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MELO3C008663 (gene) of Melon (DHL92) v4 genome

Gene IDMELO3C008663
OrganismCucumis melo DHL92 (Melon (DHL92) v4)
Descriptionphotosystem I reaction center subunit IV, chloroplastic-like
Genome locationchr05:16482290..16483422
RNA-Seq ExpressionMELO3C008663
SyntenyMELO3C008663
Gene Ontology termsGO:0015979 - photosynthesis (biological process)
GO:0009535 - chloroplast thylakoid membrane (cellular component)
GO:0009538 - photosystem I reaction center (cellular component)
InterPro domainsIPR003375 - Photosystem I PsaE, reaction centre subunit IV
IPR008990 - Electron transport accessory-like domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0061399.1 photosystem I reaction center subunit IV [Cucumis melo var. makuwa]3.1e-39100Show/hide
Query:  VVIPSSTTISSSSSRLSSLAFFPKNSNSISRSSRLVIRAAASDEAAPPPPAAAPAAATAEEPKPKPAPIGPKRGAKVKILRKESYWYKDVGSVVTVDQ
        VVIPSSTTISSSSSRLSSLAFFPKNSNSISRSSRLVIRAAASDEAAPPPPAAAPAAATAEEPKPKPAPIGPKRGAKVKILRKESYWYKDVGSVVTVDQ
Subjt:  VVIPSSTTISSSSSRLSSLAFFPKNSNSISRSSRLVIRAAASDEAAPPPPAAAPAAATAEEPKPKPAPIGPKRGAKVKILRKESYWYKDVGSVVTVDQ

KAE8651724.1 hypothetical protein Csa_006032 [Cucumis sativus]1.5e-4194.64Show/hide
Query:  MAMAASNLSCIASGVVIPSSTTISSSSSRLSSLAFFPKNSNSISRSSRLVIRAAASDEAAPPPPAAAPAAATAEEPKPKPAPIGPKRGAKVKILRKESYW
        MAMAASNLSCIASGVVIPSSTTISSSSSRLSSLAFFPKNSNSISRSSRLVIR  ASDEAAPPP A AP AAT EEPKPKPAPIGPKRGAKVKILRKESYW
Subjt:  MAMAASNLSCIASGVVIPSSTTISSSSSRLSSLAFFPKNSNSISRSSRLVIRAAASDEAAPPPPAAAPAAATAEEPKPKPAPIGPKRGAKVKILRKESYW

Query:  YKDVGSVVTVDQ
        YKDVGSVVTVDQ
Subjt:  YKDVGSVVTVDQ

XP_004152807.2 photosystem I reaction center subunit IV, chloroplastic [Cucumis sativus]1.5e-4194.64Show/hide
Query:  MAMAASNLSCIASGVVIPSSTTISSSSSRLSSLAFFPKNSNSISRSSRLVIRAAASDEAAPPPPAAAPAAATAEEPKPKPAPIGPKRGAKVKILRKESYW
        MAMAASNLSCIASGVVIPSSTTISSSSSRLSSLAFFPKNSNSISRSSRLVIR  ASDEAAPPP A AP AAT EEPKPKPAPIGPKRGAKVKILRKESYW
Subjt:  MAMAASNLSCIASGVVIPSSTTISSSSSRLSSLAFFPKNSNSISRSSRLVIRAAASDEAAPPPPAAAPAAATAEEPKPKPAPIGPKRGAKVKILRKESYW

Query:  YKDVGSVVTVDQ
        YKDVGSVVTVDQ
Subjt:  YKDVGSVVTVDQ

XP_008441802.1 PREDICTED: photosystem I reaction center subunit IV, chloroplastic-like [Cucumis melo]4.4e-46100Show/hide
Query:  MAMAASNLSCIASGVVIPSSTTISSSSSRLSSLAFFPKNSNSISRSSRLVIRAAASDEAAPPPPAAAPAAATAEEPKPKPAPIGPKRGAKVKILRKESYW
        MAMAASNLSCIASGVVIPSSTTISSSSSRLSSLAFFPKNSNSISRSSRLVIRAAASDEAAPPPPAAAPAAATAEEPKPKPAPIGPKRGAKVKILRKESYW
Subjt:  MAMAASNLSCIASGVVIPSSTTISSSSSRLSSLAFFPKNSNSISRSSRLVIRAAASDEAAPPPPAAAPAAATAEEPKPKPAPIGPKRGAKVKILRKESYW

