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MELO3C009309 (gene) of Melon (DHL92) v4 genome

Gene IDMELO3C009309
OrganismCucumis melo DHL92 (Melon (DHL92) v4)
DescriptionNuclear transcription factor Y subunit B
Genome locationchr04:31731751..31735455
RNA-Seq ExpressionMELO3C009309
SyntenyMELO3C009309
Gene Ontology termsGO:0045944 - positive regulation of transcription by RNA polymerase II (biological process)
GO:0016602 - CCAAT-binding factor complex (cellular component)
GO:0000978 - RNA polymerase II proximal promoter sequence-specific DNA binding (molecular function)
GO:0001228 - DNA-binding transcription activator activity, RNA polymerase II-specific (molecular function)
GO:0046982 - protein heterodimerization activity (molecular function)
InterPro domainsIPR003956 - Transcription factor, NFYB/HAP3, conserved site
IPR003958 - Transcription factor CBF/NF-Y/archaeal histone domain
IPR009072 - Histone-fold
IPR027113 - Transcription factor NFYB/HAP3


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7027991.1 Nuclear transcription factor Y subunit B-8 [Cucurbita argyrosperma subsp. argyrosperma]7.6e-5899.15Show/hide
Query:  MADAPASPGGGSHESGEQSPRSNVREQDRFLPIANISRIMKKALPANGKIAKDAKETVQECVSEFISFITSEASDKCQREKRKTINGDDLLWAMATLGFE
        MADAPASPGGGSHESGE SPRSNVREQDRFLPIANISRIMKKALPANGKIAKDAKETVQECVSEFISFITSEASDKCQREKRKTINGDDLLWAMATLGFE
Subjt:  MADAPASPGGGSHESGEQSPRSNVREQDRFLPIANISRIMKKALPANGKIAKDAKETVQECVSEFISFITSEASDKCQREKRKTINGDDLLWAMATLGFE

Query:  DYIDPLKTYLTKYRETG
        DYIDPLKTYLTKYRETG
Subjt:  DYIDPLKTYLTKYRETG

XP_004137802.1 nuclear transcription factor Y subunit B-1 isoform X1 [Cucumis sativus]1.3e-57100Show/hide
Query:  MADAPASPGGGSHESGEQSPRSNVREQDRFLPIANISRIMKKALPANGKIAKDAKETVQECVSEFISFITSEASDKCQREKRKTINGDDLLWAMATLGFE
        MADAPASPGGGSHESGEQSPRSNVREQDRFLPIANISRIMKKALPANGKIAKDAKETVQECVSEFISFITSEASDKCQREKRKTINGDDLLWAMATLGFE
Subjt:  MADAPASPGGGSHESGEQSPRSNVREQDRFLPIANISRIMKKALPANGKIAKDAKETVQECVSEFISFITSEASDKCQREKRKTINGDDLLWAMATLGFE

Query:  DYIDPLKTYLTKYRET
        DYIDPLKTYLTKYRET
Subjt:  DYIDPLKTYLTKYRET

XP_022935570.1 nuclear transcription factor Y subunit B-1-like isoform X1 [Cucurbita moschata]1.3e-57100Show/hide
Query:  MADAPASPGGGSHESGEQSPRSNVREQDRFLPIANISRIMKKALPANGKIAKDAKETVQECVSEFISFITSEASDKCQREKRKTINGDDLLWAMATLGFE
        MADAPASPGGGSHESGEQSPRSNVREQDRFLPIANISRIMKKALPANGKIAKDAKETVQECVSEFISFITSEASDKCQREKRKTINGDDLLWAMATLGFE
Subjt:  MADAPASPGGGSHESGEQSPRSNVREQDRFLPIANISRIMKKALPANGKIAKDAKETVQECVSEFISFITSEASDKCQREKRKTINGDDLLWAMATLGFE

