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MELO3C011802 (gene) of Melon (DHL92) v4 genome

Gene IDMELO3C011802
OrganismCucumis melo DHL92 (Melon (DHL92) v4)
DescriptionTranscription termination factor MTERF5
Genome locationchr10:4638110..4638664
RNA-Seq ExpressionMELO3C011802
SyntenyMELO3C011802
Gene Ontology termsGO:0006353 - DNA-templated transcription, termination (biological process)
GO:0006355 - regulation of transcription, DNA-templated (biological process)
GO:0003690 - double-stranded DNA binding (molecular function)
InterPro domainsIPR003690 - Transcription termination factor, mitochondrial/chloroplastic
IPR038538 - MTERF superfamily, mitochondrial/chloroplastic


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0034116.1 transcription termination factor MTERF2 [Cucumis melo var. makuwa]1.3e-5979.59Show/hide
Query:  FVHALRVRCSMSESHWKRKINVMKSLGWSEEEILTAFKRYPNYLTCSEEKMRDVADFCFNTAKLDPGTLISYPVLFKLSFDKRVQPRYKVLEVLKVKSLL
        FV+A+ VR SMS+S WK+KINVMKSLGWS++EI TAFKR+PNYL CSEEK+RDVADFCFNTAKLDPGTLISYP LFKLSFDKR++PRYKVLEVLKVK+LL
Subjt:  FVHALRVRCSMSESHWKRKINVMKSLGWSEEEILTAFKRYPNYLTCSEEKMRDVADFCFNTAKLDPGTLISYPVLFKLSFDKRVQPRYKVLEVLKVKSLL

Query:  RNVKIARVLAQGEREFVKTYVVKYLDKIPNLMDIYRGNIAAETKSVL
        +N KIA VL +GER FV+ YVVK+LD+IPNLMDIY GN+ AETKSVL
Subjt:  RNVKIARVLAQGEREFVKTYVVKYLDKIPNLMDIYRGNIAAETKSVL

KAA0034131.1 transcription termination factor MTERF5 [Cucumis melo var. makuwa]5.4e-77100Show/hide
Query:  MFVHALRVRCSMSESHWKRKINVMKSLGWSEEEILTAFKRYPNYLTCSEEKMRDVADFCFNTAKLDPGTLISYPVLFKLSFDKRVQPRYKVLEVLKVKSL
        MFVHALRVRCSMSESHWKRKINVMKSLGWSEEEILTAFKRYPNYLTCSEEKMRDVADFCFNTAKLDPGTLISYPVLFKLSFDKRVQPRYKVLEVLKVKSL
Subjt:  MFVHALRVRCSMSESHWKRKINVMKSLGWSEEEILTAFKRYPNYLTCSEEKMRDVADFCFNTAKLDPGTLISYPVLFKLSFDKRVQPRYKVLEVLKVKSL

Query:  LRNVKIARVLAQGEREFVKTYVVKYLDKIPNLMDIYRGNIAAETKSVL
        LRNVKIARVLAQGEREFVKTYVVKYLDKIPNLMDIYRGNIAAETKSVL
Subjt:  LRNVKIARVLAQGEREFVKTYVVKYLDKIPNLMDIYRGNIAAETKSVL

TYK15788.1 transcription termination factor MTERF5 [Cucumis melo var. makuwa]5.4e-77100Show/hide
Query:  MFVHALRVRCSMSESHWKRKINVMKSLGWSEEEILTAFKRYPNYLTCSEEKMRDVADFCFNTAKLDPGTLISYPVLFKLSFDKRVQPRYKVLEVLKVKSL
        MFVHALRVRCSMSESHWKRKINVMKSLGWSEEEILTAFKRYPNYLTCSEEKMRDVADFCFNTAKLDPGTLISYPVLFKLSFDKRVQPRYKVLEVLKVKSL
Subjt:  MFVHALRVRCSMSESHWKRKINVMKSLGWSEEEILTAFKRYPNYLTCSEEKMRDVADFCFNTAKLDPGTLISYPVLFKLSFDKRVQPRYKVLEVLKVKSL

