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MELO3C008976 (gene) of Melon (DHL92) v4 genome

Gene IDMELO3C008976
OrganismCucumis melo DHL92 (Melon (DHL92) v4)
DescriptionRetrotransposon protein
Genome locationchr08:20751830..20752064
RNA-Seq ExpressionMELO3C008976
SyntenyMELO3C008976
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0048405.1 retrotransposon protein [Cucumis melo var. makuwa]6.9e-2069.74Show/hide
Query:  MYAHPDLLARLRVGSDRVNQRGRGEVSERSSLKSYIWCWSVRTTNSERLRSGLHASLPMITLCARNSSAYYVRCRN
        MY HPDLLA  RVGSD+V++RGRGEVSE SSLK YIW  + +T+NS RLRSG HA+L M T CARN SAY VRC+N
Subjt:  MYAHPDLLARLRVGSDRVNQRGRGEVSERSSLKSYIWCWSVRTTNSERLRSGLHASLPMITLCARNSSAYYVRCRN

KAA0056563.1 retrotransposon protein [Cucumis melo var. makuwa]2.6e-1968.42Show/hide
Query:  MYAHPDLLARLRVGSDRVNQRGRGEVSERSSLKSYIWCWSVRTTNSERLRSGLHASLPMITLCARNSSAYYVRCRN
        MY HPDLLA  RVG D+V++RGRGEVSE SSLK YIW  + +T+NS RLRSG HA+L M T CARN SAY VRC+N
Subjt:  MYAHPDLLARLRVGSDRVNQRGRGEVSERSSLKSYIWCWSVRTTNSERLRSGLHASLPMITLCARNSSAYYVRCRN

KAA0062452.1 hypothetical protein E6C27_scaffold130G00330 [Cucumis melo var. makuwa]5.9e-1967.11Show/hide
Query:  MYAHPDLLARLRVGSDRVNQRGRGEVSERSSLKSYIWCWSVRTTNSERLRSGLHASLPMITLCARNSSAYYVRCRN
        MY HPDLLA  RVG D+V++RGRGEVSE SSLK YIW  + +T+NS RLRSG HA+L M T CARN  AY+VRC N
Subjt:  MYAHPDLLARLRVGSDRVNQRGRGEVSERSSLKSYIWCWSVRTTNSERLRSGLHASLPMITLCARNSSAYYVRCRN

TYK08719.1 hypothetical protein E5676_scaffold76G00220 [Cucumis melo var. makuwa]6.9e-2069.74Show/hide
Query:  MYAHPDLLARLRVGSDRVNQRGRGEVSERSSLKSYIWCWSVRTTNSERLRSGLHASLPMITLCARNSSAYYVRCRN
        MY HPDLLA  RVGSD+V++RGRGEVSE SSLK YIW  + +T+NS RLRSG HA+L M T CARN SAY VRC+N
Subjt:  MYAHPDLLARLRVGSDRVNQRGRGEVSERSSLKSYIWCWSVRTTNSERLRSGLHASLPMITLCARNSSAYYVRCRN

TYK23166.1 retrotransposon protein [Cucumis melo var. makuwa]2.2e-2172.37Show/hide
Query:  MYAHPDLLARLRVGSDRVNQRGRGEVSERSSLKSYIWCWSVRTTNSERLRSGLHASLPMITLCARNSSAYYVRCRN
        MY H DLLA  RVGSDRV++RGRGE SER+S KS+IW  SVRTTNS RLRSGLHA L M T+C+RNS AY VRC+N
Subjt:  MYAHPDLLARLRVGSDRVNQRGRGEVSERSSLKSYIWCWSVRTTNSERLRSGLHASLPMITLCARNSSAYYVRCRN

TrEMBL top hitse value%identityAlignment
A0A5A7U437 Retrotransposon protein3.4e-2069.74Show/hide
Query:  MYAHPDLLARLRVGSDRVNQRGRGEVSERSSLKSYIWCWSVRTTNSERLRSGLHASLPMITLCARNSSAYYVRCRN
        MY HPDLLA  RVGSD+V++RGRGEVSE SSLK YIW  + +T+NS RLRSG HA+L M T CARN SAY VRC+N
Subjt:  MYAHPDLLARLRVGSDRVNQRGRGEVSERSSLKSYIWCWSVRTTNSERLRSGLHASLPMITLCARNSSAYYVRCRN

