; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

MELO3C010507 (gene) of Melon (DHL92) v4 genome

Gene IDMELO3C010507
OrganismCucumis melo DHL92 (Melon (DHL92) v4)
DescriptionReplication factor C subunit 4
Genome locationchr07:7770374..7776011
RNA-Seq ExpressionMELO3C010507
SyntenyMELO3C010507
Gene Ontology termsGO:0006261 - DNA-dependent DNA replication (biological process)
GO:0006281 - DNA repair (biological process)
GO:0006508 - proteolysis (biological process)
GO:0007049 - cell cycle (biological process)
GO:0051301 - cell division (biological process)
GO:0005634 - nucleus (cellular component)
GO:0005663 - DNA replication factor C complex (cellular component)
GO:0009536 - plastid (cellular component)
GO:0008234 - cysteine-type peptidase activity (molecular function)
GO:0016887 - ATPase activity (molecular function)
GO:0003677 - DNA binding (molecular function)
GO:0005524 - ATP binding (molecular function)
GO:0003689 - DNA clamp loader activity (molecular function)
InterPro domainsIPR027417 - P-loop containing nucleoside triphosphate hydrolase
IPR013748 - Replication factor C, C-terminal
IPR008921 - DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal
IPR003959 - ATPase, AAA-type, core
IPR003593 - AAA+ ATPase domain


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0052206.1 replication factor C subunit 4 [Cucumis melo var. makuwa]2.0e-15297.23Show/hide
Query:  MLFYGPPGTGKTTTALAISHQLFGPELYKSRVLELNASDDRGINVVRTKIKDFAGVAVSSGQRQGGYPCPPFKIIILDEADSMTEDAQNALRRTMETHSK
        MLFYGPPGTGKTTTALAISHQLFGPELYKSRVLELNASDDRGINVVRTKIKDFAGVAVSSGQRQGGYPCPPFKIIILDEADSMTEDAQNALRRTMETHSK
Subjt:  MLFYGPPGTGKTTTALAISHQLFGPELYKSRVLELNASDDRGINVVRTKIKDFAGVAVSSGQRQGGYPCPPFKIIILDEADSMTEDAQNALRRTMETHSK

Query:  VTRFFFICNYISRIIEPLASRCAKFRFKPLSEEVMSKRILHISNEEGLSLDGEALSTLSSMSQGDLRRAITYLQSAARLFGSSISSKDLVNVSGIIPREV
        VTRFFFICNYISRIIEPLASRCAKFRFKPLSEEVMSKRILHISNEEGLSLDGEALSTLSSMSQGDLRRAITYLQSAARLFGSSISSKDLVNVSGIIPREV
Subjt:  VTRFFFICNYISRIIEPLASRCAKFRFKPLSEEVMSKRILHISNEEGLSLDGEALSTLSSMSQGDLRRAITYLQSAARLFGSSISSKDLVNVSGIIPREV

Query:  VDALFTACKSGNFDTANKEVNNVLAEGYPVAQMLSQIFEVVIEDNDLQDEQKARICKKLAEADKCLVDGADEYLQLLDVVSQTMQALRS
        VDALFTACKSGNFDTANKEVNNVLAEGYPVAQMLSQIFEVVIEDNDLQDEQKARICKKLAEADKCLVDGADEYLQLLDV+ +     RS
Subjt:  VDALFTACKSGNFDTANKEVNNVLAEGYPVAQMLSQIFEVVIEDNDLQDEQKARICKKLAEADKCLVDGADEYLQLLDVVSQTMQALRS

TYK01775.1 replication factor C subunit 4 [Cucumis melo var. makuwa]2.5e-158100Show/hide
Query:  MLFYGPPGTGKTTTALAISHQLFGPELYKSRVLELNASDDRGINVVRTKIKDFAGVAVSSGQRQGGYPCPPFKIIILDEADSMTEDAQNALRRTMETHSK
        MLFYGPPGTGKTTTALAISHQLFGPELYKSRVLELNASDDRGINVVRTKIKDFAGVAVSSGQRQGGYPCPPFKIIILDEADSMTEDAQNALRRTMETHSK
Subjt:  MLFYGPPGTGKTTTALAISHQLFGPELYKSRVLELNASDDRGINVVRTKIKDFAGVAVSSGQRQGGYPCPPFKIIILDEADSMTEDAQNALRRTMETHSK

Query:  VTRFFFICNYISRIIEPLASRCAKFRFKPLSEEVMSKRILHISNEEGLSLDGEALSTLSSMSQGDLRRAITYLQSAARLFGSSISSKDLVNVSGIIPREV
        VTRFFFICNYISRIIEPLASRCAKFRFKPLSEEVMSKRILHISNEEGLSLDGEALSTLSSMSQGDLRRAITYLQSAARLFGSSISSKDLVNVSGIIPREV
Subjt:  VTRFFFICNYISRIIEPLASRCAKFRFKPLSEEVMSKRILHISNEEGLSLDGEALSTLSSMSQGDLRRAITYLQSAARLFGSSISSKDLVNVSGIIPREV

Query:  VDALFTACKSGNFDTANKEVNNVLAEGYPVAQMLSQIFEVVIEDNDLQDEQKARICKKLAEADKCLVDGADEYLQLLDVVSQTMQALRSMQL
        VDALFTACKSGNFDTANKEVNNVLAEGYPVAQMLSQIFEVVIEDNDLQDEQKARICKKLAEADKCLVDGADEYLQLLDVVSQTMQALRSMQL
Subjt:  VDALFTACKSGNFDTANKEVNNVLAEGYPVAQMLSQIFEVVIEDNDLQDEQKARICKKLAEADKCLVDGADEYLQLLDVVSQTMQALRSMQL

XP_004142636.1 replication factor C subunit 4 [Cucumis sativus]1.3e-15497.26Show/hide
Query:  MLFYGPPGTGKTTTALAISHQLFGPELYKSRVLELNASDDRGINVVRTKIKDFAGVAVSSGQRQGGYPCPPFKIIILDEADSMTEDAQNALRRTMETHSK
        MLFYGPPGTGKTTTALAI+HQLFGPELYKSRVLELNASDDRGINVVRTKIKDFAGVAVSSGQRQGGYPCPPFKIIILDEADSMTEDAQNALRRTMETHSK
Subjt:  MLFYGPPGTGKTTTALAISHQLFGPELYKSRVLELNASDDRGINVVRTKIKDFAGVAVSSGQRQGGYPCPPFKIIILDEADSMTEDAQNALRRTMETHSK

