRRIAKAKSEAAEYQKILASCLKEQPERRSESLA

Query:  KRRSKLSAASKPSIAA
        KRRSKLS ASKPSI A
Subjt:  KRRSKLSAASKPSIAA

TrEMBL top hitse value%identityAlignment
A0A1S3B1F1 40S ribosomal protein S67.8e-53100Show/hide
Query:  MRGPKRPSKIRKLFNLSKDDDVRKYVNTYSKTFTDKLGKKCSKAPKIQRLVTPWTLQRKRGRISEKKRRIAKAKSEAAEYQKILASCLKEQPERRSESLA
        MRGPKRPSKIRKLFNLSKDDDVRKYVNTYSKTFTDKLGKKCSKAPKIQRLVTPWTLQRKRGRISEKKRRIAKAKSEAAEYQKILASCLKEQPERRSESLA
Subjt:  MRGPKRPSKIRKLFNLSKDDDVRKYVNTYSKTFTDKLGKKCSKAPKIQRLVTPWTLQRKRGRISEKKRRIAKAKSEAAEYQKILASCLKEQPERRSESLA

Query:  KRRSKLSAASKPSIAA
        KRRSKLSAASKPSIAA
Subjt:  KRRSKLSAASKPSIAA

A0A2I0WHS4 40S ribosomal protein S63.3e-4387.93Show/hide
Query:  MRGPKRPSKIRKLFNLSKDDDVRKYVNTYSKTFTDKLGKKCSKAPKIQRLVTPWTLQRKRGRISEKKRRIAKAKSEAAEYQKILASCLKEQPERRSESLA
        MRGPKR SKIRKLFNLSK+DDVRKYVNTY +TFT K GKKCSKAPKIQRLVTP TLQRKR RI+EKKRRI KAKSEAAEYQK+LAS LKEQ ERRSESLA
Subjt:  MRGPKRPSKIRKLFNLSKDDDVRKYVNTYSKTFTDKLGKKCSKAPKIQRLVTPWTLQRKRGRISEKKRRIAKAKSEAAEYQKILASCLKEQPERRSESLA

Query:  KRRSKLSAASKPSIAA
        KRRSKLSAASKPS+AA
Subjt:  KRRSKLSAASKPSIAA

A0A2I4GV42 40S ribosomal protein S61.9e-4387.93Show/hide
Query:  MRGPKRPSKIRKLFNLSKDDDVRKYVNTYSKTFTDKLGKKCSKAPKIQRLVTPWTLQRKRGRISEKKRRIAKAKSEAAEYQKILASCLKEQPERRSESLA
        MRGPKR SKIRKLFNLSKDDDVRKYVNTY +TFT K GKKCSKAPKIQRLVTP TLQRKRGRI+EKK+RIAKAKSEAAEYQK+LA+ LKEQ ERRSESLA
Subjt:  MRGPKRPSKIRKLFNLSKDDDVRKYVNTYSKTFTDKLGKKCSKAPKIQRLVTPWTLQRKRGRISEKKRRIAKAKSEAAEYQKILASCLKEQPERRSESLA

Query:  KRRSKLSAASKPSIAA
        KRRS+LS ASKPSIAA
Subjt:  KRRSKLSAASKPSIAA

A0A5A7T4L6 40S ribosomal protein S62.8e-5091.34Show/hide
Query:  MRGPKRPSKIRKLFNLSKDDDVRKYVNTYSKTFTDKL-----------GKKCSKAPKIQRLVTPWTLQRKRGRISEKKRRIAKAKSEAAEYQKILASCLK
        MRGPKRPSKIRKLFNLSKDDDVRKYVNTYSKTFTDKL           GKKCSKAPKIQRLVTPWTLQRKRGRISEKKRRIAKAKSEAAEYQKILASCLK
Subjt:  MRGPKRPSKIRKLFNLSKDDDVRKYVNTYSKTFTDKL-----------GKKCSKAPKIQRLVTPWTLQRKRGRISEKKRRIAKAKSEAAEYQKILASCLK