A0A5A7UL03 Retrotransposon protein1.3e-1968.42Show/hide
Query:  MYAHPDLLARLRVGSDRVNQRGRGEVSERSSLKSYIWCWSVRTTNSERLRSGLHASLPMITLCARNSSAYYVRCRN
        MY HPDLLA  RVG D+V++RGRGEVSE SSLK YIW  + +T+NS RLRSG HA+L M T CARN SAY VRC+N
Subjt:  MYAHPDLLARLRVGSDRVNQRGRGEVSERSSLKSYIWCWSVRTTNSERLRSGLHASLPMITLCARNSSAYYVRCRN

A0A5A7V2L2 Uncharacterized protein2.8e-1967.11Show/hide
Query:  MYAHPDLLARLRVGSDRVNQRGRGEVSERSSLKSYIWCWSVRTTNSERLRSGLHASLPMITLCARNSSAYYVRCRN
        MY HPDLLA  RVG D+V++RGRGEVSE SSLK YIW  + +T+NS RLRSG HA+L M T CARN  AY+VRC N
Subjt:  MYAHPDLLARLRVGSDRVNQRGRGEVSERSSLKSYIWCWSVRTTNSERLRSGLHASLPMITLCARNSSAYYVRCRN

A0A5D3CED6 Uncharacterized protein3.4e-2069.74Show/hide
Query:  MYAHPDLLARLRVGSDRVNQRGRGEVSERSSLKSYIWCWSVRTTNSERLRSGLHASLPMITLCARNSSAYYVRCRN
        MY HPDLLA  RVGSD+V++RGRGEVSE SSLK YIW  + +T+NS RLRSG HA+L M T CARN SAY VRC+N
Subjt:  MYAHPDLLARLRVGSDRVNQRGRGEVSERSSLKSYIWCWSVRTTNSERLRSGLHASLPMITLCARNSSAYYVRCRN

A0A5D3DHQ9 Retrotransposon protein1.0e-2172.37Show/hide
Query:  MYAHPDLLARLRVGSDRVNQRGRGEVSERSSLKSYIWCWSVRTTNSERLRSGLHASLPMITLCARNSSAYYVRCRN
        MY H DLLA  RVGSDRV++RGRGE SER+S KS+IW  SVRTTNS RLRSGLHA L M T+C+RNS AY VRC+N
Subjt:  MYAHPDLLARLRVGSDRVNQRGRGEVSERSSLKSYIWCWSVRTTNSERLRSGLHASLPMITLCARNSSAYYVRCRN

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTACGCGCACCCTGACCTTCTCGCCCGTCTGAGGGTAGGGTCGGATCGAGTGAATCAAAGAGGAAGAGGGGAAGTCAGCGAGAGGTCAAGCTTGAAGTCATACATATG
GTGTTGGAGTGTACGAACGACCAACTCAGAAAGATTGCGGAGTGGCCTGCACGCGTCGTTGCCAATGATAACCTTGTGCGCCAGGAATTCATCTGCATATTACGTGAGAT
GCCGAAACTAA
mRNA sequenceShow/hide mRNA sequence
GAGAATGTACGCGCACCCTGACCTTCTCGCCCGTCTGAGGGTAGGGTCGGATCGAGTGAATCAAAGAGGAAGAGGGGAAGTCAGCGAGAGGTCAAGCTTGAAGTCATACA
TATGGTGTTGGAGTGTACGAACGACCAACTCAGAAAGATTGCGGAGTGGCCTGCACGCGTCGTTGCCAATGATAACCTTGTGCGCCAGGAATTCATCTGCATATTACGTG
AGATGCCGAAACTAA
Protein sequenceShow/hide protein sequence
MYAHPDLLARLRVGSDRVNQRGRGEVSERSSLKSYIWCWSVRTTNSERLRSGLHASLPMITLCARNSSAYYVRCRN