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MELO3C011073 (gene) of Melon (DHL92) v4 genome

Gene IDMELO3C011073
OrganismCucumis melo DHL92 (Melon (DHL92) v4)
DescriptionCHCH domain-containing protein
Genome locationchr03:26566907..26569213
RNA-Seq ExpressionMELO3C011073
SyntenyMELO3C011073
Gene Ontology termsGO:0007005 - mitochondrion organization (biological process)
GO:0005634 - nucleus (cellular component)
GO:0005739 - mitochondrion (cellular component)
InterPro domainsIPR009069 - Cysteine alpha-hairpin motif superfamily
IPR010625 - CHCH


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0065106.1 coiled-coil-helix-coiled-coil-helix domain-containing protein 10 [Cucumis melo var. makuwa]2.0e-4699.01Show/hide
Query:  MLGGLGATIAQGMAFGTGSAVAHRAVDAVMGPRTIQHETIDSSASSAPSVANNSGGSDACNVQSKSFQDCLNHYGSDISKCQFYLDMLQECRRSSGSVLG
        MLGGLGATIAQGMAFGTGSAVAHRAVDAVMGPRTIQHETIDSSASSAPSVA+NSGGSDACNVQSKSFQDCLNHYGSDISKCQFYLDMLQECRRSSGSVLG
Subjt:  MLGGLGATIAQGMAFGTGSAVAHRAVDAVMGPRTIQHETIDSSASSAPSVANNSGGSDACNVQSKSFQDCLNHYGSDISKCQFYLDMLQECRRSSGSVLG

Query:  A
        A
Subjt:  A

XP_008444901.1 PREDICTED: uncharacterized protein C6C3.02c-like [Cucumis melo]5.2e-47100Show/hide
Query:  MLGGLGATIAQGMAFGTGSAVAHRAVDAVMGPRTIQHETIDSSASSAPSVANNSGGSDACNVQSKSFQDCLNHYGSDISKCQFYLDMLQECRRSSGSVLG
        MLGGLGATIAQGMAFGTGSAVAHRAVDAVMGPRTIQHETIDSSASSAPSVANNSGGSDACNVQSKSFQDCLNHYGSDISKCQFYLDMLQECRRSSGSVLG
Subjt:  MLGGLGATIAQGMAFGTGSAVAHRAVDAVMGPRTIQHETIDSSASSAPSVANNSGGSDACNVQSKSFQDCLNHYGSDISKCQFYLDMLQECRRSSGSVLG

Query:  A
        A
Subjt:  A

XP_011649682.1 hemiasterlin resistant protein 1 [Cucumis sativus]2.6e-4698.02Show/hide
Query:  MLGGLGATIAQGMAFGTGSAVAHRAVDAVMGPRTIQHETIDSSASSAPSVANNSGGSDACNVQSKSFQDCLNHYGSDISKCQFYLDMLQECRRSSGSVLG
        MLGGLGATIAQGMAFGTGSAVAHRAVDAVMGPRTIQHET+DSSASSAPSVA+NSGGSDACNVQSKSFQDCLNHYGSDISKCQFYLDMLQECRRSSGSVLG
Subjt:  MLGGLGATIAQGMAFGTGSAVAHRAVDAVMGPRTIQHETIDSSASSAPSVANNSGGSDACNVQSKSFQDCLNHYGSDISKCQFYLDMLQECRRSSGSVLG

Query:  A
        A
Subjt:  A

XP_022962551.1 coiled-coil-helix-coiled-coil-helix domain-containing protein 10, mitochondrial [Cucurbita moschata]5.9e-4393.14Show/hide
Query:  MLGGLGATIAQGMAFGTGSAVAHRAVDAVMGPRTIQHETIDSSA-SSAPSVANNSGGSDACNVQSKSFQDCLNHYGSDISKCQFYLDMLQECRRSSGSVL
        MLGGLGATIAQGMAFGTGSAVAHRAVDAVMGPR IQHET+DSS  SSAPSVA+N GGSDACNVQSKSFQDCLNHYGSDISKCQFYLDMLQECR+SSGSVL
Subjt:  MLGGLGATIAQGMAFGTGSAVAHRAVDAVMGPRTIQHETIDSSA-SSAPSVANNSGGSDACNVQSKSFQDCLNHYGSDISKCQFYLDMLQECRRSSGSVL

Query:  GA
        GA
Subjt:  GA

XP_038886373.1 coiled-coil-helix-coiled-coil-helix domain-containing protein 10, mitochondrial-like [Benincasa hispida]2.8e-4597.03Show/hide
Query:  MLGGLGATIAQGMAFGTGSAVAHRAVDAVMGPRTIQHETIDSSASSAPSVANNSGGSDACNVQSKSFQDCLNHYGSDISKCQFYLDMLQECRRSSGSVLG
        MLGGLGATIAQGMAFGTGSAVAHRAVDAVMGPRTIQHETIDSS SSAPSVANN GGSDAC VQSKSFQDCLNHYGSDISKCQFYLDMLQECRRSSGSVLG
Subjt:  MLGGLGATIAQGMAFGTGSAVAHRAVDAVMGPRTIQHETIDSSASSAPSVANNSGGSDACNVQSKSFQDCLNHYGSDISKCQFYLDMLQECRRSSGSVLG