Query:  VTRFFFICNYISRIIEPLASRCAKFRFKPLSEEVMSKRILHISNEEGLSLDGEALSTLSSMSQGDLRRAITYLQSAARLFGSSISSKDLVNVSGIIPREV
        VTRFFFICNYISRIIEPLASRCAKFRFKPLSEEVMSKRILHI NEEGLSLDGEALSTLSS+SQGDLRRAITYLQSAARLFGSSISSKDLVNVSGIIP+EV
Subjt:  VTRFFFICNYISRIIEPLASRCAKFRFKPLSEEVMSKRILHISNEEGLSLDGEALSTLSSMSQGDLRRAITYLQSAARLFGSSISSKDLVNVSGIIPREV

Query:  VDALFTACKSGNFDTANKEVNNVLAEGYPVAQMLSQIFEVVIEDNDLQDEQKARICKKLAEADKCLVDGADEYLQLLDVVSQTMQALRSMQL
        VDALF ACKSGNFDTANK+VNNVLAEGYPVAQMLSQIFEVVIEDNDLQDEQKARICKKLAEADKCLVDGADEYLQLLDVVSQTMQ LRS+QL
Subjt:  VDALFTACKSGNFDTANKEVNNVLAEGYPVAQMLSQIFEVVIEDNDLQDEQKARICKKLAEADKCLVDGADEYLQLLDVVSQTMQALRSMQL

XP_008444196.1 PREDICTED: LOW QUALITY PROTEIN: replication factor C subunit 4 [Cucumis melo]1.6e-15799.66Show/hide
Query:  MLFYGPPGTGKTTTALAISHQLFGPELYKSRVLELNASDDRGINVVRTKIKDFAGVAVSSGQRQGGYPCPPFKIIILDEADSMTEDAQNALRRTMETHSK
        MLFYGPPGTGKTTTALAISHQLFGPELYKSRVLELNASDDRGINVVRTKIKDFAGVAVSSGQRQGGYPCPPFKIIILDEADSMTEDAQNALRRTMETHSK
Subjt:  MLFYGPPGTGKTTTALAISHQLFGPELYKSRVLELNASDDRGINVVRTKIKDFAGVAVSSGQRQGGYPCPPFKIIILDEADSMTEDAQNALRRTMETHSK

Query:  VTRFFFICNYISRIIEPLASRCAKFRFKPLSEEVMSKRILHISNEEGLSLDGEALSTLSSMSQGDLRRAITYLQSAARLFGSSISSKDLVNVSGIIPREV
        VTRF FICNYISRIIEPLASRCAKFRFKPLSEEVMSKRILHISNEEGLSLDGEALSTLSSMSQGDLRRAITYLQSAARLFGSSISSKDLVNVSGIIPREV
Subjt:  VTRFFFICNYISRIIEPLASRCAKFRFKPLSEEVMSKRILHISNEEGLSLDGEALSTLSSMSQGDLRRAITYLQSAARLFGSSISSKDLVNVSGIIPREV

Query:  VDALFTACKSGNFDTANKEVNNVLAEGYPVAQMLSQIFEVVIEDNDLQDEQKARICKKLAEADKCLVDGADEYLQLLDVVSQTMQALRSMQL
        VDALFTACKSGNFDTANKEVNNVLAEGYPVAQMLSQIFEVVIEDNDLQDEQKARICKKLAEADKCLVDGADEYLQLLDVVSQTMQALRSMQL
Subjt:  VDALFTACKSGNFDTANKEVNNVLAEGYPVAQMLSQIFEVVIEDNDLQDEQKARICKKLAEADKCLVDGADEYLQLLDVVSQTMQALRSMQL

XP_038897028.1 replication factor C subunit 4 [Benincasa hispida]2.6e-15597.95Show/hide
Query:  MLFYGPPGTGKTTTALAISHQLFGPELYKSRVLELNASDDRGINVVRTKIKDFAGVAVSSGQRQGGYPCPPFKIIILDEADSMTEDAQNALRRTMETHSK
        MLFYGPPGTGKTTTALAISHQLFGPELYKSRVLELNASDDRGINVVRTKIKDFAGVAVSSGQRQGGYPCPPFKIIILDEADSMTEDAQNALRRTMETHSK
Subjt:  MLFYGPPGTGKTTTALAISHQLFGPELYKSRVLELNASDDRGINVVRTKIKDFAGVAVSSGQRQGGYPCPPFKIIILDEADSMTEDAQNALRRTMETHSK

Query:  VTRFFFICNYISRIIEPLASRCAKFRFKPLSEEVMSKRILHISNEEGLSLDGEALSTLSSMSQGDLRRAITYLQSAARLFGSSISSKDLVNVSGIIPREV
        VTRFFFICNYISRIIEPLASRCAKFRFKPLSEEVMSKRILHISNEEGLSLDGEALSTLSS+SQGDLRRAITYLQSAARLFGSSISSKDLV+VSGIIPREV
Subjt:  VTRFFFICNYISRIIEPLASRCAKFRFKPLSEEVMSKRILHISNEEGLSLDGEALSTLSSMSQGDLRRAITYLQSAARLFGSSISSKDLVNVSGIIPREV

Query:  VDALFTACKSGNFDTANKEVNNVLAEGYPVAQMLSQIFEVVIEDNDLQDEQKARICKKLAEADKCLVDGADEYLQLLDVVSQTMQALRSMQL
        VDALF+ACKSGNFD ANKEVNNVLAEGYPVAQMLSQIFEVV+EDNDLQDEQKARICKKLAEADKCLVDGADEYLQLLDVVSQTMQAL SMQL
Subjt:  VDALFTACKSGNFDTANKEVNNVLAEGYPVAQMLSQIFEVVIEDNDLQDEQKARICKKLAEADKCLVDGADEYLQLLDVVSQTMQALRSMQL

