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MELO3C008028 (gene) of Melon (DHL92) v4 genome

Gene IDMELO3C008028
OrganismCucumis melo DHL92 (Melon (DHL92) v4)
Descriptionpollen-specific leucine-rich repeat extensin-like protein 1 isoform X1
Genome locationchr08:6858120..6861223
RNA-Seq ExpressionMELO3C008028
SyntenyMELO3C008028
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAE8647470.1 hypothetical protein Csa_004096 [Cucumis sativus]1.0e-5074.14Show/hide
Query:  MGACATKPKGMKAESGEAPEELPAETKPDHVGDEKAKEIVVDDDKVDSKPRSLSNLFIDDQKEGNKEKTEGADPPEKQETNPPETEKQIDPLPEEKPSEN
        MGACATKPK +KAESG+APEELPAETKPDHVGDEKAKEIVVDDDK                KEGNKEKTE ADPPEKQETNPPETEKQI+PLPEEKPSEN
Subjt:  MGACATKPKGMKAESGEAPEELPAETKPDHVGDEKAKEIVVDDDKVDSKPRSLSNLFIDDQKEGNKEKTEGADPPEKQETNPPETEKQIDPLPEEKPSEN

Query:  NPPEPAVSDSVTENNTVISSEKLMETPNEENKEIDPKNEDKIKVEVTTENDVPPEKTESSEKPTETEKEVKVIN
        NPPEP VSDSVTEN TV      METP+E            IKVEVT ENDVPPEKTES+EKPTETEKEVKV N
Subjt:  NPPEPAVSDSVTENNTVISSEKLMETPNEENKEIDPKNEDKIKVEVTTENDVPPEKTESSEKPTETEKEVKVIN

XP_004148639.1 neurofilament medium polypeptide isoform X2 [Cucumis sativus]1.0e-5074.14Show/hide
Query:  MGACATKPKGMKAESGEAPEELPAETKPDHVGDEKAKEIVVDDDKVDSKPRSLSNLFIDDQKEGNKEKTEGADPPEKQETNPPETEKQIDPLPEEKPSEN
        MGACATKPK +KAESG+APEELPAETKPDHVGDEKAKEIVVDDDK                KEGNKEKTE ADPPEKQETNPPETEKQI+PLPEEKPSEN
Subjt:  MGACATKPKGMKAESGEAPEELPAETKPDHVGDEKAKEIVVDDDKVDSKPRSLSNLFIDDQKEGNKEKTEGADPPEKQETNPPETEKQIDPLPEEKPSEN

Query:  NPPEPAVSDSVTENNTVISSEKLMETPNEENKEIDPKNEDKIKVEVTTENDVPPEKTESSEKPTETEKEVKVIN
        NPPEP VSDSVTEN TV      METP+E            IKVEVT ENDVPPEKTES+EKPTETEKEVKV N
Subjt:  NPPEPAVSDSVTENNTVISSEKLMETPNEENKEIDPKNEDKIKVEVTTENDVPPEKTESSEKPTETEKEVKVIN

XP_008441002.1 PREDICTED: pollen-specific leucine-rich repeat extensin-like protein 1 isoform X1 [Cucumis melo]4.5e-83100Show/hide
Query:  MGACATKPKGMKAESGEAPEELPAETKPDHVGDEKAKEIVVDDDKVDSKPRSLSNLFIDDQKEGNKEKTEGADPPEKQETNPPETEKQIDPLPEEKPSEN
        MGACATKPKGMKAESGEAPEELPAETKPDHVGDEKAKEIVVDDDKVDSKPRSLSNLFIDDQKEGNKEKTEGADPPEKQETNPPETEKQIDPLPEEKPSEN
Subjt:  MGACATKPKGMKAESGEAPEELPAETKPDHVGDEKAKEIVVDDDKVDSKPRSLSNLFIDDQKEGNKEKTEGADPPEKQETNPPETEKQIDPLPEEKPSEN

Query:  NPPEPAVSDSVTENNTVISSEKLMETPNEENKEIDPKNEDKIKVEVTTENDVPPEKTESSEKPTETEKEVKVIN
        NPPEPAVSDSVTENNTVISSEKLMETPNEENKEIDPKNEDKIKVEVTTENDVPPEKTESSEKPTETEKEVKVIN
Subjt:  NPPEPAVSDSVTENNTVISSEKLMETPNEENKEIDPKNEDKIKVEVTTENDVPPEKTESSEKPTETEKEVKVIN

