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MELO3C009040 (gene) of Melon (DHL92) v4 genome

Gene IDMELO3C009040
OrganismCucumis melo DHL92 (Melon (DHL92) v4)
DescriptionRetrotransposon protein
Genome locationchr08:19144524..19145416
RNA-Seq ExpressionMELO3C009040
SyntenyMELO3C009040
Gene Ontology termsGO:0090304 - nucleic acid metabolic process (biological process)
GO:0046872 - metal ion binding (molecular function)
GO:0140640 - catalytic activity, acting on a nucleic acid (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0042491.1 RNA-directed DNA polymerase-like protein [Cucumis melo var. makuwa]2.3e-2666.98Show/hide
Query:  HLACKGLLNKPFPHYDELSYVFEKDRTTGASVEMFTDIGSNVPGESDGVQAEDGLDMEFPTMCSLRMNVSLEDRMGARPSMSTVDRMGSSGSKRKR-RGQ
        H A KGLLNK FPHYDELSYVF K   TGAS E F DI SNVPGES+GV+ EDGL MEF TMCS RMN+SLED M  +P  ST  R+G + SKRKR R  
Subjt:  HLACKGLLNKPFPHYDELSYVFEKDRTTGASVEMFTDIGSNVPGESDGVQAEDGLDMEFPTMCSLRMNVSLEDRMGARPSMSTVDRMGSSGSKRKR-RGQ

Query:  FETVDV
         ETV+V
Subjt:  FETVDV

KAA0048148.1 retrotransposon protein [Cucumis melo var. makuwa]6.1e-2757.38Show/hide
Query:  HLACKGLLNKPFPHYDELSYVFEKDRTTGASVEMFTDIGSNVPGESDGVQAEDGLDMEFPTMCSLRMNVSLEDRMGARPSMSTVDRMGSSGSKRKR-RGQ
        H A K LLNKPF HYD LSYVFEKD+ TGA  E F DI SN+    D V  +DG+DMEFP MCS RMN+S +D MG R   S+  R GSS  KRK    Q
Subjt:  HLACKGLLNKPFPHYDELSYVFEKDRTTGASVEMFTDIGSNVPGESDGVQAEDGLDMEFPTMCSLRMNVSLEDRMGARPSMSTVDRMGSSGSKRKR-RGQ

Query:  FETVDVFRDAMHISNDQLRDIA
        FET D+ R+ M  + DQLR IA
Subjt:  FETVDVFRDAMHISNDQLRDIA

KAA0060069.1 retrotransposon protein [Cucumis melo var. makuwa]3.0e-58100Show/hide
Query:  GLLNKPFPHYDELSYVFEKDRTTGASVEMFTDIGSNVPGESDGVQAEDGLDMEFPTMCSLRMNVSLEDRMGARPSMSTVDRMGSSGSKRKRRGQFETVDV
        GLLNKPFPHYDELSYVFEKDRTTGASVEMFTDIGSNVPGESDGVQAEDGLDMEFPTMCSLRMNVSLEDRMGARPSMSTVDRMGSSGSKRKRRGQFETVDV
Subjt:  GLLNKPFPHYDELSYVFEKDRTTGASVEMFTDIGSNVPGESDGVQAEDGLDMEFPTMCSLRMNVSLEDRMGARPSMSTVDRMGSSGSKRKRRGQFETVDV

Query:  FRDAMHISNDQLRDIA
        FRDAMHISNDQLRDIA
Subjt:  FRDAMHISNDQLRDIA

TYK22883.1 retrotransposon protein [Cucumis melo var. makuwa]2.3e-2666.98Show/hide
Query:  HLACKGLLNKPFPHYDELSYVFEKDRTTGASVEMFTDIGSNVPGESDGVQAEDGLDMEFPTMCSLRMNVSLEDRMGARPSMSTVDRMGSSGSKRKR-RGQ
        H A KGLLNK FPHYDELSYVF K   TGAS E F DI SNVPGES+GV+ EDGL MEF TMCS RMN+SLED M  +P  ST  R+G + SKRKR R  
Subjt:  HLACKGLLNKPFPHYDELSYVFEKDRTTGASVEMFTDIGSNVPGESDGVQAEDGLDMEFPTMCSLRMNVSLEDRMGARPSMSTVDRMGSSGSKRKR-RGQ