Query:  YKDVGSVVTVDQ
        YKDVGSVVTVDQ
Subjt:  YKDVGSVVTVDQ

XP_038889433.1 photosystem I reaction center subunit IV, chloroplastic-like [Benincasa hispida]3.7e-45100Show/hide
Query:  MAASNLSCIASGVVIPSSTTISSSSSRLSSLAFFPKNSNSISRSSRLVIRAAASDEAAPPPPAAAPAAATAEEPKPKPAPIGPKRGAKVKILRKESYWYK
        MAASNLSCIASGVVIPSSTTISSSSSRLSSLAFFPKNSNSISRSSRLVIRAAASDEAAPPPPAAAPAAATAEEPKPKPAPIGPKRGAKVKILRKESYWYK
Subjt:  MAASNLSCIASGVVIPSSTTISSSSSRLSSLAFFPKNSNSISRSSRLVIRAAASDEAAPPPPAAAPAAATAEEPKPKPAPIGPKRGAKVKILRKESYWYK

Query:  DVGSVVTVDQ
        DVGSVVTVDQ
Subjt:  DVGSVVTVDQ

TrEMBL top hitse value%identityAlignment
A0A0A0LJQ1 Uncharacterized protein7.1e-4294.64Show/hide
Query:  MAMAASNLSCIASGVVIPSSTTISSSSSRLSSLAFFPKNSNSISRSSRLVIRAAASDEAAPPPPAAAPAAATAEEPKPKPAPIGPKRGAKVKILRKESYW
        MAMAASNLSCIASGVVIPSSTTISSSSSRLSSLAFFPKNSNSISRSSRLVIR  ASDEAAPPP A AP AAT EEPKPKPAPIGPKRGAKVKILRKESYW
Subjt:  MAMAASNLSCIASGVVIPSSTTISSSSSRLSSLAFFPKNSNSISRSSRLVIRAAASDEAAPPPPAAAPAAATAEEPKPKPAPIGPKRGAKVKILRKESYW

Query:  YKDVGSVVTVDQ
        YKDVGSVVTVDQ
Subjt:  YKDVGSVVTVDQ

A0A1S3B3T3 photosystem I reaction center subunit IV, chloroplastic-like2.1e-46100Show/hide
Query:  MAMAASNLSCIASGVVIPSSTTISSSSSRLSSLAFFPKNSNSISRSSRLVIRAAASDEAAPPPPAAAPAAATAEEPKPKPAPIGPKRGAKVKILRKESYW
        MAMAASNLSCIASGVVIPSSTTISSSSSRLSSLAFFPKNSNSISRSSRLVIRAAASDEAAPPPPAAAPAAATAEEPKPKPAPIGPKRGAKVKILRKESYW
Subjt:  MAMAASNLSCIASGVVIPSSTTISSSSSRLSSLAFFPKNSNSISRSSRLVIRAAASDEAAPPPPAAAPAAATAEEPKPKPAPIGPKRGAKVKILRKESYW

Query:  YKDVGSVVTVDQ
        YKDVGSVVTVDQ
Subjt:  YKDVGSVVTVDQ

A0A5A7V6V9 Photosystem I reaction center subunit IV1.5e-39100Show/hide
Query:  VVIPSSTTISSSSSRLSSLAFFPKNSNSISRSSRLVIRAAASDEAAPPPPAAAPAAATAEEPKPKPAPIGPKRGAKVKILRKESYWYKDVGSVVTVDQ
        VVIPSSTTISSSSSRLSSLAFFPKNSNSISRSSRLVIRAAASDEAAPPPPAAAPAAATAEEPKPKPAPIGPKRGAKVKILRKESYWYKDVGSVVTVDQ
Subjt:  VVIPSSTTISSSSSRLSSLAFFPKNSNSISRSSRLVIRAAASDEAAPPPPAAAPAAATAEEPKPKPAPIGPKRGAKVKILRKESYWYKDVGSVVTVDQ