TrEMBL top hitse value%identityAlignment
A0A0A0KYI8 AAA domain-containing protein6.2e-15597.26Show/hide
Query:  MLFYGPPGTGKTTTALAISHQLFGPELYKSRVLELNASDDRGINVVRTKIKDFAGVAVSSGQRQGGYPCPPFKIIILDEADSMTEDAQNALRRTMETHSK
        MLFYGPPGTGKTTTALAI+HQLFGPELYKSRVLELNASDDRGINVVRTKIKDFAGVAVSSGQRQGGYPCPPFKIIILDEADSMTEDAQNALRRTMETHSK
Subjt:  MLFYGPPGTGKTTTALAISHQLFGPELYKSRVLELNASDDRGINVVRTKIKDFAGVAVSSGQRQGGYPCPPFKIIILDEADSMTEDAQNALRRTMETHSK

Query:  VTRFFFICNYISRIIEPLASRCAKFRFKPLSEEVMSKRILHISNEEGLSLDGEALSTLSSMSQGDLRRAITYLQSAARLFGSSISSKDLVNVSGIIPREV
        VTRFFFICNYISRIIEPLASRCAKFRFKPLSEEVMSKRILHI NEEGLSLDGEALSTLSS+SQGDLRRAITYLQSAARLFGSSISSKDLVNVSGIIP+EV
Subjt:  VTRFFFICNYISRIIEPLASRCAKFRFKPLSEEVMSKRILHISNEEGLSLDGEALSTLSSMSQGDLRRAITYLQSAARLFGSSISSKDLVNVSGIIPREV

Query:  VDALFTACKSGNFDTANKEVNNVLAEGYPVAQMLSQIFEVVIEDNDLQDEQKARICKKLAEADKCLVDGADEYLQLLDVVSQTMQALRSMQL
        VDALF ACKSGNFDTANK+VNNVLAEGYPVAQMLSQIFEVVIEDNDLQDEQKARICKKLAEADKCLVDGADEYLQLLDVVSQTMQ LRS+QL
Subjt:  VDALFTACKSGNFDTANKEVNNVLAEGYPVAQMLSQIFEVVIEDNDLQDEQKARICKKLAEADKCLVDGADEYLQLLDVVSQTMQALRSMQL

A0A1S3B9T6 LOW QUALITY PROTEIN: replication factor C subunit 47.8e-15899.66Show/hide
Query:  MLFYGPPGTGKTTTALAISHQLFGPELYKSRVLELNASDDRGINVVRTKIKDFAGVAVSSGQRQGGYPCPPFKIIILDEADSMTEDAQNALRRTMETHSK
        MLFYGPPGTGKTTTALAISHQLFGPELYKSRVLELNASDDRGINVVRTKIKDFAGVAVSSGQRQGGYPCPPFKIIILDEADSMTEDAQNALRRTMETHSK
Subjt:  MLFYGPPGTGKTTTALAISHQLFGPELYKSRVLELNASDDRGINVVRTKIKDFAGVAVSSGQRQGGYPCPPFKIIILDEADSMTEDAQNALRRTMETHSK

Query:  VTRFFFICNYISRIIEPLASRCAKFRFKPLSEEVMSKRILHISNEEGLSLDGEALSTLSSMSQGDLRRAITYLQSAARLFGSSISSKDLVNVSGIIPREV
        VTRF FICNYISRIIEPLASRCAKFRFKPLSEEVMSKRILHISNEEGLSLDGEALSTLSSMSQGDLRRAITYLQSAARLFGSSISSKDLVNVSGIIPREV
Subjt:  VTRFFFICNYISRIIEPLASRCAKFRFKPLSEEVMSKRILHISNEEGLSLDGEALSTLSSMSQGDLRRAITYLQSAARLFGSSISSKDLVNVSGIIPREV

Query:  VDALFTACKSGNFDTANKEVNNVLAEGYPVAQMLSQIFEVVIEDNDLQDEQKARICKKLAEADKCLVDGADEYLQLLDVVSQTMQALRSMQL
        VDALFTACKSGNFDTANKEVNNVLAEGYPVAQMLSQIFEVVIEDNDLQDEQKARICKKLAEADKCLVDGADEYLQLLDVVSQTMQALRSMQL
Subjt:  VDALFTACKSGNFDTANKEVNNVLAEGYPVAQMLSQIFEVVIEDNDLQDEQKARICKKLAEADKCLVDGADEYLQLLDVVSQTMQALRSMQL

A0A5A7UDC8 Replication factor C subunit 49.8e-15397.23Show/hide
Query:  MLFYGPPGTGKTTTALAISHQLFGPELYKSRVLELNASDDRGINVVRTKIKDFAGVAVSSGQRQGGYPCPPFKIIILDEADSMTEDAQNALRRTMETHSK
        MLFYGPPGTGKTTTALAISHQLFGPELYKSRVLELNASDDRGINVVRTKIKDFAGVAVSSGQRQGGYPCPPFKIIILDEADSMTEDAQNALRRTMETHSK
Subjt:  MLFYGPPGTGKTTTALAISHQLFGPELYKSRVLELNASDDRGINVVRTKIKDFAGVAVSSGQRQGGYPCPPFKIIILDEADSMTEDAQNALRRTMETHSK

Query:  VTRFFFICNYISRIIEPLASRCAKFRFKPLSEEVMSKRILHISNEEGLSLDGEALSTLSSMSQGDLRRAITYLQSAARLFGSSISSKDLVNVSGIIPREV
        VTRFFFICNYISRIIEPLASRCAKFRFKPLSEEVMSKRILHISNEEGLSLDGEALSTLSSMSQGDLRRAITYLQSAARLFGSSISSKDLVNVSGIIPREV
Subjt:  VTRFFFICNYISRIIEPLASRCAKFRFKPLSEEVMSKRILHISNEEGLSLDGEALSTLSSMSQGDLRRAITYLQSAARLFGSSISSKDLVNVSGIIPREV

Query:  VDALFTACKSGNFDTANKEVNNVLAEGYPVAQMLSQIFEVVIEDNDLQDEQKARICKKLAEADKCLVDGADEYLQLLDVVSQTMQALRS
        VDALFTACKSGNFDTANKEVNNVLAEGYPVAQMLSQIFEVVIEDNDLQDEQKARICKKLAEADKCLVDGADEYLQLLDV+ +     RS
Subjt:  VDALFTACKSGNFDTANKEVNNVLAEGYPVAQMLSQIFEVVIEDNDLQDEQKARICKKLAEADKCLVDGADEYLQLLDVVSQTMQALRS

