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MELO3C008636 (gene) of Melon (DHL92) v4 genome

Gene IDMELO3C008636
OrganismCucumis melo DHL92 (Melon (DHL92) v4)
DescriptionRetrovirus-related Pol polyprotein from transposon TNT 1-94
Genome locationchr05:15885033..15885290
RNA-Seq ExpressionMELO3C008636
SyntenyMELO3C008636
Gene Ontology termsGO:0015074 - DNA integration (biological process)
GO:0003676 - nucleic acid binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0040427.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. makuwa]4.2e-42100Show/hide
Query:  MKGRGGATETKRGGVDDDNKVLKWGNSRPGKKGKGKDTGLKYGRGRVNPSGACGKFDFGWRTPGVPNSLLNTIFFGTLRERFGQG
        MKGRGGATETKRGGVDDDNKVLKWGNSRPGKKGKGKDTGLKYGRGRVNPSGACGKFDFGWRTPGVPNSLLNTIFFGTLRERFGQG
Subjt:  MKGRGGATETKRGGVDDDNKVLKWGNSRPGKKGKGKDTGLKYGRGRVNPSGACGKFDFGWRTPGVPNSLLNTIFFGTLRERFGQG
TYJ98688.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. makuwa]4.2e-42100Show/hide
Query:  MKGRGGATETKRGGVDDDNKVLKWGNSRPGKKGKGKDTGLKYGRGRVNPSGACGKFDFGWRTPGVPNSLLNTIFFGTLRERFGQG
        MKGRGGATETKRGGVDDDNKVLKWGNSRPGKKGKGKDTGLKYGRGRVNPSGACGKFDFGWRTPGVPNSLLNTIFFGTLRERFGQG
Subjt:  MKGRGGATETKRGGVDDDNKVLKWGNSRPGKKGKGKDTGLKYGRGRVNPSGACGKFDFGWRTPGVPNSLLNTIFFGTLRERFGQG
TrEMBL top hitse value%identityAlignment
A0A5A7TFU1 Retrovirus-related Pol polyprotein from transposon TNT 1-942.0e-42100Show/hide
Query:  MKGRGGATETKRGGVDDDNKVLKWGNSRPGKKGKGKDTGLKYGRGRVNPSGACGKFDFGWRTPGVPNSLLNTIFFGTLRERFGQG
        MKGRGGATETKRGGVDDDNKVLKWGNSRPGKKGKGKDTGLKYGRGRVNPSGACGKFDFGWRTPGVPNSLLNTIFFGTLRERFGQG
Subjt:  MKGRGGATETKRGGVDDDNKVLKWGNSRPGKKGKGKDTGLKYGRGRVNPSGACGKFDFGWRTPGVPNSLLNTIFFGTLRERFGQG
A0A5D3BKF7 Retrovirus-related Pol polyprotein from transposon TNT 1-942.0e-42100Show/hide
Query:  MKGRGGATETKRGGVDDDNKVLKWGNSRPGKKGKGKDTGLKYGRGRVNPSGACGKFDFGWRTPGVPNSLLNTIFFGTLRERFGQG
        MKGRGGATETKRGGVDDDNKVLKWGNSRPGKKGKGKDTGLKYGRGRVNPSGACGKFDFGWRTPGVPNSLLNTIFFGTLRERFGQG
Subjt:  MKGRGGATETKRGGVDDDNKVLKWGNSRPGKKGKGKDTGLKYGRGRVNPSGACGKFDFGWRTPGVPNSLLNTIFFGTLRERFGQG
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAAGGCCGTGGTGGCGCCACTGAAACGAAGAGAGGCGGCGTCGACGACGACAATAAGGTGCTGAAATGGGGAAACAGCCGGCCTGGGAAAAAGGGAAAAGGGAAAGA
CACGGGTTTAAAGTACGGAAGAGGAAGAGTAAACCCTAGTGGGGCTTGTGGGAAGTTTGACTTCGGTTGGCGGACTCCTGGCGTTCCTAATAGTTTGCTGAACACAATTT
TTTTTGGAACCTTGAGAGAACGTTTCGGGCAGGGGTAA
mRNA sequenceShow/hide mRNA sequence
ATGAAAGGCCGTGGTGGCGCCACTGAAACGAAGAGAGGCGGCGTCGACGACGACAATAAGGTGCTGAAATGGGGAAACAGCCGGCCTGGGAAAAAGGGAAAAGGGAAAGA
CACGGGTTTAAAGTACGGAAGAGGAAGAGTAAACCCTAGTGGGGCTTGTGGGAAGTTTGACTTCGGTTGGCGGACTCCTGGCGTTCCTAATAGTTTGCTGAACACAATTT
TTTTTGGAACCTTGAGAGAACGTTTCGGGCAGGGGTAA
Protein sequenceShow/hide protein sequence
MKGRGGATETKRGGVDDDNKVLKWGNSRPGKKGKGKDTGLKYGRGRVNPSGACGKFDFGWRTPGVPNSLLNTIFFGTLRERFGQG