Query:  A
        A
Subjt:  A

TrEMBL top hitse value%identityAlignment
A0A0A0LNY2 CHCH domain-containing protein1.2e-4698.02Show/hide
Query:  MLGGLGATIAQGMAFGTGSAVAHRAVDAVMGPRTIQHETIDSSASSAPSVANNSGGSDACNVQSKSFQDCLNHYGSDISKCQFYLDMLQECRRSSGSVLG
        MLGGLGATIAQGMAFGTGSAVAHRAVDAVMGPRTIQHET+DSSASSAPSVA+NSGGSDACNVQSKSFQDCLNHYGSDISKCQFYLDMLQECRRSSGSVLG
Subjt:  MLGGLGATIAQGMAFGTGSAVAHRAVDAVMGPRTIQHETIDSSASSAPSVANNSGGSDACNVQSKSFQDCLNHYGSDISKCQFYLDMLQECRRSSGSVLG

Query:  A
        A
Subjt:  A

A0A1S3BAZ1 uncharacterized protein C6C3.02c-like2.5e-47100Show/hide
Query:  MLGGLGATIAQGMAFGTGSAVAHRAVDAVMGPRTIQHETIDSSASSAPSVANNSGGSDACNVQSKSFQDCLNHYGSDISKCQFYLDMLQECRRSSGSVLG
        MLGGLGATIAQGMAFGTGSAVAHRAVDAVMGPRTIQHETIDSSASSAPSVANNSGGSDACNVQSKSFQDCLNHYGSDISKCQFYLDMLQECRRSSGSVLG
Subjt:  MLGGLGATIAQGMAFGTGSAVAHRAVDAVMGPRTIQHETIDSSASSAPSVANNSGGSDACNVQSKSFQDCLNHYGSDISKCQFYLDMLQECRRSSGSVLG

Query:  A
        A
Subjt:  A

A0A5A7VFK2 Coiled-coil-helix-coiled-coil-helix domain-containing protein 109.5e-4799.01Show/hide
Query:  MLGGLGATIAQGMAFGTGSAVAHRAVDAVMGPRTIQHETIDSSASSAPSVANNSGGSDACNVQSKSFQDCLNHYGSDISKCQFYLDMLQECRRSSGSVLG
        MLGGLGATIAQGMAFGTGSAVAHRAVDAVMGPRTIQHETIDSSASSAPSVA+NSGGSDACNVQSKSFQDCLNHYGSDISKCQFYLDMLQECRRSSGSVLG
Subjt:  MLGGLGATIAQGMAFGTGSAVAHRAVDAVMGPRTIQHETIDSSASSAPSVANNSGGSDACNVQSKSFQDCLNHYGSDISKCQFYLDMLQECRRSSGSVLG

Query:  A
        A
Subjt:  A

A0A6J1HDK4 coiled-coil-helix-coiled-coil-helix domain-containing protein 10, mitochondrial2.9e-4393.14Show/hide
Query:  MLGGLGATIAQGMAFGTGSAVAHRAVDAVMGPRTIQHETIDSSA-SSAPSVANNSGGSDACNVQSKSFQDCLNHYGSDISKCQFYLDMLQECRRSSGSVL
        MLGGLGATIAQGMAFGTGSAVAHRAVDAVMGPR IQHET+DSS  SSAPSVA+N GGSDACNVQSKSFQDCLNHYGSDISKCQFYLDMLQECR+SSGSVL
Subjt:  MLGGLGATIAQGMAFGTGSAVAHRAVDAVMGPRTIQHETIDSSA-SSAPSVANNSGGSDACNVQSKSFQDCLNHYGSDISKCQFYLDMLQECRRSSGSVL

Query:  GA
        GA
Subjt:  GA

A0A6J1K966 coiled-coil-helix-coiled-coil-helix domain-containing protein 10, mitochondrial-like8.4e-4393.14Show/hide
Query:  MLGGLGATIAQGMAFGTGSAVAHRAVDAVMGPRTIQHETIDSSA-SSAPSVANNSGGSDACNVQSKSFQDCLNHYGSDISKCQFYLDMLQECRRSSGSVL
        MLGGLGATIAQGMAFGTGSAVAHRAVDAVMGPR IQHET+DSS  SSAPSVA N GGSDACNVQSKSFQDCLNHYGSDISKCQFYLDMLQECR+SSGSVL
Subjt:  MLGGLGATIAQGMAFGTGSAVAHRAVDAVMGPRTIQHETIDSSA-SSAPSVANNSGGSDACNVQSKSFQDCLNHYGSDISKCQFYLDMLQECRRSSGSVL

