; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

MELO3C008948 (gene) of Melon (DHL92) v4 genome

Gene IDMELO3C008948
OrganismCucumis melo DHL92 (Melon (DHL92) v4)
DescriptionRetrotrans_gag domain-containing protein
Genome locationchr08:21675810..21676178
RNA-Seq ExpressionMELO3C008948
SyntenyMELO3C008948
Gene Ontology termsGO:0006259 - DNA metabolic process (biological process)
GO:0004518 - nuclease activity (molecular function)
GO:0016779 - nucleotidyltransferase activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
GAV85156.1 LOW QUALITY PROTEIN: hypothetical protein CFOL_v3_28594, partial [Cephalotus follicularis]4.2e-1148.31Show/hide
Query:  IDKANARISNANEE----LRLVETNSSATKNMTATKLKIPEPKTFNGSRKAKELENFLWDIEKYFKAAHIPKQGREGMASIYLYGHTKL
        I+ A  +   ANEE    L+    +SS+     ++K K+PEPK F+G R AKELENFLWD+E YFKA H+P   +  + SIYL G TKL
Subjt:  IDKANARISNANEE----LRLVETNSSATKNMTATKLKIPEPKTFNGSRKAKELENFLWDIEKYFKAAHIPKQGREGMASIYLYGHTKL

PON72985.1 hypothetical protein PanWU01x14_061350, partial [Parasponia andersonii]1.5e-1145.05Show/hide
Query:  LLHNIKFKIDKANARISNANEELRLVE----TNSSATKNMTATKLKIPEPKTFNGSRKAKELENFLWDIEKYFKAAHIPKQGREGMASIYL
        LL  +    D+  AR+++  E++ L++      SS+++N   +KLK+PEPK F GSR AKELENFLWD+E+YFKAAH+  + +  + S+YL
Subjt:  LLHNIKFKIDKANARISNANEELRLVE----TNSSATKNMTATKLKIPEPKTFNGSRKAKELENFLWDIEKYFKAAHIPKQGREGMASIYL

RWR97242.1 hypothetical protein CKAN_02666400 [Cinnamomum micranthum f. kanehirae]5.0e-1257.14Show/hide
Query:  RLVETNSSATKNMTATKLKIPEPKTFNGSRKAKELENFLWDIEKYFKAAHIPKQGREGMASIYLYGHTKL
        R + TN SA +N    ++K+PEPK F G+R AKELENFLWD+E+YF AAHIP + R  + S+YLYG  KL
Subjt:  RLVETNSSATKNMTATKLKIPEPKTFNGSRKAKELENFLWDIEKYFKAAHIPKQGREGMASIYLYGHTKL

TXG47935.1 hypothetical protein EZV62_027229 [Acer yangbiense]1.1e-1153.52Show/hide
Query:  LRLVETNSSATKNMTATKLKIPEPKTFNGSRKAKELENFLWDIEKYFKAAHIPKQGREGMASIYLYGHTKL
        LR    N + ++    +K+K+PEPK FNGSR AKELENFLWD+E+YFKAA IP + +  + S+YL G  KL
Subjt:  LRLVETNSSATKNMTATKLKIPEPKTFNGSRKAKELENFLWDIEKYFKAAHIPKQGREGMASIYLYGHTKL

VFQ93371.1 unnamed protein product [Cuscuta campestris]5.5e-1142.71Show/hide
Query:  LHNIKFKIDKANARISNANEELRLVETNSSAT----KNMTATKLKIPEPKTFNGSRKAKELENFLWDIEKYFKAAHIPKQGREGMASIYLYGHTKL
        LH++   ++   A  ++   E  +++   SAT     ++  +K+K+PEPK F+G+R AKELENFLWD+E+YFKAA IP+  +  +AS+YL G  KL
Subjt:  LHNIKFKIDKANARISNANEELRLVETNSSAT----KNMTATKLKIPEPKTFNGSRKAKELENFLWDIEKYFKAAHIPKQGREGMASIYLYGHTKL

TrEMBL top hitse value%identityAlignment
A0A2P5DIB5 Uncharacterized protein (Fragment)7.1e-1245.05Show/hide
Query:  LLHNIKFKIDKANARISNANEELRLVE----TNSSATKNMTATKLKIPEPKTFNGSRKAKELENFLWDIEKYFKAAHIPKQGREGMASIYL
        LL  +    D+  AR+++  E++ L++      SS+++N   +KLK+PEPK F GSR AKELENFLWD+E+YFKAAH+  + +  + S+YL
Subjt:  LLHNIKFKIDKANARISNANEELRLVE----TNSSATKNMTATKLKIPEPKTFNGSRKAKELENFLWDIEKYFKAAHIPKQGREGMASIYL

