CuGenDBv2

Gene ID	MELO3C012013
Organism	Cucumis melo DHL92 (Melon (DHL92) v4)
Description	transcription factor PAR1-like
Genome location	chr10:3250018..3250606
RNA-Seq Expression	MELO3C012013
Synteny	MELO3C012013
Gene Ontology terms	GO:0006355 - regulation of transcription, DNA-templated (biological process)
InterPro domains	IPR044549 - Transcription factor IBH1-like, bHLH domain IPR044660 - Transcription factor IBH1-like

Homology

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GenBank top hits

e value

%identity

Alignment

KAG6601364.1 hypothetical protein SDJN03_06597, partial [Cucurbita argyrosperma subsp. sororia]

1.0e-30

85.06

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Query:  YYSICESNGIGKVRWQRRGRRGGRHGGGGGGGGSVHMKMRKLQRLIPGGRRLKPDRLFLKTADYIMQLRSQVHVLQALSKIYDPTLS
        YY+  E+ GI KV+WQRRGRRGGRH GGG G  SVHMK+RKLQRLIPGGRRLKPDRLFLKTADYIMQLRSQVHVLQALSKIYDP LS
Subjt:  YYSICESNGIGKVRWQRRGRRGGRHGGGGGGGGSVHMKMRKLQRLIPGGRRLKPDRLFLKTADYIMQLRSQVHVLQALSKIYDPTLS

KAG7032147.1 hypothetical protein SDJN02_06190, partial [Cucurbita argyrosperma subsp. argyrosperma]

1.6e-31

86.21

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Query:  YYSICESNGIGKVRWQRRGRRGGRHGGGGGGGGSVHMKMRKLQRLIPGGRRLKPDRLFLKTADYIMQLRSQVHVLQALSKIYDPTLS
        YY+  E+ GI KV+WQRRGRRGGRH GGGGG  SVHMK+RKLQRLIPGGRRLKPDRLFLKTADYIMQLRSQVHVLQALSKIYDP LS
Subjt:  YYSICESNGIGKVRWQRRGRRGGRHGGGGGGGGSVHMKMRKLQRLIPGGRRLKPDRLFLKTADYIMQLRSQVHVLQALSKIYDPTLS

XP_008446236.1 PREDICTED: uncharacterized protein LOC103489026 [Cucumis melo]

1.2e-42

100

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Query:  MERYYSICESNGIGKVRWQRRGRRGGRHGGGGGGGGSVHMKMRKLQRLIPGGRRLKPDRLFLKTADYIMQLRSQVHVLQALSKIYDPTLSN
        MERYYSICESNGIGKVRWQRRGRRGGRHGGGGGGGGSVHMKMRKLQRLIPGGRRLKPDRLFLKTADYIMQLRSQVHVLQALSKIYDPTLSN
Subjt:  MERYYSICESNGIGKVRWQRRGRRGGRHGGGGGGGGSVHMKMRKLQRLIPGGRRLKPDRLFLKTADYIMQLRSQVHVLQALSKIYDPTLSN

XP_011655641.1 uncharacterized protein LOC105435564 [Cucumis sativus]

1.2e-37

92.31

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Query:  MERYYSICESNGIGKVRWQRRGRRGGRHGGGGGGGGSVHMKMRKLQRLIPGGRRLKPDRLFLKTADYIMQLRSQVHVLQALSKIYDPTLSN
        M++YY  CES GIGKVRWQRRGRRGGRH  GGGGGGSVHMKMRKLQRLIPGGRRLKPDRLFLKTADYIMQLRSQVHVLQALSKIYDPTLSN
Subjt:  MERYYSICESNGIGKVRWQRRGRRGGRHGGGGGGGGSVHMKMRKLQRLIPGGRRLKPDRLFLKTADYIMQLRSQVHVLQALSKIYDPTLSN

XP_023513052.1 transcription factor PAR2-like [Cucurbita pepo subsp. pepo]

1.2e-31

86.21

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Query:  YYSICESNGIGKVRWQRRGRRGGRHGGGGGGGGSVHMKMRKLQRLIPGGRRLKPDRLFLKTADYIMQLRSQVHVLQALSKIYDPTLS
        YY+  E+ GI KV+WQRRGRRGGRH  GGGGG SVHMK+RKLQRLIPGGRRLKPDRLFLKTADYIMQLRSQVHVLQALSKIYDP LS
Subjt:  YYSICESNGIGKVRWQRRGRRGGRHGGGGGGGGSVHMKMRKLQRLIPGGRRLKPDRLFLKTADYIMQLRSQVHVLQALSKIYDPTLS

TrEMBL top hits

e value

%identity

Alignment

A0A0A0KQB4 Uncharacterized protein

5.6e-38

92.31

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Query:  MERYYSICESNGIGKVRWQRRGRRGGRHGGGGGGGGSVHMKMRKLQRLIPGGRRLKPDRLFLKTADYIMQLRSQVHVLQALSKIYDPTLSN
        M++YY  CES GIGKVRWQRRGRRGGRH  GGGGGGSVHMKMRKLQRLIPGGRRLKPDRLFLKTADYIMQLRSQVHVLQALSKIYDPTLSN
Subjt:  MERYYSICESNGIGKVRWQRRGRRGGRHGGGGGGGGSVHMKMRKLQRLIPGGRRLKPDRLFLKTADYIMQLRSQVHVLQALSKIYDPTLSN

