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MELO3C010952 (gene) of Melon (DHL92) v4 genome

Gene IDMELO3C010952
OrganismCucumis melo DHL92 (Melon (DHL92) v4)
DescriptionDNA polymerase epsilon catalytic subunit A, putative
Genome locationchr03:27449036..27449984
RNA-Seq ExpressionMELO3C010952
SyntenyMELO3C010952
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6585589.1 hypothetical protein SDJN03_18322, partial [Cucurbita argyrosperma subsp. sororia]1.3e-4978.36Show/hide
Query:  MGSLMGGWSSPVLDPKSVKFKRNRSLTKEEIDAYWKSKRKLEEEHLRAISLPVDRYDREKVGIDYKRSSSFPPARDVAVESKFVENKLDRKNLEELEKVG
        MGSLMGGW+SPVLDPKSVKFKRNRSLTKEEI+AYWKSKRKLEEEHLRAIS+PV   DR+ VGIDYKRSSSFP A   A +  F E+ L+RKNLE+L+K G
Subjt:  MGSLMGGWSSPVLDPKSVKFKRNRSLTKEEIDAYWKSKRKLEEEHLRAISLPVDRYDREKVGIDYKRSSSFPPARDVAVESKFVENKLDRKNLEELEKVG

Query:  WWTRSNSAFLNEPPVLDGASKACVSLYGVADVAS
        WW RSNSAFLNEPPVLDGA+KA  S YGV DVAS
Subjt:  WWTRSNSAFLNEPPVLDGASKACVSLYGVADVAS

XP_004152691.1 uncharacterized protein LOC101215562 [Cucumis sativus]2.1e-6889.8Show/hide
Query:  MGSLMGGWSSPVLDPKSVKFKRNRSLTKEEIDAYWKSKRKLEEEHLRAISLPV-DRYDREKVGIDYKRSSSFPPAR-DVAVESKFVENKLDRKNLEELEK
        MGSLMGGW+SPVLDPKSVKFKRNRSLTKEEI+AYWKSKRKLE+EHLRA+SLPV DRYD E VG+DYKRSSSFPPA+ DVAVE+KFVENK+DRKNLEEL+K
Subjt:  MGSLMGGWSSPVLDPKSVKFKRNRSLTKEEIDAYWKSKRKLEEEHLRAISLPV-DRYDREKVGIDYKRSSSFPPAR-DVAVESKFVENKLDRKNLEELEK

Query:  VGWWTRSNSAFLNEPPVLDGASKACVSLYGVADVASCKLNHNNGVGA
        +GWWTRSNSAFLNEPPVLDGASKACVSLYGVADVASCKLNH+NGVGA
Subjt:  VGWWTRSNSAFLNEPPVLDGASKACVSLYGVADVASCKLNHNNGVGA

XP_008444729.1 PREDICTED: uncharacterized protein LOC103487979 [Cucumis melo]5.8e-79100Show/hide
Query:  MGSLMGGWSSPVLDPKSVKFKRNRSLTKEEIDAYWKSKRKLEEEHLRAISLPVDRYDREKVGIDYKRSSSFPPARDVAVESKFVENKLDRKNLEELEKVG
        MGSLMGGWSSPVLDPKSVKFKRNRSLTKEEIDAYWKSKRKLEEEHLRAISLPVDRYDREKVGIDYKRSSSFPPARDVAVESKFVENKLDRKNLEELEKVG
Subjt:  MGSLMGGWSSPVLDPKSVKFKRNRSLTKEEIDAYWKSKRKLEEEHLRAISLPVDRYDREKVGIDYKRSSSFPPARDVAVESKFVENKLDRKNLEELEKVG

Query:  WWTRSNSAFLNEPPVLDGASKACVSLYGVADVASCKLNHNNGVGACLH
        WWTRSNSAFLNEPPVLDGASKACVSLYGVADVASCKLNHNNGVGACLH
Subjt:  WWTRSNSAFLNEPPVLDGASKACVSLYGVADVASCKLNHNNGVGACLH