Query:  EQPERRSESLAKRRSKLSAASKPSIAA
        EQPERRSESLAKRRSKLSAASKPSIAA
Subjt:  EQPERRSESLAKRRSKLSAASKPSIAA

A0A6J1BUY4 40S ribosomal protein S61.5e-4388.79Show/hide
Query:  MRGPKRPSKIRKLFNLSKDDDVRKYVNTYSKTFTDKLGKKCSKAPKIQRLVTPWTLQRKRGRISEKKRRIAKAKSEAAEYQKILASCLKEQPERRSESLA
        MRGPKR SKIRKLFNLSKDDDVRKYVNTY +TFT K GKKCSKAPKIQRLVTP TLQRKRGRI+EKK+RIAKAKSEAAEYQK+LAS LKEQ ERRSESLA
Subjt:  MRGPKRPSKIRKLFNLSKDDDVRKYVNTYSKTFTDKLGKKCSKAPKIQRLVTPWTLQRKRGRISEKKRRIAKAKSEAAEYQKILASCLKEQPERRSESLA

Query:  KRRSKLSAASKPSIAA
        KRRSKLS ASKPS AA
Subjt:  KRRSKLSAASKPSIAA

SwissProt top hitse value%identityAlignment
O48549 40S ribosomal protein S6-12.0e-3774.36Show/hide
Query:  MRGPKRPSKIRKLFNLSKDDDVRKYVNTYSKTFTDKLGKKCSKAPKIQRLVTPWTLQRKRGRISEKKRRIAKAKSEAAEYQKILASCLKEQPERRSESLA
        MRGPKR SKIRKLFNL K+DDVR YVNTY + FT+K GK+ SKAPKIQRLVTP TLQRKR RI++KK++IAKA S+AA+YQK+LAS LKEQ +RRSESLA
Subjt:  MRGPKRPSKIRKLFNLSKDDDVRKYVNTYSKTFTDKLGKKCSKAPKIQRLVTPWTLQRKRGRISEKKRRIAKAKSEAAEYQKILASCLKEQPERRSESLA

Query:  KRRSKL-SAASKPSIAA
        K+RS+L SAA+KPS+ A
Subjt:  KRRSKL-SAASKPSIAA

P29345 40S ribosomal protein S6 (Fragment)4.8e-3172.41Show/hide
Query:  MRGPKRPSKIRKLFNLSKDDDVRKYVNTYSKTFTDKLGKKCSKAPKIQRLVTPWTLQRKRGRISEKKRRIAKAKSEAAEYQKILASCLKEQPERRSESLA
        MRGP+ P +   L+   K+DDVRKYVNT ++ FT K   K SKAPKIQRLVTP TLQRKR RI++KK+RIAKAKSEAAEYQK+LAS LKEQ E+RSESLA
Subjt:  MRGPKRPSKIRKLFNLSKDDDVRKYVNTYSKTFTDKLGKKCSKAPKIQRLVTPWTLQRKRGRISEKKRRIAKAKSEAAEYQKILASCLKEQPERRSESLA

Query:  KRRSKLSAASKPSIAA
        K+RS+LSAASKPSIAA
Subjt:  KRRSKLSAASKPSIAA

P51430 40S ribosomal protein S6-21.1e-3875.86Show/hide
Query:  MRGPKRPSKIRKLFNLSKDDDVRKYVNTYSKTFTDKLGKKCSKAPKIQRLVTPWTLQRKRGRISEKKRRIAKAKSEAAEYQKILASCLKEQPERRSESLA
        MRGPKR SKIRKLFNL K+DDVRKYVNTY +TFT+K GKK SKAPKIQRLVTP TLQRKR RI++KK+RIAKA S+AA+YQK+LAS LKEQ +RRSESLA
Subjt:  MRGPKRPSKIRKLFNLSKDDDVRKYVNTYSKTFTDKLGKKCSKAPKIQRLVTPWTLQRKRGRISEKKRRIAKAKSEAAEYQKILASCLKEQPERRSESLA