Query:  FETVDV
         ETV+V
Subjt:  FETVDV

TYK29878.1 retrotransposon protein [Cucumis melo var. makuwa]2.6e-62100Show/hide
Query:  THLACKGLLNKPFPHYDELSYVFEKDRTTGASVEMFTDIGSNVPGESDGVQAEDGLDMEFPTMCSLRMNVSLEDRMGARPSMSTVDRMGSSGSKRKRRGQ
        THLACKGLLNKPFPHYDELSYVFEKDRTTGASVEMFTDIGSNVPGESDGVQAEDGLDMEFPTMCSLRMNVSLEDRMGARPSMSTVDRMGSSGSKRKRRGQ
Subjt:  THLACKGLLNKPFPHYDELSYVFEKDRTTGASVEMFTDIGSNVPGESDGVQAEDGLDMEFPTMCSLRMNVSLEDRMGARPSMSTVDRMGSSGSKRKRRGQ

Query:  FETVDVFRDAMHISNDQLRDIA
        FETVDVFRDAMHISNDQLRDIA
Subjt:  FETVDVFRDAMHISNDQLRDIA

TrEMBL top hitse value%identityAlignment
A0A5A7TLN6 RNA-directed DNA polymerase-like protein1.1e-2666.98Show/hide
Query:  HLACKGLLNKPFPHYDELSYVFEKDRTTGASVEMFTDIGSNVPGESDGVQAEDGLDMEFPTMCSLRMNVSLEDRMGARPSMSTVDRMGSSGSKRKR-RGQ
        H A KGLLNK FPHYDELSYVF K   TGAS E F DI SNVPGES+GV+ EDGL MEF TMCS RMN+SLED M  +P  ST  R+G + SKRKR R  
Subjt:  HLACKGLLNKPFPHYDELSYVFEKDRTTGASVEMFTDIGSNVPGESDGVQAEDGLDMEFPTMCSLRMNVSLEDRMGARPSMSTVDRMGSSGSKRKR-RGQ

Query:  FETVDV
         ETV+V
Subjt:  FETVDV

A0A5A7TYU4 Retrotransposon protein3.0e-2757.38Show/hide
Query:  HLACKGLLNKPFPHYDELSYVFEKDRTTGASVEMFTDIGSNVPGESDGVQAEDGLDMEFPTMCSLRMNVSLEDRMGARPSMSTVDRMGSSGSKRKR-RGQ
        H A K LLNKPF HYD LSYVFEKD+ TGA  E F DI SN+    D V  +DG+DMEFP MCS RMN+S +D MG R   S+  R GSS  KRK    Q
Subjt:  HLACKGLLNKPFPHYDELSYVFEKDRTTGASVEMFTDIGSNVPGESDGVQAEDGLDMEFPTMCSLRMNVSLEDRMGARPSMSTVDRMGSSGSKRKR-RGQ

Query:  FETVDVFRDAMHISNDQLRDIA
        FET D+ R+ M  + DQLR IA
Subjt:  FETVDVFRDAMHISNDQLRDIA

A0A5A7V2R5 Retrotransposon protein1.5e-58100Show/hide
Query:  GLLNKPFPHYDELSYVFEKDRTTGASVEMFTDIGSNVPGESDGVQAEDGLDMEFPTMCSLRMNVSLEDRMGARPSMSTVDRMGSSGSKRKRRGQFETVDV
        GLLNKPFPHYDELSYVFEKDRTTGASVEMFTDIGSNVPGESDGVQAEDGLDMEFPTMCSLRMNVSLEDRMGARPSMSTVDRMGSSGSKRKRRGQFETVDV
Subjt:  GLLNKPFPHYDELSYVFEKDRTTGASVEMFTDIGSNVPGESDGVQAEDGLDMEFPTMCSLRMNVSLEDRMGARPSMSTVDRMGSSGSKRKRRGQFETVDV

Query:  FRDAMHISNDQLRDIA
        FRDAMHISNDQLRDIA
Subjt:  FRDAMHISNDQLRDIA

A0A5D3DH48 Retrotransposon protein1.1e-2666.98Show/hide
Query:  HLACKGLLNKPFPHYDELSYVFEKDRTTGASVEMFTDIGSNVPGESDGVQAEDGLDMEFPTMCSLRMNVSLEDRMGARPSMSTVDRMGSSGSKRKR-RGQ
        H A KGLLNK FPHYDELSYVF K   TGAS E F DI SNVPGES+GV+ EDGL MEF TMCS RMN+SLED M  +P  ST  R+G + SKRKR R  
Subjt:  HLACKGLLNKPFPHYDELSYVFEKDRTTGASVEMFTDIGSNVPGESDGVQAEDGLDMEFPTMCSLRMNVSLEDRMGARPSMSTVDRMGSSGSKRKR-RGQ