XP_008441003.1 PREDICTED: pollen-specific leucine-rich repeat extensin-like protein 1 isoform X2 [Cucumis melo]6.8e-7190.8Show/hide
Query:  MGACATKPKGMKAESGEAPEELPAETKPDHVGDEKAKEIVVDDDKVDSKPRSLSNLFIDDQKEGNKEKTEGADPPEKQETNPPETEKQIDPLPEEKPSEN
        MGACATKPKGMKAESGEAPEELPAETKPDHVGDEKAKEIVVDDDK                KEGNKEKTEGADPPEKQETNPPETEKQIDPLPEEKPSEN
Subjt:  MGACATKPKGMKAESGEAPEELPAETKPDHVGDEKAKEIVVDDDKVDSKPRSLSNLFIDDQKEGNKEKTEGADPPEKQETNPPETEKQIDPLPEEKPSEN

Query:  NPPEPAVSDSVTENNTVISSEKLMETPNEENKEIDPKNEDKIKVEVTTENDVPPEKTESSEKPTETEKEVKVIN
        NPPEPAVSDSVTENNTVISSEKLMETPNEENKEIDPKNEDKIKVEVTTENDVPPEKTESSEKPTETEKEVKVIN
Subjt:  NPPEPAVSDSVTENNTVISSEKLMETPNEENKEIDPKNEDKIKVEVTTENDVPPEKTESSEKPTETEKEVKVIN

XP_031744063.1 pollen-specific leucine-rich repeat extensin-like protein 1 isoform X1 [Cucumis sativus]1.7e-5880.46Show/hide
Query:  MGACATKPKGMKAESGEAPEELPAETKPDHVGDEKAKEIVVDDDKVDSKPRSLSNLFIDDQKEGNKEKTEGADPPEKQETNPPETEKQIDPLPEEKPSEN
        MGACATKPK +KAESG+APEELPAETKPDHVGDEKAKEIVVDDDKVDSKP SL++LFI  QKEGNKEKTE ADPPEKQETNPPETEKQI+PLPEEKPSEN
Subjt:  MGACATKPKGMKAESGEAPEELPAETKPDHVGDEKAKEIVVDDDKVDSKPRSLSNLFIDDQKEGNKEKTEGADPPEKQETNPPETEKQIDPLPEEKPSEN

Query:  NPPEPAVSDSVTENNTVISSEKLMETPNEENKEIDPKNEDKIKVEVTTENDVPPEKTESSEKPTETEKEVKVIN
        NPPEP VSDSVTEN TV      METP+E            IKVEVT ENDVPPEKTES+EKPTETEKEVKV N
Subjt:  NPPEPAVSDSVTENNTVISSEKLMETPNEENKEIDPKNEDKIKVEVTTENDVPPEKTESSEKPTETEKEVKVIN

TrEMBL top hitse value%identityAlignment
A0A0A0KFS6 Uncharacterized protein8.4e-5980.46Show/hide
Query:  MGACATKPKGMKAESGEAPEELPAETKPDHVGDEKAKEIVVDDDKVDSKPRSLSNLFIDDQKEGNKEKTEGADPPEKQETNPPETEKQIDPLPEEKPSEN
        MGACATKPK +KAESG+APEELPAETKPDHVGDEKAKEIVVDDDKVDSKP SL++LFI  QKEGNKEKTE ADPPEKQETNPPETEKQI+PLPEEKPSEN
Subjt:  MGACATKPKGMKAESGEAPEELPAETKPDHVGDEKAKEIVVDDDKVDSKPRSLSNLFIDDQKEGNKEKTEGADPPEKQETNPPETEKQIDPLPEEKPSEN

Query:  NPPEPAVSDSVTENNTVISSEKLMETPNEENKEIDPKNEDKIKVEVTTENDVPPEKTESSEKPTETEKEVKVIN
        NPPEP VSDSVTEN TV      METP+E            IKVEVT ENDVPPEKTES+EKPTETEKEVKV N
Subjt:  NPPEPAVSDSVTENNTVISSEKLMETPNEENKEIDPKNEDKIKVEVTTENDVPPEKTESSEKPTETEKEVKVIN