A0A6J1FC09 photosystem I reaction center subunit IV, chloroplastic-like2.5e-3484.55Show/hide
Query:  MAASNLSCIASGVVIPSSTTISSSSSRLSSLAFFPKNSNSISRSSRLVIRAAASDEAAPPPPAAAPAAATAEEPKPKPAPIGPKRGAKVKILRKESYWYK
        MAASNLSCIASGV+IPSSTTI SSSSR SS+AFFPKNS SISRS RLV+RAAA + AAPPP AAA A A AE PKPKPAPIGPKRG KVKILR+ESYWYK
Subjt:  MAASNLSCIASGVVIPSSTTISSSSSRLSSLAFFPKNSNSISRSSRLVIRAAASDEAAPPPPAAAPAAATAEEPKPKPAPIGPKRGAKVKILRKESYWYK

Query:  DVGSVVTVDQ
        DVGSVVTVDQ
Subjt:  DVGSVVTVDQ

A0A6J1HLT8 photosystem I reaction center subunit IV, chloroplastic-like1.6e-3383.64Show/hide
Query:  MAASNLSCIASGVVIPSSTTISSSSSRLSSLAFFPKNSNSISRSSRLVIRAAASDEAAPPPPAAAPAAATAEEPKPKPAPIGPKRGAKVKILRKESYWYK
        MAASNLSCIASGV+IPSS TI SSSSR SS+AFFPKNS SISRS RLV+RAAA + AAPPP AAA A A AE PKPKPAPIGPKRG KVKILR+ESYWYK
Subjt:  MAASNLSCIASGVVIPSSTTISSSSSRLSSLAFFPKNSNSISRSSRLVIRAAASDEAAPPPPAAAPAAATAEEPKPKPAPIGPKRGAKVKILRKESYWYK

Query:  DVGSVVTVDQ
        DVGSVVTVDQ
Subjt:  DVGSVVTVDQ

SwissProt top hitse value%identityAlignment
P12354 Photosystem I reaction center subunit IV, chloroplastic5.7e-1256.18Show/hide
Query:  SSSSSRLSSLAFFPKNSNSISRSSRLVIRAAASDEAAPPPPAAAPAAATAEEPKPKPAPIGPKRGAKVKILRKESYWYKDVGSVVTVDQ
        SS + RL      P  + S  RS+RLV+RAA  +EAA  P AA+P    A +   KP PIGPKRG+KV+I+RKESYWYK VGSVV VDQ
Subjt:  SSSSSRLSSLAFFPKNSNSISRSSRLVIRAAASDEAAPPPPAAAPAAATAEEPKPKPAPIGPKRGAKVKILRKESYWYKDVGSVVTVDQ

Q41228 Photosystem I reaction center subunit IV A, chloroplastic3.3e-1247.27Show/hide
Query:  MAASNLSCIASGVVIPSSTTISSSSSRLSSLAFFPKNSNSISRSSRLVIRAAASDEAAPPPPAAAPAAATAEEPKPKPAPIGPKRGAKVKILRKESYWYK
        MA+ N++  AS  ++ +    S++++  +++ FF  + N  S + RLV+RAA  +EAAPP  AA    A A     KP PIGPKRG KV+ILRKESYWYK
Subjt:  MAASNLSCIASGVVIPSSTTISSSSSRLSSLAFFPKNSNSISRSSRLVIRAAASDEAAPPPPAAAPAAATAEEPKPKPAPIGPKRGAKVKILRKESYWYK