Query:  FETVDV
         ETV+V
Subjt:  FETVDV

A0A5D3E267 Retrotransposon protein1.3e-62100Show/hide
Query:  THLACKGLLNKPFPHYDELSYVFEKDRTTGASVEMFTDIGSNVPGESDGVQAEDGLDMEFPTMCSLRMNVSLEDRMGARPSMSTVDRMGSSGSKRKRRGQ
        THLACKGLLNKPFPHYDELSYVFEKDRTTGASVEMFTDIGSNVPGESDGVQAEDGLDMEFPTMCSLRMNVSLEDRMGARPSMSTVDRMGSSGSKRKRRGQ
Subjt:  THLACKGLLNKPFPHYDELSYVFEKDRTTGASVEMFTDIGSNVPGESDGVQAEDGLDMEFPTMCSLRMNVSLEDRMGARPSMSTVDRMGSSGSKRKRRGQ

Query:  FETVDVFRDAMHISNDQLRDIA
        FETVDVFRDAMHISNDQLRDIA
Subjt:  FETVDVFRDAMHISNDQLRDIA

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGCTTAAGTGCATCATTGCAGCAAAGGACGTCTTCGATAACGCATCTTGCATGCAAAGGCCTGCTTAACAAGCCCTTCCCCCATTACGATGAGTTGTCGTAT
GTCTTTGAGAAAGACCGCACCACGGGGGCCAGTGTAGAGATGTTCACTGATATAGGGTCGAATGTGCCAGGCGAAAGTGATGGAGTTCAAGCAGAAGATGGGTTG
GATATGGAGTTCCCTACTATGTGCAGCCTGAGAATGAATGTGTCACTCGAGGACAGGATGGGTGCACGACCTAGTATGTCCACTGTCGATAGGATGGGTTCGAGT
GGATCAAAGAGGAAGCGCAGAGGGCAGTTTGAGACTGTGGATGTTTTTCGCGATGCCATGCACATTTCCAATGACCAGCTCAGGGACATCGCATAA
mRNA sequenceShow/hide mRNA sequence
ATGAGCTTAAGTGCATCATTGCAGCAAAGGACGTCTTCGATAACGCATCTTGCATGCAAAGGCCTGCTTAACAAGCCCTTCCCCCATTACGATGAGTTGTCGTAT
GTCTTTGAGAAAGACCGCACCACGGGGGCCAGTGTAGAGATGTTCACTGATATAGGGTCGAATGTGCCAGGCGAAAGTGATGGAGTTCAAGCAGAAGATGGGTTG
GATATGGAGTTCCCTACTATGTGCAGCCTGAGAATGAATGTGTCACTCGAGGACAGGATGGGTGCACGACCTAGTATGTCCACTGTCGATAGGATGGGTTCGAGT
GGATCAAAGAGGAAGCGCAGAGGGCAGTTTGAGACTGTGGATGTTTTTCGCGATGCCATGCACATTTCCAATGACCAGCTCAGGGACATCGCATAATGGATGATG
ATAGCTAGAGAGGAGGAAGACTCTGTGCGGCGGGCCATCATTTACACATTTGCAGGTTATCCCTTAACTCAATGTGGAGGACAGTGCACGCTGTATGATGGTCAT
AACTAAGAACTCCCTATCATGAAAGCTAGCCTTCTTGGACCTACCGGATGCGATGAAGCTCGCCTTTGCAACGTCAATTGGCACGATAACTCCTAATTGGTCTAC
CACATCCACCGCATGACCCGTAGTTGTTTTGGCCTTCTGAACACTCTTTACTCTGAATTACTTTTTATGATCGCATTGACTTCACGTTTACCGTTATTTATAAGA
ATGACTTTTATTTTGTAACTCATGTTCTTTCAATGAATTTATGTTTG
Protein sequenceShow/hide protein sequence
MSLSASLQQRTSSITHLACKGLLNKPFPHYDELSYVFEKDRTTGASVEMFTDIGSNVPGESDGVQAEDGLDMEFPTMCSLRMNVSLEDRMGARPSMSTVDRMGSS
GSKRKRRGQFETVDVFRDAMHISNDQLRDIA