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MELO3C007740.jh1 (gene) of Melon (Harukei-3) v1.41 genome

Gene IDMELO3C007740.jh1
OrganismCucumis melo var. reticulatus cv. Harukei-3 (Melon (Harukei-3) v1.41)
Description40S ribosomal protein S6
Genome locationchr08:4987762..4989732
RNA-Seq ExpressionMELO3C007740.jh1
SyntenyMELO3C007740.jh1
Gene Ontology termsGO:0006412 - translation (biological process)
GO:0005737 - cytoplasm (cellular component)
GO:0005840 - ribosome (cellular component)
GO:0016021 - integral component of membrane (cellular component)
GO:0003735 - structural constituent of ribosome (molecular function)
InterPro domainsIPR001377 - Ribosomal protein S6e


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0036319.1 40S ribosomal protein S6 [Cucumis melo var. makuwa]1.21e-6290.55Show/hide
Query:  MRGPKRPSKIRKLFNLSKDDDVRKYVNTYSKTFTDKLG-----------KKCSKAPKIQRLVTPWTLQRKRGRISEKKRRIAKAKSEAAEYQKILASCLK
        MRGPKRPSKIRKLFNLSKDDDVRKYVNTYSKTFTDKLG           KKCSKAPKIQRLVTPWTLQRKRGRISEKKRRIAKAKSEAAEYQKILASCLK
Subjt:  MRGPKRPSKIRKLFNLSKDDDVRKYVNTYSKTFTDKLG-----------KKCSKAPKIQRLVTPWTLQRKRGRISEKKRRIAKAKSEAAEYQKILASCLK

Query:  EQRERRSESLAKRRSKLSAASKPSIAA
        EQ ERRSESLAKRRSKLSAASKPSIAA
Subjt:  EQRERRSESLAKRRSKLSAASKPSIAA

RRT54148.1 hypothetical protein B296_00029478 [Ensete ventricosum]6.54e-5687.93Show/hide
Query:  MRGPKRPSKIRKLFNLSKDDDVRKYVNTYSKTFTDKLGKKCSKAPKIQRLVTPWTLQRKRGRISEKKRRIAKAKSEAAEYQKILASCLKEQRERRSESLA
        MRGPKR SKIRKLFNLSK+DDVRKYVNTY +TFT K GKKCSKAPKIQRLVTP TLQRKR RI+EKK+RIAKAKSEAAEYQK+LA+ LKEQRERRSESLA
Subjt:  MRGPKRPSKIRKLFNLSKDDDVRKYVNTYSKTFTDKLGKKCSKAPKIQRLVTPWTLQRKRGRISEKKRRIAKAKSEAAEYQKILASCLKEQRERRSESLA

Query:  KRRSKLSAASKPSIAA
        KRRSKLSAASKPS+AA
Subjt:  KRRSKLSAASKPSIAA

RWW05228.1 hypothetical protein GW17_00031510 [Ensete ventricosum]6.54e-5687.93Show/hide
Query:  MRGPKRPSKIRKLFNLSKDDDVRKYVNTYSKTFTDKLGKKCSKAPKIQRLVTPWTLQRKRGRISEKKRRIAKAKSEAAEYQKILASCLKEQRERRSESLA
        MRGPKR SKIRKLFNLSK+DDVRKYVNTY +TFT K GKKCSKAPKIQRLVTP TLQRKR RI+EKK+RIAKAKSEAAEYQK+LA+ LKEQRERRSESLA
Subjt:  MRGPKRPSKIRKLFNLSKDDDVRKYVNTYSKTFTDKLGKKCSKAPKIQRLVTPWTLQRKRGRISEKKRRIAKAKSEAAEYQKILASCLKEQRERRSESLA

Query:  KRRSKLSAASKPSIAA
        KRRSKLSAASKPS+AA
Subjt:  KRRSKLSAASKPSIAA

XP_008440575.1 PREDICTED: LOW QUALITY PROTEIN: 40S ribosomal protein S6 [Cucumis melo]1.45e-6599.14Show/hide
Query:  MRGPKRPSKIRKLFNLSKDDDVRKYVNTYSKTFTDKLGKKCSKAPKIQRLVTPWTLQRKRGRISEKKRRIAKAKSEAAEYQKILASCLKEQRERRSESLA
        MRGPKRPSKIRKLFNLSKDDDVRKYVNTYSKTFTDKLGKKCSKAPKIQRLVTPWTLQRKRGRISEKKRRIAKAKSEAAEYQKILASCLKEQ ERRSESLA
Subjt:  MRGPKRPSKIRKLFNLSKDDDVRKYVNTYSKTFTDKLGKKCSKAPKIQRLVTPWTLQRKRGRISEKKRRIAKAKSEAAEYQKILASCLKEQRERRSESLA

