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MELO3C009064 (gene) of Melon (DHL92) v4 genome

Gene IDMELO3C009064
OrganismCucumis melo DHL92 (Melon (DHL92) v4)
DescriptionArabinogalactan peptide 23-like
Genome locationchr08:18587085..18587273
RNA-Seq ExpressionMELO3C009064
SyntenyMELO3C009064
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsIPR044702 - Arabinogalactan protein 23/40


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0035760.1 arabinogalactan peptide 23-like [Cucumis melo var. makuwa]6.7e-21100Show/hide
Query:  MEMKNFACAAFIAVVASLSMVLASDEAASPAPGPSSGVSATLPVVGTLLGASAASLIAYCLQ
        MEMKNFACAAFIAVVASLSMVLASDEAASPAPGPSSGVSATLPVVGTLLGASAASLIAYCLQ
Subjt:  MEMKNFACAAFIAVVASLSMVLASDEAASPAPGPSSGVSATLPVVGTLLGASAASLIAYCLQ

KAE8649766.1 hypothetical protein Csa_011936, partial [Cucumis sativus]1.7e-1693.1Show/hide
Query:  NFACAAFIAVVASLSMVLASDEAASPAPGPSSGVSATLPVVGTLLGASAASLIAYCLQ
        NFACAAFI V ASLSMVLASDEAASPAPGPSS  SATLPVVGTLLGASAASLIAYCLQ
Subjt:  NFACAAFIAVVASLSMVLASDEAASPAPGPSSGVSATLPVVGTLLGASAASLIAYCLQ

KAG6603249.1 Fructokinase-like 2, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia]6.5e-0868.85Show/hide
Query:  NFACAAFIAV--VASLSMVLASDEAASPAPGPSS-GVSATLPVVGTLLGASAASLIAYCLQ
        NFA AA +A+   ASL+M LAS E A+PAPGPSS   +AT+PVVGTLLGAS ASLIA+CLQ
Subjt:  NFACAAFIAV--VASLSMVLASDEAASPAPGPSS-GVSATLPVVGTLLGASAASLIAYCLQ

KCW90250.1 hypothetical protein EUGRSUZ_A02403, partial [Eucalyptus grandis]4.2e-0759.68Show/hide
Query:  MEMKNFACAAFIAVVASLSMVLASDEAASPAPGPSSGVSATLPVVGTLLGASAASLIAYCLQ
        M+MK  +CA  +A  AS+S VLASD++ +PAPGPSSG SA LPV G+L+GAS  S  AY LQ
Subjt:  MEMKNFACAAFIAVVASLSMVLASDEAASPAPGPSSGVSATLPVVGTLLGASAASLIAYCLQ

PNT29922.1 hypothetical protein POPTR_006G056200 [Populus trichocarpa]7.2e-0758.06Show/hide
Query:  MEMKNFACAAFIAVVASLSMVLASDEAASPAPGPSSGVSATLPVVGTLLGASAASLIAYCLQ
        ME+K  +CA  + V AS+S  LA+DE ++PAP P+SG SATLPVVG+L+GAS  S  AY LQ
Subjt:  MEMKNFACAAFIAVVASLSMVLASDEAASPAPGPSSGVSATLPVVGTLLGASAASLIAYCLQ

TrEMBL top hitse value%identityAlignment
A0A059DIY4 Uncharacterized protein (Fragment)2.0e-0759.68Show/hide
Query:  MEMKNFACAAFIAVVASLSMVLASDEAASPAPGPSSGVSATLPVVGTLLGASAASLIAYCLQ
        M+MK  +CA  +A  AS+S VLASD++ +PAPGPSSG SA LPV G+L+GAS  S  AY LQ
Subjt:  MEMKNFACAAFIAVVASLSMVLASDEAASPAPGPSSGVSATLPVVGTLLGASAASLIAYCLQ

A0A200QP69 Uncharacterized protein1.0e-0651.61Show/hide
Query:  MEMKNFACAAFIAVVASLSMVLASDEAASPAPGPSSGVSATLPVVGTLLGASAASLIAYCLQ
        M+MK  +CA  IAV AS++  LA+DEA +PAPGP+S    T+PV+G+L+GAS  S  A+ +Q
Subjt:  MEMKNFACAAFIAVVASLSMVLASDEAASPAPGPSSGVSATLPVVGTLLGASAASLIAYCLQ

A0A2K1ZXB0 Uncharacterized protein3.5e-0758.06Show/hide
Query:  MEMKNFACAAFIAVVASLSMVLASDEAASPAPGPSSGVSATLPVVGTLLGASAASLIAYCLQ
        ME+K  +CA  + V AS+S  LA+DE ++PAP P+SG SATLPVVG+L+GAS  S  AY LQ
Subjt:  MEMKNFACAAFIAVVASLSMVLASDEAASPAPGPSSGVSATLPVVGTLLGASAASLIAYCLQ

