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MELO3C009298 (gene) of Melon (DHL92) v4 genome

Gene IDMELO3C009298
OrganismCucumis melo DHL92 (Melon (DHL92) v4)
Descriptionprotein MODIFIER OF SNC1 11-like
Genome locationchr04:31837742..31839198
RNA-Seq ExpressionMELO3C009298
SyntenyMELO3C009298
Gene Ontology termsGO:0016973 - poly(A)+ mRNA export from nucleus (biological process)
GO:0005634 - nucleus (cellular component)
InterPro domainsIPR040746 - THO1_MOS11, C-terminal domain
IPR044209 - Protein MODIFIER OF SNC1 11


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004137795.1 protein MODIFIER OF SNC1 11 isoform X2 [Cucumis sativus]3.0e-5493.33Show/hide
Query:  MATDFKEELSENTLPGPKQTLPLDFGITAAGNGHVDQHQNRHSSATKEGIESQSSAVGRIPESHASVFDIFKKIRRAERFGIPVRLSEAEKRFSRAERFG
        MATDF +ELS+NTLPGPKQTLPL FGI AAGNGHVDQHQNR S  TKEGIESQSSAVGRIPESHASVFDIFKKIRRAERFGIPVRLSEAEKRFSRAERFG
Subjt:  MATDFKEELSENTLPGPKQTLPLDFGITAAGNGHVDQHQNRHSSATKEGIESQSSAVGRIPESHASVFDIFKKIRRAERFGIPVRLSEAEKRFSRAERFG

Query:  IDSVCGPDEMAKAEELKRKI
        IDSVCGPDEMAKAEELKRKI
Subjt:  IDSVCGPDEMAKAEELKRKI

XP_008442609.1 PREDICTED: protein MODIFIER OF SNC1 11-like isoform X1 [Cucumis melo]7.0e-59100Show/hide
Query:  MATDFKEELSENTLPGPKQTLPLDFGITAAGNGHVDQHQNRHSSATKEGIESQSSAVGRIPESHASVFDIFKKIRRAERFGIPVRLSEAEKRFSRAERFG
        MATDFKEELSENTLPGPKQTLPLDFGITAAGNGHVDQHQNRHSSATKEGIESQSSAVGRIPESHASVFDIFKKIRRAERFGIPVRLSEAEKRFSRAERFG
Subjt:  MATDFKEELSENTLPGPKQTLPLDFGITAAGNGHVDQHQNRHSSATKEGIESQSSAVGRIPESHASVFDIFKKIRRAERFGIPVRLSEAEKRFSRAERFG

Query:  IDSVCGPDEMAKAEELKRK
        IDSVCGPDEMAKAEELKRK
Subjt:  IDSVCGPDEMAKAEELKRK

XP_008442610.1 PREDICTED: uncharacterized protein LOC103486433 isoform X2 [Cucumis melo]2.4e-59100Show/hide
Query:  MATDFKEELSENTLPGPKQTLPLDFGITAAGNGHVDQHQNRHSSATKEGIESQSSAVGRIPESHASVFDIFKKIRRAERFGIPVRLSEAEKRFSRAERFG
        MATDFKEELSENTLPGPKQTLPLDFGITAAGNGHVDQHQNRHSSATKEGIESQSSAVGRIPESHASVFDIFKKIRRAERFGIPVRLSEAEKRFSRAERFG
Subjt:  MATDFKEELSENTLPGPKQTLPLDFGITAAGNGHVDQHQNRHSSATKEGIESQSSAVGRIPESHASVFDIFKKIRRAERFGIPVRLSEAEKRFSRAERFG