Query:  KRRSKLSAASKPSIAA
        KRRSKLSAASKPSIAA
Subjt:  KRRSKLSAASKPSIAA

XP_038882784.1 40S ribosomal protein S6-like [Benincasa hispida]6.62e-5789.66Show/hide
Query:  MRGPKRPSKIRKLFNLSKDDDVRKYVNTYSKTFTDKLGKKCSKAPKIQRLVTPWTLQRKRGRISEKKRRIAKAKSEAAEYQKILASCLKEQRERRSESLA
        MRGPKR SKIRKLFNLSKDDDVRKYVNTY +TFT+K GKKCSKAPKIQRLVTP+TLQRKRGRI+EKK+RIAKAKSEAAEYQK+LAS LKEQRERRSESLA
Subjt:  MRGPKRPSKIRKLFNLSKDDDVRKYVNTYSKTFTDKLGKKCSKAPKIQRLVTPWTLQRKRGRISEKKRRIAKAKSEAAEYQKILASCLKEQRERRSESLA

Query:  KRRSKLSAASKPSIAA
        KRRSKLS ASKPSI A
Subjt:  KRRSKLSAASKPSIAA

TrEMBL top hitse value%identityAlignment
A0A1S3B1F1 40S ribosomal protein S67.03e-6699.14Show/hide
Query:  MRGPKRPSKIRKLFNLSKDDDVRKYVNTYSKTFTDKLGKKCSKAPKIQRLVTPWTLQRKRGRISEKKRRIAKAKSEAAEYQKILASCLKEQRERRSESLA
        MRGPKRPSKIRKLFNLSKDDDVRKYVNTYSKTFTDKLGKKCSKAPKIQRLVTPWTLQRKRGRISEKKRRIAKAKSEAAEYQKILASCLKEQ ERRSESLA
Subjt:  MRGPKRPSKIRKLFNLSKDDDVRKYVNTYSKTFTDKLGKKCSKAPKIQRLVTPWTLQRKRGRISEKKRRIAKAKSEAAEYQKILASCLKEQRERRSESLA

Query:  KRRSKLSAASKPSIAA
        KRRSKLSAASKPSIAA
Subjt:  KRRSKLSAASKPSIAA

A0A426YR00 Uncharacterized protein3.16e-5687.93Show/hide
Query:  MRGPKRPSKIRKLFNLSKDDDVRKYVNTYSKTFTDKLGKKCSKAPKIQRLVTPWTLQRKRGRISEKKRRIAKAKSEAAEYQKILASCLKEQRERRSESLA
        MRGPKR SKIRKLFNLSK+DDVRKYVNTY +TFT K GKKCSKAPKIQRLVTP TLQRKR RI+EKK+RIAKAKSEAAEYQK+LA+ LKEQRERRSESLA
Subjt:  MRGPKRPSKIRKLFNLSKDDDVRKYVNTYSKTFTDKLGKKCSKAPKIQRLVTPWTLQRKRGRISEKKRRIAKAKSEAAEYQKILASCLKEQRERRSESLA

Query:  KRRSKLSAASKPSIAA
        KRRSKLSAASKPS+AA
Subjt:  KRRSKLSAASKPSIAA

A0A444E4G3 Uncharacterized protein3.16e-5687.93Show/hide
Query:  MRGPKRPSKIRKLFNLSKDDDVRKYVNTYSKTFTDKLGKKCSKAPKIQRLVTPWTLQRKRGRISEKKRRIAKAKSEAAEYQKILASCLKEQRERRSESLA
        MRGPKR SKIRKLFNLSK+DDVRKYVNTY +TFT K GKKCSKAPKIQRLVTP TLQRKR RI+EKK+RIAKAKSEAAEYQK+LA+ LKEQRERRSESLA
Subjt:  MRGPKRPSKIRKLFNLSKDDDVRKYVNTYSKTFTDKLGKKCSKAPKIQRLVTPWTLQRKRGRISEKKRRIAKAKSEAAEYQKILASCLKEQRERRSESLA

