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MELO3C007743 (gene) of Melon (DHL92) v4 genome

Gene IDMELO3C007743
OrganismCucumis melo DHL92 (Melon (DHL92) v4)
DescriptionPolyadenylate-binding protein
Genome locationchr08:5050543..5051046
RNA-Seq ExpressionMELO3C007743
SyntenyMELO3C007743
Gene Ontology termsGO:0003723 - RNA binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0036316.1 polyadenylate-binding protein 2-like [Cucumis melo var. makuwa]2.5e-2298.46Show/hide
Query:  MEEEEHEVYGGEIPVEEGDIDMSAADDDAIKELDEMKKRLKEMEEEAAALREMQAKVEKEMDAVQ
        MEEEEHEVYGGEIPVEEGDIDMSAADDDAIKELDEMKKRLKEMEEEAAALREMQAKVEKEM AVQ
Subjt:  MEEEEHEVYGGEIPVEEGDIDMSAADDDAIKELDEMKKRLKEMEEEAAALREMQAKVEKEMDAVQ

XP_004143458.1 polyadenylate-binding protein 3 isoform X1 [Cucumis sativus]7.3e-2296.92Show/hide
Query:  MEEEEHEVYGGEIPVEEGDIDMSAADDDAIKELDEMKKRLKEMEEEAAALREMQAKVEKEMDAVQ
        MEEEEHEVYGGEIPVEEGDIDMSA DDDAIKELDEMKKRLKEMEEEAAALREMQAKVEKEM AVQ
Subjt:  MEEEEHEVYGGEIPVEEGDIDMSAADDDAIKELDEMKKRLKEMEEEAAALREMQAKVEKEMDAVQ

XP_008440581.1 PREDICTED: polyadenylate-binding protein 3-like [Cucumis melo]1.2e-29100Show/hide
Query:  MEEEEHEVYGGEIPVEEGDIDMSAADDDAIKELDEMKKRLKEMEEEAAALREMQAKVEKEMDAVQGLPPSRITFD
        MEEEEHEVYGGEIPVEEGDIDMSAADDDAIKELDEMKKRLKEMEEEAAALREMQAKVEKEMDAVQGLPPSRITFD
Subjt:  MEEEEHEVYGGEIPVEEGDIDMSAADDDAIKELDEMKKRLKEMEEEAAALREMQAKVEKEMDAVQGLPPSRITFD

XP_038882558.1 polyadenylate-binding protein 3-like isoform X1 [Benincasa hispida]3.4e-2794.67Show/hide
Query:  MEEEEHEVYGGEIPVEEGDIDMSAADDDAIKELDEMKKRLKEMEEEAAALREMQAKVEKEMDAVQGLPPSRITFD
        M+EEEHEVYGGEIPVEEGDIDMSAADDDAIKELDEMKKRLKEMEEEAAALREMQAKVEKEM AVQGLPPSR T D
Subjt:  MEEEEHEVYGGEIPVEEGDIDMSAADDDAIKELDEMKKRLKEMEEEAAALREMQAKVEKEMDAVQGLPPSRITFD

XP_038882559.1 polyadenylate-binding protein 3-like isoform X2 [Benincasa hispida]5.6e-2296.92Show/hide
Query:  MEEEEHEVYGGEIPVEEGDIDMSAADDDAIKELDEMKKRLKEMEEEAAALREMQAKVEKEMDAVQ
        M+EEEHEVYGGEIPVEEGDIDMSAADDDAIKELDEMKKRLKEMEEEAAALREMQAKVEKEM AVQ
Subjt:  MEEEEHEVYGGEIPVEEGDIDMSAADDDAIKELDEMKKRLKEMEEEAAALREMQAKVEKEMDAVQ

TrEMBL top hitse value%identityAlignment
A0A0A0KG83 RRM domain-containing protein3.5e-2296.92Show/hide
Query:  MEEEEHEVYGGEIPVEEGDIDMSAADDDAIKELDEMKKRLKEMEEEAAALREMQAKVEKEMDAVQ
        MEEEEHEVYGGEIPVEEGDIDMSA DDDAIKELDEMKKRLKEMEEEAAALREMQAKVEKEM AVQ
Subjt:  MEEEEHEVYGGEIPVEEGDIDMSAADDDAIKELDEMKKRLKEMEEEAAALREMQAKVEKEMDAVQ

