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MELO3C008412 (gene) of Melon (DHL92) v4 genome

Gene IDMELO3C008412
OrganismCucumis melo DHL92 (Melon (DHL92) v4)
DescriptionTy3-gypsy retrotransposon protein
Genome locationchr10:22050241..22050512
RNA-Seq ExpressionMELO3C008412
SyntenyMELO3C008412
Gene Ontology termsGO:0090481 - pyrimidine nucleotide-sugar transmembrane transport (biological process)
GO:0000139 - Golgi membrane (cellular component)
GO:0016021 - integral component of membrane (cellular component)
GO:0015165 - pyrimidine nucleotide-sugar transmembrane transporter activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0037133.1 retrotransposon protein [Cucumis melo var. makuwa]9.4e-1485.71Show/hide
Query:  ATIWVSSLWVSVDEKKGRGNEKNGVKVGVFFMRRLSFVRGGILKKERGV
        ATIWVSS WVS  EKKGRG+EKNGVKVGVF MRR  FVRGGILKKERGV
Subjt:  ATIWVSSLWVSVDEKKGRGNEKNGVKVGVFFMRRLSFVRGGILKKERGV
KAA0044825.1 transcription factor bHLH36-like [Cucumis melo var. makuwa]8.8e-1260.27Show/hide
Query:  RGRRNEKRKIKNSPATIW-VSSLWVSVDEKKGRGNEKNGVKVGVFFMRRLSFVRGGILKKERGVCVKKESDGF
        R RR E   +  S  T+  +  + VSV +KKGRG+EKNGVKVGVF M R SFVRGG+LKK+RGV VKKE +GF
Subjt:  RGRRNEKRKIKNSPATIW-VSSLWVSVDEKKGRGNEKNGVKVGVFFMRRLSFVRGGILKKERGVCVKKESDGF
KAA0048509.1 CMP-sialic acid transporter 4 isoform X2 [Cucumis melo var. makuwa]4.0e-1284.78Show/hide
Query:  MNRGRRNEKRKIKNSPATIWVSSLWVSVDEKKGRGNEKNGVKVGVF
        +N GRRNEKRKIKNSP TIWVSS WVSV EKKGRG+EKNGVKV VF
Subjt:  MNRGRRNEKRKIKNSPATIWVSSLWVSVDEKKGRGNEKNGVKVGVF
KAA0054034.1 ty3-gypsy retrotransposon protein [Cucumis melo var. makuwa]1.8e-1276Show/hide
Query:  IWVSSLWVSVDEKKGRGNEKNGVKVGVFFMRRLSFVRGGILKKERGVCVK
        +WVSS WVSV +KKGRG+EKNG KVGVF MRR SFVR GILKKE GVC++
Subjt:  IWVSSLWVSVDEKKGRGNEKNGVKVGVFFMRRLSFVRGGILKKERGVCVK
TYJ96889.1 ty3-gypsy retrotransposon protein [Cucumis melo var. makuwa]2.0e-1175Show/hide
Query:  IWVSSLWVSVDEKKGRGNEKNGVKVGVFFMRRLSFVRGGILKKERGVCVKKE
        +WVSS WVSV +KKGRG+EKNG KVGVF MRR SFVR GILKKE GV   KE
Subjt:  IWVSSLWVSVDEKKGRGNEKNGVKVGVFFMRRLSFVRGGILKKERGVCVKKE
TrEMBL top hitse value%identityAlignment
A0A5A7T2E4 Retrotransposon protein4.6e-1485.71Show/hide
Query:  ATIWVSSLWVSVDEKKGRGNEKNGVKVGVFFMRRLSFVRGGILKKERGV
        ATIWVSS WVS  EKKGRG+EKNGVKVGVF MRR  FVRGGILKKERGV
Subjt:  ATIWVSSLWVSVDEKKGRGNEKNGVKVGVFFMRRLSFVRGGILKKERGV
A0A5A7TTV0 Transcription factor bHLH36-like4.3e-1260.27Show/hide
Query:  RGRRNEKRKIKNSPATIW-VSSLWVSVDEKKGRGNEKNGVKVGVFFMRRLSFVRGGILKKERGVCVKKESDGF
        R RR E   +  S  T+  +  + VSV +KKGRG+EKNGVKVGVF M R SFVRGG+LKK+RGV VKKE +GF
Subjt:  RGRRNEKRKIKNSPATIW-VSSLWVSVDEKKGRGNEKNGVKVGVFFMRRLSFVRGGILKKERGVCVKKESDGF
A0A5A7U4Z1 CMP-sialic acid transporter 4 isoform X21.9e-1284.78Show/hide
Query:  MNRGRRNEKRKIKNSPATIWVSSLWVSVDEKKGRGNEKNGVKVGVF
        +N GRRNEKRKIKNSP TIWVSS WVSV EKKGRG+EKNGVKV VF
Subjt:  MNRGRRNEKRKIKNSPATIWVSSLWVSVDEKKGRGNEKNGVKVGVF
A0A5A7UFR0 Ty3-gypsy retrotransposon protein8.6e-1376Show/hide
Query:  IWVSSLWVSVDEKKGRGNEKNGVKVGVFFMRRLSFVRGGILKKERGVCVK
        +WVSS WVSV +KKGRG+EKNG KVGVF MRR SFVR GILKKE GVC++
Subjt:  IWVSSLWVSVDEKKGRGNEKNGVKVGVFFMRRLSFVRGGILKKERGVCVK
A0A5D3BCV7 Ty3-gypsy retrotransposon protein9.5e-1275Show/hide
Query:  IWVSSLWVSVDEKKGRGNEKNGVKVGVFFMRRLSFVRGGILKKERGVCVKKE
        +WVSS WVSV +KKGRG+EKNG KVGVF MRR SFVR GILKKE GV   KE
Subjt:  IWVSSLWVSVDEKKGRGNEKNGVKVGVFFMRRLSFVRGGILKKERGVCVKKE
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAACAGAGGGAGAAGAAACGAAAAAAGAAAGATCAAGAACTCACCAGCGACGATATGGGTCTCTTCGCTGTGGGTCTCCGTCGACGAGAAGAAAGGACGTGGA
AATGAAAAGAATGGGGTTAAGGTTGGGGTTTTTTTCATGCGTCGTTTGTCGTTCGTGAGGGGAGGGATTTTGAAGAAGGAAAGAGGAGTGTGTGTGAAGAAGGAA
AGTGATGGATTT
mRNA sequenceShow/hide mRNA sequence
ATGGGAACATAAGAAACAGAGCAGAAAGTTAAATACCCAGGGGAAGAGATGAACAGAGGGAGAAGAAACGAAAAAAGAAAGATCAAGAACTCACCAGCGACGATA
TGGGTCTCTTCGCTGTGGGTCTCCGTCGACGAGAAGAAAGGACGTGGAAATGAAAAGAATGGGGTTAAGGTTGGGGTTTTTTTCATGCGTCGTTTGTCGTTCGTG
AGGGGAGGGATTTTGAAGAAGGAAAGAGGAGTGTGTGTGAAGAAGGAAAGTGATGGATTTTG
Protein sequenceShow/hide protein sequence
MNRGRRNEKRKIKNSPATIWVSSLWVSVDEKKGRGNEKNGVKVGVFFMRRLSFVRGGILKKERGVCVKKESDGF