A0A1S3B2F3 pollen-specific leucine-rich repeat extensin-like protein 1 isoform X23.3e-7190.8Show/hide
Query:  MGACATKPKGMKAESGEAPEELPAETKPDHVGDEKAKEIVVDDDKVDSKPRSLSNLFIDDQKEGNKEKTEGADPPEKQETNPPETEKQIDPLPEEKPSEN
        MGACATKPKGMKAESGEAPEELPAETKPDHVGDEKAKEIVVDDDK                KEGNKEKTEGADPPEKQETNPPETEKQIDPLPEEKPSEN
Subjt:  MGACATKPKGMKAESGEAPEELPAETKPDHVGDEKAKEIVVDDDKVDSKPRSLSNLFIDDQKEGNKEKTEGADPPEKQETNPPETEKQIDPLPEEKPSEN

Query:  NPPEPAVSDSVTENNTVISSEKLMETPNEENKEIDPKNEDKIKVEVTTENDVPPEKTESSEKPTETEKEVKVIN
        NPPEPAVSDSVTENNTVISSEKLMETPNEENKEIDPKNEDKIKVEVTTENDVPPEKTESSEKPTETEKEVKVIN
Subjt:  NPPEPAVSDSVTENNTVISSEKLMETPNEENKEIDPKNEDKIKVEVTTENDVPPEKTESSEKPTETEKEVKVIN

A0A1S3B2G7 pollen-specific leucine-rich repeat extensin-like protein 1 isoform X12.2e-83100Show/hide
Query:  MGACATKPKGMKAESGEAPEELPAETKPDHVGDEKAKEIVVDDDKVDSKPRSLSNLFIDDQKEGNKEKTEGADPPEKQETNPPETEKQIDPLPEEKPSEN
        MGACATKPKGMKAESGEAPEELPAETKPDHVGDEKAKEIVVDDDKVDSKPRSLSNLFIDDQKEGNKEKTEGADPPEKQETNPPETEKQIDPLPEEKPSEN
Subjt:  MGACATKPKGMKAESGEAPEELPAETKPDHVGDEKAKEIVVDDDKVDSKPRSLSNLFIDDQKEGNKEKTEGADPPEKQETNPPETEKQIDPLPEEKPSEN

Query:  NPPEPAVSDSVTENNTVISSEKLMETPNEENKEIDPKNEDKIKVEVTTENDVPPEKTESSEKPTETEKEVKVIN
        NPPEPAVSDSVTENNTVISSEKLMETPNEENKEIDPKNEDKIKVEVTTENDVPPEKTESSEKPTETEKEVKVIN
Subjt:  NPPEPAVSDSVTENNTVISSEKLMETPNEENKEIDPKNEDKIKVEVTTENDVPPEKTESSEKPTETEKEVKVIN

A0A5A7SHD6 Pollen-specific leucine-rich repeat extensin-like protein 1 isoform X12.2e-83100Show/hide
Query:  MGACATKPKGMKAESGEAPEELPAETKPDHVGDEKAKEIVVDDDKVDSKPRSLSNLFIDDQKEGNKEKTEGADPPEKQETNPPETEKQIDPLPEEKPSEN
        MGACATKPKGMKAESGEAPEELPAETKPDHVGDEKAKEIVVDDDKVDSKPRSLSNLFIDDQKEGNKEKTEGADPPEKQETNPPETEKQIDPLPEEKPSEN
Subjt:  MGACATKPKGMKAESGEAPEELPAETKPDHVGDEKAKEIVVDDDKVDSKPRSLSNLFIDDQKEGNKEKTEGADPPEKQETNPPETEKQIDPLPEEKPSEN

Query:  NPPEPAVSDSVTENNTVISSEKLMETPNEENKEIDPKNEDKIKVEVTTENDVPPEKTESSEKPTETEKEVKVIN
        NPPEPAVSDSVTENNTVISSEKLMETPNEENKEIDPKNEDKIKVEVTTENDVPPEKTESSEKPTETEKEVKVIN
Subjt:  NPPEPAVSDSVTENNTVISSEKLMETPNEENKEIDPKNEDKIKVEVTTENDVPPEKTESSEKPTETEKEVKVIN

A0A6J1GDB0 pollen-specific leucine-rich repeat extensin-like protein 18.2e-2249.28Show/hide
Query:  MGACATKPKGMKAESGEAPEELPA----------ETK-PDHVGDEKAKEIVVDDDKVDSKPRSLSNLFIDDQKEGNKEKTEGADPPEKQ-----------
        MGACATKPK +K +SG+AP   PA          ETK  D   D +  EI VD+DKVDSKPR LS+LF D      +EKT  ADP EK+           
Subjt:  MGACATKPKGMKAESGEAPEELPA----------ETK-PDHVGDEKAKEIVVDDDKVDSKPRSLSNLFIDDQKEGNKEKTEGADPPEKQ-----------

