| GenBank top hits | e value | %identity | Alignment |
|---|
| XP_004142975.1 RNA-binding protein 48 isoform X2 [Cucumis sativus] | 2.7e-54 | 66.67 | Show/hide |
Query: MPRFRDEPLAVRAYTVCDESRYLIVRNVPALGCGDGLHKLFSSYGNLEECKPMDAEECDEFTDVYFVKFHSVTNA-------------------------
MP FRDE LAVRAYTVCDESRYLIVRNVPALGCGD LHKLFSSYGNLEECKPMDAEECDEFTDVYFVKFH VTNA
Subjt: MPRFRDEPLAVRAYTVCDESRYLIVRNVPALGCGDGLHKLFSSYGNLEECKPMDAEECDEFTDVYFVKFHSVTNA-------------------------
Query: ------------------------RPRGSAVSSTTAKLTNPSRSNYTLEQKNSLENRNYGDAALISSPHVSQMTRVSSDQ
RPRG+AVSSTTAKLTN SRS+YTL+QKNSLE RNYGDAALIS+PHVSQ+TRVSSDQ
Subjt: ------------------------RPRGSAVSSTTAKLTNPSRSNYTLEQKNSLENRNYGDAALISSPHVSQMTRVSSDQ
|
|
| XP_008444339.1 PREDICTED: RNA-binding protein 48 isoform X1 [Cucumis melo] | 1.8e-61 | 72.78 | Show/hide |
Query: MPRFRDEPLAVRAYTVCDESRYLIVRNVPALGCGDGLHKLFSSYGNLEECKPMDAEECDEFTDVYFVKFHSVTNA-------------------------
MPRFRDEPLAVRAYTVCDESRYLIVRNVPALGCGDGLHKLFSSYGNLEECKPMDAEECDEFTDVYFVKFHSVTNA
Subjt: MPRFRDEPLAVRAYTVCDESRYLIVRNVPALGCGDGLHKLFSSYGNLEECKPMDAEECDEFTDVYFVKFHSVTNA-------------------------
Query: ------------------------RPRGSAVSSTTAKLTNPSRSNYTLEQKNSLENRNYGDAALISSPHVSQMTRVSSDQ
RPRGSAVSSTTAKLTNPSRSNYTLEQKNSLENRNYGDAALISSPHVSQMTRVSSDQ
Subjt: ------------------------RPRGSAVSSTTAKLTNPSRSNYTLEQKNSLENRNYGDAALISSPHVSQMTRVSSDQ
|
|
| XP_011649485.1 RNA-binding protein 48 isoform X1 [Cucumis sativus] | 5.1e-53 | 66.3 | Show/hide |
Query: MPRFRDEPLAVRAYTVCDESRYLIVRNVPALGCGDGLHKLFSSYGNLEECKPMDAEECDEFTDVYFVKFHSVTNA-------------------------
MP FRDE LAVRAYTVCDESRYLIVRNVPALGCGD LHKLFSSYGNLEECKPMDAEECDEFTDVYFVKFH VTNA
Subjt: MPRFRDEPLAVRAYTVCDESRYLIVRNVPALGCGDGLHKLFSSYGNLEECKPMDAEECDEFTDVYFVKFHSVTNA-------------------------
Query: ------------------------RPRGSAVSSTTAKLTNPSRSNYTLEQKNSLE-NRNYGDAALISSPHVSQMTRVSSDQ
RPRG+AVSSTTAKLTN SRS+YTL+QKNSLE +RNYGDAALIS+PHVSQ+TRVSSDQ
Subjt: ------------------------RPRGSAVSSTTAKLTNPSRSNYTLEQKNSLE-NRNYGDAALISSPHVSQMTRVSSDQ
|
|
| XP_031736618.1 RNA-binding protein 48 isoform X3 [Cucumis sativus] | 5.1e-53 | 66.3 | Show/hide |
Query: MPRFRDEPLAVRAYTVCDESRYLIVRNVPALGCGDGLHKLFSSYGNLEECKPMDAEECDEFTDVYFVKFHSVTNA-------------------------
MP FRDE LAVRAYTVCDESRYLIVRNVPALGCGD LHKLFSSYGNLEECKPMDAEECDEFTDVYFVKFH VTNA
Subjt: MPRFRDEPLAVRAYTVCDESRYLIVRNVPALGCGDGLHKLFSSYGNLEECKPMDAEECDEFTDVYFVKFHSVTNA-------------------------
