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MELO3C008523 (gene) of Melon (DHL92) v4 genome

Gene IDMELO3C008523
OrganismCucumis melo DHL92 (Melon (DHL92) v4)
DescriptionGag-proteinase polyprotein
Genome locationchr05:11820513..11820909
RNA-Seq ExpressionMELO3C008523
SyntenyMELO3C008523
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0032352.1 gag-proteinase polyprotein [Cucumis melo var. makuwa]1.8e-5599.09Show/hide
Query:  QLFDSSPQLSATPRVTFDRGGGKRTTNLVIHELFKEFGTHVTHGDNSPPRFTSPIQTHDSPPPTLVHPKTGCNAGPSTMPPSMLEQLVQDSSISPIEPVR
        +LFDSSPQLSATPRVTFDRGGGKRTTNLVIHELFKEFGTHVTHGDNSPPRFTSPIQTHDSPPPTLVHPKTGCNAGPSTMPPSMLEQLVQDSSISPIEPVR
Subjt:  QLFDSSPQLSATPRVTFDRGGGKRTTNLVIHELFKEFGTHVTHGDNSPPRFTSPIQTHDSPPPTLVHPKTGCNAGPSTMPPSMLEQLVQDSSISPIEPVR

Query:  LVFVSRPRSN
        LVFVSRPRSN
Subjt:  LVFVSRPRSN
KAA0035442.1 putative mitochondrial protein [Cucumis melo var. makuwa]1.7e-0557.69Show/hide
Query:  SPPRFTSPIQTHDSPPPTLVHPKTGCNAGPSTMPPSMLEQLVQDSSISPIEP
        SP RF S I T+DSPPPTL+HP++  NA PS + PSML Q ++D+SI P +P
Subjt:  SPPRFTSPIQTHDSPPPTLVHPKTGCNAGPSTMPPSMLEQLVQDSSISPIEP
TYK31082.1 putative mitochondrial protein [Cucumis melo var. makuwa]1.7e-0557.69Show/hide
Query:  SPPRFTSPIQTHDSPPPTLVHPKTGCNAGPSTMPPSMLEQLVQDSSISPIEP
        SP RF S I T+DSPPPTL+HP++  NA PS + PSML Q ++D+SI P +P
Subjt:  SPPRFTSPIQTHDSPPPTLVHPKTGCNAGPSTMPPSMLEQLVQDSSISPIEP
TrEMBL top hitse value%identityAlignment
A0A5A7SMT6 Gag-proteinase polyprotein8.5e-5699.09Show/hide
Query:  QLFDSSPQLSATPRVTFDRGGGKRTTNLVIHELFKEFGTHVTHGDNSPPRFTSPIQTHDSPPPTLVHPKTGCNAGPSTMPPSMLEQLVQDSSISPIEPVR
        +LFDSSPQLSATPRVTFDRGGGKRTTNLVIHELFKEFGTHVTHGDNSPPRFTSPIQTHDSPPPTLVHPKTGCNAGPSTMPPSMLEQLVQDSSISPIEPVR
Subjt:  QLFDSSPQLSATPRVTFDRGGGKRTTNLVIHELFKEFGTHVTHGDNSPPRFTSPIQTHDSPPPTLVHPKTGCNAGPSTMPPSMLEQLVQDSSISPIEPVR

Query:  LVFVSRPRSN
        LVFVSRPRSN
Subjt:  LVFVSRPRSN
A0A5A7SW03 Putative mitochondrial protein8.1e-0657.69Show/hide
Query:  SPPRFTSPIQTHDSPPPTLVHPKTGCNAGPSTMPPSMLEQLVQDSSISPIEP
        SP RF S I T+DSPPPTL+HP++  NA PS + PSML Q ++D+SI P +P
Subjt:  SPPRFTSPIQTHDSPPPTLVHPKTGCNAGPSTMPPSMLEQLVQDSSISPIEP
A0A5D3E5A3 Putative mitochondrial protein8.1e-0657.69Show/hide
Query:  SPPRFTSPIQTHDSPPPTLVHPKTGCNAGPSTMPPSMLEQLVQDSSISPIEP
        SP RF S I T+DSPPPTL+HP++  NA PS + PSML Q ++D+SI P +P
Subjt:  SPPRFTSPIQTHDSPPPTLVHPKTGCNAGPSTMPPSMLEQLVQDSSISPIEP
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
AGAATCGTCAAAGAACCCCCAACCAAACAGAGTGTCTGCTGCGAAGCCGTCTATCGTCAGCTGTTTGACTCTTCGCCACAACTCTCTGCTACCCCACGAGTAACT
TTTGATCGAGGCGGGGGAAAGCGAACTACGAATTTAGTTATTCATGAGTTATTCAAGGAGTTTGGTACCCATGTAACTCATGGGGATAATTCTCCTCCTCGTTTT
ACTTCACCGATTCAAACTCATGATTCGCCTCCTCCTACTCTAGTGCACCCTAAAACTGGATGTAATGCTGGTCCATCCACTATGCCGCCTTCCATGCTAGAGCAG
CTTGTTCAAGATAGCTCTATTTCACCAATTGAGCCTGTCAGGCTTGTTTTCGTTAGCCGTCCAAGGAGCAATGTGTGGTGA
mRNA sequenceShow/hide mRNA sequence
GAGAATCGTCAAAGAACCCCCAACCAAACAGAGTGTCTGCTGCGAAGCCGTCTATCGTCAGCTGTTTGACTCTTCGCCACAACTCTCTGCTACCCCACGAGTAAC
TTTTGATCGAGGCGGGGGAAAGCGAACTACGAATTTAGTTATTCATGAGTTATTCAAGGAGTTTGGTACCCATGTAACTCATGGGGATAATTCTCCTCCTCGTTT
TACTTCACCGATTCAAACTCATGATTCGCCTCCTCCTACTCTAGTGCACCCTAAAACTGGATGTAATGCTGGTCCATCCACTATGCCGCCTTCCATGCTAGAGCA
GCTTGTTCAAGATAGCTCTATTTCACCAATTGAGCCTGTCAGGCTTGTTTTCGTTAGCCGTCCAAGGAGCAATGTGTGGTGA
Protein sequenceShow/hide protein sequence
RIVKEPPTKQSVCCEAVYRQLFDSSPQLSATPRVTFDRGGGKRTTNLVIHELFKEFGTHVTHGDNSPPRFTSPIQTHDSPPPTLVHPKTGCNAGPSTMPPSMLEQ
LVQDSSISPIEPVRLVFVSRPRSNVW