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MELO3C008464 (gene) of Melon (DHL92) v4 genome

Gene IDMELO3C008464
OrganismCucumis melo DHL92 (Melon (DHL92) v4)
DescriptionTranscription initiation factor TFIID subunit 11-like
Genome locationchr03:7021207..7025325
RNA-Seq ExpressionMELO3C008464
SyntenyMELO3C008464
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0066209.1 acidic repeat-containing protein [Cucumis melo var. makuwa]6.4e-8992.5Show/hide
Query:  MAEITNREEEVAFDVKRKPVDSCFQPKKERSNKIQKLEVVAGEESCSYVKNNAENGDHKGSDEEIDNVSSTVLEGKDDDGVDGASLDARDEEEDYEDEND
        MAEITNR+EEVAFD KRKP DSCFQPK+E SNKIQKLEVV GEESC+YVKNNAENGDHKGSDE+IDNVSSTVLEGKDDDGVDGASLDA DEEEDYEDE+D
Subjt:  MAEITNREEEVAFDVKRKPVDSCFQPKKERSNKIQKLEVVAGEESCSYVKNNAENGDHKGSDEEIDNVSSTVLEGKDDDGVDGASLDARDEEEDYEDEND

Query:  SEDDEKSSGKVAADRKGKGIMKDDKGKGKLIEEDDDNDEDSSDDGSDLDSDESDLSDDPLAEVDLDNILPSRTRRRTVHPGVYYVTDLANDDDDSSDSDA
        SEDDEKSSGKVAADRKGKGIMKDDKGKGKLIEEDDD+DEDSSDDGSDLDS+ESDLSDDPLAEVDLDNILPSRTRRR VHPGVY+ TDLANDDDDSSDSDA
Subjt:  SEDDEKSSGKVAADRKGKGIMKDDKGKGKLIEEDDDNDEDSSDDGSDLDSDESDLSDDPLAEVDLDNILPSRTRRRTVHPGVYYVTDLANDDDDSSDSDA

XP_004150738.1 nucleolin [Cucumis sativus]1.0e-8690Show/hide
Query:  MAEITNREEEVAFDVKRKPVDSCFQPKKERSNKIQKLEVVAGEESCSYVKNNAENGDHKGSDEEIDNVSSTVLEGKDDDGVDGASLDARDEEEDYEDEND
        MAEITNREEEVAFD KRKP DSCFQPK+ERSNKIQKLEVV GEESC+YV NNAENGDHKGSDE++DN+SSTVLEGK DDGVDGASLDA DEEEDYEDE+D
Subjt:  MAEITNREEEVAFDVKRKPVDSCFQPKKERSNKIQKLEVVAGEESCSYVKNNAENGDHKGSDEEIDNVSSTVLEGKDDDGVDGASLDARDEEEDYEDEND

Query:  SEDDEKSSGKVAADRKGKGIMKDDKGKGKLIEEDDDNDEDSSDDGSDLDSDESDLSDDPLAEVDLDNILPSRTRRRTVHPGVYYVTDLANDDDDSSDSDA
        SEDDEKSS KVA DRKGKGIMKDDKGKGKLIEEDDD+DEDSSDDGS LDS+ESDLSDDPLAEVDLDNILPSRTRRRTVHPGVY+ TDL NDDDDSSDSDA
Subjt:  SEDDEKSSGKVAADRKGKGIMKDDKGKGKLIEEDDDNDEDSSDDGSDLDSDESDLSDDPLAEVDLDNILPSRTRRRTVHPGVYYVTDLANDDDDSSDSDA

XP_008441603.1 PREDICTED: transcription initiation factor TFIID subunit 11-like [Cucumis melo]8.3e-97100Show/hide
Query:  MAEITNREEEVAFDVKRKPVDSCFQPKKERSNKIQKLEVVAGEESCSYVKNNAENGDHKGSDEEIDNVSSTVLEGKDDDGVDGASLDARDEEEDYEDEND
        MAEITNREEEVAFDVKRKPVDSCFQPKKERSNKIQKLEVVAGEESCSYVKNNAENGDHKGSDEEIDNVSSTVLEGKDDDGVDGASLDARDEEEDYEDEND
Subjt:  MAEITNREEEVAFDVKRKPVDSCFQPKKERSNKIQKLEVVAGEESCSYVKNNAENGDHKGSDEEIDNVSSTVLEGKDDDGVDGASLDARDEEEDYEDEND