Query:  KRRSKLSAASKPSIAA
        KRRSKLSAASKPS+AA
Subjt:  KRRSKLSAASKPSIAA

A0A5A7T4L6 40S ribosomal protein S65.84e-6390.55Show/hide
Query:  MRGPKRPSKIRKLFNLSKDDDVRKYVNTYSKTFTDKLG-----------KKCSKAPKIQRLVTPWTLQRKRGRISEKKRRIAKAKSEAAEYQKILASCLK
        MRGPKRPSKIRKLFNLSKDDDVRKYVNTYSKTFTDKLG           KKCSKAPKIQRLVTPWTLQRKRGRISEKKRRIAKAKSEAAEYQKILASCLK
Subjt:  MRGPKRPSKIRKLFNLSKDDDVRKYVNTYSKTFTDKLG-----------KKCSKAPKIQRLVTPWTLQRKRGRISEKKRRIAKAKSEAAEYQKILASCLK

Query:  EQRERRSESLAKRRSKLSAASKPSIAA
        EQ ERRSESLAKRRSKLSAASKPSIAA
Subjt:  EQRERRSESLAKRRSKLSAASKPSIAA

A0A6J1BUY4 40S ribosomal protein S63.68e-5689.66Show/hide
Query:  MRGPKRPSKIRKLFNLSKDDDVRKYVNTYSKTFTDKLGKKCSKAPKIQRLVTPWTLQRKRGRISEKKRRIAKAKSEAAEYQKILASCLKEQRERRSESLA
        MRGPKR SKIRKLFNLSKDDDVRKYVNTY +TFT K GKKCSKAPKIQRLVTP TLQRKRGRI+EKK+RIAKAKSEAAEYQK+LAS LKEQRERRSESLA
Subjt:  MRGPKRPSKIRKLFNLSKDDDVRKYVNTYSKTFTDKLGKKCSKAPKIQRLVTPWTLQRKRGRISEKKRRIAKAKSEAAEYQKILASCLKEQRERRSESLA

Query:  KRRSKLSAASKPSIAA
        KRRSKLS ASKPS AA
Subjt:  KRRSKLSAASKPSIAA

SwissProt top hitse value%identityAlignment
O48549 40S ribosomal protein S6-15.2e-3875.21Show/hide
Query:  MRGPKRPSKIRKLFNLSKDDDVRKYVNTYSKTFTDKLGKKCSKAPKIQRLVTPWTLQRKRGRISEKKRRIAKAKSEAAEYQKILASCLKEQRERRSESLA
        MRGPKR SKIRKLFNL K+DDVR YVNTY + FT+K GK+ SKAPKIQRLVTP TLQRKR RI++KK++IAKA S+AA+YQK+LAS LKEQR+RRSESLA
Subjt:  MRGPKRPSKIRKLFNLSKDDDVRKYVNTYSKTFTDKLGKKCSKAPKIQRLVTPWTLQRKRGRISEKKRRIAKAKSEAAEYQKILASCLKEQRERRSESLA

Query:  KRRSKL-SAASKPSIAA
        K+RS+L SAA+KPS+ A
Subjt:  KRRSKL-SAASKPSIAA

P29345 40S ribosomal protein S6 (Fragment)1.3e-3173.28Show/hide
Query:  MRGPKRPSKIRKLFNLSKDDDVRKYVNTYSKTFTDKLGKKCSKAPKIQRLVTPWTLQRKRGRISEKKRRIAKAKSEAAEYQKILASCLKEQRERRSESLA
        MRGP+ P +   L+   K+DDVRKYVNT ++ FT K   K SKAPKIQRLVTP TLQRKR RI++KK+RIAKAKSEAAEYQK+LAS LKEQRE+RSESLA
Subjt:  MRGPKRPSKIRKLFNLSKDDDVRKYVNTYSKTFTDKLGKKCSKAPKIQRLVTPWTLQRKRGRISEKKRRIAKAKSEAAEYQKILASCLKEQRERRSESLA

Query:  KRRSKLSAASKPSIAA
        K+RS+LSAASKPSIAA
Subjt:  KRRSKLSAASKPSIAA

P51430 40S ribosomal protein S6-22.8e-3976.72Show/hide
Query:  MRGPKRPSKIRKLFNLSKDDDVRKYVNTYSKTFTDKLGKKCSKAPKIQRLVTPWTLQRKRGRISEKKRRIAKAKSEAAEYQKILASCLKEQRERRSESLA
        MRGPKR SKIRKLFNL K+DDVRKYVNTY +TFT+K GKK SKAPKIQRLVTP TLQRKR RI++KK+RIAKA S+AA+YQK+LAS LKEQR+RRSESLA
Subjt:  MRGPKRPSKIRKLFNLSKDDDVRKYVNTYSKTFTDKLGKKCSKAPKIQRLVTPWTLQRKRGRISEKKRRIAKAKSEAAEYQKILASCLKEQRERRSESLA