XP_023002545.1 uncharacterized protein LOC111496358 [Cucurbita maxima]7.3e-5078.36Show/hide
Query:  MGSLMGGWSSPVLDPKSVKFKRNRSLTKEEIDAYWKSKRKLEEEHLRAISLPVDRYDREKVGIDYKRSSSFPPARDVAVESKFVENKLDRKNLEELEKVG
        MGSLMGGW+SPVLDPKSVKFKRNRSLTKEEI+AYWKSKRKLEEEHLRAIS+PV   DR+ VGIDYKRSSSFP A   A +  F E+ L+RKNLE+L+K G
Subjt:  MGSLMGGWSSPVLDPKSVKFKRNRSLTKEEIDAYWKSKRKLEEEHLRAISLPVDRYDREKVGIDYKRSSSFPPARDVAVESKFVENKLDRKNLEELEKVG

Query:  WWTRSNSAFLNEPPVLDGASKACVSLYGVADVAS
        WW RSNSAFLNEPPVLDGA+KA  S YGV DVAS
Subjt:  WWTRSNSAFLNEPPVLDGASKACVSLYGVADVAS

XP_038886573.1 uncharacterized protein LOC120076743 [Benincasa hispida]9.9e-6381.51Show/hide
Query:  MGSLMGGWSSPVLDPKSVKFKRNRSLTKEEIDAYWKSKRKLEEEHLRAISLPVDRY-DREKVGIDYKRSSSFPPARDVAVESKFVENKLDRKNLEELEKV
        MGSLM GW+SPVLDPKSVKFKRNRSLTK+EI+AYWKSK+K EEEHLRAIS+PVDRY DRE VGIDYKRSSSFPPA+DV+ E++F EN L+R+NLE+L+K+
Subjt:  MGSLMGGWSSPVLDPKSVKFKRNRSLTKEEIDAYWKSKRKLEEEHLRAISLPVDRY-DREKVGIDYKRSSSFPPARDVAVESKFVENKLDRKNLEELEKV

Query:  GWWTRSNSAFLNEPPVLDGASKACVSLYGVADVASCKLNHNNGVGA
        GWWTRSNSAFLNEPPVLDGA+K   SLYGVADVASCKLNH+NGVG+
Subjt:  GWWTRSNSAFLNEPPVLDGASKACVSLYGVADVASCKLNHNNGVGA

TrEMBL top hitse value%identityAlignment
A0A0A0LRI3 Uncharacterized protein9.9e-6989.8Show/hide
Query:  MGSLMGGWSSPVLDPKSVKFKRNRSLTKEEIDAYWKSKRKLEEEHLRAISLPV-DRYDREKVGIDYKRSSSFPPAR-DVAVESKFVENKLDRKNLEELEK
        MGSLMGGW+SPVLDPKSVKFKRNRSLTKEEI+AYWKSKRKLE+EHLRA+SLPV DRYD E VG+DYKRSSSFPPA+ DVAVE+KFVENK+DRKNLEEL+K
Subjt:  MGSLMGGWSSPVLDPKSVKFKRNRSLTKEEIDAYWKSKRKLEEEHLRAISLPV-DRYDREKVGIDYKRSSSFPPAR-DVAVESKFVENKLDRKNLEELEK

Query:  VGWWTRSNSAFLNEPPVLDGASKACVSLYGVADVASCKLNHNNGVGA
        +GWWTRSNSAFLNEPPVLDGASKACVSLYGVADVASCKLNH+NGVGA
Subjt:  VGWWTRSNSAFLNEPPVLDGASKACVSLYGVADVASCKLNHNNGVGA

A0A1S3BBS7 uncharacterized protein LOC1034879792.8e-79100Show/hide
Query:  MGSLMGGWSSPVLDPKSVKFKRNRSLTKEEIDAYWKSKRKLEEEHLRAISLPVDRYDREKVGIDYKRSSSFPPARDVAVESKFVENKLDRKNLEELEKVG
        MGSLMGGWSSPVLDPKSVKFKRNRSLTKEEIDAYWKSKRKLEEEHLRAISLPVDRYDREKVGIDYKRSSSFPPARDVAVESKFVENKLDRKNLEELEKVG
Subjt:  MGSLMGGWSSPVLDPKSVKFKRNRSLTKEEIDAYWKSKRKLEEEHLRAISLPVDRYDREKVGIDYKRSSSFPPARDVAVESKFVENKLDRKNLEELEKVG