A0A5D3BRF2 Replication factor C subunit 41.2e-158100Show/hide
Query:  MLFYGPPGTGKTTTALAISHQLFGPELYKSRVLELNASDDRGINVVRTKIKDFAGVAVSSGQRQGGYPCPPFKIIILDEADSMTEDAQNALRRTMETHSK
        MLFYGPPGTGKTTTALAISHQLFGPELYKSRVLELNASDDRGINVVRTKIKDFAGVAVSSGQRQGGYPCPPFKIIILDEADSMTEDAQNALRRTMETHSK
Subjt:  MLFYGPPGTGKTTTALAISHQLFGPELYKSRVLELNASDDRGINVVRTKIKDFAGVAVSSGQRQGGYPCPPFKIIILDEADSMTEDAQNALRRTMETHSK

Query:  VTRFFFICNYISRIIEPLASRCAKFRFKPLSEEVMSKRILHISNEEGLSLDGEALSTLSSMSQGDLRRAITYLQSAARLFGSSISSKDLVNVSGIIPREV
        VTRFFFICNYISRIIEPLASRCAKFRFKPLSEEVMSKRILHISNEEGLSLDGEALSTLSSMSQGDLRRAITYLQSAARLFGSSISSKDLVNVSGIIPREV
Subjt:  VTRFFFICNYISRIIEPLASRCAKFRFKPLSEEVMSKRILHISNEEGLSLDGEALSTLSSMSQGDLRRAITYLQSAARLFGSSISSKDLVNVSGIIPREV

Query:  VDALFTACKSGNFDTANKEVNNVLAEGYPVAQMLSQIFEVVIEDNDLQDEQKARICKKLAEADKCLVDGADEYLQLLDVVSQTMQALRSMQL
        VDALFTACKSGNFDTANKEVNNVLAEGYPVAQMLSQIFEVVIEDNDLQDEQKARICKKLAEADKCLVDGADEYLQLLDVVSQTMQALRSMQL
Subjt:  VDALFTACKSGNFDTANKEVNNVLAEGYPVAQMLSQIFEVVIEDNDLQDEQKARICKKLAEADKCLVDGADEYLQLLDVVSQTMQALRSMQL

A0A6J1IVB8 replication factor C subunit 41.0e-14994.54Show/hide
Query:  MLFYGPPGTGKTTTALAISHQLFGPELYKSRVLELNASDDRGINVVRTKIKDFAGVAVSSGQRQGGYPCPPFKIIILDEADSMTEDAQNALRRTMETHSK
        MLFYGPPGTGKTTTALAI+H+LFGPELYKSRVLELNASDDRGINVVRTKIKDFAGVAVSSGQRQGGYPCPPFKIIILDEADSMTEDAQNALRRTMETHS 
Subjt:  MLFYGPPGTGKTTTALAISHQLFGPELYKSRVLELNASDDRGINVVRTKIKDFAGVAVSSGQRQGGYPCPPFKIIILDEADSMTEDAQNALRRTMETHSK

Query:  VTRFFFICNYISRIIEPLASRCAKFRFKPLSEEVMSKRILHISNEEGLSLDGEALSTLSSMSQGDLRRAITYLQSAARLFGSSISSKDLVNVSGIIPREV
        VTRFFFICNYISRIIEPLASRCAKFRFKPLSEEVMSKRILHISNEEGLSLDGEALSTL S+SQGDLRRAITYLQSAARLFGSSISSKDL++VSGIIPREV
Subjt:  VTRFFFICNYISRIIEPLASRCAKFRFKPLSEEVMSKRILHISNEEGLSLDGEALSTLSSMSQGDLRRAITYLQSAARLFGSSISSKDLVNVSGIIPREV

Query:  VDALFTACKSGNFDTANKEVNNVLAEGYPVAQMLSQIFEVVIEDNDLQDEQKARICKKLAEADKCLVDGADEYLQLLDVVSQTMQAL-RSMQL
        VD LF ACKSGNFD ANKEVNNV+AEGYPVAQMLSQIFEVVIE +DLQDEQKA+ICKKLAEADKCLVDGADEYLQLLDVVSQTMQAL  SMQL
Subjt:  VDALFTACKSGNFDTANKEVNNVLAEGYPVAQMLSQIFEVVIEDNDLQDEQKARICKKLAEADKCLVDGADEYLQLLDVVSQTMQAL-RSMQL

SwissProt top hitse value%identityAlignment
P35249 Replication factor C subunit 41.1e-8956.94Show/hide
Query:  MLFYGPPGTGKTTTALAISHQLFGPELYKSRVLELNASDDRGINVVRTKIKDFAGVAVSSGQRQGGYPCPPFKIIILDEADSMTEDAQNALRRTMETHSK
        +LFYGPPGTGKT+T LA + +LFGPEL++ RVLELNASD+RGI VVR K+K+FA + V SG R  G PCPPFKI+ILDEADSMT  AQ ALRRTME  SK
Subjt:  MLFYGPPGTGKTTTALAISHQLFGPELYKSRVLELNASDDRGINVVRTKIKDFAGVAVSSGQRQGGYPCPPFKIIILDEADSMTEDAQNALRRTMETHSK

Query:  VTRFFFICNYISRIIEPLASRCAKFRFKPLSEEVMSKRILHISNEEGLSLDGEALSTLSSMSQGDLRRAITYLQSAARLF-GSSISSKDLVNVSGIIPRE
         TRF  ICNY+SRIIEPL SRC+KFRFKPLS+++  +R+L I+ +E + +  E ++ L  +S+GDLR+AIT+LQSA RL  G  I+ K + +++G+IP E
Subjt:  VTRFFFICNYISRIIEPLASRCAKFRFKPLSEEVMSKRILHISNEEGLSLDGEALSTLSSMSQGDLRRAITYLQSAARLF-GSSISSKDLVNVSGIIPRE