Query:  SEDDEKSSGKVAADRKGKGIMKDDKGKGKLIEEDDDNDEDSSDDGSDLDSDESDLSDDPLAEVDLDNILPSRTRRRTVHPGVYYVTDLANDDDDSSDSDA
        SEDDEKSSGKVAADRKGKGIMKDDKGKGKLIEEDDDNDEDSSDDGSDLDSDESDLSDDPLAEVDLDNILPSRTRRRTVHPGVYYVTDLANDDDDSSDSDA
Subjt:  SEDDEKSSGKVAADRKGKGIMKDDKGKGKLIEEDDDNDEDSSDDGSDLDSDESDLSDDPLAEVDLDNILPSRTRRRTVHPGVYYVTDLANDDDDSSDSDA

XP_008463121.1 PREDICTED: acidic repeat-containing protein [Cucumis melo]2.0e-8791.58Show/hide
Query:  MAEITNREEEVAFDVKRKPVDSCFQPKKERSNKIQKLEVVAGEESCSYVKNNAENGDHKGSDEEIDNVSSTVLEGKDDDGVDGASLDARDEEEDYEDEND
        MAEITNR+EEVAFD KRKP DSCFQPK+E SNKIQKLEVV GEESC+YVKNNAENGDHKGSDE+IDNVSSTVLEGKDDDGVDGASLDA DEEEDYEDE+D
Subjt:  MAEITNREEEVAFDVKRKPVDSCFQPKKERSNKIQKLEVVAGEESCSYVKNNAENGDHKGSDEEIDNVSSTVLEGKDDDGVDGASLDARDEEEDYEDEND

Query:  SEDDEKSSGKVAADRKGKGIMKDDKGKGKLIEE--DDDNDEDSSDDGSDLDSDESDLSDDPLAEVDLDNILPSRTRRRTVHPGVYYVTDLANDDDDSSDS
        SEDDEKSSGKVAADRKGKGIMKDDKGKGKLIEE  DDD+DEDSSDDGSDLDS+ESDLSDDPLAEVDLDNILPSRTRRR VHPGVY+ TDLANDDDDSSDS
Subjt:  SEDDEKSSGKVAADRKGKGIMKDDKGKGKLIEE--DDDNDEDSSDDGSDLDSDESDLSDDPLAEVDLDNILPSRTRRRTVHPGVYYVTDLANDDDDSSDS

Query:  DA
        DA
Subjt:  DA

XP_038906649.1 pheromone-processing carboxypeptidase KEX1 [Benincasa hispida]5.1e-7080.1Show/hide
Query:  MAEITNREEEVAFDVKRKPVDSCFQPKKERSNKIQKLEVVAGEESCSYVKNNAENGD-HKGSDEEIDNVSSTVLEGKDDDGVDGASLDARDEEEDYEDEN
        MAE T   EEVAFD KRKP D C + K+ERSNK+QKLEVV GEESC+ VK N ENGD HK +DE IDNVSS+V EGKDDDGV GA LDA DE ED EDE+
Subjt:  MAEITNREEEVAFDVKRKPVDSCFQPKKERSNKIQKLEVVAGEESCSYVKNNAENGD-HKGSDEEIDNVSSTVLEGKDDDGVDGASLDARDEEEDYEDEN

Query:  DSEDDEKSSGKVAADRKGKGIMKDDKGKGKLIEEDDDNDEDSSDDGSDLDSDESDLSDDPLAEVDLDNILPSRTRRRTVHPGVYYVTDLANDDDDSSDSD
        DSE+ EKSSGK A DRKGKGIMKDDKGKGKLIEEDDD+DEDSSDDGS+LDS+ESDLSDDPLAEVDLDNILPSRTRRR VHPGVY+ TDL NDDDDSSDSD
Subjt:  DSEDDEKSSGKVAADRKGKGIMKDDKGKGKLIEEDDDNDEDSSDDGSDLDSDESDLSDDPLAEVDLDNILPSRTRRRTVHPGVYYVTDLANDDDDSSDSD

Query:  A
        A
Subjt:  A

TrEMBL top hitse value%identityAlignment
A0A0A0KMR8 Uncharacterized protein4.9e-8790Show/hide
Query:  MAEITNREEEVAFDVKRKPVDSCFQPKKERSNKIQKLEVVAGEESCSYVKNNAENGDHKGSDEEIDNVSSTVLEGKDDDGVDGASLDARDEEEDYEDEND
        MAEITNREEEVAFD KRKP DSCFQPK+ERSNKIQKLEVV GEESC+YV NNAENGDHKGSDE++DN+SSTVLEGK DDGVDGASLDA DEEEDYEDE+D
Subjt:  MAEITNREEEVAFDVKRKPVDSCFQPKKERSNKIQKLEVVAGEESCSYVKNNAENGDHKGSDEEIDNVSSTVLEGKDDDGVDGASLDARDEEEDYEDEND