Query: ------------------------RPRGSAVSSTTAKLTNPSRSNYTLEQKNSLE-NRNYGDAALISSPHVSQMTRVSSDQ
RPRG+AVSSTTAKLTN SRS+YTL+QKNSLE +RNYGDAALIS+PHVSQ+TRVSSDQ
Subjt: ------------------------RPRGSAVSSTTAKLTNPSRSNYTLEQKNSLE-NRNYGDAALISSPHVSQMTRVSSDQ
|
|
| XP_031736619.1 RNA-binding protein 48 isoform X4 [Cucumis sativus] | 2.7e-54 | 66.67 | Show/hide |
Query: MPRFRDEPLAVRAYTVCDESRYLIVRNVPALGCGDGLHKLFSSYGNLEECKPMDAEECDEFTDVYFVKFHSVTNA-------------------------
MP FRDE LAVRAYTVCDESRYLIVRNVPALGCGD LHKLFSSYGNLEECKPMDAEECDEFTDVYFVKFH VTNA
Subjt: MPRFRDEPLAVRAYTVCDESRYLIVRNVPALGCGDGLHKLFSSYGNLEECKPMDAEECDEFTDVYFVKFHSVTNA-------------------------
Query: ------------------------RPRGSAVSSTTAKLTNPSRSNYTLEQKNSLENRNYGDAALISSPHVSQMTRVSSDQ
RPRG+AVSSTTAKLTN SRS+YTL+QKNSLE RNYGDAALIS+PHVSQ+TRVSSDQ
Subjt: ------------------------RPRGSAVSSTTAKLTNPSRSNYTLEQKNSLENRNYGDAALISSPHVSQMTRVSSDQ
|
|
| TrEMBL top hits | e value | %identity | Alignment |
|---|
| A0A0A0LQL2 RNA-binding protein 48 | 1.3e-54 | 66.67 | Show/hide |
Query: MPRFRDEPLAVRAYTVCDESRYLIVRNVPALGCGDGLHKLFSSYGNLEECKPMDAEECDEFTDVYFVKFHSVTNA-------------------------
MP FRDE LAVRAYTVCDESRYLIVRNVPALGCGD LHKLFSSYGNLEECKPMDAEECDEFTDVYFVKFH VTNA
Subjt: MPRFRDEPLAVRAYTVCDESRYLIVRNVPALGCGDGLHKLFSSYGNLEECKPMDAEECDEFTDVYFVKFHSVTNA-------------------------
Query: ------------------------RPRGSAVSSTTAKLTNPSRSNYTLEQKNSLENRNYGDAALISSPHVSQMTRVSSDQ
RPRG+AVSSTTAKLTN SRS+YTL+QKNSLE RNYGDAALIS+PHVSQ+TRVSSDQ
Subjt: ------------------------RPRGSAVSSTTAKLTNPSRSNYTLEQKNSLENRNYGDAALISSPHVSQMTRVSSDQ
|
|
| A0A1S3BA34 RNA-binding protein 48 | 8.5e-62 | 72.78 | Show/hide |
Query: MPRFRDEPLAVRAYTVCDESRYLIVRNVPALGCGDGLHKLFSSYGNLEECKPMDAEECDEFTDVYFVKFHSVTNA-------------------------
MPRFRDEPLAVRAYTVCDESRYLIVRNVPALGCGDGLHKLFSSYGNLEECKPMDAEECDEFTDVYFVKFHSVTNA
Subjt: MPRFRDEPLAVRAYTVCDESRYLIVRNVPALGCGDGLHKLFSSYGNLEECKPMDAEECDEFTDVYFVKFHSVTNA-------------------------
Query: ------------------------RPRGSAVSSTTAKLTNPSRSNYTLEQKNSLENRNYGDAALISSPHVSQMTRVSSDQ
RPRGSAVSSTTAKLTNPSRSNYTLEQKNSLENRNYGDAALISSPHVSQMTRVSSDQ
Subjt: ------------------------RPRGSAVSSTTAKLTNPSRSNYTLEQKNSLENRNYGDAALISSPHVSQMTRVSSDQ
|
|
| A0A5A7V5K4 RNA-binding protein 48 | 8.5e-62 | 72.78 | Show/hide |
Query: MPRFRDEPLAVRAYTVCDESRYLIVRNVPALGCGDGLHKLFSSYGNLEECKPMDAEECDEFTDVYFVKFHSVTNA-------------------------
MPRFRDEPLAVRAYTVCDESRYLIVRNVPALGCGDGLHKLFSSYGNLEECKPMDAEECDEFTDVYFVKFHSVTNA