Query:  KRRSKLSAASKPSIAA
        K+RS+LS+A    +AA
Subjt:  KRRSKLSAASKPSIAA

P62753 40S ribosomal protein S62.9e-2057.52Show/hide
Query:  GPKRPSKIRKLFNLSKDDDVRKYVNTYSKTFTDKLGKKCSKAPKIQRLVTPWTLQRKRGRISEKKRRIAKAKSEAAEYQKILASCLKEQPERRSESLAKR
        GPKR S+IRKLFNLSK+DDVR+YV    K    +  K  +KAPKIQRLVTP  LQ KR RI+ KK+R  K K EAAEY K+LA  +KE  E+R E +AKR
Subjt:  GPKRPSKIRKLFNLSKDDDVRKYVNTYSKTFTDKLGKKCSKAPKIQRLVTPWTLQRKRGRISEKKRRIAKAKSEAAEYQKILASCLKEQPERRSESLAKR

Query:  R--SKLSAASKPS
        R  S L A++  S
Subjt:  R--SKLSAASKPS

Q9M3V8 40S ribosomal protein S63.0e-4182.73Show/hide
Query:  MRGPKRPSKIRKLFNLSKDDDVRKYVNTYSKTFTDKLGKKCSKAPKIQRLVTPWTLQRKRGRISEKKRRIAKAKSEAAEYQKILASCLKEQPERRSESLA
        MRGPKR SKIRKLFNLSK+DDVRKYVNTY +TFT+K GK CSKAPKIQRLVTP TLQRKR RI+EKK+R+AKAKSEAAEYQK+LAS LKEQ +RRSESLA
Subjt:  MRGPKRPSKIRKLFNLSKDDDVRKYVNTYSKTFTDKLGKKCSKAPKIQRLVTPWTLQRKRGRISEKKRRIAKAKSEAAEYQKILASCLKEQPERRSESLA

Query:  KRRSKLSAAS
        K+RS+LSAA+
Subjt:  KRRSKLSAAS

Arabidopsis top hitse value%identityAlignment
AT4G31700.1 ribosomal protein S61.4e-3874.36Show/hide
Query:  MRGPKRPSKIRKLFNLSKDDDVRKYVNTYSKTFTDKLGKKCSKAPKIQRLVTPWTLQRKRGRISEKKRRIAKAKSEAAEYQKILASCLKEQPERRSESLA
        MRGPKR SKIRKLFNL K+DDVR YVNTY + FT+K GK+ SKAPKIQRLVTP TLQRKR RI++KK++IAKA S+AA+YQK+LAS LKEQ +RRSESLA
Subjt:  MRGPKRPSKIRKLFNLSKDDDVRKYVNTYSKTFTDKLGKKCSKAPKIQRLVTPWTLQRKRGRISEKKRRIAKAKSEAAEYQKILASCLKEQPERRSESLA

Query:  KRRSKL-SAASKPSIAA
        K+RS+L SAA+KPS+ A
Subjt:  KRRSKL-SAASKPSIAA

AT4G31700.2 ribosomal protein S61.4e-3874.36Show/hide
Query:  MRGPKRPSKIRKLFNLSKDDDVRKYVNTYSKTFTDKLGKKCSKAPKIQRLVTPWTLQRKRGRISEKKRRIAKAKSEAAEYQKILASCLKEQPERRSESLA
        MRGPKR SKIRKLFNL K+DDVR YVNTY + FT+K GK+ SKAPKIQRLVTP TLQRKR RI++KK++IAKA S+AA+YQK+LAS LKEQ +RRSESLA
Subjt:  MRGPKRPSKIRKLFNLSKDDDVRKYVNTYSKTFTDKLGKKCSKAPKIQRLVTPWTLQRKRGRISEKKRRIAKAKSEAAEYQKILASCLKEQPERRSESLA