Query:  VVDALFTACKSGNFDTANKEVNNVLAEGYPVAQMLSQIFEVVIEDNDLQDEQKARICKKLAEADKCLVDGADEYLQLLDVVSQTMQAL
         +D +F AC+SG+FD     V +++ EG+   Q+++Q+ +VV+E N+L D+QK+ I +KLAE DKCL DGADE+LQL+ + +  MQ L
Subjt:  VVDALFTACKSGNFDTANKEVNNVLAEGYPVAQMLSQIFEVVIEDNDLQDEQKARICKKLAEADKCLVDGADEYLQLLDVVSQTMQAL

Q54MD4 Probable replication factor C subunit 43.0e-8252.6Show/hide
Query:  MLFYGPPGTGKTTTALAISHQLFGPELYKSRVLELNASDDRGINVVRTKIKDFAGVAVSSGQRQGGYPCPPFKIIILDEADSMTEDAQNALRRTMETHSK
        +LFYGPPGTGKT+T LAI+  ++GPEL K RVLELNASD+RGI VVRTKIK+FAG AV+        P   FK+IILDEADSMT DAQ ALRRT+ET SK
Subjt:  MLFYGPPGTGKTTTALAISHQLFGPELYKSRVLELNASDDRGINVVRTKIKDFAGVAVSSGQRQGGYPCPPFKIIILDEADSMTEDAQNALRRTMETHSK

Query:  VTRFFFICNYISRIIEPLASRCAKFRFKPLSEEVMSKRILHISNEEGLSLDGEALSTLSSMSQGDLRRAITYLQSAARLFGSSISSKDLVNVSGIIPREV
         TRF  +CNYISRII+PLASRCAKFRFKPL      +R+  IS +EG+  +      +  +S GD+R+AITYLQSA R F + IS   + N++G +P ++
Subjt:  VTRFFFICNYISRIIEPLASRCAKFRFKPLSEEVMSKRILHISNEEGLSLDGEALSTLSSMSQGDLRRAITYLQSAARLFGSSISSKDLVNVSGIIPREV

Query:  VDALFTACKSGNFDTANKEVNNVLAEGYPVAQMLSQIFEVVIEDNDLQDEQKARICKKLAEADKCLVDGADEYLQLLDVVSQTMQALRS
        +  L   CK  +FD     V +++A+GYPV+Q++SQ+F+ V+   DL   QK+ I  K+   D+ L+DG++E+LQL D+ S  M+ L +
Subjt:  VDALFTACKSGNFDTANKEVNNVLAEGYPVAQMLSQIFEVVIEDNDLQDEQKARICKKLAEADKCLVDGADEYLQLLDVVSQTMQALRS

Q93ZX1 Replication factor C subunit 42.9e-13382.82Show/hide
Query:  MLFYGPPGTGKTTTALAISHQLFGPELYKSRVLELNASDDRGINVVRTKIKDFAGVAVSSGQRQGGYPCPPFKIIILDEADSMTEDAQNALRRTMETHSK
        MLFYGPPGTGKTTTALAI+HQLFGPELYKSRVLELNASDDRGINVVRTKIKDFA VAV S  RQ GYPCP FKIIILDEADSMTEDAQNALRRTMET+SK
Subjt:  MLFYGPPGTGKTTTALAISHQLFGPELYKSRVLELNASDDRGINVVRTKIKDFAGVAVSSGQRQGGYPCPPFKIIILDEADSMTEDAQNALRRTMETHSK

Query:  VTRFFFICNYISRIIEPLASRCAKFRFKPLSEEVMSKRILHISNEEGLSLDGEALSTLSSMSQGDLRRAITYLQSAARLFGSSISSKDLVNVSGIIPREV
        VTRFFFICNYISRIIEPLASRCAKFRFKPLSEEVMS RILHI NEEGLSLDGEALSTLSS+SQGDLRRAITYLQSA RLFGS+I+S DL+NVSG++P EV
Subjt:  VTRFFFICNYISRIIEPLASRCAKFRFKPLSEEVMSKRILHISNEEGLSLDGEALSTLSSMSQGDLRRAITYLQSAARLFGSSISSKDLVNVSGIIPREV

Query:  VDALFTACKSGNFDTANKEVNNVLAEGYPVAQMLSQIFEVVIE-DNDLQDEQKARICKKLAEADKCLVDGADEYLQLLDVVSQTMQALRSM
        V+ LFTACKSG+FD ANKEV+N++AEGYP +Q+++Q+F++V E D+D+ D QKA+ICK LAE DK LVDGADEYLQLLDV S T+ AL  M
Subjt:  VDALFTACKSGNFDTANKEVNNVLAEGYPVAQMLSQIFEVVIE-DNDLQDEQKARICKKLAEADKCLVDGADEYLQLLDVVSQTMQALRSM

Q99J62 Replication factor C subunit 46.7e-9056.25Show/hide
Query:  MLFYGPPGTGKTTTALAISHQLFGPELYKSRVLELNASDDRGINVVRTKIKDFAGVAVSSGQRQGGYPCPPFKIIILDEADSMTEDAQNALRRTMETHSK
        +LFYGPPGTGKT+T LA + +LFGPEL++ RVLELNASD+RGI VVR K+K+FA + V SG R  G PCPPFKI+ILDEADSMT  AQ ALRRTME  SK
Subjt:  MLFYGPPGTGKTTTALAISHQLFGPELYKSRVLELNASDDRGINVVRTKIKDFAGVAVSSGQRQGGYPCPPFKIIILDEADSMTEDAQNALRRTMETHSK

Query:  VTRFFFICNYISRIIEPLASRCAKFRFKPLSEEVMSKRILHISNEEGLSLDGEALSTLSSMSQGDLRRAITYLQSAARLFGSSISSKDLV-NVSGIIPRE
         TRF  ICNY+SRIIEPL SRC+KFRFKPLS+++  +R+L I+ +E + +  E ++ L  +S+GDLR+AIT+LQSA RL G    S+D++ +++G+IP  
Subjt:  VTRFFFICNYISRIIEPLASRCAKFRFKPLSEEVMSKRILHISNEEGLSLDGEALSTLSSMSQGDLRRAITYLQSAARLFGSSISSKDLV-NVSGIIPRE