Query:  WWTRSNSAFLNEPPVLDGASKACVSLYGVADVASCKLNHNNGVGACLH
        WWTRSNSAFLNEPPVLDGASKACVSLYGVADVASCKLNHNNGVGACLH
Subjt:  WWTRSNSAFLNEPPVLDGASKACVSLYGVADVASCKLNHNNGVGACLH

A0A5A7VD66 Putative DNA polymerase epsilon catalytic subunit A2.8e-79100Show/hide
Query:  MGSLMGGWSSPVLDPKSVKFKRNRSLTKEEIDAYWKSKRKLEEEHLRAISLPVDRYDREKVGIDYKRSSSFPPARDVAVESKFVENKLDRKNLEELEKVG
        MGSLMGGWSSPVLDPKSVKFKRNRSLTKEEIDAYWKSKRKLEEEHLRAISLPVDRYDREKVGIDYKRSSSFPPARDVAVESKFVENKLDRKNLEELEKVG
Subjt:  MGSLMGGWSSPVLDPKSVKFKRNRSLTKEEIDAYWKSKRKLEEEHLRAISLPVDRYDREKVGIDYKRSSSFPPARDVAVESKFVENKLDRKNLEELEKVG

Query:  WWTRSNSAFLNEPPVLDGASKACVSLYGVADVASCKLNHNNGVGACLH
        WWTRSNSAFLNEPPVLDGASKACVSLYGVADVASCKLNHNNGVGACLH
Subjt:  WWTRSNSAFLNEPPVLDGASKACVSLYGVADVASCKLNHNNGVGACLH

A0A6J1GI71 uncharacterized protein LOC1114544243.9e-4977.61Show/hide
Query:  MGSLMGGWSSPVLDPKSVKFKRNRSLTKEEIDAYWKSKRKLEEEHLRAISLPVDRYDREKVGIDYKRSSSFPPARDVAVESKFVENKLDRKNLEELEKVG
        MGSLMGGW+SPVLDPKSVKFKRNRSLTKEEI+AYWKSKRKLEEEHLRAIS+PV   D + VGIDYKRSSSFP A   A +  F E+ L+RKNLE+L+K G
Subjt:  MGSLMGGWSSPVLDPKSVKFKRNRSLTKEEIDAYWKSKRKLEEEHLRAISLPVDRYDREKVGIDYKRSSSFPPARDVAVESKFVENKLDRKNLEELEKVG

Query:  WWTRSNSAFLNEPPVLDGASKACVSLYGVADVAS
        WW RSNSAFLNEPPVLDGA+KA  S YGV DVAS
Subjt:  WWTRSNSAFLNEPPVLDGASKACVSLYGVADVAS

A0A6J1KP90 uncharacterized protein LOC1114963583.6e-5078.36Show/hide
Query:  MGSLMGGWSSPVLDPKSVKFKRNRSLTKEEIDAYWKSKRKLEEEHLRAISLPVDRYDREKVGIDYKRSSSFPPARDVAVESKFVENKLDRKNLEELEKVG
        MGSLMGGW+SPVLDPKSVKFKRNRSLTKEEI+AYWKSKRKLEEEHLRAIS+PV   DR+ VGIDYKRSSSFP A   A +  F E+ L+RKNLE+L+K G
Subjt:  MGSLMGGWSSPVLDPKSVKFKRNRSLTKEEIDAYWKSKRKLEEEHLRAISLPVDRYDREKVGIDYKRSSSFPPARDVAVESKFVENKLDRKNLEELEKVG

Query:  WWTRSNSAFLNEPPVLDGASKACVSLYGVADVAS
        WW RSNSAFLNEPPVLDGA+KA  S YGV DVAS
Subjt:  WWTRSNSAFLNEPPVLDGASKACVSLYGVADVAS