Query:  KRRSKL-SAASKPSIAA
        K+RS+L SAA+KPS+ A
Subjt:  KRRSKL-SAASKPSIAA

AT5G10360.1 Ribosomal protein S6e7.5e-4075.86Show/hide
Query:  MRGPKRPSKIRKLFNLSKDDDVRKYVNTYSKTFTDKLGKKCSKAPKIQRLVTPWTLQRKRGRISEKKRRIAKAKSEAAEYQKILASCLKEQPERRSESLA
        MRGPKR SKIRKLFNL K+DDVRKYVNTY +TFT+K GKK SKAPKIQRLVTP TLQRKR RI++KK+RIAKA S+AA+YQK+LAS LKEQ +RRSESLA
Subjt:  MRGPKRPSKIRKLFNLSKDDDVRKYVNTYSKTFTDKLGKKCSKAPKIQRLVTPWTLQRKRGRISEKKRRIAKAKSEAAEYQKILASCLKEQPERRSESLA

Query:  KRRSKLSAASKPSIAA
        K+RS+LS+A    +AA
Subjt:  KRRSKLSAASKPSIAA

AT5G10360.2 Ribosomal protein S6e2.4e-2272.84Show/hide
Query:  KLGKKCSKAPKIQRLVTPWTLQRKRGRISEKKRRIAKAKSEAAEYQKILASCLKEQPERRSESLAKRRSKLSAASKPSIAA
        K GKK SKAPKIQRLVTP TLQRKR RI++KK+RIAKA S+AA+YQK+LAS LKEQ +RRSESLAK+RS+LS+A    +AA
Subjt:  KLGKKCSKAPKIQRLVTPWTLQRKRGRISEKKRRIAKAKSEAAEYQKILASCLKEQPERRSESLAKRRSKLSAASKPSIAA


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCGAGGTCCGAAAAGGCCATCTAAGATCCGGAAACTCTTCAATCTCTCCAAGGATGATGATGTTCGGAAGTATGTCAACACATACAGCAAAACCTTCACAGATAAACT
TGGTAAGAAATGTAGTAAAGCCCCCAAAATCCAGAGGCTGGTAACCCCCTGGACTCTCCAAAGGAAGCGAGGAAGGATTTCTGAAAAGAAAAGGAGAATTGCCAAAGCCA
AGTCAGAAGCAGCCGAGTATCAGAAGATTTTGGCATCATGTTTGAAAGAACAACCCGAGCGCCGCAGTGAGAGCTTAGCAAAGAGAAGATCCAAGCTCTCTGCTGCCTCC
AAGCCTTCTATTGCTGCTTAG
mRNA sequenceShow/hide mRNA sequence
ATGCGAGGTCCGAAAAGGCCATCTAAGATCCGGAAACTCTTCAATCTCTCCAAGGATGATGATGTTCGGAAGTATGTCAACACATACAGCAAAACCTTCACAGATAAACT
TGGTAAGAAATGTAGTAAAGCCCCCAAAATCCAGAGGCTGGTAACCCCCTGGACTCTCCAAAGGAAGCGAGGAAGGATTTCTGAAAAGAAAAGGAGAATTGCCAAAGCCA
AGTCAGAAGCAGCCGAGTATCAGAAGATTTTGGCATCATGTTTGAAAGAACAACCCGAGCGCCGCAGTGAGAGCTTAGCAAAGAGAAGATCCAAGCTCTCTGCTGCCTCC
AAGCCTTCTATTGCTGCTTAGATATACTTCTCTGAAATTTTGTCCGAGTTAGTTGAGCATGGAGCGTTCCTGGACACTCTCAGTCCATAAATTAGGGAAATTTGGTTGCT
ATTACCAAGAGTTGGTTTGATAGTTTTAAAATTTTGGGTTCGCTAGTTTGACCTCATGTAACATTTGATTATTTTTTCAAGTTAATACTTATTCCATACAAGTATGGATT
ACTTTTGT
Protein sequenceShow/hide protein sequence
MRGPKRPSKIRKLFNLSKDDDVRKYVNTYSKTFTDKLGKKCSKAPKIQRLVTPWTLQRKRGRISEKKRRIAKAKSEAAEYQKILASCLKEQPERRSESLAKRRSKLSAAS
KPSIAA