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MELO3C012113 (gene) of Melon (DHL92) v4 genome

Gene IDMELO3C012113
OrganismCucumis melo DHL92 (Melon (DHL92) v4)
DescriptionCASP-like protein
Genome locationchr10:2551492..2552469
RNA-Seq ExpressionMELO3C012113
SyntenyMELO3C012113
Gene Ontology termsGO:0005886 - plasma membrane (cellular component)
GO:0016021 - integral component of membrane (cellular component)
InterPro domainsIPR006459 - Casparian strip membrane protein
IPR006702 - Casparian strip membrane protein domain


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_008446384.1 PREDICTED: casparian strip membrane protein 1 [Cucumis melo]5.6e-5599.17Show/hide
Query:  MGKTKTESGEIQNLGSKFKNPIGEGAQRGLAIVDLVVRVMATMATLSSAIVMGTANQTLPFSTQSSQFKANYKDLPMFMFFVVANAIVCGYLFLSLPLSI
        MGKTKTESGEIQNLGSKFKNPIGEGAQRGLAIVDLVVRVMATMATLSSAIVMGTANQTLPFSTQSSQFKANYKDLPMFMFFVVANAIVCGYLFLSLPLSI
Subjt:  MGKTKTESGEIQNLGSKFKNPIGEGAQRGLAIVDLVVRVMATMATLSSAIVMGTANQTLPFSTQSSQFKANYKDLPMFMFFVVANAIVCGYLFLSLPLSI

Query:  FHVMEVASVTPRLILLIFDTV
        FHVMEVASVTPRLILLIFDT+
Subjt:  FHVMEVASVTPRLILLIFDTV

XP_022151205.1 casparian strip membrane protein 1 [Momordica charantia]9.9e-3671.9Show/hide
Query:  MGKTKTESGEIQNLGSKFKNPIGEGAQRGLAIVDLVVRVMATMATLSSAIVMGTANQTLPFSTQSSQFKANYKDLPMFMFFVVANAIVCGYLFLSLPLSI
        M +       ++  G K  NPIGEGAQR L+IVDLV+RVMA MATLSSA+VM TANQTLPFSTQSSQFKA+YKDLP F FFV+AN+IVCGYLFL LPLSI
Subjt:  MGKTKTESGEIQNLGSKFKNPIGEGAQRGLAIVDLVVRVMATMATLSSAIVMGTANQTLPFSTQSSQFKANYKDLPMFMFFVVANAIVCGYLFLSLPLSI

Query:  FHVMEVASVTPRLILLIFDTV
        F ++EVA+VTPRLILL FDT+
Subjt:  FHVMEVASVTPRLILLIFDTV

XP_031742030.1 casparian strip membrane protein 1-like isoform X1 [Cucumis sativus]3.8e-5194.12Show/hide
Query:  MGKTKTESGEIQNLGSKFKNPIGEGAQRGLAIVDLVVRVMATMATLSSAIVMGTANQTLPFSTQSSQFKANYKDLPMFMFFVVANAIVCGYLFLSLPLSI
        MGKTKTESGE Q LGSKF+NPIGEGAQRGLAIVDLVVRVMATMATLSSAIVMGTANQTLPFSTQ+SQFKANYKDLPMFMFFV+AN+IVCGYLFLSLPLSI
Subjt:  MGKTKTESGEIQNLGSKFKNPIGEGAQRGLAIVDLVVRVMATMATLSSAIVMGTANQTLPFSTQSSQFKANYKDLPMFMFFVVANAIVCGYLFLSLPLSI

Query:  FHVMEVASVTPRLILLIFD
        FH+MEVASVTPRLILLIFD
Subjt:  FHVMEVASVTPRLILLIFD

XP_031742031.1 casparian strip membrane protein 4-like isoform X2 [Cucumis sativus]3.8e-5194.12Show/hide
Query:  MGKTKTESGEIQNLGSKFKNPIGEGAQRGLAIVDLVVRVMATMATLSSAIVMGTANQTLPFSTQSSQFKANYKDLPMFMFFVVANAIVCGYLFLSLPLSI
        MGKTKTESGE Q LGSKF+NPIGEGAQRGLAIVDLVVRVMATMATLSSAIVMGTANQTLPFSTQ+SQFKANYKDLPMFMFFV+AN+IVCGYLFLSLPLSI
Subjt:  MGKTKTESGEIQNLGSKFKNPIGEGAQRGLAIVDLVVRVMATMATLSSAIVMGTANQTLPFSTQSSQFKANYKDLPMFMFFVVANAIVCGYLFLSLPLSI