Query:  DYIDPLKTYLTKYRET
        DYIDPLKTYLTKYRET
Subjt:  DYIDPLKTYLTKYRET

XP_022983506.1 nuclear transcription factor Y subunit B-1-like isoform X1 [Cucurbita maxima]1.3e-57100Show/hide
Query:  MADAPASPGGGSHESGEQSPRSNVREQDRFLPIANISRIMKKALPANGKIAKDAKETVQECVSEFISFITSEASDKCQREKRKTINGDDLLWAMATLGFE
        MADAPASPGGGSHESGEQSPRSNVREQDRFLPIANISRIMKKALPANGKIAKDAKETVQECVSEFISFITSEASDKCQREKRKTINGDDLLWAMATLGFE
Subjt:  MADAPASPGGGSHESGEQSPRSNVREQDRFLPIANISRIMKKALPANGKIAKDAKETVQECVSEFISFITSEASDKCQREKRKTINGDDLLWAMATLGFE

Query:  DYIDPLKTYLTKYRET
        DYIDPLKTYLTKYRET
Subjt:  DYIDPLKTYLTKYRET

XP_023529112.1 nuclear transcription factor Y subunit B-1-like isoform X1 [Cucurbita pepo subsp. pepo]1.3e-57100Show/hide
Query:  MADAPASPGGGSHESGEQSPRSNVREQDRFLPIANISRIMKKALPANGKIAKDAKETVQECVSEFISFITSEASDKCQREKRKTINGDDLLWAMATLGFE
        MADAPASPGGGSHESGEQSPRSNVREQDRFLPIANISRIMKKALPANGKIAKDAKETVQECVSEFISFITSEASDKCQREKRKTINGDDLLWAMATLGFE
Subjt:  MADAPASPGGGSHESGEQSPRSNVREQDRFLPIANISRIMKKALPANGKIAKDAKETVQECVSEFISFITSEASDKCQREKRKTINGDDLLWAMATLGFE

Query:  DYIDPLKTYLTKYRET
        DYIDPLKTYLTKYRET
Subjt:  DYIDPLKTYLTKYRET

TrEMBL top hitse value%identityAlignment
A0A0A0LAB9 CBFD_NFYB_HMF domain-containing protein6.2e-58100Show/hide
Query:  MADAPASPGGGSHESGEQSPRSNVREQDRFLPIANISRIMKKALPANGKIAKDAKETVQECVSEFISFITSEASDKCQREKRKTINGDDLLWAMATLGFE
        MADAPASPGGGSHESGEQSPRSNVREQDRFLPIANISRIMKKALPANGKIAKDAKETVQECVSEFISFITSEASDKCQREKRKTINGDDLLWAMATLGFE
Subjt:  MADAPASPGGGSHESGEQSPRSNVREQDRFLPIANISRIMKKALPANGKIAKDAKETVQECVSEFISFITSEASDKCQREKRKTINGDDLLWAMATLGFE

Query:  DYIDPLKTYLTKYRET
        DYIDPLKTYLTKYRET
Subjt:  DYIDPLKTYLTKYRET

A0A1S3B5N5 nuclear transcription factor Y subunit B-1 isoform X16.2e-58100Show/hide
Query:  MADAPASPGGGSHESGEQSPRSNVREQDRFLPIANISRIMKKALPANGKIAKDAKETVQECVSEFISFITSEASDKCQREKRKTINGDDLLWAMATLGFE
        MADAPASPGGGSHESGEQSPRSNVREQDRFLPIANISRIMKKALPANGKIAKDAKETVQECVSEFISFITSEASDKCQREKRKTINGDDLLWAMATLGFE
Subjt:  MADAPASPGGGSHESGEQSPRSNVREQDRFLPIANISRIMKKALPANGKIAKDAKETVQECVSEFISFITSEASDKCQREKRKTINGDDLLWAMATLGFE