Query:  IDSVCGPDEMAKAEELKRKI
        IDSVCGPDEMAKAEELKRKI
Subjt:  IDSVCGPDEMAKAEELKRKI

XP_011651924.1 protein MODIFIER OF SNC1 11 isoform X1 [Cucumis sativus]8.9e-5493.28Show/hide
Query:  MATDFKEELSENTLPGPKQTLPLDFGITAAGNGHVDQHQNRHSSATKEGIESQSSAVGRIPESHASVFDIFKKIRRAERFGIPVRLSEAEKRFSRAERFG
        MATDF +ELS+NTLPGPKQTLPL FGI AAGNGHVDQHQNR S  TKEGIESQSSAVGRIPESHASVFDIFKKIRRAERFGIPVRLSEAEKRFSRAERFG
Subjt:  MATDFKEELSENTLPGPKQTLPLDFGITAAGNGHVDQHQNRHSSATKEGIESQSSAVGRIPESHASVFDIFKKIRRAERFGIPVRLSEAEKRFSRAERFG

Query:  IDSVCGPDEMAKAEELKRK
        IDSVCGPDEMAKAEELKRK
Subjt:  IDSVCGPDEMAKAEELKRK

XP_038904188.1 protein MODIFIER OF SNC1 11-like [Benincasa hispida]2.5e-4886.78Show/hide
Query:  MATDFKEELSENTLPGPKQTLPLDFGITAAGNGHVDQHQNRHSSA--TKEGIESQSSAVGRIPESHASVFDIFKKIRRAERFGIPVRLSEAEKRFSRAER
        MAT+F EELSENTLPGPKQTLPL+ G  AAGNG VDQHQNR SSA  TKE IESQ +AVGRIPE H SVFDIFKKIRRAERFGIPVRLSEAEKRFSRAER
Subjt:  MATDFKEELSENTLPGPKQTLPLDFGITAAGNGHVDQHQNRHSSA--TKEGIESQSSAVGRIPESHASVFDIFKKIRRAERFGIPVRLSEAEKRFSRAER

Query:  FGIDSVCGPDEMAKAEELKRK
        FGIDSVCGPDEM KAEELKRK
Subjt:  FGIDSVCGPDEMAKAEELKRK

TrEMBL top hitse value%identityAlignment
A0A0A0LDV0 Tho1_MOS11_C domain-containing protein4.3e-5493.28Show/hide
Query:  MATDFKEELSENTLPGPKQTLPLDFGITAAGNGHVDQHQNRHSSATKEGIESQSSAVGRIPESHASVFDIFKKIRRAERFGIPVRLSEAEKRFSRAERFG
        MATDF +ELS+NTLPGPKQTLPL FGI AAGNGHVDQHQNR S  TKEGIESQSSAVGRIPESHASVFDIFKKIRRAERFGIPVRLSEAEKRFSRAERFG
Subjt:  MATDFKEELSENTLPGPKQTLPLDFGITAAGNGHVDQHQNRHSSATKEGIESQSSAVGRIPESHASVFDIFKKIRRAERFGIPVRLSEAEKRFSRAERFG

Query:  IDSVCGPDEMAKAEELKRK
        IDSVCGPDEMAKAEELKRK
Subjt:  IDSVCGPDEMAKAEELKRK

A0A1S3B640 protein MODIFIER OF SNC1 11-like isoform X13.4e-59100Show/hide
Query:  MATDFKEELSENTLPGPKQTLPLDFGITAAGNGHVDQHQNRHSSATKEGIESQSSAVGRIPESHASVFDIFKKIRRAERFGIPVRLSEAEKRFSRAERFG
        MATDFKEELSENTLPGPKQTLPLDFGITAAGNGHVDQHQNRHSSATKEGIESQSSAVGRIPESHASVFDIFKKIRRAERFGIPVRLSEAEKRFSRAERFG
Subjt:  MATDFKEELSENTLPGPKQTLPLDFGITAAGNGHVDQHQNRHSSATKEGIESQSSAVGRIPESHASVFDIFKKIRRAERFGIPVRLSEAEKRFSRAERFG