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G19530.1 unknown protein2.1e-1539.55Show/hide
Query:  MGSLMGGWSSPVLDPKSVKFKRNRSLTKEEIDAYWKSKRK-LEEEHLRAISLPVDRYDREKVGIDYKRSSSFPPARDVAVESKFVENKLDRKNLEELEKV
        MGSLM GW S V DPKSV  +R +SLT+EEID +WK+K+K  EEEH++A S  V +                  A+  A E K V++  + ++    +  
Subjt:  MGSLMGGWSSPVLDPKSVKFKRNRSLTKEEIDAYWKSKRK-LEEEHLRAISLPVDRYDREKVGIDYKRSSSFPPARDVAVESKFVENKLDRKNLEELEKV

Query:  GWWTRSNSAFLNEPPVLDGASKACVSLYGVADVA
        GWW ++  AFLNEP   +G     VS + VA +A
Subjt:  GWWTRSNSAFLNEPPVLDGASKACVSLYGVADVA


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGCTCTCTAATGGGCGGATGGAGTTCTCCCGTTCTCGATCCTAAATCAGTCAAGTTCAAGAGAAATCGGTCACTTACGAAAGAAGAAATCGACGCATACTGG
AAATCAAAGAGGAAATTGGAGGAAGAACATCTCAGAGCGATTTCTTTGCCGGTGGATCGTTATGATCGCGAAAAAGTCGGAATAGACTACAAAAGATCGAGTTCG
TTTCCGCCGGCGAGGGACGTTGCGGTGGAATCAAAATTTGTAGAGAACAAATTGGACAGGAAAAACCTAGAGGAATTGGAAAAAGTTGGCTGGTGGACGAGGAGC
AATTCGGCGTTTCTGAATGAACCGCCAGTCCTTGACGGCGCTTCAAAAGCTTGCGTGTCGTTGTACGGCGTCGCCGACGTGGCCTCATGTAAGTTGAACCACAAT
AATGGAGTCGGTGCTTGCTTACACTGA
mRNA sequenceShow/hide mRNA sequence
ACTTCATGTAAAAGCCTTGTTTTCGCTCAATTTTTTCCGTGAACCTAAAATTTCAGTAGTAGAGAAATGGGCTCTCTAATGGGCGGATGGAGTTCTCCCGTTCTC
GATCCTAAATCAGTCAAGTTCAAGAGAAATCGGTCACTTACGAAAGAAGAAATCGACGCATACTGGAAATCAAAGAGGAAATTGGAGGAAGAACATCTCAGAGCG
ATTTCTTTGCCGGTGGATCGTTATGATCGCGAAAAAGTCGGAATAGACTACAAAAGATCGAGTTCGTTTCCGCCGGCGAGGGACGTTGCGGTGGAATCAAAATTT
GTAGAGAACAAATTGGACAGGAAAAACCTAGAGGAATTGGAAAAAGTTGGCTGGTGGACGAGGAGCAATTCGGCGTTTCTGAATGAACCGCCAGTCCTTGACGGC
GCTTCAAAAGCTTGCGTGTCGTTGTACGGCGTCGCCGACGTGGCCTCATGTAAGTTGAACCACAATAATGGAGTCGGTGCTTGCTTACACTGAAAGTGTGAAAAA
AAAAAGAAGAAGAGAACTTAAGATCATATGTAATTTATGTAAAATTAATATGAGTTATAAACATGTATTATATAATATATATTTACTCATCGTAAGATTTCAGTT
ATGTTTGGTTTTGTAATTTGTGATTTGAAACTTTTTTTTATGATAATTAATATTTGGTAGTATACA
Protein sequenceShow/hide protein sequence
MGSLMGGWSSPVLDPKSVKFKRNRSLTKEEIDAYWKSKRKLEEEHLRAISLPVDRYDREKVGIDYKRSSSFPPARDVAVESKFVENKLDRKNLEELEKVGWWTRS
NSAFLNEPPVLDGASKACVSLYGVADVASCKLNHNNGVGACLH