Query:  SEDDEKSSGKVAADRKGKGIMKDDKGKGKLIEEDDDNDEDSSDDGSDLDSDESDLSDDPLAEVDLDNILPSRTRRRTVHPGVYYVTDLANDDDDSSDSDA
        SEDDEKSS KVA DRKGKGIMKDDKGKGKLIEEDDD+DEDSSDDGS LDS+ESDLSDDPLAEVDLDNILPSRTRRRTVHPGVY+ TDL NDDDDSSDSDA
Subjt:  SEDDEKSSGKVAADRKGKGIMKDDKGKGKLIEEDDDNDEDSSDDGSDLDSDESDLSDDPLAEVDLDNILPSRTRRRTVHPGVYYVTDLANDDDDSSDSDA

A0A1S3B3S7 transcription initiation factor TFIID subunit 11-like4.0e-97100Show/hide
Query:  MAEITNREEEVAFDVKRKPVDSCFQPKKERSNKIQKLEVVAGEESCSYVKNNAENGDHKGSDEEIDNVSSTVLEGKDDDGVDGASLDARDEEEDYEDEND
        MAEITNREEEVAFDVKRKPVDSCFQPKKERSNKIQKLEVVAGEESCSYVKNNAENGDHKGSDEEIDNVSSTVLEGKDDDGVDGASLDARDEEEDYEDEND
Subjt:  MAEITNREEEVAFDVKRKPVDSCFQPKKERSNKIQKLEVVAGEESCSYVKNNAENGDHKGSDEEIDNVSSTVLEGKDDDGVDGASLDARDEEEDYEDEND

Query:  SEDDEKSSGKVAADRKGKGIMKDDKGKGKLIEEDDDNDEDSSDDGSDLDSDESDLSDDPLAEVDLDNILPSRTRRRTVHPGVYYVTDLANDDDDSSDSDA
        SEDDEKSSGKVAADRKGKGIMKDDKGKGKLIEEDDDNDEDSSDDGSDLDSDESDLSDDPLAEVDLDNILPSRTRRRTVHPGVYYVTDLANDDDDSSDSDA
Subjt:  SEDDEKSSGKVAADRKGKGIMKDDKGKGKLIEEDDDNDEDSSDDGSDLDSDESDLSDDPLAEVDLDNILPSRTRRRTVHPGVYYVTDLANDDDDSSDSDA

A0A1S3CIW7 acidic repeat-containing protein9.9e-8891.58Show/hide
Query:  MAEITNREEEVAFDVKRKPVDSCFQPKKERSNKIQKLEVVAGEESCSYVKNNAENGDHKGSDEEIDNVSSTVLEGKDDDGVDGASLDARDEEEDYEDEND
        MAEITNR+EEVAFD KRKP DSCFQPK+E SNKIQKLEVV GEESC+YVKNNAENGDHKGSDE+IDNVSSTVLEGKDDDGVDGASLDA DEEEDYEDE+D
Subjt:  MAEITNREEEVAFDVKRKPVDSCFQPKKERSNKIQKLEVVAGEESCSYVKNNAENGDHKGSDEEIDNVSSTVLEGKDDDGVDGASLDARDEEEDYEDEND

Query:  SEDDEKSSGKVAADRKGKGIMKDDKGKGKLIEE--DDDNDEDSSDDGSDLDSDESDLSDDPLAEVDLDNILPSRTRRRTVHPGVYYVTDLANDDDDSSDS
        SEDDEKSSGKVAADRKGKGIMKDDKGKGKLIEE  DDD+DEDSSDDGSDLDS+ESDLSDDPLAEVDLDNILPSRTRRR VHPGVY+ TDLANDDDDSSDS
Subjt:  SEDDEKSSGKVAADRKGKGIMKDDKGKGKLIEE--DDDNDEDSSDDGSDLDSDESDLSDDPLAEVDLDNILPSRTRRRTVHPGVYYVTDLANDDDDSSDS

Query:  DA
        DA
Subjt:  DA

A0A5D3B8T5 Transcription initiation factor TFIID subunit 11-like4.0e-97100Show/hide
Query:  MAEITNREEEVAFDVKRKPVDSCFQPKKERSNKIQKLEVVAGEESCSYVKNNAENGDHKGSDEEIDNVSSTVLEGKDDDGVDGASLDARDEEEDYEDEND
        MAEITNREEEVAFDVKRKPVDSCFQPKKERSNKIQKLEVVAGEESCSYVKNNAENGDHKGSDEEIDNVSSTVLEGKDDDGVDGASLDARDEEEDYEDEND
Subjt:  MAEITNREEEVAFDVKRKPVDSCFQPKKERSNKIQKLEVVAGEESCSYVKNNAENGDHKGSDEEIDNVSSTVLEGKDDDGVDGASLDARDEEEDYEDEND