A0A1S3B1F6 polyadenylate-binding protein 3-like6.0e-30100Show/hide
Query:  MEEEEHEVYGGEIPVEEGDIDMSAADDDAIKELDEMKKRLKEMEEEAAALREMQAKVEKEMDAVQGLPPSRITFD
        MEEEEHEVYGGEIPVEEGDIDMSAADDDAIKELDEMKKRLKEMEEEAAALREMQAKVEKEMDAVQGLPPSRITFD
Subjt:  MEEEEHEVYGGEIPVEEGDIDMSAADDDAIKELDEMKKRLKEMEEEAAALREMQAKVEKEMDAVQGLPPSRITFD

A0A5A7T2C2 Polyadenylate-binding protein 2-like1.2e-2298.46Show/hide
Query:  MEEEEHEVYGGEIPVEEGDIDMSAADDDAIKELDEMKKRLKEMEEEAAALREMQAKVEKEMDAVQ
        MEEEEHEVYGGEIPVEEGDIDMSAADDDAIKELDEMKKRLKEMEEEAAALREMQAKVEKEM AVQ
Subjt:  MEEEEHEVYGGEIPVEEGDIDMSAADDDAIKELDEMKKRLKEMEEEAAALREMQAKVEKEMDAVQ

A0A6J1BTY4 polyadenylate-binding protein 3-like isoform X17.9e-2295.38Show/hide
Query:  MEEEEHEVYGGEIPVEEGDIDMSAADDDAIKELDEMKKRLKEMEEEAAALREMQAKVEKEMDAVQ
        MEEEEHEVYGGEIPVEE D+DMSAADDDAIKELDEMKKRLKEMEEEAAALREMQAKVEKEM AVQ
Subjt:  MEEEEHEVYGGEIPVEEGDIDMSAADDDAIKELDEMKKRLKEMEEEAAALREMQAKVEKEMDAVQ

A0A6J1HIK8 polyadenylate-binding protein 3-like7.9e-2293.85Show/hide
Query:  MEEEEHEVYGGEIPVEEGDIDMSAADDDAIKELDEMKKRLKEMEEEAAALREMQAKVEKEMDAVQ
        M+EEEHEVYGGEIPVEEGD+DM+AADDDAIKELDEMKKRLKEMEEEAAALREMQAKVEKEM AVQ
Subjt:  MEEEEHEVYGGEIPVEEGDIDMSAADDDAIKELDEMKKRLKEMEEEAAALREMQAKVEKEMDAVQ

SwissProt top hitse value%identityAlignment
Q93VI4 Polyadenylate-binding protein 14.3e-0951.22Show/hide
Query:  EEEEHEVYGGEIP-VEEGDIDM-----------SAADDDAI------KELDEMKKRLKEMEEEAAALREMQAKVEKEMDAVQ
        +E+EHEVYGGEIP  EEG++D            +AA D+ +      ++L++MKKR+KE+EEEA ALREMQAK EK+M A Q
Subjt:  EEEEHEVYGGEIP-VEEGDIDM-----------SAADDDAI------KELDEMKKRLKEMEEEAAALREMQAKVEKEMDAVQ

Q9FJN9 Polyadenylate-binding protein 26.7e-1873.97Show/hide
Query:  MEEEEHEVYGGEIP----------VEEGDIDMSAADDDAIKELDEMKKRLKEMEEEAAALREMQAKVEKEMDA
        MEEEEHEVYGGEIP              D+DM+AADDDA+KELDEMKKRLKEME+EAAALREMQAKVEKEM A
Subjt:  MEEEEHEVYGGEIP----------VEEGDIDMSAADDDAIKELDEMKKRLKEMEEEAAALREMQAKVEKEMDA

Q9LX90 Polyadenylate-binding protein 33.0e-1877.46Show/hide
Query:  MEEEEHEVYGGEIP------VEEGDIDMSAADDDAIKELDEMKKRLKEMEEEAAALREMQAKVEKEMDAVQ
        MEEEEHEVYGGEIP      V + DIDMSAAD+DA+ EL EMK+RLKEMEEEAAALREMQAKVEKEM A Q
Subjt:  MEEEEHEVYGGEIP------VEEGDIDMSAADDDAIKELDEMKKRLKEMEEEAAALREMQAKVEKEMDAVQ