Query:  LRNVKIARVLAQGEREFVKTYVVKYLDKIPNLMDIYRGNIAAETKSVL
        LRNVKIARVLAQGEREFVKTYVVKYLDKIPNLMDIYRGNIAAETKSVL
Subjt:  LRNVKIARVLAQGEREFVKTYVVKYLDKIPNLMDIYRGNIAAETKSVL

XP_008445933.1 PREDICTED: transcription termination factor MTERF2, chloroplastic-like [Cucumis melo]1.3e-5979.59Show/hide
Query:  FVHALRVRCSMSESHWKRKINVMKSLGWSEEEILTAFKRYPNYLTCSEEKMRDVADFCFNTAKLDPGTLISYPVLFKLSFDKRVQPRYKVLEVLKVKSLL
        FV+A+ VR SMS+S WK+KINVMKSLGWS++EI TAFKR+PNYL CSEEK+RDVADFCFNTAKLDPGTLISYP LFKLSFDKR++PRYKVLEVLKVK+LL
Subjt:  FVHALRVRCSMSESHWKRKINVMKSLGWSEEEILTAFKRYPNYLTCSEEKMRDVADFCFNTAKLDPGTLISYPVLFKLSFDKRVQPRYKVLEVLKVKSLL

Query:  RNVKIARVLAQGEREFVKTYVVKYLDKIPNLMDIYRGNIAAETKSVL
        +N KIA VL +GER FV+ YVVK+LD+IPNLMDIY GN+ AETKSVL
Subjt:  RNVKIARVLAQGEREFVKTYVVKYLDKIPNLMDIYRGNIAAETKSVL

XP_008446995.1 PREDICTED: transcription termination factor MTERF5, chloroplastic-like [Cucumis melo]2.7e-6891.16Show/hide
Query:  MFVHALRVRCSMSESHWKRKINVMKSLGWSEEEILTAFKRYPNYLTCSEEKMRDVADFCFNTAKLDPGTLISYPVLFKLSFDKRVQPRYKVLEVLKVKSL
        MFV+A+ VR SMS+S WK+KINVMKSLGWSE+EI TAFKRYPNYLTC+EEKMRDVADFCFNTAKLDPG LISYP LFKLS DKRVQPRYKVLEVLKVKSL
Subjt:  MFVHALRVRCSMSESHWKRKINVMKSLGWSEEEILTAFKRYPNYLTCSEEKMRDVADFCFNTAKLDPGTLISYPVLFKLSFDKRVQPRYKVLEVLKVKSL

Query:  LRNVKIARVLAQGEREFVKTYVVKYLDKIPNLMDIYRGNIAAETKSV
        LRNVKIARVLAQGEREFVKTYVVKYLDKIPNLMDIYRGNIAAETKSV
Subjt:  LRNVKIARVLAQGEREFVKTYVVKYLDKIPNLMDIYRGNIAAETKSV

TrEMBL top hitse value%identityAlignment
A0A1S3BGD1 transcription termination factor MTERF5, chloroplastic-like1.3e-6891.16Show/hide
Query:  MFVHALRVRCSMSESHWKRKINVMKSLGWSEEEILTAFKRYPNYLTCSEEKMRDVADFCFNTAKLDPGTLISYPVLFKLSFDKRVQPRYKVLEVLKVKSL
        MFV+A+ VR SMS+S WK+KINVMKSLGWSE+EI TAFKRYPNYLTC+EEKMRDVADFCFNTAKLDPG LISYP LFKLS DKRVQPRYKVLEVLKVKSL
Subjt:  MFVHALRVRCSMSESHWKRKINVMKSLGWSEEEILTAFKRYPNYLTCSEEKMRDVADFCFNTAKLDPGTLISYPVLFKLSFDKRVQPRYKVLEVLKVKSL

Query:  LRNVKIARVLAQGEREFVKTYVVKYLDKIPNLMDIYRGNIAAETKSV
        LRNVKIARVLAQGEREFVKTYVVKYLDKIPNLMDIYRGNIAAETKSV
Subjt:  LRNVKIARVLAQGEREFVKTYVVKYLDKIPNLMDIYRGNIAAETKSV