Query:  DYIDPLKTYLTKYRET
        DYIDPLKTYLTKYRET
Subjt:  DYIDPLKTYLTKYRET

A0A5D3DNK1 Nuclear transcription factor Y subunit B-16.2e-58100Show/hide
Query:  MADAPASPGGGSHESGEQSPRSNVREQDRFLPIANISRIMKKALPANGKIAKDAKETVQECVSEFISFITSEASDKCQREKRKTINGDDLLWAMATLGFE
        MADAPASPGGGSHESGEQSPRSNVREQDRFLPIANISRIMKKALPANGKIAKDAKETVQECVSEFISFITSEASDKCQREKRKTINGDDLLWAMATLGFE
Subjt:  MADAPASPGGGSHESGEQSPRSNVREQDRFLPIANISRIMKKALPANGKIAKDAKETVQECVSEFISFITSEASDKCQREKRKTINGDDLLWAMATLGFE

Query:  DYIDPLKTYLTKYRET
        DYIDPLKTYLTKYRET
Subjt:  DYIDPLKTYLTKYRET

A0A6J1FB03 nuclear transcription factor Y subunit B-1-like isoform X16.2e-58100Show/hide
Query:  MADAPASPGGGSHESGEQSPRSNVREQDRFLPIANISRIMKKALPANGKIAKDAKETVQECVSEFISFITSEASDKCQREKRKTINGDDLLWAMATLGFE
        MADAPASPGGGSHESGEQSPRSNVREQDRFLPIANISRIMKKALPANGKIAKDAKETVQECVSEFISFITSEASDKCQREKRKTINGDDLLWAMATLGFE
Subjt:  MADAPASPGGGSHESGEQSPRSNVREQDRFLPIANISRIMKKALPANGKIAKDAKETVQECVSEFISFITSEASDKCQREKRKTINGDDLLWAMATLGFE

Query:  DYIDPLKTYLTKYRET
        DYIDPLKTYLTKYRET
Subjt:  DYIDPLKTYLTKYRET

A0A6J1J2H6 nuclear transcription factor Y subunit B-1-like isoform X16.2e-58100Show/hide
Query:  MADAPASPGGGSHESGEQSPRSNVREQDRFLPIANISRIMKKALPANGKIAKDAKETVQECVSEFISFITSEASDKCQREKRKTINGDDLLWAMATLGFE
        MADAPASPGGGSHESGEQSPRSNVREQDRFLPIANISRIMKKALPANGKIAKDAKETVQECVSEFISFITSEASDKCQREKRKTINGDDLLWAMATLGFE
Subjt:  MADAPASPGGGSHESGEQSPRSNVREQDRFLPIANISRIMKKALPANGKIAKDAKETVQECVSEFISFITSEASDKCQREKRKTINGDDLLWAMATLGFE

Query:  DYIDPLKTYLTKYRET
        DYIDPLKTYLTKYRET
Subjt:  DYIDPLKTYLTKYRET

SwissProt top hitse value%identityAlignment
P25209 Nuclear transcription factor Y subunit B1.6e-5086.89Show/hide
Query:  MADAPASP--GGGSHESGEQSPR-----SNVREQDRFLPIANISRIMKKALPANGKIAKDAKETVQECVSEFISFITSEASDKCQREKRKTINGDDLLWA
        MA+APASP  GGGSHESG  SPR      +VREQDRFLPIANISRIMKKA+PANGKIAKDAKETVQECVSEFISFITSEASDKCQREKRKTINGDDLLWA
Subjt:  MADAPASP--GGGSHESGEQSPR-----SNVREQDRFLPIANISRIMKKALPANGKIAKDAKETVQECVSEFISFITSEASDKCQREKRKTINGDDLLWA