Query:  VVDALFTACKSGNFDTANKEVNNVLAEGYPVAQMLSQIFEVVIEDNDLQDEQKARICKKLAEADKCLVDGADEYLQLLDVVSQTMQAL
         +D +FTAC SG+FD     V N++ EG+   Q+++Q+ + +IE+ +L D+ K+ I +KLAE DKCL DGADE+LQL+ + +  MQ L
Subjt:  VVDALFTACKSGNFDTANKEVNNVLAEGYPVAQMLSQIFEVVIEDNDLQDEQKARICKKLAEADKCLVDGADEYLQLLDVVSQTMQAL

Q9FXM3 Replication factor C subunit 21.1e-13281.38Show/hide
Query:  MLFYGPPGTGKTTTALAISHQLFGPELYKSRVLELNASDDRGINVVRTKIKDFAGVAVSSGQRQGGYPCPPFKIIILDEADSMTEDAQNALRRTMETHSK
        MLFYGPPGTGKTTTALAI++QL+GPELYKSRVLELNASDDRGINVVRTKIKDFA VAV S  R+GGYPCPP+KIIILDEADSMTEDAQNALRRTMET+SK
Subjt:  MLFYGPPGTGKTTTALAISHQLFGPELYKSRVLELNASDDRGINVVRTKIKDFAGVAVSSGQRQGGYPCPPFKIIILDEADSMTEDAQNALRRTMETHSK

Query:  VTRFFFICNYISRIIEPLASRCAKFRFKPLSEEVMSKRILHISNEEGLSLDGEALSTLSSMSQGDLRRAITYLQSAARLFGSSISSKDLVNVSGIIPREV
        VTRFFFICNYISRIIEPLASRCAKFRFKPLSEEVMS RILHI NEEGLSLD +AL+TLS++S GDLRRAITYLQSAARLFGSSISS DL++VSG IP +V
Subjt:  VTRFFFICNYISRIIEPLASRCAKFRFKPLSEEVMSKRILHISNEEGLSLDGEALSTLSSMSQGDLRRAITYLQSAARLFGSSISSKDLVNVSGIIPREV

Query:  VDALFTACKSGNFDTANKEVNNVLAEGYPVAQMLSQIFEVVIEDNDLQDEQKARICKKLAEADKCLVDGADEYLQLLDVVSQTMQALRSM
        V +L  +CKSG FD ANKEVNN++A+GYPV+Q++SQ  +V++  +D+ DEQKARICKKL EADKCLVDGADEYLQLLDV S+T++AL  M
Subjt:  VDALFTACKSGNFDTANKEVNNVLAEGYPVAQMLSQIFEVVIEDNDLQDEQKARICKKLAEADKCLVDGADEYLQLLDVVSQTMQALRSM

Arabidopsis top hitse value%identityAlignment
AT1G21690.1 ATPase family associated with various cellular activities (AAA)2.0e-13482.82Show/hide
Query:  MLFYGPPGTGKTTTALAISHQLFGPELYKSRVLELNASDDRGINVVRTKIKDFAGVAVSSGQRQGGYPCPPFKIIILDEADSMTEDAQNALRRTMETHSK
        MLFYGPPGTGKTTTALAI+HQLFGPELYKSRVLELNASDDRGINVVRTKIKDFA VAV S  RQ GYPCP FKIIILDEADSMTEDAQNALRRTMET+SK
Subjt:  MLFYGPPGTGKTTTALAISHQLFGPELYKSRVLELNASDDRGINVVRTKIKDFAGVAVSSGQRQGGYPCPPFKIIILDEADSMTEDAQNALRRTMETHSK

Query:  VTRFFFICNYISRIIEPLASRCAKFRFKPLSEEVMSKRILHISNEEGLSLDGEALSTLSSMSQGDLRRAITYLQSAARLFGSSISSKDLVNVSGIIPREV
        VTRFFFICNYISRIIEPLASRCAKFRFKPLSEEVMS RILHI NEEGLSLDGEALSTLSS+SQGDLRRAITYLQSA RLFGS+I+S DL+NVSG++P EV
Subjt:  VTRFFFICNYISRIIEPLASRCAKFRFKPLSEEVMSKRILHISNEEGLSLDGEALSTLSSMSQGDLRRAITYLQSAARLFGSSISSKDLVNVSGIIPREV

Query:  VDALFTACKSGNFDTANKEVNNVLAEGYPVAQMLSQIFEVVIE-DNDLQDEQKARICKKLAEADKCLVDGADEYLQLLDVVSQTMQALRSM
        V+ LFTACKSG+FD ANKEV+N++AEGYP +Q+++Q+F++V E D+D+ D QKA+ICK LAE DK LVDGADEYLQLLDV S T+ AL  M
Subjt:  VDALFTACKSGNFDTANKEVNNVLAEGYPVAQMLSQIFEVVIE-DNDLQDEQKARICKKLAEADKCLVDGADEYLQLLDVVSQTMQALRSM

AT1G21690.2 ATPase family associated with various cellular activities (AAA)2.0e-13482.82Show/hide
Query:  MLFYGPPGTGKTTTALAISHQLFGPELYKSRVLELNASDDRGINVVRTKIKDFAGVAVSSGQRQGGYPCPPFKIIILDEADSMTEDAQNALRRTMETHSK
        MLFYGPPGTGKTTTALAI+HQLFGPELYKSRVLELNASDDRGINVVRTKIKDFA VAV S  RQ GYPCP FKIIILDEADSMTEDAQNALRRTMET+SK
Subjt:  MLFYGPPGTGKTTTALAISHQLFGPELYKSRVLELNASDDRGINVVRTKIKDFAGVAVSSGQRQGGYPCPPFKIIILDEADSMTEDAQNALRRTMETHSK

Query:  VTRFFFICNYISRIIEPLASRCAKFRFKPLSEEVMSKRILHISNEEGLSLDGEALSTLSSMSQGDLRRAITYLQSAARLFGSSISSKDLVNVSGIIPREV
        VTRFFFICNYISRIIEPLASRCAKFRFKPLSEEVMS RILHI NEEGLSLDGEALSTLSS+SQGDLRRAITYLQSA RLFGS+I+S DL+NVSG++P EV
Subjt:  VTRFFFICNYISRIIEPLASRCAKFRFKPLSEEVMSKRILHISNEEGLSLDGEALSTLSSMSQGDLRRAITYLQSAARLFGSSISSKDLVNVSGIIPREV