A0A5A7SXE1 Transcription termination factor MTERF52.6e-77100Show/hide
Query:  MFVHALRVRCSMSESHWKRKINVMKSLGWSEEEILTAFKRYPNYLTCSEEKMRDVADFCFNTAKLDPGTLISYPVLFKLSFDKRVQPRYKVLEVLKVKSL
        MFVHALRVRCSMSESHWKRKINVMKSLGWSEEEILTAFKRYPNYLTCSEEKMRDVADFCFNTAKLDPGTLISYPVLFKLSFDKRVQPRYKVLEVLKVKSL
Subjt:  MFVHALRVRCSMSESHWKRKINVMKSLGWSEEEILTAFKRYPNYLTCSEEKMRDVADFCFNTAKLDPGTLISYPVLFKLSFDKRVQPRYKVLEVLKVKSL

Query:  LRNVKIARVLAQGEREFVKTYVVKYLDKIPNLMDIYRGNIAAETKSVL
        LRNVKIARVLAQGEREFVKTYVVKYLDKIPNLMDIYRGNIAAETKSVL
Subjt:  LRNVKIARVLAQGEREFVKTYVVKYLDKIPNLMDIYRGNIAAETKSVL

A0A5D3CX09 Transcription termination factor MTERF52.6e-77100Show/hide
Query:  MFVHALRVRCSMSESHWKRKINVMKSLGWSEEEILTAFKRYPNYLTCSEEKMRDVADFCFNTAKLDPGTLISYPVLFKLSFDKRVQPRYKVLEVLKVKSL
        MFVHALRVRCSMSESHWKRKINVMKSLGWSEEEILTAFKRYPNYLTCSEEKMRDVADFCFNTAKLDPGTLISYPVLFKLSFDKRVQPRYKVLEVLKVKSL
Subjt:  MFVHALRVRCSMSESHWKRKINVMKSLGWSEEEILTAFKRYPNYLTCSEEKMRDVADFCFNTAKLDPGTLISYPVLFKLSFDKRVQPRYKVLEVLKVKSL

Query:  LRNVKIARVLAQGEREFVKTYVVKYLDKIPNLMDIYRGNIAAETKSVL
        LRNVKIARVLAQGEREFVKTYVVKYLDKIPNLMDIYRGNIAAETKSVL
Subjt:  LRNVKIARVLAQGEREFVKTYVVKYLDKIPNLMDIYRGNIAAETKSVL

A0A5D3CXX8 Transcription termination factor MTERF26.5e-6079.59Show/hide
Query:  FVHALRVRCSMSESHWKRKINVMKSLGWSEEEILTAFKRYPNYLTCSEEKMRDVADFCFNTAKLDPGTLISYPVLFKLSFDKRVQPRYKVLEVLKVKSLL
        FV+A+ VR SMS+S WK+KINVMKSLGWS++EI TAFKR+PNYL CSEEK+RDVADFCFNTAKLDPGTLISYP LFKLSFDKR++PRYKVLEVLKVK+LL
Subjt:  FVHALRVRCSMSESHWKRKINVMKSLGWSEEEILTAFKRYPNYLTCSEEKMRDVADFCFNTAKLDPGTLISYPVLFKLSFDKRVQPRYKVLEVLKVKSLL

Query:  RNVKIARVLAQGEREFVKTYVVKYLDKIPNLMDIYRGNIAAETKSVL
        +N KIA VL +GER FV+ YVVK+LD+IPNLMDIY GN+ AETKSVL
Subjt:  RNVKIARVLAQGEREFVKTYVVKYLDKIPNLMDIYRGNIAAETKSVL

A0A5D3CZB3 Transcription termination factor MTERF51.3e-6891.16Show/hide
Query:  MFVHALRVRCSMSESHWKRKINVMKSLGWSEEEILTAFKRYPNYLTCSEEKMRDVADFCFNTAKLDPGTLISYPVLFKLSFDKRVQPRYKVLEVLKVKSL
        MFV+A+ VR SMS+S WK+KINVMKSLGWSE+EI TAFKRYPNYLTC+EEKMRDVADFCFNTAKLDPG LISYP LFKLS DKRVQPRYKVLEVLKVKSL
Subjt:  MFVHALRVRCSMSESHWKRKINVMKSLGWSEEEILTAFKRYPNYLTCSEEKMRDVADFCFNTAKLDPGTLISYPVLFKLSFDKRVQPRYKVLEVLKVKSL