Subjt: MPRFRDEPLAVRAYTVCDESRYLIVRNVPALGCGDGLHKLFSSYGNLEECKPMDAEECDEFTDVYFVKFHSVTNA-------------------------
Query: ------------------------RPRGSAVSSTTAKLTNPSRSNYTLEQKNSLENRNYGDAALISSPHVSQMTRVSSDQ
RPRGSAVSSTTAKLTNPSRSNYTLEQKNSLENRNYGDAALISSPHVSQMTRVSSDQ
Subjt: ------------------------RPRGSAVSSTTAKLTNPSRSNYTLEQKNSLENRNYGDAALISSPHVSQMTRVSSDQ
|
|
| A0A6J1K5M2 RNA-binding protein 48 | 3.4e-50 | 61.67 | Show/hide |
Query: MPRFRDEPLAVRAYTVCDESRYLIVRNVPALGCGDGLHKLFSSYGNLEECKPMDAEECDEFTDVYFVKFHSVTNA-------------------------
MPR+ +EP AVR YT+CDESRYLIVRNVPALGCGD L KLFSSYGNLEECKPMDAEECDEFTDVYFVKFH V+NA
Subjt: MPRFRDEPLAVRAYTVCDESRYLIVRNVPALGCGDGLHKLFSSYGNLEECKPMDAEECDEFTDVYFVKFHSVTNA-------------------------
Query: ------------------------RPRGSAVSSTTAKLTNPSRSNYTLEQKNSLENRNYGDAALISSPHVSQMTRVSSDQ
RPRGSAV+S T K TNPS S+YTLEQKNSLE RNYGDAAL S+PHVSQ+TRVSSDQ
Subjt: ------------------------RPRGSAVSSTTAKLTNPSRSNYTLEQKNSLENRNYGDAALISSPHVSQMTRVSSDQ
|
|
| A0A6J1KEG7 RNA-binding protein 48 | 1.5e-50 | 61.33 | Show/hide |
Query: MPRFRDEPLAVRAYTVCDESRYLIVRNVPALGCGDGLHKLFSSYGNLEECKPMDAEECDEFTDVYFVKFHSVTNA-------------------------
MPR+ +EP AVR YT+CDESRYLIVRNVPALGCGD L KLFSSYGNLEECKPMDAEECDEFTDVYFVKFH V+NA
Subjt: MPRFRDEPLAVRAYTVCDESRYLIVRNVPALGCGDGLHKLFSSYGNLEECKPMDAEECDEFTDVYFVKFHSVTNA-------------------------
Query: ------------------------RPRGSAVSSTTAKLTNPSRSNYTLEQKNSLENRNYGDAALISSPHVSQMTRVSSDQY
RPRGSAV+S T K TNPS S+YTLEQKNSLE RNYGDAAL S+PHVSQ+TRVSSDQ+
Subjt: ------------------------RPRGSAVSSTTAKLTNPSRSNYTLEQKNSLENRNYGDAALISSPHVSQMTRVSSDQY
|
|
| SwissProt top hits | e value | %identity | Alignment |
|---|
| A4FVJ7 RNA-binding protein 48 | 1.3e-11 | 42.86 | Show/hide |
Query: PRFRD--EPLAVRAYTVCDESRYLIVRNVPALGCGDGLHKLFSSYGNLEECKPMDAEECDEFTDVYFVKFHSVTNAR
P++R+ AV+ YT+ ESRYL+V+ VPA+G L +LF+ YG +EE +P+D ++FT+VY ++F +T+AR
Subjt: PRFRD--EPLAVRAYTVCDESRYLIVRNVPALGCGDGLHKLFSSYGNLEECKPMDAEECDEFTDVYFVKFHSVTNAR
|
|
| Q561R3 RNA-binding protein 48 | 8.1e-09 | 39.13 | Show/hide |
Query: PLAVRAYTVCDESRYLIVRNVPALGCGDGLHKLFSSYGNLEECKPMDAEECDEFTDVYFVKFHSVTNAR
P AV+ YT+ ES+YL+++ VPA+G L + F+ YG +E+ +D ++FT+VY +KF + +AR
Subjt: PLAVRAYTVCDESRYLIVRNVPALGCGDGLHKLFSSYGNLEECKPMDAEECDEFTDVYFVKFHSVTNAR
|
|
| Q5R4U2 RNA-binding protein 48 | 3.6e-09 | 39.13 | Show/hide |
Query: PLAVRAYTVCDESRYLIVRNVPALGCGDGLHKLFSSYGNLEECKPMDAEECDEFTDVYFVKFHSVTNAR
P AV+ YT+ ES+YL+++ VPA+G L + F+ YG +E+ +D ++FT+VY +KF ++ +AR