Query:  IDSVCGPDEMAKAEELKRK
        IDSVCGPDEMAKAEELKRK
Subjt:  IDSVCGPDEMAKAEELKRK

A0A1S3B6R5 uncharacterized protein LOC103486433 isoform X21.2e-59100Show/hide
Query:  MATDFKEELSENTLPGPKQTLPLDFGITAAGNGHVDQHQNRHSSATKEGIESQSSAVGRIPESHASVFDIFKKIRRAERFGIPVRLSEAEKRFSRAERFG
        MATDFKEELSENTLPGPKQTLPLDFGITAAGNGHVDQHQNRHSSATKEGIESQSSAVGRIPESHASVFDIFKKIRRAERFGIPVRLSEAEKRFSRAERFG
Subjt:  MATDFKEELSENTLPGPKQTLPLDFGITAAGNGHVDQHQNRHSSATKEGIESQSSAVGRIPESHASVFDIFKKIRRAERFGIPVRLSEAEKRFSRAERFG

Query:  IDSVCGPDEMAKAEELKRKI
        IDSVCGPDEMAKAEELKRKI
Subjt:  IDSVCGPDEMAKAEELKRKI

A0A5D3DNB7 Protein MODIFIER OF SNC1 11-like isoform X13.4e-59100Show/hide
Query:  MATDFKEELSENTLPGPKQTLPLDFGITAAGNGHVDQHQNRHSSATKEGIESQSSAVGRIPESHASVFDIFKKIRRAERFGIPVRLSEAEKRFSRAERFG
        MATDFKEELSENTLPGPKQTLPLDFGITAAGNGHVDQHQNRHSSATKEGIESQSSAVGRIPESHASVFDIFKKIRRAERFGIPVRLSEAEKRFSRAERFG
Subjt:  MATDFKEELSENTLPGPKQTLPLDFGITAAGNGHVDQHQNRHSSATKEGIESQSSAVGRIPESHASVFDIFKKIRRAERFGIPVRLSEAEKRFSRAERFG

Query:  IDSVCGPDEMAKAEELKRK
        IDSVCGPDEMAKAEELKRK
Subjt:  IDSVCGPDEMAKAEELKRK

A0A6J1F8Q7 protein MODIFIER OF SNC1 11-like2.4e-4476.15Show/hide
Query:  MATDFKEELSENTLPGPKQTLPLDFGITAAGNGHVDQHQNRHS-----------SATKEGIESQSSAVGRIPESHASVFDIFKKIRRAERFGIPVRLSEA
        MATDF EELSEN LPGPK  LPL+ G  AAGNG VDQHQNR S           +ATKEG ESQ + +GR  E HASVFDIFKKIRRAERFGIPVRLSEA
Subjt:  MATDFKEELSENTLPGPKQTLPLDFGITAAGNGHVDQHQNRHS-----------SATKEGIESQSSAVGRIPESHASVFDIFKKIRRAERFGIPVRLSEA

Query:  EKRFSRAERFGIDSVCGPDEMAKAEELKRK
        EKRFSRAERFGIDSVCGPDEM KAEELKRK
Subjt:  EKRFSRAERFGIDSVCGPDEMAKAEELKRK

SwissProt top hitse value%identityAlignment
Q9LZ08 Protein MODIFIER OF SNC1 111.2e-0864.29Show/hide
Query:  VFDIFKKIRRAERFGIPVRLSEAEKRFSRAERFGIDS---VCGPDEMAKAEELKRK
        V DI KKIRRAERFG+ V+L+E EKR SRAERFG  +   V G +   KAEELKRK
Subjt:  VFDIFKKIRRAERFGIPVRLSEAEKRFSRAERFGIDS---VCGPDEMAKAEELKRK