Query:  KRRSKLSAASKPSIAA
        K+RS+LS+A    +AA
Subjt:  KRRSKLSAASKPSIAA

P62753 40S ribosomal protein S62.2e-2057.52Show/hide
Query:  GPKRPSKIRKLFNLSKDDDVRKYVNTYSKTFTDKLGKKCSKAPKIQRLVTPWTLQRKRGRISEKKRRIAKAKSEAAEYQKILASCLKEQRERRSESLAKR
        GPKR S+IRKLFNLSK+DDVR+YV    K    +  K  +KAPKIQRLVTP  LQ KR RI+ KK+R  K K EAAEY K+LA  +KE +E+R E +AKR
Subjt:  GPKRPSKIRKLFNLSKDDDVRKYVNTYSKTFTDKLGKKCSKAPKIQRLVTPWTLQRKRGRISEKKRRIAKAKSEAAEYQKILASCLKEQRERRSESLAKR

Query:  R--SKLSAASKPS
        R  S L A++  S
Subjt:  R--SKLSAASKPS

Q9M3V8 40S ribosomal protein S61.0e-4183.64Show/hide
Query:  MRGPKRPSKIRKLFNLSKDDDVRKYVNTYSKTFTDKLGKKCSKAPKIQRLVTPWTLQRKRGRISEKKRRIAKAKSEAAEYQKILASCLKEQRERRSESLA
        MRGPKR SKIRKLFNLSK+DDVRKYVNTY +TFT+K GK CSKAPKIQRLVTP TLQRKR RI+EKK+R+AKAKSEAAEYQK+LAS LKEQR+RRSESLA
Subjt:  MRGPKRPSKIRKLFNLSKDDDVRKYVNTYSKTFTDKLGKKCSKAPKIQRLVTPWTLQRKRGRISEKKRRIAKAKSEAAEYQKILASCLKEQRERRSESLA

Query:  KRRSKLSAAS
        K+RS+LSAA+
Subjt:  KRRSKLSAAS

Arabidopsis top hitse value%identityAlignment
AT4G31700.1 ribosomal protein S63.7e-3975.21Show/hide
Query:  MRGPKRPSKIRKLFNLSKDDDVRKYVNTYSKTFTDKLGKKCSKAPKIQRLVTPWTLQRKRGRISEKKRRIAKAKSEAAEYQKILASCLKEQRERRSESLA
        MRGPKR SKIRKLFNL K+DDVR YVNTY + FT+K GK+ SKAPKIQRLVTP TLQRKR RI++KK++IAKA S+AA+YQK+LAS LKEQR+RRSESLA
Subjt:  MRGPKRPSKIRKLFNLSKDDDVRKYVNTYSKTFTDKLGKKCSKAPKIQRLVTPWTLQRKRGRISEKKRRIAKAKSEAAEYQKILASCLKEQRERRSESLA

Query:  KRRSKL-SAASKPSIAA
        K+RS+L SAA+KPS+ A
Subjt:  KRRSKL-SAASKPSIAA

AT4G31700.2 ribosomal protein S63.7e-3975.21Show/hide
Query:  MRGPKRPSKIRKLFNLSKDDDVRKYVNTYSKTFTDKLGKKCSKAPKIQRLVTPWTLQRKRGRISEKKRRIAKAKSEAAEYQKILASCLKEQRERRSESLA
        MRGPKR SKIRKLFNL K+DDVR YVNTY + FT+K GK+ SKAPKIQRLVTP TLQRKR RI++KK++IAKA S+AA+YQK+LAS LKEQR+RRSESLA
Subjt:  MRGPKRPSKIRKLFNLSKDDDVRKYVNTYSKTFTDKLGKKCSKAPKIQRLVTPWTLQRKRGRISEKKRRIAKAKSEAAEYQKILASCLKEQRERRSESLA

Query:  KRRSKL-SAASKPSIAA
        K+RS+L SAA+KPS+ A
Subjt:  KRRSKL-SAASKPSIAA

AT5G10360.1 Ribosomal protein S6e2.0e-4076.72Show/hide
Query:  MRGPKRPSKIRKLFNLSKDDDVRKYVNTYSKTFTDKLGKKCSKAPKIQRLVTPWTLQRKRGRISEKKRRIAKAKSEAAEYQKILASCLKEQRERRSESLA
        MRGPKR SKIRKLFNL K+DDVRKYVNTY +TFT+K GKK SKAPKIQRLVTP TLQRKR RI++KK+RIAKA S+AA+YQK+LAS LKEQR+RRSESLA
Subjt:  MRGPKRPSKIRKLFNLSKDDDVRKYVNTYSKTFTDKLGKKCSKAPKIQRLVTPWTLQRKRGRISEKKRRIAKAKSEAAEYQKILASCLKEQRERRSESLA