A0A5D3E271 Arabinogalactan peptide 23-like3.2e-21100Show/hide
Query:  MEMKNFACAAFIAVVASLSMVLASDEAASPAPGPSSGVSATLPVVGTLLGASAASLIAYCLQ
        MEMKNFACAAFIAVVASLSMVLASDEAASPAPGPSSGVSATLPVVGTLLGASAASLIAYCLQ
Subjt:  MEMKNFACAAFIAVVASLSMVLASDEAASPAPGPSSGVSATLPVVGTLLGASAASLIAYCLQ

A0A6V7PL33 Uncharacterized protein1.7e-0657.38Show/hide
Query:  MEMKNFACAAFIAVVASLSMVLASDEAASPAPGPSSGVSATLPVVGTLLGASAASLIAYCL
        MEMK  ACAA +A  AS +  LA+D AA+PAPGP+SG  A  P VGT++GA+  S +AYCL
Subjt:  MEMKNFACAAFIAVVASLSMVLASDEAASPAPGPSSGVSATLPVVGTLLGASAASLIAYCL

SwissProt top hitse value%identityAlignment
Q8S2W4 Arabinogalactan protein 237.4e-0750.82Show/hide
Query:  MEMKNFACAAFIAVVASLSMVLASDEAASPAPGPSSGVSATLPVVGTLLGASAASLIAYCL
        MEMK  AC    A  AS++ V+A++E  +PAPGP+S  SA LP +G+L+GAS  SL +Y L
Subjt:  MEMKNFACAAFIAVVASLSMVLASDEAASPAPGPSSGVSATLPVVGTLLGASAASLIAYCL

Arabidopsis top hitse value%identityAlignment
AT2G41905.1 BEST Arabidopsis thaliana protein match is: arabinogalactan protein 23 (TAIR:AT3G57690.1)4.2e-0550Show/hide
Query:  MEMKNFACAAFIAVVASLSMVLASDEAASPAPGP-SSGVSATLPVVGTLLGASAASLIAYCL
        MEMK  AC    A  AS++ V+A+ E  +PAPGP +SG S  +P +G+L+GAS  SL AY L
Subjt:  MEMKNFACAAFIAVVASLSMVLASDEAASPAPGP-SSGVSATLPVVGTLLGASAASLIAYCL

AT3G20865.1 arabinogalactan protein 402.7e-0441.94Show/hide
Query:  MEMKNFACAAFIAVVASLSMVLASDEAASPAPGPSSGVSATLPVVGTLLGASAASLIAYCLQ
        MEMKN   A FI+ V   S+  A+ E+ +P+PG SS  +   PVVG+++ AS ++ +A  LQ
Subjt:  MEMKNFACAAFIAVVASLSMVLASDEAASPAPGPSSGVSATLPVVGTLLGASAASLIAYCLQ

AT3G57690.1 arabinogalactan protein 235.3e-0850.82Show/hide
Query:  MEMKNFACAAFIAVVASLSMVLASDEAASPAPGPSSGVSATLPVVGTLLGASAASLIAYCL
        MEMK  AC    A  AS++ V+A++E  +PAPGP+S  SA LP +G+L+GAS  SL +Y L
Subjt:  MEMKNFACAAFIAVVASLSMVLASDEAASPAPGPSSGVSATLPVVGTLLGASAASLIAYCL


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAAATGAAGAACTTTGCCTGTGCCGCCTTCATCGCTGTTGTCGCCTCCCTGAGCATGGTTTTGGCCTCTGATGAAGCAGCATCCCCCGCTCCCGGCCCATCCAGCGG
TGTTTCCGCTACTTTGCCCGTCGTCGGGACATTGCTAGGTGCATCTGCTGCCTCTCTCATTGCTTACTGCCTTCAGTAA
mRNA sequenceShow/hide mRNA sequence
ATGGAAATGAAGAACTTTGCCTGTGCCGCCTTCATCGCTGTTGTCGCCTCCCTGAGCATGGTTTTGGCCTCTGATGAAGCAGCATCCCCCGCTCCCGGCCCATCCAGCGG
TGTTTCCGCTACTTTGCCCGTCGTCGGGACATTGCTAGGTGCATCTGCTGCCTCTCTCATTGCTTACTGCCTTCAGTAA
Protein sequenceShow/hide protein sequence
MEMKNFACAAFIAVVASLSMVLASDEAASPAPGPSSGVSATLPVVGTLLGASAASLIAYCLQ