Arabidopsis top hitse value%identityAlignment
AT5G02770.1 unknown protein8.4e-1064.29Show/hide
Query:  VFDIFKKIRRAERFGIPVRLSEAEKRFSRAERFGIDS---VCGPDEMAKAEELKRK
        V DI KKIRRAERFG+ V+L+E EKR SRAERFG  +   V G +   KAEELKRK
Subjt:  VFDIFKKIRRAERFGIPVRLSEAEKRFSRAERFGIDS---VCGPDEMAKAEELKRK


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGACCGATTTCAAAGAAGAACTGAGCGAAAACACTCTTCCAGGACCGAAGCAAACCCTACCGCTAGATTTTGGAATCACAGCCGCTGGTAATGGCCATGTAGATCA
ACACCAAAATCGCCATTCTTCCGCTACAAAGGAAGGTATTGAATCTCAAAGTTCCGCCGTGGGGAGAATACCGGAGTCTCATGCTTCTGTTTTTGATATCTTTAAGAAGA
TCCGTCGGGCGGAGCGATTTGGGATCCCCGTACGTTTATCAGAGGCAGAAAAGCGATTTTCTCGAGCTGAGAGGTTCGGGATTGATTCAGTGTGTGGACCGGATGAAATG
GCCAAAGCAGAGGAGCTGAAGAGAAAGATTTGA
mRNA sequenceShow/hide mRNA sequence
GCTACTGCATCGAAAAGCTCACCCTCTTTATATCATCGATTCTAAATTTCGCGCAGGTCTCGATCTTCCTTCTCCAATGGCGACCGATTTCAAAGAAGAACTGAGCGAAA
ACACTCTTCCAGGACCGAAGCAAACCCTACCGCTAGATTTTGGAATCACAGCCGCTGGTAATGGCCATGTAGATCAACACCAAAATCGCCATTCTTCCGCTACAAAGGAA
GGTATTGAATCTCAAAGTTCCGCCGTGGGGAGAATACCGGAGTCTCATGCTTCTGTTTTTGATATCTTTAAGAAGATCCGTCGGGCGGAGCGATTTGGGATCCCCGTACG
TTTATCAGAGGCAGAAAAGCGATTTTCTCGAGCTGAGAGGTTCGGGATTGATTCAGTGTGTGGACCGGATGAAATGGCCAAAGCAGAGGAGCTGAAGAGAAAGATTTGAG
CTCTTAACTCTGTCTATGGCTACTGATGAAGAAGCAAAGAAGAAAGCTCGGCTTGCCAGATTTGCCCCGTATTTATAGAATTCCCCTTTGGTTAAACAACAACGCAAAAT
CATCAATTCTTATGCACAGCCAAACTATTATTCATTTGATTGACCAATTGAACGAGCCGACCTTGTCTCAGATACCCCCTTAGTTATTCGTATCCTGGTCAGTTTAAGGA
TGCGGAAATTATTTGTATGAACTCTATAGAATTGAACTCCATTAGCCGGAGGTGAAGTTTTAATTTCTAGAACTGCACCCTCTTATGGGTACTTTCATTCAATTTTCTAC
ATGCCCATTTTTGTTTCAAAATAAAATTATCTATACTACTATAATCATCGTTCTTTTAGTGCTCAAGAAGGTCCTTCGAGTTTGATCCAAGTAAATGGCAAGGGAGATGT
TCTTGTTGGTTCCTTTTTAGTAGGTTTAGCGACTTGTTTGGTGAGGACTCTCAATGCTCAATCGTTATGCAGTCTATAGCTTACAGTTTCACATTCTGTTTTCTGAAAGT
ACCACGGTTTTATGGAAGGCAGAACAATGGCCTAAAAGAAGTTTTTCCATCTGTT
Protein sequenceShow/hide protein sequence
MATDFKEELSENTLPGPKQTLPLDFGITAAGNGHVDQHQNRHSSATKEGIESQSSAVGRIPESHASVFDIFKKIRRAERFGIPVRLSEAEKRFSRAERFGIDSVCGPDEM
AKAEELKRKI