Query:  VDALFTACKSGNFDTANKEVNNVLAEGYPVAQMLSQIFEVVIE-DNDLQDEQKARICKKLAEADKCLVDGADEYLQLLDVVSQTMQALRSM
        V+ LFTACKSG+FD ANKEV+N++AEGYP +Q+++Q+F++V E D+D+ D QKA+ICK LAE DK LVDGADEYLQLLDV S T+ AL  M
Subjt:  VDALFTACKSGNFDTANKEVNNVLAEGYPVAQMLSQIFEVVIE-DNDLQDEQKARICKKLAEADKCLVDGADEYLQLLDVVSQTMQALRSM

AT1G21690.3 ATPase family associated with various cellular activities (AAA)8.6e-12583.77Show/hide
Query:  MLFYGPPGTGKTTTALAISHQLFGPELYKSRVLELNASDDRGINVVRTKIKDFAGVAVSSGQRQGGYPCPPFKIIILDEADSMTEDAQNALRRTMETHSK
        MLFYGPPGTGKTTTALAI+HQLFGPELYKSRVLELNASDDRGINVVRTKIKDFA VAV S  RQ GYPCP FKIIILDEADSMTEDAQNALRRTMET+SK
Subjt:  MLFYGPPGTGKTTTALAISHQLFGPELYKSRVLELNASDDRGINVVRTKIKDFAGVAVSSGQRQGGYPCPPFKIIILDEADSMTEDAQNALRRTMETHSK

Query:  VTRFFFICNYISRIIEPLASRCAKFRFKPLSEEVMSKRILHISNEEGLSLDGEALSTLSSMSQGDLRRAITYLQSAARLFGSSISSKDLVNVSGIIPREV
        VTRFFFICNYISRIIEPLASRCAKFRFKPLSEEVMS RILHI NEEGLSLDGEALSTLSS+SQGDLRRAITYLQSA RLFGS+I+S DL+NVSG++P EV
Subjt:  VTRFFFICNYISRIIEPLASRCAKFRFKPLSEEVMSKRILHISNEEGLSLDGEALSTLSSMSQGDLRRAITYLQSAARLFGSSISSKDLVNVSGIIPREV

Query:  VDALFTACKSGNFDTANKEVNNVLAEGYPVAQMLSQIFEVVIE-DNDLQDEQKARICKKLAEADK
        V+ LFTACKSG+FD ANKEV+N++AEGYP +Q+++Q+F++V E D+D+ D QKA+ICK LAE DK
Subjt:  VDALFTACKSGNFDTANKEVNNVLAEGYPVAQMLSQIFEVVIE-DNDLQDEQKARICKKLAEADK

AT1G21690.4 ATPase family associated with various cellular activities (AAA)4.8e-12880.41Show/hide
Query:  MLFYGPPGTGKTTTALAISHQLFGPELYKSRVLELNASDDRGINVVRTKIKDFAGVAVSSGQRQGGYPCPPFKIIILDEADSMTEDAQNALRRTMETHSK
        MLFYGPPGTGKTTTALAI+HQLFG       VLELNASDDRGINVVRTKIKDFA VAV S  RQ GYPCP FKIIILDEADSMTEDAQNALRRTMET+SK
Subjt:  MLFYGPPGTGKTTTALAISHQLFGPELYKSRVLELNASDDRGINVVRTKIKDFAGVAVSSGQRQGGYPCPPFKIIILDEADSMTEDAQNALRRTMETHSK

Query:  VTRFFFICNYISRIIEPLASRCAKFRFKPLSEEVMSKRILHISNEEGLSLDGEALSTLSSMSQGDLRRAITYLQSAARLFGSSISSKDLVNVSGIIPREV
        VTRFFFICNYISRIIEPLASRCAKFRFKPLSEEVMS RILHI NEEGLSLDGEALSTLSS+SQGDLRRAITYLQSA RLFGS+I+S DL+NVSG++P EV
Subjt:  VTRFFFICNYISRIIEPLASRCAKFRFKPLSEEVMSKRILHISNEEGLSLDGEALSTLSSMSQGDLRRAITYLQSAARLFGSSISSKDLVNVSGIIPREV

Query:  VDALFTACKSGNFDTANKEVNNVLAEGYPVAQMLSQIFEVVIE-DNDLQDEQKARICKKLAEADKCLVDGADEYLQLLDVVSQTMQALRSM
        V+ LFTACKSG+FD ANKEV+N++AEGYP +Q+++Q+F++V E D+D+ D QKA+ICK LAE DK LVDGADEYLQLLDV S T+ AL  M
Subjt:  VDALFTACKSGNFDTANKEVNNVLAEGYPVAQMLSQIFEVVIE-DNDLQDEQKARICKKLAEADKCLVDGADEYLQLLDVVSQTMQALRSM

AT1G63160.1 replication factor C 21.5e-4137.67Show/hide
Query:  MLFYGPPGTGKTTTALAISHQLFGPELYKSRVLELNASDDRGINVVRTKIKDFAGVAVSSGQRQGGYPCPPFKIIILDEADSMTEDAQNALRRTMETHSK
        ++  GPPGTGKTT+ LA++H+L G   YK  VLELNASDDRGI+VVR KIK FA       Q++   P    K++ILDEADSMT  AQ ALRRT+E +S 
Subjt:  MLFYGPPGTGKTTTALAISHQLFGPELYKSRVLELNASDDRGINVVRTKIKDFAGVAVSSGQRQGGYPCPPFKIIILDEADSMTEDAQNALRRTMETHSK

Query:  VTRFFFICNYISRIIEPLASRCAKFRFKPLSEEVMSKRILHISNEEGLSLDGEALSTLSSMSQGDLRRAITYLQSAARLFGSSISSKDLVNVSGIIPREV
         TRF   CN  ++IIEP+ SRCA  RF  LS++ +  R+L +   E +    E L  +   + GD+R+A+  LQ+    F S ++ +++  V        
Subjt:  VTRFFFICNYISRIIEPLASRCAKFRFKPLSEEVMSKRILHISNEEGLSLDGEALSTLSSMSQGDLRRAITYLQSAARLFGSSISSKDLVNVSGIIPREV