A0A1S3BFE3 uncharacterized protein LOC103489026

5.8e-43

100

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Query:  MERYYSICESNGIGKVRWQRRGRRGGRHGGGGGGGGSVHMKMRKLQRLIPGGRRLKPDRLFLKTADYIMQLRSQVHVLQALSKIYDPTLSN
        MERYYSICESNGIGKVRWQRRGRRGGRHGGGGGGGGSVHMKMRKLQRLIPGGRRLKPDRLFLKTADYIMQLRSQVHVLQALSKIYDPTLSN
Subjt:  MERYYSICESNGIGKVRWQRRGRRGGRHGGGGGGGGSVHMKMRKLQRLIPGGRRLKPDRLFLKTADYIMQLRSQVHVLQALSKIYDPTLSN

A0A6J1DDZ5 transcription factor PAR2

2.6e-27

77.78

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Query:  YYSICESN----GIGKVRWQRRGRRGGRHGGGGGGGGSVHMKMRKLQRLIPGGRRLKPDRLFLKTADYIMQLRSQVHVLQALSKIYDPTL
        YY +  ++    GIGKV+WQRRGRRGGRH     GGGSV MKMRKLQRLIPGGR LKPDRLFLKTADYIMQLRSQV+VLQALSKIY+PTL
Subjt:  YYSICESN----GIGKVRWQRRGRRGGRHGGGGGGGGSVHMKMRKLQRLIPGGRRLKPDRLFLKTADYIMQLRSQVHVLQALSKIYDPTL

A0A6J1GYH6 transcription factor PAR2-like

2.8e-29

80.46

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Query:  YYSICESNGIGKVRWQRRGRRGGRHGGGGGGGGSVHMKMRKLQRLIPGGRRLKPDRLFLKTADYIMQLRSQVHVLQALSKIYDPTLS
        YY+  E+ GI KV+WQRRGRRGGRH     GG SVHMK+RKLQR+IPGGRRLKPDRLFLKTADYIMQLRSQVHVL ALSKIYDP LS
Subjt:  YYSICESNGIGKVRWQRRGRRGGRHGGGGGGGGSVHMKMRKLQRLIPGGRRLKPDRLFLKTADYIMQLRSQVHVLQALSKIYDPTLS

A0A6J1IR24 uncharacterized protein LOC111477674

1.2e-29

82.76

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Query:  YYSICESNGIGKVRWQRRGRRGGRHGGGGGGGGSVHMKMRKLQRLIPGGRRLKPDRLFLKTADYIMQLRSQVHVLQALSKIYDPTLS
        YY+  E+ GI KV+WQRRGRRGG H    GG  SVHMKMRKLQRLIPGGRRLKPDRLFLKTADYIMQLRSQVHVLQALSKIYDP LS
Subjt:  YYSICESNGIGKVRWQRRGRRGGRHGGGGGGGGSVHMKMRKLQRLIPGGRRLKPDRLFLKTADYIMQLRSQVHVLQALSKIYDPTLS

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits

e value

%identity

Alignment

AT1G23965.1 unknown protein

2.2e-10

59.65

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Query:  GGGGGGGSVHMKMRKLQRLIPGGRRL-KPDRLFLKTADYIMQLRSQVHVLQALSKIY
        G G G GS+ +KMRKL+ LIPGGRRL +PD L  KTADYIM L  ++  L+A+S IY
Subjt:  GGGGGGGSVHMKMRKLQRLIPGGRRL-KPDRLFLKTADYIMQLRSQVHVLQALSKIY

AT1G70270.1 unknown protein

7.3e-06

45.61

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Query:  GGGGGGGSVHMKMRKLQRLIPGGRRLK-PDRLFLKTADYIMQLRSQVHVLQALSKIY
        G G   G + MK+R+LQ LIPGG+    PD L  KT DYI+ L+ ++  L+A+S++Y
Subjt:  GGGGGGGSVHMKMRKLQRLIPGGRRLK-PDRLFLKTADYIMQLRSQVHVLQALSKIY

AT2G42870.1 phy rapidly regulated 1

4.0e-04

44.44

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Query:  VHMKMRKLQRLIPGGRRLKPDRLFLKTADYIMQLRSQVHVLQALS
        V  K+  LQR+IPGG  L  D LF +TA YI+ L+ Q+  ++ L+
Subjt:  VHMKMRKLQRLIPGGRRLKPDRLFLKTADYIMQLRSQVHVLQALS

Sequences

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CDS sequence

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mRNA sequence

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ATGGAACGATATTATAGTATTTGTGAGAGCAACGGAATTGGAAAGGTGAGGTGGCAGAGGAGAGGGAGGCGCGGGGGACGGCACGGCGGCGGCGGGGGTGGTGGTGGTTC
CGTCCATATGAAGATGAGAAAGCTGCAGCGGCTGATCCCCGGAGGACGGAGGCTGAAACCGGACCGGTTGTTCTTGAAAACGGCGGATTATATAATGCAATTGAGGTCTC
AAGTTCATGTTTTACAAGCACTTTCCAAGATTTATGACCCTACACTTTCTAATTAGTGATATAAATCTCTATTATTATTATTTTTTTTCCTTTTTCTTTTAATTTTTTTT
TCCTTCTTTTTATAATTTTTTATGTTTTTTTTTAAGTCTTGTATCCAGAAAAAAAGAAGAAGAGAAAAATTAATTGGCTTTTTTGGCCACCTCTATATGACATACATACA
CATTATTATTAAATATCTATATGTTTTGTGTGTGTGTGGGATGATGTATGTATTGTTTGTTTATGTGTAGATATCACATGATTAAATGATATCTACCTACCAATTTCTTC
CTCATTTAGCTAACTAAGATTAATTCAAGGTTCTCTCTT

Protein sequence

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MERYYSICESNGIGKVRWQRRGRRGGRHGGGGGGGGSVHMKMRKLQRLIPGGRRLKPDRLFLKTADYIMQLRSQVHVLQALSKIYDPTLSN

MELO3C012013 (gene) of Melon (DHL92) v4 genome