A0A443Q2H8 Retrotrans_gag domain-containing protein2.4e-1257.14Show/hide
Query:  RLVETNSSATKNMTATKLKIPEPKTFNGSRKAKELENFLWDIEKYFKAAHIPKQGREGMASIYLYGHTKL
        R + TN SA +N    ++K+PEPK F G+R AKELENFLWD+E+YF AAHIP + R  + S+YLYG  KL
Subjt:  RLVETNSSATKNMTATKLKIPEPKTFNGSRKAKELENFLWDIEKYFKAAHIPKQGREGMASIYLYGHTKL

A0A5C7GTM9 Retrotrans_gag domain-containing protein5.4e-1253.52Show/hide
Query:  LRLVETNSSATKNMTATKLKIPEPKTFNGSRKAKELENFLWDIEKYFKAAHIPKQGREGMASIYLYGHTKL
        LR    N + ++    +K+K+PEPK FNGSR AKELENFLWD+E+YFKAA IP + +  + S+YL G  KL
Subjt:  LRLVETNSSATKNMTATKLKIPEPKTFNGSRKAKELENFLWDIEKYFKAAHIPKQGREGMASIYLYGHTKL

A0A7N2LH98 Uncharacterized protein1.6e-1162.5Show/hide
Query:  ATKLKIPEPKTFNGSRKAKELENFLWDIEKYFKAAHIPKQGREGMASIYLYGHTKL
        ATK+K+PEPK FNG+R AK+LENFLWD+E+YFKAA +P Q    + S+YL G  KL
Subjt:  ATKLKIPEPKTFNGSRKAKELENFLWDIEKYFKAAHIPKQGREGMASIYLYGHTKL

A0A7N2R543 Uncharacterized protein1.6e-1162.5Show/hide
Query:  ATKLKIPEPKTFNGSRKAKELENFLWDIEKYFKAAHIPKQGREGMASIYLYGHTKL
        ATK+K+PEPK FNG+R AK+LENFLWD+E+YFKAA +P Q    + S+YL G  KL
Subjt:  ATKLKIPEPKTFNGSRKAKELENFLWDIEKYFKAAHIPKQGREGMASIYLYGHTKL

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTTTCAAGTAAATCCAGACTTCCTCTACTACCTTCATGGCAGACATAGAGCAACGCTTCAATACGATGTTGGAAGAGATATCTTCTTACTCCATAACATTAAGTTCAA
AATTGATAAAGCAAATGCAAGAATCAGCAATGCAAATGAGGAGCTTAGACTTGTCGAGACAAACAGCTCTGCCACAAAAAACATGACTGCTACTAAGTTAAAGATTCCTG
AACCTAAAACATTTAATGGTTCAAGGAAAGCTAAGGAGTTGGAAAATTTCCTATGGGATATTGAGAAGTACTTCAAAGCCGCACACATCCCGAAACAAGGTAGGGAGGGA
ATGGCAAGCATTTATCTTTATGGGCACACCAAGTTGTAG
mRNA sequenceShow/hide mRNA sequence
ATGTTTCAAGTAAATCCAGACTTCCTCTACTACCTTCATGGCAGACATAGAGCAACGCTTCAATACGATGTTGGAAGAGATATCTTCTTACTCCATAACATTAAGTTCAA
AATTGATAAAGCAAATGCAAGAATCAGCAATGCAAATGAGGAGCTTAGACTTGTCGAGACAAACAGCTCTGCCACAAAAAACATGACTGCTACTAAGTTAAAGATTCCTG
AACCTAAAACATTTAATGGTTCAAGGAAAGCTAAGGAGTTGGAAAATTTCCTATGGGATATTGAGAAGTACTTCAAAGCCGCACACATCCCGAAACAAGGTAGGGAGGGA
ATGGCAAGCATTTATCTTTATGGGCACACCAAGTTGTAG
Protein sequenceShow/hide protein sequence
MFQVNPDFLYYLHGRHRATLQYDVGRDIFLLHNIKFKIDKANARISNANEELRLVETNSSATKNMTATKLKIPEPKTFNGSRKAKELENFLWDIEKYFKAAHIPKQGREG
MASIYLYGHTKL