Query:  MATLGFEDYIDPLKTYLTKYRE
        MATLGFEDYI+PLK YL KYRE
Subjt:  MATLGFEDYIDPLKTYLTKYRE

Q60EQ4 Nuclear transcription factor Y subunit B-33.9e-4981.4Show/hide
Query:  MADAPASP--GGGSHESGEQSPR------------SNVREQDRFLPIANISRIMKKALPANGKIAKDAKETVQECVSEFISFITSEASDKCQREKRKTIN
        MAD P SP  GGGSHESG  SPR              VREQDRFLPIANISRIMKKA+PANGKIAKDAKETVQECVSEFISFITSEASDKCQREKRKTIN
Subjt:  MADAPASP--GGGSHESGEQSPR------------SNVREQDRFLPIANISRIMKKALPANGKIAKDAKETVQECVSEFISFITSEASDKCQREKRKTIN

Query:  GDDLLWAMATLGFEDYIDPLKTYLTKYRE
        GDDLLWAMATLGFEDYI+PLK YL KYRE
Subjt:  GDDLLWAMATLGFEDYIDPLKTYLTKYRE

Q67XJ2 Nuclear transcription factor Y subunit B-106.7e-4989.91Show/hide
Query:  GGGSHES-GEQSPRS-NVREQDRFLPIANISRIMKKALPANGKIAKDAKETVQECVSEFISFITSEASDKCQREKRKTINGDDLLWAMATLGFEDYIDPL
        GGGSHES G+QSPRS NVREQDRFLPIANISRIMK+ LP NGKIAKDAKET+QECVSEFISF+TSEASDKCQREKRKTINGDDLLWAMATLGFEDYIDPL
Subjt:  GGGSHES-GEQSPRS-NVREQDRFLPIANISRIMKKALPANGKIAKDAKETVQECVSEFISFITSEASDKCQREKRKTINGDDLLWAMATLGFEDYIDPL

Query:  KTYLTKYRE
        K YL +YRE
Subjt:  KTYLTKYRE

Q8VYK4 Nuclear transcription factor Y subunit B-81.3e-4784.87Show/hide
Query:  MADAPA-SPGG-GSHES-GEQSPRS-NVREQDRFLPIANISRIMKKALPANGKIAKDAKETVQECVSEFISFITSEASDKCQREKRKTINGDDLLWAMAT
        MA++ A SPGG GSHES G+QSPRS +VREQDRFLPIANISRIMK+ LPANGKIAKDAKE VQECVSEFISF+TSEASDKCQREKRKTINGDDLLWAMAT
Subjt:  MADAPA-SPGG-GSHES-GEQSPRS-NVREQDRFLPIANISRIMKKALPANGKIAKDAKETVQECVSEFISFITSEASDKCQREKRKTINGDDLLWAMAT

Query:  LGFEDYIDPLKTYLTKYRE
        LGFEDY++PLK YL +YRE
Subjt:  LGFEDYIDPLKTYLTKYRE

Q9SLG0 Nuclear transcription factor Y subunit B-19.0e-4679.13Show/hide
Query:  MADAPASPGGGSHESGEQSPRSNVREQDRFLPIANISRIMKKALPANGKIAKDAKETVQECVSEFISFITSEASDKCQREKRKTINGDDLLWAMATLGFE
        MAD P+SP G   ESG      +VREQDR+LPIANISRIMKKALP NGKI KDAK+TVQECVSEFISFITSEASDKCQ+EKRKT+NGDDLLWAMATLGFE
Subjt:  MADAPASPGGGSHESGEQSPRSNVREQDRFLPIANISRIMKKALPANGKIAKDAKETVQECVSEFISFITSEASDKCQREKRKTINGDDLLWAMATLGFE

Query:  DYIDPLKTYLTKYRE
        DY++PLK YL +YRE
Subjt:  DYIDPLKTYLTKYRE

Arabidopsis top hitse value%identityAlignment
AT2G37060.1 nuclear factor Y, subunit B88.9e-4984.87Show/hide
Query:  MADAPA-SPGG-GSHES-GEQSPRS-NVREQDRFLPIANISRIMKKALPANGKIAKDAKETVQECVSEFISFITSEASDKCQREKRKTINGDDLLWAMAT
        MA++ A SPGG GSHES G+QSPRS +VREQDRFLPIANISRIMK+ LPANGKIAKDAKE VQECVSEFISF+TSEASDKCQREKRKTINGDDLLWAMAT
Subjt:  MADAPA-SPGG-GSHES-GEQSPRS-NVREQDRFLPIANISRIMKKALPANGKIAKDAKETVQECVSEFISFITSEASDKCQREKRKTINGDDLLWAMAT