Subjt: PLAVRAYTVCDESRYLIVRNVPALGCGDGLHKLFSSYGNLEECKPMDAEECDEFTDVYFVKFHSVTNAR
|
|
| Q5RL73 RNA-binding protein 48 | 6.2e-09 | 39.13 | Show/hide |
Query: PLAVRAYTVCDESRYLIVRNVPALGCGDGLHKLFSSYGNLEECKPMDAEECDEFTDVYFVKFHSVTNAR
P AV+ YT+ ES+YL+++ VPA+G L + F+ YG +E+ +D ++FT+VY +KF ++ +AR
Subjt: PLAVRAYTVCDESRYLIVRNVPALGCGDGLHKLFSSYGNLEECKPMDAEECDEFTDVYFVKFHSVTNAR
|
|
| Q8K2X2 RNA-binding protein 48 | 8.1e-09 | 39.13 | Show/hide |
Query: PLAVRAYTVCDESRYLIVRNVPALGCGDGLHKLFSSYGNLEECKPMDAEECDEFTDVYFVKFHSVTNAR
P AV+ YT+ ES+YL+++ VPA+G L + F+ YG +E+ +D ++FT+VY +KF + +AR
Subjt: PLAVRAYTVCDESRYLIVRNVPALGCGDGLHKLFSSYGNLEECKPMDAEECDEFTDVYFVKFHSVTNAR
|
|
| Arabidopsis top hits | e value | %identity | Alignment |
|---|
| AT2G27790.1 RNA-binding (RRM/RBD/RNP motifs) family protein | 1.5e-29 | 72.37 | Show/hide |
Query: MPRFRDEPLAVRAYTVCDESRYLIVRNVPALGCGDGLHKLFSSYGNLEECKPMDAEECDEFTDVYFVKFHSVTNAR
M R++DE AVR YTVCDESRY+IVRNVPALGCGD L +LF +YG +EECKPMDAE+C EFTDVY++KF +TNAR
Subjt: MPRFRDEPLAVRAYTVCDESRYLIVRNVPALGCGDGLHKLFSSYGNLEECKPMDAEECDEFTDVYFVKFHSVTNAR
|
|
| AT2G27790.2 RNA-binding (RRM/RBD/RNP motifs) family protein | 1.5e-29 | 72.37 | Show/hide |
Query: MPRFRDEPLAVRAYTVCDESRYLIVRNVPALGCGDGLHKLFSSYGNLEECKPMDAEECDEFTDVYFVKFHSVTNAR
M R++DE AVR YTVCDESRY+IVRNVPALGCGD L +LF +YG +EECKPMDAE+C EFTDVY++KF +TNAR
Subjt: MPRFRDEPLAVRAYTVCDESRYLIVRNVPALGCGDGLHKLFSSYGNLEECKPMDAEECDEFTDVYFVKFHSVTNAR
|
|
| AT5G27300.1 pentatricopeptide (PPR) repeat-containing protein | 7.0e-24 | 44.27 | Show/hide |
Query: TVCDESRYLIVRNVPALGCGDGLHKLFSSYGNLEECKPMDAEECDEFTDVYFVKFHSVTNAR-----------------PRGSAVSSTTAKLTNPSRSNY
+VCDESRY+IVRNVPALGCGD L +LF +YG +EECKPMDAE+C EFTDVY++KF +TNAR P +VS T KL +R
Subjt: TVCDESRYLIVRNVPALGCGDGLHKLFSSYGNLEECKPMDAEECDEFTDVYFVKFHSVTNAR-----------------PRGSAVSSTTAKLTNPSRSNY
Query: TLEQKNSLENRNYGDAALISSPHVSQMTRVS
L + N + ++ ++ P ++Q S
Subjt: TLEQKNSLENRNYGDAALISSPHVSQMTRVS
|
|
| AT5G27300.2 pentatricopeptide (PPR) repeat-containing protein | 7.0e-24 | 44.27 | Show/hide |
Query: TVCDESRYLIVRNVPALGCGDGLHKLFSSYGNLEECKPMDAEECDEFTDVYFVKFHSVTNAR-----------------PRGSAVSSTTAKLTNPSRSNY
+VCDESRY+IVRNVPALGCGD L +LF +YG +EECKPMDAE+C EFTDVY++KF +TNAR P +VS T KL +R
Subjt: TVCDESRYLIVRNVPALGCGDGLHKLFSSYGNLEECKPMDAEECDEFTDVYFVKFHSVTNAR-----------------PRGSAVSSTTAKLTNPSRSNY
Query: TLEQKNSLENRNYGDAALISSPHVSQMTRVS
L + N + ++ ++ P ++Q S
Subjt: TLEQKNSLENRNYGDAALISSPHVSQMTRVS
|
|