Query:  SEDDEKSSGKVAADRKGKGIMKDDKGKGKLIEEDDDNDEDSSDDGSDLDSDESDLSDDPLAEVDLDNILPSRTRRRTVHPGVYYVTDLANDDDDSSDSDA
        SEDDEKSSGKVAADRKGKGIMKDDKGKGKLIEEDDDNDEDSSDDGSDLDSDESDLSDDPLAEVDLDNILPSRTRRRTVHPGVYYVTDLANDDDDSSDSDA
Subjt:  SEDDEKSSGKVAADRKGKGIMKDDKGKGKLIEEDDDNDEDSSDDGSDLDSDESDLSDDPLAEVDLDNILPSRTRRRTVHPGVYYVTDLANDDDDSSDSDA

A0A5D3E1E7 Acidic repeat-containing protein3.1e-8992.5Show/hide
Query:  MAEITNREEEVAFDVKRKPVDSCFQPKKERSNKIQKLEVVAGEESCSYVKNNAENGDHKGSDEEIDNVSSTVLEGKDDDGVDGASLDARDEEEDYEDEND
        MAEITNR+EEVAFD KRKP DSCFQPK+E SNKIQKLEVV GEESC+YVKNNAENGDHKGSDE+IDNVSSTVLEGKDDDGVDGASLDA DEEEDYEDE+D
Subjt:  MAEITNREEEVAFDVKRKPVDSCFQPKKERSNKIQKLEVVAGEESCSYVKNNAENGDHKGSDEEIDNVSSTVLEGKDDDGVDGASLDARDEEEDYEDEND

Query:  SEDDEKSSGKVAADRKGKGIMKDDKGKGKLIEEDDDNDEDSSDDGSDLDSDESDLSDDPLAEVDLDNILPSRTRRRTVHPGVYYVTDLANDDDDSSDSDA
        SEDDEKSSGKVAADRKGKGIMKDDKGKGKLIEEDDD+DEDSSDDGSDLDS+ESDLSDDPLAEVDLDNILPSRTRRR VHPGVY+ TDLANDDDDSSDSDA
Subjt:  SEDDEKSSGKVAADRKGKGIMKDDKGKGKLIEEDDDNDEDSSDDGSDLDSDESDLSDDPLAEVDLDNILPSRTRRRTVHPGVYYVTDLANDDDDSSDSDA

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G12830.1 unknown protein5.8e-2443.78Show/hide
Query:  MAEITNREEEVAFDVKRKPVDSCFQPKKERSNKIQKLEVVAGEESCSYVKNNAENGDHK-----GSDEEIDNVSSTVLEGKDDDGVDG---ASLDARDEE
        MA++ N+++  +F VKRK  D   Q +   +NK QKL         S  K+   NG  +      S EE     S+VL  K  + V+      + A +E+
Subjt:  MAEITNREEEVAFDVKRKPVDSCFQPKKERSNKIQKLEVVAGEESCSYVKNNAENGDHK-----GSDEEIDNVSSTVLEGKDDDGVDG---ASLDARDEE

Query:  EDYEDENDSEDDEKSSGKVAADRKGKGIMKDDKGKGKLIEEDDDNDEDSSDDGSD----LDSDESDLSDDPLAEVDLDNILPSRTRRRTVHPGVYYVTDL
        ED EDE + +++E+   +V  DRKGKGI ++DKGKGK+IE ++ +DED SDD  D     + DESD SDDPLAEVDLDNILPSRTRRR+  PGV+   + 
Subjt:  EDYEDENDSEDDEKSSGKVAADRKGKGIMKDDKGKGKLIEEDDDNDEDSSDDGSD----LDSDESDLSDDPLAEVDLDNILPSRTRRRTVHPGVYYVTDL