Query:  VDALFTACKSGNFDTANKEVNNVLAEGYPVAQMLSQIFEVVIEDNDLQDEQKARICKKLAEADKCLVDGADEYLQL------LDVVSQTMQA
        V  +        FD A   +  +   GY    +++ +F  +I++ D+ +  K    K+   A   + DG   YLQL      L +V +T +A
Subjt:  VDALFTACKSGNFDTANKEVNNVLAEGYPVAQMLSQIFEVVIEDNDLQDEQKARICKKLAEADKCLVDGADEYLQL------LDVVSQTMQA


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCTGTTCTATGGACCGCCTGGTACTGGAAAAACCACCACTGCTCTTGCGATTTCCCATCAATTATTCGGTCCTGAACTTTACAAGTCTAGAGTTTTGGAGTTGAATGC
AAGTGATGACCGCGGGATCAATGTTGTTCGGACTAAGATTAAAGATTTTGCTGGTGTTGCAGTAAGCAGTGGCCAACGCCAAGGGGGTTATCCTTGTCCACCCTTCAAGA
TAATCATTTTGGATGAGGCTGATTCAATGACTGAAGATGCTCAGAATGCCTTGAGGCGTACCATGGAAACACACTCCAAAGTGACACGATTCTTTTTTATTTGCAACTAT
ATCAGCAGGATTATAGAGCCCCTTGCATCTAGGTGTGCAAAGTTTAGGTTTAAGCCACTTTCTGAAGAGGTTATGAGTAAGCGTATATTGCACATCAGCAATGAAGAAGG
TCTTAGTCTAGACGGAGAGGCTCTTTCAACCTTAAGTTCAATGTCTCAAGGTGACCTCCGTCGAGCTATCACATATTTACAGTCAGCTGCACGCTTATTTGGATCATCAA
TCTCTTCAAAGGATTTGGTTAACGTGTCTGGGATTATCCCTCGGGAGGTTGTTGATGCACTTTTTACTGCTTGTAAAAGTGGTAACTTCGATACTGCAAACAAGGAAGTC
AACAATGTACTTGCAGAAGGATATCCAGTGGCTCAAATGCTTTCACAGATATTTGAAGTGGTGATTGAAGACAATGATTTGCAAGATGAGCAGAAGGCCAGGATATGCAA
GAAGTTGGCCGAAGCTGACAAGTGTCTCGTTGATGGTGCGGATGAATATTTGCAACTGCTCGATGTGGTAAGTCAAACAATGCAAGCTTTAAGAAGTATGCAACTGTAG
mRNA sequenceShow/hide mRNA sequence
AAGCTAATCCTCTCTCCGACTGAACGCGGGAAAAAAAGTATAAACCCTATTTCCGGTGCCGAGGAGAGTGGATCAGCGGGAGAAGAAATGGCGCCATTGTTGCAGAGCTC
TCAACCATGGGTGGAAAAATATCGACCGAAGCAAGTGAAAGATGTAGCGCATCAGGATGAGGTGGTTCGGGTCCTCACCAACACTCTCGAGACTGCCAGTGTACTTATTA
TCATTGATATCTCTCTCTCTCTTTTTTTTAATGGTGTTTGTAATAATCTTTGCAACTCGGTGTTGATTTTCTATTCAATTGTTGGTTGAATAGTGTCCACATATGCTGTT
CTATGGACCGCCTGGTACTGGAAAAACCACCACTGCTCTTGCGATTTCCCATCAATTATTCGGTCCTGAACTTTACAAGTCTAGAGTTTTGGAGTTGAATGCAAGTGATG
ACCGCGGGATCAATGTTGTTCGGACTAAGATTAAAGATTTTGCTGGTGTTGCAGTAAGCAGTGGCCAACGCCAAGGGGGTTATCCTTGTCCACCCTTCAAGATAATCATT
TTGGATGAGGCTGATTCAATGACTGAAGATGCTCAGAATGCCTTGAGGCGTACCATGGAAACACACTCCAAAGTGACACGATTCTTTTTTATTTGCAACTATATCAGCAG
GATTATAGAGCCCCTTGCATCTAGGTGTGCAAAGTTTAGGTTTAAGCCACTTTCTGAAGAGGTTATGAGTAAGCGTATATTGCACATCAGCAATGAAGAAGGTCTTAGTC
TAGACGGAGAGGCTCTTTCAACCTTAAGTTCAATGTCTCAAGGTGACCTCCGTCGAGCTATCACATATTTACAGTCAGCTGCACGCTTATTTGGATCATCAATCTCTTCA
AAGGATTTGGTTAACGTGTCTGGGATTATCCCTCGGGAGGTTGTTGATGCACTTTTTACTGCTTGTAAAAGTGGTAACTTCGATACTGCAAACAAGGAAGTCAACAATGT
ACTTGCAGAAGGATATCCAGTGGCTCAAATGCTTTCACAGATATTTGAAGTGGTGATTGAAGACAATGATTTGCAAGATGAGCAGAAGGCCAGGATATGCAAGAAGTTGG
CCGAAGCTGACAAGTGTCTCGTTGATGGTGCGGATGAATATTTGCAACTGCTCGATGTGGTAAGTCAAACAATGCAAGCTTTAAGAAGTATGCAACTGTAGATCTTGATT
AAACTCGGGCGGTTTTGGTATCGGATATATCTAACGTATGCCATTTAGTATATAGATAAAATGTAACTTTTGACTTGTACAAATTGTTTTAGAATTGTATTGTTTGTAGC
CGCTGAATTGATATGCTCAATCTTGTTTATTTAATCCATCAATTTCTTATGGTTTCTTC
Protein sequenceShow/hide protein sequence
MLFYGPPGTGKTTTALAISHQLFGPELYKSRVLELNASDDRGINVVRTKIKDFAGVAVSSGQRQGGYPCPPFKIIILDEADSMTEDAQNALRRTMETHSKVTRFFFICNY
ISRIIEPLASRCAKFRFKPLSEEVMSKRILHISNEEGLSLDGEALSTLSSMSQGDLRRAITYLQSAARLFGSSISSKDLVNVSGIIPREVVDALFTACKSGNFDTANKEV
NNVLAEGYPVAQMLSQIFEVVIEDNDLQDEQKARICKKLAEADKCLVDGADEYLQLLDVVSQTMQALRSMQL