Query:  --------ETNPPETEKQIDPLPEEKPSENNP--PEPAVSDSVTENNTVISSEKLMETPNEENKEIDPKNEDKIKVEVTTENDVPPEKTESSEKPTETEK
                ET PPETEK+I+P  EEKPSE NP  PEP VSDSVTEN   I                    E  IKVEV  EN  PPEKTES EKPTETE+
Subjt:  --------ETNPPETEKQIDPLPEEKPSENNP--PEPAVSDSVTENNTVISSEKLMETPNEENKEIDPKNEDKIKVEVTTENDVPPEKTESSEKPTETEK

Query:  EV-KVIN
         V KVI+
Subjt:  EV-KVIN

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGAGCTTGTGCCACTAAGCCGAAGGGTATGAAGGCGGAGTCCGGCGAGGCTCCGGAGGAGTTGCCGGCCGAAACCAAACCGGATCATGTCGGTGATGAAAAG
GCGAAGGAGATCGTGGTCGACGATGACAAGGTAGATTCTAAGCCTCGTTCTCTTAGTAATTTGTTCATTGATGATCAGAAAGAAGGTAATAAGGAGAAGACAGAA
GGTGCAGATCCACCGGAGAAGCAAGAGACCAACCCACCGGAAACTGAAAAGCAAATAGACCCACTACCGGAGGAGAAGCCGTCCGAAAACAACCCACCGGAGCCA
GCAGTTTCGGACTCTGTTACAGAAAACAACACTGTAATCTCATCAGAGAAATTAATGGAAACCCCAAATGAGGAAAACAAAGAAATTGACCCGAAAAATGAAGAC
AAGATCAAAGTGGAAGTTACCACTGAAAATGATGTTCCTCCGGAGAAGACAGAGTCATCGGAGAAACCAACTGAAACAGAGAAAGAAGTGAAGGTAATTAATTAA
mRNA sequenceShow/hide mRNA sequence
ACTTTCATTCATTCATTCACACACACACACACAACGACAACAGAAGAAAAAAAAAAGAAAAGATGGGAGCTTGTGCCACTAAGCCGAAGGGTATGAAGGCGGAGT
CCGGCGAGGCTCCGGAGGAGTTGCCGGCCGAAACCAAACCGGATCATGTCGGTGATGAAAAGGCGAAGGAGATCGTGGTCGACGATGACAAGGTAGATTCTAAGC
CTCGTTCTCTTAGTAATTTGTTCATTGATGATCAGAAAGAAGGTAATAAGGAGAAGACAGAAGGTGCAGATCCACCGGAGAAGCAAGAGACCAACCCACCGGAAA
CTGAAAAGCAAATAGACCCACTACCGGAGGAGAAGCCGTCCGAAAACAACCCACCGGAGCCAGCAGTTTCGGACTCTGTTACAGAAAACAACACTGTAATCTCAT
CAGAGAAATTAATGGAAACCCCAAATGAGGAAAACAAAGAAATTGACCCGAAAAATGAAGACAAGATCAAAGTGGAAGTTACCACTGAAAATGATGTTCCTCCGG
AGAAGACAGAGTCATCGGAGAAACCAACTGAAACAGAGAAAGAAGTGAAGGTAATTAATTAATAAATAATTTTCAAAACAAAAATCCCTTCATTAGTTAATTACG
CTGAGGAACCAATATCCAAATTGTTTCATTTTCGTCTTCCTTTTTTCCTTTTAGGTATGTTATGAATTATGGGGAAAAATACATACCTTCATCTTTACTTCTCTC
TTAACTACGTACTCTTTGTTTCTACTTTATGTTTCTGTCTCTGTTTCATAG
Protein sequenceShow/hide protein sequence
MGACATKPKGMKAESGEAPEELPAETKPDHVGDEKAKEIVVDDDKVDSKPRSLSNLFIDDQKEGNKEKTEGADPPEKQETNPPETEKQIDPLPEEKPSENNPPEP
AVSDSVTENNTVISSEKLMETPNEENKEIDPKNEDKIKVEVTTENDVPPEKTESSEKPTETEKEVKVIN