Query:  LRNVKIARVLAQGEREFVKTYVVKYLDKIPNLMDIYRGNIAAETKSV
        LRNVKIARVLAQGEREFVKTYVVKYLDKIPNLMDIYRGNIAAETKSV
Subjt:  LRNVKIARVLAQGEREFVKTYVVKYLDKIPNLMDIYRGNIAAETKSV

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G21150.1 Mitochondrial transcription termination factor family protein2.1e-1832.14Show/hide
Query:  FVHALRVRCSMSESHWKRKINVMKSLGWSEEEILTAFKRYPNYLTCSEEKMRDVADFCFNTAKLDPGTLISYPVLFKLSFDKRVQPRYKVLEVLKVKSLL
        FVHA+      SES  +RK  + +  GWS+E+ + A  R+PN +T S+EK+    ++  N   L    +++ PV+  LS +KR++PR +V+ +L  K L+
Subjt:  FVHALRVRCSMSESHWKRKINVMKSLGWSEEEILTAFKRYPNYLTCSEEKMRDVADFCFNTAKLDPGTLISYPVLFKLSFDKRVQPRYKVLEVLKVKSLL

Query:  R--NVKIARVLAQGEREFVKTYVVKYLDKIPNLMDIYRGN
        +  ++    +L     EF+  +V+KY D++P L+  +  N
Subjt:  R--NVKIARVLAQGEREFVKTYVVKYLDKIPNLMDIYRGN

AT1G61970.1 Mitochondrial transcription termination factor family protein2.1e-1027.68Show/hide
Query:  FVHALRVRCSMSESHWKRKINVMKSLGWSEEEILTAFKRYPNYLTCSEEKMRD-----------------------------------VADFCFNTAKLD
        FV AL+V   M+E   + K+++ KSLG+   ++ ++FK++P  L  SE+KM D                                     +F        
Subjt:  FVHALRVRCSMSESHWKRKINVMKSLGWSEEEILTAFKRYPNYLTCSEEKMRD-----------------------------------VADFCFNTAKLD

Query:  PGTLISYPVLFKLSFDKRVQPRYKVLEVLKVKSLLRN--VKIARVLAQGEREFVKTYVVKYLDK--IPNLMDIYRGN
           ++S P +F  S +KR+ PR  V++ L  K L+RN    I+ VL   ++ F+  YV  ++DK  +  LM IYR +
Subjt:  PGTLISYPVLFKLSFDKRVQPRYKVLEVLKVKSLLRN--VKIARVLAQGEREFVKTYVVKYLDK--IPNLMDIYRGN

AT1G61990.1 Mitochondrial transcription termination factor family protein7.2e-1132.5Show/hide
Query:  LGWSEEEILTAFKRYPNYLTCSEEKMRDVADFCFNTAKLDPGTLISYPVLFKLSFDKRVQPRYKVLEVLKVKSLLRN----VKIARVLAQGEREFVKTYV
        LG+S  E L   KRYP  +  S E ++   +F     K     L+ +P +F  S +KR+ PR  +LE L  K LLR       ++ VL+  +  F+  YV
Subjt:  LGWSEEEILTAFKRYPNYLTCSEEKMRDVADFCFNTAKLDPGTLISYPVLFKLSFDKRVQPRYKVLEVLKVKSLLRN----VKIARVLAQGEREFVKTYV

Query:  VKYLDKIPNLMDIY-RGNIA
        +K+ + +P LM I+ +G+++
Subjt:  VKYLDKIPNLMDIY-RGNIA

AT5G07900.1 Mitochondrial transcription termination factor family protein1.3e-1530.66Show/hide
Query:  VHALRVRCSMSESHWKRKINVMKSLGWSEEEILTAFKRYPNYLTCSEEKMRDVADFCFNTAKLDPGTLISYPVLFKLSFDKRVQPRYKVLEVLKVKSLLR
        +HAL  +   ++S W +   V +  GWSE++I+ AFK++P+ +  SE K+    ++  N   + P ++   PV+   S +KR+ PR  V +VL    L++
Subjt:  VHALRVRCSMSESHWKRKINVMKSLGWSEEEILTAFKRYPNYLTCSEEKMRDVADFCFNTAKLDPGTLISYPVLFKLSFDKRVQPRYKVLEVLKVKSLLR