Query:  DVGSVVTVDQ
          GSVV  DQ
Subjt:  DVGSVVTVDQ

Q41229 Photosystem I reaction center subunit IV B, chloroplastic1.0e-1349.12Show/hide
Query:  MAASNLSCIASGVVIPSSTTISSSSSRLSSLAFFPKNSNSISRS-SRLVIRAAASDEAAPPPPAAAPAAATAEEP---KPKPAPIGPKRGAKVKILRKES
        MA+S+++  ASG ++ +    +S+++  +S+ FF  + N+ + +  RLV+RAA  +EAAPP   AA A A  E P     KP PIGPKRG KV++LRKES
Subjt:  MAASNLSCIASGVVIPSSTTISSSSSRLSSLAFFPKNSNSISRS-SRLVIRAAASDEAAPPPPAAAPAAATAEEP---KPKPAPIGPKRGAKVKILRKES

Query:  YWYKDVGSVVTVDQ
        YWYK VGSVV VDQ
Subjt:  YWYKDVGSVVTVDQ

Q9S714 Photosystem I reaction center subunit IV B, chloroplastic1.2e-0946.09Show/hide
Query:  LSCIASGVVIPSSTTIS---SSSSRLSSLAFFPKNSNSISRSSRLVIRAA-------ASDEAAPPPPAAAPAAATAEEPKPKPAPIGPKRGAKVKILRKE
        ++  A+G ++ ++   +    SS   + ++F P      S  SRLV+RAA       AS +++    AAAPA   A   K KP PIGPKRG+KVKILRKE
Subjt:  LSCIASGVVIPSSTTIS---SSSSRLSSLAFFPKNSNSISRSSRLVIRAA-------ASDEAAPPPPAAAPAAATAEEPKPKPAPIGPKRGAKVKILRKE

Query:  SYWYKDVGSVVTVDQ
        SYWYK+VGSVV VDQ
Subjt:  SYWYKDVGSVVTVDQ

Q9S831 Photosystem I reaction center subunit IV A, chloroplastic5.1e-1352.88Show/hide
Query:  VIPSS-TTISSSSSRLSSLAFFPKNSNSISRSSRLVIRA------AASDEAAPPPPAAAPAAATAEEPKPKPAPIGPKRGAKVKILRKESYWYKDVGSVV
        V+P++ T+++ +SS  SS++F P      +  SRLV+RA      A+S     P  AAAP  ATA   KPKP PIGPKRG+KVKILR+ESYW+K+VGSVV
Subjt:  VIPSS-TTISSSSSRLSSLAFFPKNSNSISRSSRLVIRA------AASDEAAPPPPAAAPAAATAEEPKPKPAPIGPKRGAKVKILRKESYWYKDVGSVV

Query:  TVDQ
         VDQ
Subjt:  TVDQ

Arabidopsis top hitse value%identityAlignment
AT2G20260.1 photosystem I subunit E-28.4e-1146.09Show/hide
Query:  LSCIASGVVIPSSTTIS---SSSSRLSSLAFFPKNSNSISRSSRLVIRAA-------ASDEAAPPPPAAAPAAATAEEPKPKPAPIGPKRGAKVKILRKE
        ++  A+G ++ ++   +    SS   + ++F P      S  SRLV+RAA       AS +++    AAAPA   A   K KP PIGPKRG+KVKILRKE
Subjt:  LSCIASGVVIPSSTTIS---SSSSRLSSLAFFPKNSNSISRSSRLVIRAA-------ASDEAAPPPPAAAPAAATAEEPKPKPAPIGPKRGAKVKILRKE

Query:  SYWYKDVGSVVTVDQ
        SYWYK+VGSVV VDQ
Subjt:  SYWYKDVGSVVTVDQ

AT4G28750.1 Photosystem I reaction centre subunit IV / PsaE protein3.6e-1452.88Show/hide
Query:  VIPSS-TTISSSSSRLSSLAFFPKNSNSISRSSRLVIRA------AASDEAAPPPPAAAPAAATAEEPKPKPAPIGPKRGAKVKILRKESYWYKDVGSVV
        V+P++ T+++ +SS  SS++F P      +  SRLV+RA      A+S     P  AAAP  ATA   KPKP PIGPKRG+KVKILR+ESYW+K+VGSVV
Subjt:  VIPSS-TTISSSSSRLSSLAFFPKNSNSISRSSRLVIRA------AASDEAAPPPPAAAPAAATAEEPKPKPAPIGPKRGAKVKILRKESYWYKDVGSVV