Query:  AN-----DDDDSSDSDA
        +N     +DD+SSDSDA
Subjt:  AN-----DDDDSSDSDA


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGGAAATTACCAATAGAGAGGAGGAGGTCGCATTTGATGTGAAGCGAAAACCTGTTGATTCTTGCTTCCAACCGAAAAAGGAGCGTTCGAACAAAATTCAGAAGCT
CGAAGTGGTTGCGGGTGAAGAATCCTGTAGTTATGTGAAGAACAATGCTGAGAATGGTGATCATAAGGGAAGTGATGAAGAGATTGATAATGTTTCTTCTACGGTTCTAG
AAGGGAAGGATGACGATGGAGTTGATGGAGCTAGTTTAGACGCGAGAGATGAGGAGGAGGATTATGAGGATGAAAACGATAGTGAGGATGACGAAAAATCGAGTGGGAAA
GTGGCTGCGGATCGGAAGGGGAAGGGGATTATGAAGGATGACAAAGGAAAAGGGAAATTGATAGAGGAAGATGACGACAACGATGAGGATTCCAGTGATGATGGAAGCGA
CTTGGATTCTGATGAGAGCGATTTGTCGGATGATCCACTTGCGGAGGTCGATTTGGACAACATCCTTCCTTCAAGGACGAGGAGGCGAACGGTTCACCCTGGAGTTTATT
ACGTTACGGATTTGGCAAACGACGATGATGATAGCAGTGATAGCGATGCTTGA
mRNA sequenceShow/hide mRNA sequence
GAGAGGAAAAAAGAGAAAATTTCTCCCTTCTCCTTCTTCATTCTTCGAGAGAGGAGTTAAAAAAAAAATTCTTCTTCTTCTTCTTCTCCTCCTCGCCCATTCCCTCATCC
CATGGTCCTCTCTTCCTATTTCTCCTTCGCTCCCTTACACTCACCGTCCTTCTCTTCCATCGTCTAGCAGCCCATGGTCGACAGAAGTCCTGCCGCTGCACACTTTTGGT
TTTTATTTCGATTTGAGCTTCTCAAGAAGATCTAAGAGGCCAAATTGAAGTGGGAAAAGCTTAAAATCCCAAGGGATCGAGTAATTGATTGTTTCGAAGCTTCTTCAATT
GTGTACCGGTTTTGCGCCAAATTAAATGGCGGAAATTACCAATAGAGAGGAGGAGGTCGCATTTGATGTGAAGCGAAAACCTGTTGATTCTTGCTTCCAACCGAAAAAGG
AGCGTTCGAACAAAATTCAGAAGCTCGAAGTGGTTGCGGGTGAAGAATCCTGTAGTTATGTGAAGAACAATGCTGAGAATGGTGATCATAAGGGAAGTGATGAAGAGATT
GATAATGTTTCTTCTACGGTTCTAGAAGGGAAGGATGACGATGGAGTTGATGGAGCTAGTTTAGACGCGAGAGATGAGGAGGAGGATTATGAGGATGAAAACGATAGTGA
GGATGACGAAAAATCGAGTGGGAAAGTGGCTGCGGATCGGAAGGGGAAGGGGATTATGAAGGATGACAAAGGAAAAGGGAAATTGATAGAGGAAGATGACGACAACGATG
AGGATTCCAGTGATGATGGAAGCGACTTGGATTCTGATGAGAGCGATTTGTCGGATGATCCACTTGCGGAGGTCGATTTGGACAACATCCTTCCTTCAAGGACGAGGAGG
CGAACGGTTCACCCTGGAGTTTATTACGTTACGGATTTGGCAAACGACGATGATGATAGCAGTGATAGCGATGCTTGAAACGTTCAAGAAGGTCATTAAAATTCGGCAAT
CGAACCTTGGAGTTAGTACAACTGATATGAGTTGATGTTTCTCAGTTTTATCTTCTTTAGGGATAATGCAGCAATGTAATGAGTTACTCCAACAATTTTATTTTTAAGGT
TACATGTTTTCTTGTTTTCCCACTTTGGTATCGGTAGCATTGAGGATTGCTTGCATCTATGGCTTTCGTTAATATGCCTTTTTCTTAGAAGTTCTTATTTGTAGGGGGAT
TGTACTCATCAATCTTAATTGTAAGCCAAAATTAATAGATAGCAATGGAGTTTGTAACATTTGATTTTTCACTTATTGGATATGTTAGTGATGCCAA
Protein sequenceShow/hide protein sequence
MAEITNREEEVAFDVKRKPVDSCFQPKKERSNKIQKLEVVAGEESCSYVKNNAENGDHKGSDEEIDNVSSTVLEGKDDDGVDGASLDARDEEEDYEDENDSEDDEKSSGK
VAADRKGKGIMKDDKGKGKLIEEDDDNDEDSSDDGSDLDSDESDLSDDPLAEVDLDNILPSRTRRRTVHPGVYYVTDLANDDDDSSDSDA