Arabidopsis top hitse value%identityAlignment
AT5G10350.1 RNA-binding (RRM/RBD/RNP motifs) family protein2.1e-1977.46Show/hide
Query:  MEEEEHEVYGGEIP------VEEGDIDMSAADDDAIKELDEMKKRLKEMEEEAAALREMQAKVEKEMDAVQ
        MEEEEHEVYGGEIP      V + DIDMSAAD+DA+ EL EMK+RLKEMEEEAAALREMQAKVEKEM A Q
Subjt:  MEEEEHEVYGGEIP------VEEGDIDMSAADDDAIKELDEMKKRLKEMEEEAAALREMQAKVEKEMDAVQ

AT5G10350.2 RNA-binding (RRM/RBD/RNP motifs) family protein2.1e-1977.46Show/hide
Query:  MEEEEHEVYGGEIP------VEEGDIDMSAADDDAIKELDEMKKRLKEMEEEAAALREMQAKVEKEMDAVQ
        MEEEEHEVYGGEIP      V + DIDMSAAD+DA+ EL EMK+RLKEMEEEAAALREMQAKVEKEM A Q
Subjt:  MEEEEHEVYGGEIP------VEEGDIDMSAADDDAIKELDEMKKRLKEMEEEAAALREMQAKVEKEMDAVQ

AT5G51120.1 polyadenylate-binding protein 13.1e-1051.22Show/hide
Query:  EEEEHEVYGGEIP-VEEGDIDM-----------SAADDDAI------KELDEMKKRLKEMEEEAAALREMQAKVEKEMDAVQ
        +E+EHEVYGGEIP  EEG++D            +AA D+ +      ++L++MKKR+KE+EEEA ALREMQAK EK+M A Q
Subjt:  EEEEHEVYGGEIP-VEEGDIDM-----------SAADDDAI------KELDEMKKRLKEMEEEAAALREMQAKVEKEMDAVQ

AT5G51120.2 polyadenylate-binding protein 11.6e-1152.38Show/hide
Query:  EEEEHEVYGGEIP-VEEGDIDM-----------SAADDDAI------KELDEMKKRLKEMEEEAAALREMQAKVEKEMDAVQGL
        +E+EHEVYGGEIP  EEG++D            +AA D+ +      ++L++MKKR+KE+EEEA ALREMQAK EK+M A QGL
Subjt:  EEEEHEVYGGEIP-VEEGDIDM-----------SAADDDAI------KELDEMKKRLKEMEEEAAALREMQAKVEKEMDAVQGL

AT5G65260.1 RNA-binding (RRM/RBD/RNP motifs) family protein4.7e-1973.97Show/hide
Query:  MEEEEHEVYGGEIP----------VEEGDIDMSAADDDAIKELDEMKKRLKEMEEEAAALREMQAKVEKEMDA
        MEEEEHEVYGGEIP              D+DM+AADDDA+KELDEMKKRLKEME+EAAALREMQAKVEKEM A
Subjt:  MEEEEHEVYGGEIP----------VEEGDIDMSAADDDAIKELDEMKKRLKEMEEEAAALREMQAKVEKEMDA


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAGGAAGAGGAACACGAGGTTTACGGCGGAGAGATCCCGGTCGAGGAGGGTGACATTGACATGTCTGCCGCCGATGACGACGCCATCAAGGAGCTGGACGAGATGAA
GAAGAGATTGAAGGAGATGGAGGAGGAAGCAGCTGCTCTTCGCGAAATGCAAGCCAAGGTAGAAAAGGAAATGGACGCCGTTCAAGGTTTACCTCCATCTCGAATTACCT
TCGACTAA
mRNA sequenceShow/hide mRNA sequence
CTGAGAGCTCTCATGGACTTGGGTTGACTCAAGCAGTCCTTTGAAACGAGTCTTTAGCCGATTTATTGTTCATTATAAAATGGTCCGCGGTTGGGCTTTATAGATTACCC
TATATATCGATCGTATTGTGGGAGCCTGTTCGGACACAATTAGGAAGAACGGAAATGGAGGAAGAGGAACACGAGGTTTACGGCGGAGAGATCCCGGTCGAGGAGGGTGA
CATTGACATGTCTGCCGCCGATGACGACGCCATCAAGGAGCTGGACGAGATGAAGAAGAGATTGAAGGAGATGGAGGAGGAAGCAGCTGCTCTTCGCGAAATGCAAGCCA
AGGTAGAAAAGGAAATGGACGCCGTTCAAGGTTTACCTCCATCTCGAATTACCTTCGACTAA
Protein sequenceShow/hide protein sequence
MEEEEHEVYGGEIPVEEGDIDMSAADDDAIKELDEMKKRLKEMEEEAAALREMQAKVEKEMDAVQGLPPSRITFD