Query:  TVDQ
         VDQ
Subjt:  TVDQ


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCAATGGCTGCCTCTAACCTTTCTTGCATTGCTTCTGGAGTTGTCATCCCTTCTTCAACTACCATTTCTTCTTCCTCTTCTAGGTTATCTTCTTTGGCCTTCTTCCC
CAAGAATTCCAATTCTATTTCAAGATCTTCTCGATTGGTTATCCGTGCCGCCGCCTCCGACGAGGCTGCTCCCCCACCCCCTGCTGCCGCCCCCGCTGCCGCCACCGCCG
AAGAGCCCAAGCCCAAGCCTGCCCCTATTGGTCCCAAAAGAGGTGCCAAGGTGAAGATTTTAAGGAAAGAATCTTACTGGTACAAGGATGTTGGATCTGTTGTAACAGTT
GACCAGGTTAGACCCTTTAATTTTTATTTATTCAAGATTTTTGTTTCATATTCATTCCTTTTAGAACGATAA
mRNA sequenceShow/hide mRNA sequence
TGGTTATCATTTTTTCATTTGGGTTTATCTCTTCATCTTCCAAAGCATTAACATATTGTTGATTCATCAGTTAAAGAGCATAGAGCAAAACGGAAATTGAAAGACCAAAG
GGCAATGGCAATGGCTGCCTCTAACCTTTCTTGCATTGCTTCTGGAGTTGTCATCCCTTCTTCAACTACCATTTCTTCTTCCTCTTCTAGGTTATCTTCTTTGGCCTTCT
TCCCCAAGAATTCCAATTCTATTTCAAGATCTTCTCGATTGGTTATCCGTGCCGCCGCCTCCGACGAGGCTGCTCCCCCACCCCCTGCTGCCGCCCCCGCTGCCGCCACC
GCCGAAGAGCCCAAGCCCAAGCCTGCCCCTATTGGTCCCAAAAGAGGTGCCAAGGTGAAGATTTTAAGGAAAGAATCTTACTGGTACAAGGATGTTGGATCTGTTGTAAC
AGTTGACCAGGTTAGACCCTTTAATTTTTATTTATTCAAGATTTTTGTTTCATATTCATTCCTTTTAGAACGATAAATCAAGTGGCTAACTATGTCCTGTTTAAGGGTTA
ATTAGGTTGCTGTATTTAATTAGGGATTGAGATTGTGCATATTTGATGTTACAACTAATATAATGTAGATATGTACTAATGGTTAATATATGTACGAATCAAACTTTGCA
GGATCCCAACACTCGATATCCAGTTGTGGTTAGATTTAACAAAGTAAATTATGCAAGTGTATCAACAAACAACTATGCACTTGATGAGATTGAAGAAGTTGCTTAAGCTT
TTTTAGTTTGCTTGTGTATTTTTGAGTTAAAAATGTTTGTATAATACTCCAATTTCAATCTATTTCTTCCCTCTCTCCATGACTGTGTGTTTACTGATTCTAAACACAAT
TTCTCTTCCCTTTTGCTTATATGGTTCACAGCAATCAGAATTTTCCAGTGCTTCTAATTTTAGGAGATTAAAATGGTTTTACTTTCACAAGATTCTGCTTCTACAGTGTA
CAAGCAAGGGAAACCAATTGTGGAAGTTTGAATTGATCTCTTTTTTTCTTTTT
Protein sequenceShow/hide protein sequence
MAMAASNLSCIASGVVIPSSTTISSSSSRLSSLAFFPKNSNSISRSSRLVIRAAASDEAAPPPPAAAPAAATAEEPKPKPAPIGPKRGAKVKILRKESYWYKDVGSVVTV
DQVRPFNFYLFKIFVSYSFLLER