Query:  GA
        GA
Subjt:  GA

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT5G09570.1 Cox19-like CHCH family protein2.0e-2859Show/hide
Query:  LGGLGATIAQGMAFGTGSAVAHRAVDAVMGPRTIQHETIDSSASSAPSVANNSGGSDACNVQSKSFQDCLNHYGSDISKCQFYLDMLQECRRSSGSVLGA
        LG +GA+I +G+A+GTG+A  HR VD+VMGPRT +HET+    S  PS AN      AC++ SK+FQDC+NH+GSDISKCQFY+DML EC+++SGSV+ A
Subjt:  LGGLGATIAQGMAFGTGSAVAHRAVDAVMGPRTIQHETIDSSASSAPSVANNSGGSDACNVQSKSFQDCLNHYGSDISKCQFYLDMLQECRRSSGSVLGA

AT5G64400.1 CONTAINS InterPro DOMAIN/s: CHCH (InterPro:IPR010625)3.8e-3266.67Show/hide
Query:  MLGGLGATIAQGMAFGTGSAVAHRAVDAVMGPRTIQHETID-SSASSAPSVANNSGGSDACNVQSKSFQDCLNHYGSDISKCQFYLDMLQECRRSSGSVL
        M  G+G+TIAQGMAFGTGSAVAHRAVD+VMGPRTIQHE ++ +SAS+AP  A ++  S  C++ +K+FQDC+  YGS+ISKCQFY+DML ECR++SGSV+
Subjt:  MLGGLGATIAQGMAFGTGSAVAHRAVDAVMGPRTIQHETID-SSASSAPSVANNSGGSDACNVQSKSFQDCLNHYGSDISKCQFYLDMLQECRRSSGSVL

Query:  GA
        GA
Subjt:  GA

AT5G64400.2 BEST Arabidopsis thaliana protein match is: Cox19-like CHCH family protein (TAIR:AT5G09570.1)5.0e-1664.29Show/hide
Query:  MLGGLGATIAQGMAFGTGSAVAHRAVDAVMGPRTIQHETID-SSASSAPSVANNSGGSDACNVQSKSFQD
        M  G+G+TIAQGMAFGTGSAVAHRAVD+VMGPRTIQHE ++ +SAS+AP  A ++  S  C++ +K+FQD
Subjt:  MLGGLGATIAQGMAFGTGSAVAHRAVDAVMGPRTIQHETID-SSASSAPSVANNSGGSDACNVQSKSFQD


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCTTGGAGGTCTTGGTGCCACTATTGCTCAAGGTATGGCCTTTGGTACCGGAAGTGCAGTGGCTCACAGGGCTGTTGATGCCGTAATGGGTCCTCGAACCATCCAGCA
TGAGACCATTGATTCATCAGCTTCCTCAGCACCTTCTGTAGCAAACAATTCTGGTGGTTCTGATGCTTGTAATGTTCAGTCAAAATCCTTTCAAGATTGCCTGAACCACT
ATGGAAGTGACATCAGCAAGTGCCAATTCTACTTGGATATGTTGCAGGAATGCCGCAGGAGCTCAGGTTCTGTTTTGGGTGCTTAA
mRNA sequenceShow/hide mRNA sequence
AGAGTTGGATTGGGTTTCTGGCTTAGGGAAGTTCTTGATTTTTTGGATCTGATTTTACGACAAGATTGTTTACAATTTTCTTGGGGGGCGGGGGGTGGACAAAGCTAGGG
TTTGAAGTTGAAGCGTTTGCATTATTTTGCAGGACGATCTGCTCCCCGTCCCGCCGCTCGCGCTCCAGCTCGCAATCCTCCGGCGCCAGTTAATTCCGCTCCTCCACCTG
CACCTGTACAAGGTGGTGGTGGTGGTTCTATGCTTGGAGGTCTTGGTGCCACTATTGCTCAAGGTATGGCCTTTGGTACCGGAAGTGCAGTGGCTCACAGGGCTGTTGAT
GCCGTAATGGGTCCTCGAACCATCCAGCATGAGACCATTGATTCATCAGCTTCCTCAGCACCTTCTGTAGCAAACAATTCTGGTGGTTCTGATGCTTGTAATGTTCAGTC
AAAATCCTTTCAAGATTGCCTGAACCACTATGGAAGTGACATCAGCAAGTGCCAATTCTACTTGGATATGTTGCAGGAATGCCGCAGGAGCTCAGGTTCTGTTTTGGGTG
CTTAAAATAATTGATTTTTAGAACAATCATTTATTCACACTTTTTCATTTGGATGTAACCGCAAGGAGCGGTGTCAGTTTATTTTGTGTTTTGACAATGTTTCACTTTAC
GGCTACTTCTCTACAACTATAATGGTGTTTAAATAATGAAGCACTTCATCATTTGGACTCAATTGTTATGGCTTTTTCCTTGTGAATTTAAAAATGATGTTTGGATTTTT
AAACATCTACTTGATGAATAATGCAAAAGTAACTGTTTTAGATC
Protein sequenceShow/hide protein sequence
MLGGLGATIAQGMAFGTGSAVAHRAVDAVMGPRTIQHETIDSSASSAPSVANNSGGSDACNVQSKSFQDCLNHYGSDISKCQFYLDMLQECRRSSGSVLGA