Query:  LGFEDYIDPLKTYLTKYRE
        LGFEDY++PLK YL +YRE
Subjt:  LGFEDYIDPLKTYLTKYRE

AT2G37060.2 nuclear factor Y, subunit B88.9e-4984.87Show/hide
Query:  MADAPA-SPGG-GSHES-GEQSPRS-NVREQDRFLPIANISRIMKKALPANGKIAKDAKETVQECVSEFISFITSEASDKCQREKRKTINGDDLLWAMAT
        MA++ A SPGG GSHES G+QSPRS +VREQDRFLPIANISRIMK+ LPANGKIAKDAKE VQECVSEFISF+TSEASDKCQREKRKTINGDDLLWAMAT
Subjt:  MADAPA-SPGG-GSHES-GEQSPRS-NVREQDRFLPIANISRIMKKALPANGKIAKDAKETVQECVSEFISFITSEASDKCQREKRKTINGDDLLWAMAT

Query:  LGFEDYIDPLKTYLTKYRE
        LGFEDY++PLK YL +YRE
Subjt:  LGFEDYIDPLKTYLTKYRE

AT2G37060.3 nuclear factor Y, subunit B88.9e-4984.87Show/hide
Query:  MADAPA-SPGG-GSHES-GEQSPRS-NVREQDRFLPIANISRIMKKALPANGKIAKDAKETVQECVSEFISFITSEASDKCQREKRKTINGDDLLWAMAT
        MA++ A SPGG GSHES G+QSPRS +VREQDRFLPIANISRIMK+ LPANGKIAKDAKE VQECVSEFISF+TSEASDKCQREKRKTINGDDLLWAMAT
Subjt:  MADAPA-SPGG-GSHES-GEQSPRS-NVREQDRFLPIANISRIMKKALPANGKIAKDAKETVQECVSEFISFITSEASDKCQREKRKTINGDDLLWAMAT

Query:  LGFEDYIDPLKTYLTKYRE
        LGFEDY++PLK YL +YRE
Subjt:  LGFEDYIDPLKTYLTKYRE

AT2G38880.2 nuclear factor Y, subunit B16.4e-4779.13Show/hide
Query:  MADAPASPGGGSHESGEQSPRSNVREQDRFLPIANISRIMKKALPANGKIAKDAKETVQECVSEFISFITSEASDKCQREKRKTINGDDLLWAMATLGFE
        MAD P+SP G   ESG      +VREQDR+LPIANISRIMKKALP NGKI KDAK+TVQECVSEFISFITSEASDKCQ+EKRKT+NGDDLLWAMATLGFE
Subjt:  MADAPASPGGGSHESGEQSPRSNVREQDRFLPIANISRIMKKALPANGKIAKDAKETVQECVSEFISFITSEASDKCQREKRKTINGDDLLWAMATLGFE

Query:  DYIDPLKTYLTKYRE
        DY++PLK YL +YRE
Subjt:  DYIDPLKTYLTKYRE

AT3G53340.1 nuclear factor Y, subunit B104.7e-5089.91Show/hide
Query:  GGGSHES-GEQSPRS-NVREQDRFLPIANISRIMKKALPANGKIAKDAKETVQECVSEFISFITSEASDKCQREKRKTINGDDLLWAMATLGFEDYIDPL
        GGGSHES G+QSPRS NVREQDRFLPIANISRIMK+ LP NGKIAKDAKET+QECVSEFISF+TSEASDKCQREKRKTINGDDLLWAMATLGFEDYIDPL
Subjt:  GGGSHES-GEQSPRS-NVREQDRFLPIANISRIMKKALPANGKIAKDAKETVQECVSEFISFITSEASDKCQREKRKTINGDDLLWAMATLGFEDYIDPL