Query:  -NVKIARVLAQGEREFVKTYVVKYLDKIPNLMDIYRG
         +  +  +L   E+ F++  V+KY +++P LM++Y G
Subjt:  -NVKIARVLAQGEREFVKTYVVKYLDKIPNLMDIYRG

AT5G64950.1 Mitochondrial transcription termination factor family protein6.9e-1432.09Show/hide
Query:  MFVHALRVRCSMSESHWKRKINVMKSLGWSEEEILTAFKRYPNYLTCSEEKMRDVADFCFNTAKLDPGTLISYPVLFKLSFDKRVQPRYKVLEVLKVKSL
        M VHA+    S+SE  + RK+ +  + G+SE+EI    +R P  + CSE+K+    +F      L+   L   P +   + +KRV PR KVL++L+ K L
Subjt:  MFVHALRVRCSMSESHWKRKINVMKSLGWSEEEILTAFKRYPNYLTCSEEKMRDVADFCFNTAKLDPGTLISYPVLFKLSFDKRVQPRYKVLEVLKVKSL

Query:  L-----RNVKIARVLAQGEREFVKTYVVKYLDKI
        L     +   +  ++   E  F++ YVV++ D+I
Subjt:  L-----RNVKIARVLAQGEREFVKTYVVKYLDKI


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTTTGTTCATGCACTTAGGGTAAGGTGTTCAATGAGTGAGTCACATTGGAAGAGAAAAATAAATGTTATGAAGAGTTTAGGATGGTCTGAGGAGGAGATTCTT
ACAGCATTTAAGAGATATCCAAATTATTTAACTTGTTCAGAGGAGAAAATGAGGGATGTTGCAGATTTCTGTTTCAACACTGCAAAGTTGGATCCAGGAACTCTA
ATTTCTTACCCTGTGTTATTCAAGTTGTCATTCGACAAGCGGGTCCAACCGAGATACAAAGTTCTTGAGGTCTTGAAGGTGAAAAGTCTTCTTAGGAACGTAAAG
ATCGCTCGGGTGCTTGCACAAGGGGAGAGAGAATTTGTGAAGACATATGTTGTTAAGTATTTGGATAAAATCCCAAATCTGATGGACATATACCGGGGCAATATC
GCAGCCGAAACCAAATCTGTTCTGTAG
mRNA sequenceShow/hide mRNA sequence
CATTGAACCAAAGGCTGGTATGTTTGTTCATGCACTTAGGGTAAGGTGTTCAATGAGTGAGTCACATTGGAAGAGAAAAATAAATGTTATGAAGAGTTTAGGATG
GTCTGAGGAGGAGATTCTTACAGCATTTAAGAGATATCCAAATTATTTAACTTGTTCAGAGGAGAAAATGAGGGATGTTGCAGATTTCTGTTTCAACACTGCAAA
GTTGGATCCAGGAACTCTAATTTCTTACCCTGTGTTATTCAAGTTGTCATTCGACAAGCGGGTCCAACCGAGATACAAAGTTCTTGAGGTCTTGAAGGTGAAAAG
TCTTCTTAGGAACGTAAAGATCGCTCGGGTGCTTGCACAAGGGGAGAGAGAATTTGTGAAGACATATGTTGTTAAGTATTTGGATAAAATCCCAAATCTGATGGA
CATATACCGGGGCAATATCGCAGCCGAAACCAAATCTGTTCTGTAGGATTGGGAAGTTGTAAGTTAAACTGTTCTTAAAGTTTAAATTTGAGCATCATGATCTTC
AAAGGGGAGAGCATTTATGTGGTTATTGAG
Protein sequenceShow/hide protein sequence
MFVHALRVRCSMSESHWKRKINVMKSLGWSEEEILTAFKRYPNYLTCSEEKMRDVADFCFNTAKLDPGTLISYPVLFKLSFDKRVQPRYKVLEVLKVKSLLRNVK
IARVLAQGEREFVKTYVVKYLDKIPNLMDIYRGNIAAETKSVL