Query:  KRRSKLSAASKPSIAA
        K+RS+LS+A    +AA
Subjt:  KRRSKLSAASKPSIAA

AT5G10360.2 Ribosomal protein S6e8.3e-2374.07Show/hide
Query:  KLGKKCSKAPKIQRLVTPWTLQRKRGRISEKKRRIAKAKSEAAEYQKILASCLKEQRERRSESLAKRRSKLSAASKPSIAA
        K GKK SKAPKIQRLVTP TLQRKR RI++KK+RIAKA S+AA+YQK+LAS LKEQR+RRSESLAK+RS+LS+A    +AA
Subjt:  KLGKKCSKAPKIQRLVTPWTLQRKRGRISEKKRRIAKAKSEAAEYQKILASCLKEQRERRSESLAKRRSKLSAASKPSIAA


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCGAGGTCCGAAAAGGCCATCTAAGATCCGGAAACTCTTCAATCTCTCCAAGGATGATGATGTTCGGAAGTATGTCAACACATACAGCAAAACCTTCACAGATAAACT
TGGTAAGAAATGTAGTAAAGCCCCCAAAATCCAGAGGCTGGTAACCCCCTGGACTCTCCAAAGGAAGCGAGGAAGGATTTCTGAAAAGAAAAGGAGAATTGCCAAAGCCA
AGTCAGAAGCAGCCGAGTATCAGAAGATTTTGGCATCATGTTTGAAAGAACAACGCGAGCGCCGCAGTGAGAGCTTAGCAAAGAGAAGATCCAAGCTCTCTGCTGCCTCC
AAGCCTTCTATTGCTGCTTAG
mRNA sequenceShow/hide mRNA sequence
TACGAAAATGTAATATGGTCAAATTCACAGCAAAATCCCTAATTCGTTGCCAAAGAACCGGAGCAGGAGTGGCAATCTTCTGTCCTAGCTAAGATGAAGTTCAACATTGC
AAATCCCACTACTGGGTGCCAGAAAAAGTTCGAAATCGATGACGATGCCAAACTCCGAACATTTTGGGACAAGAGGATCTCCCAAGAAGTTAATGGAGATGCGCTTGGTG
AAGACTTTAAAGGTTATGTTTTTAAAATAATGGGGTGTTTGTGACAAACAAGGTTTTCCAGTGAAGCAAGGTGTCTGGACCACTGGCCGTGTTTGCCTATTGCTGCACAG
AGGTACTCCTTGTTTTTGTGGTTATGGTAGGAGGAATGGTGAGAGGAGGAAATCTGTCCGTGGTTGCATTGTTAATCCAGACCTCTCTGTTTTGAATTTGGTGACTGTGA
GGTAGGGCGAGAATGATCTACCTGGCCTAACAGATATCAAGAAGCCAAGAATGCGAGGTCCGAAAAGGCCATCTAAGATCCGGAAACTCTTCAATCTCTCCAAGGATGAT
GATGTTCGGAAGTATGTCAACACATACAGCAAAACCTTCACAGATAAACTTGGTAAGAAATGTAGTAAAGCCCCCAAAATCCAGAGGCTGGTAACCCCCTGGACTCTCCA
AAGGAAGCGAGGAAGGATTTCTGAAAAGAAAAGGAGAATTGCCAAAGCCAAGTCAGAAGCAGCCGAGTATCAGAAGATTTTGGCATCATGTTTGAAAGAACAACGCGAGC
GCCGCAGTGAGAGCTTAGCAAAGAGAAGATCCAAGCTCTCTGCTGCCTCCAAGCCTTCTATTGCTGCTTAGATATACTTCTCTGAAATTTTGTCCGAGTTAGTTGAGCAT
GGAGCGTTCCTGGACACTCTCAGTCCATAGATTAGGGAAATTTGGTTGCTATTACCAAGAGTTGGTTTGATAGTTTTAAAATTTTGGGTTCGCTAGTTTGACCTCATGTA
ACATTTGATTATTTTTTCAAGTTAATACTTATTCCATACAAGTATGGATTACTTTTGTTA
Protein sequenceShow/hide protein sequence
MRGPKRPSKIRKLFNLSKDDDVRKYVNTYSKTFTDKLGKKCSKAPKIQRLVTPWTLQRKRGRISEKKRRIAKAKSEAAEYQKILASCLKEQRERRSESLAKRRSKLSAAS
KPSIAA