Query:  KTYLTKYRE
        K YL +YRE
Subjt:  KTYLTKYRE


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTGATGCTCCGGCGAGTCCCGGCGGAGGAAGCCATGAGAGCGGTGAGCAGAGTCCGAGGTCTAATGTTCGCGAACAGGATAGGTTTCTTCCTATTGCGAATATTAG
TAGGATCATGAAGAAGGCTCTTCCTGCTAATGGGAAGATTGCTAAGGATGCTAAAGAAACCGTACAAGAATGTGTATCGGAGTTTATCAGTTTTATTACTAGCGAGGCAA
GTGATAAATGTCAAAGAGAGAAACGGAAGACGATTAATGGTGATGATTTACTTTGGGCCATGGCCACTCTTGGATTTGAGGATTATATCGATCCACTTAAAACCTACTTG
ACGAAATACAGAGAGACAGGGTGA
mRNA sequenceShow/hide mRNA sequence
GGTTTTGCCCTTTTCCTCTCCTGAATTTGCCCTGAAAAAGGGAAAAACAAAAAACGAACGGTGCTGATAAACTTGATTCTCTCATCTCAGTCGTCTCCTTTCTCCTATCT
TCACCATCGTCCGATTCCATTCCACCACTCCATTTCCACCCGATCTAAATCCTTCTCTCTCGCGCCCAAATTACAAATCTTCCGTTTTCTCCCACCAGGGTTTTGGTGAA
GATGGCTGATGCTCCGGCGAGTCCCGGCGGAGGAAGCCATGAGAGCGGTGAGCAGAGTCCGAGGTCTAATGTTCGCGAACAGGATAGGTTTCTTCCTATTGCGAATATTA
GTAGGATCATGAAGAAGGCTCTTCCTGCTAATGGGAAGATTGCTAAGGATGCTAAAGAAACCGTACAAGAATGTGTATCGGAGTTTATCAGTTTTATTACTAGCGAGGCA
AGTGATAAATGTCAAAGAGAGAAACGGAAGACGATTAATGGTGATGATTTACTTTGGGCCATGGCCACTCTTGGATTTGAGGATTATATCGATCCACTTAAAACCTACTT
GACGAAATACAGAGAGACAGGGTGACACTAAGGGGTCTGCTAAAGGTGGTGATGGGTCAGCTAAGAAAGAAGCTCATCCAACCCCTATTCCTCAGATGGCTCATCAAGGG
TCGTTTTCCCAAGGAGTTAATTATGCAAGTTCTCAATCACAAGCCCAGCATCTGATGGTCCCTATGCAAGGTACTGACTGAAATTGCCTCAAATCGACCATGTAAACTGT
TGAATTTGGAGATCTTTGTTCAGTATAACAGCAAAATTTGAGTCTATTTATTTAAAGTTTGGGTGGTTTTGATACTTTTAATTGTAGAAACAGTTGCAACTTTGTATATT
ATTATGGCTGTCTATTGGATTGGAAGTTAGGACACAGTATTTGATAGAGGTTCCAAGTCCTGGGGATCGCATTTATTCATGCTTGTAAACCTTACAACCTTTGCAAGGTC
TTGTAGGTCTTGAAAAAGACTTGGTAGCAGTAGCACCCTCTGGATTTTTTTTAGAATCATTTTCCTAATCAAAAGAATAAATTGTGCCATGAATGATTTGCTTCTA
Protein sequenceShow/hide protein sequence
MADAPASPGGGSHESGEQSPRSNVREQDRFLPIANISRIMKKALPANGKIAKDAKETVQECVSEFISFITSEASDKCQREKRKTINGDDLLWAMATLGFEDYIDPLKTYL
TKYRETG