Query:  FHVMEVASVTPRLILLIFD
        FH+MEVASVTPRLILLIFD
Subjt:  FHVMEVASVTPRLILLIFD

XP_038891857.1 casparian strip membrane protein 1-like [Benincasa hispida]4.8e-4686.55Show/hide
Query:  MGKTKTESGEIQNLGSKFKNPIGEGAQRGLAIVDLVVRVMATMATLSSAIVMGTANQTLPFSTQSSQFKANYKDLPMFMFFVVANAIVCGYLFLSLPLSI
        M K K+ESG+   LGSKF NPIGEGAQRGLAIVDLV+RVMA MATLSSA+VMGTANQTLPFSTQSSQFKANYKDLPMFMFFV+AN++VCGYLFLSLPLSI
Subjt:  MGKTKTESGEIQNLGSKFKNPIGEGAQRGLAIVDLVVRVMATMATLSSAIVMGTANQTLPFSTQSSQFKANYKDLPMFMFFVVANAIVCGYLFLSLPLSI

Query:  FHVMEVASVTPRLILLIFD
        F +MEVASVTPRLILLIFD
Subjt:  FHVMEVASVTPRLILLIFD

TrEMBL top hitse value%identityAlignment
A0A0A0KQP6 CASP-like protein8.5e-4992.44Show/hide
Query:  MGKTKTESGEIQNLGSKFKNPIGEGAQRGLAIVDLVVRVMATMATLSSAIVMGTANQTLPFSTQSSQFKANYKDLPMFMFFVVANAIVCGYLFLSLPLSI
        MGKTKTESGE Q LGSKF+NPIGEGAQRGLAIVDLVVRVMATMATLSSAIVMGTANQTLPFSTQ+SQFKANYKDLP  MFFV+AN+IVCGYLFLSLPLSI
Subjt:  MGKTKTESGEIQNLGSKFKNPIGEGAQRGLAIVDLVVRVMATMATLSSAIVMGTANQTLPFSTQSSQFKANYKDLPMFMFFVVANAIVCGYLFLSLPLSI

Query:  FHVMEVASVTPRLILLIFD
        FH+MEVASVTPRLILLIFD
Subjt:  FHVMEVASVTPRLILLIFD

A0A1S3BFR8 CASP-like protein2.7e-5599.17Show/hide
Query:  MGKTKTESGEIQNLGSKFKNPIGEGAQRGLAIVDLVVRVMATMATLSSAIVMGTANQTLPFSTQSSQFKANYKDLPMFMFFVVANAIVCGYLFLSLPLSI
        MGKTKTESGEIQNLGSKFKNPIGEGAQRGLAIVDLVVRVMATMATLSSAIVMGTANQTLPFSTQSSQFKANYKDLPMFMFFVVANAIVCGYLFLSLPLSI
Subjt:  MGKTKTESGEIQNLGSKFKNPIGEGAQRGLAIVDLVVRVMATMATLSSAIVMGTANQTLPFSTQSSQFKANYKDLPMFMFFVVANAIVCGYLFLSLPLSI

Query:  FHVMEVASVTPRLILLIFDTV
        FHVMEVASVTPRLILLIFDT+
Subjt:  FHVMEVASVTPRLILLIFDTV

A0A5A7SX44 CASP-like protein2.7e-5599.17Show/hide
Query:  MGKTKTESGEIQNLGSKFKNPIGEGAQRGLAIVDLVVRVMATMATLSSAIVMGTANQTLPFSTQSSQFKANYKDLPMFMFFVVANAIVCGYLFLSLPLSI
        MGKTKTESGEIQNLGSKFKNPIGEGAQRGLAIVDLVVRVMATMATLSSAIVMGTANQTLPFSTQSSQFKANYKDLPMFMFFVVANAIVCGYLFLSLPLSI
Subjt:  MGKTKTESGEIQNLGSKFKNPIGEGAQRGLAIVDLVVRVMATMATLSSAIVMGTANQTLPFSTQSSQFKANYKDLPMFMFFVVANAIVCGYLFLSLPLSI

Query:  FHVMEVASVTPRLILLIFDTV
        FHVMEVASVTPRLILLIFDT+
Subjt:  FHVMEVASVTPRLILLIFDTV

A0A6J1DAJ8 CASP-like protein4.8e-3671.9Show/hide
Query:  MGKTKTESGEIQNLGSKFKNPIGEGAQRGLAIVDLVVRVMATMATLSSAIVMGTANQTLPFSTQSSQFKANYKDLPMFMFFVVANAIVCGYLFLSLPLSI
        M +       ++  G K  NPIGEGAQR L+IVDLV+RVMA MATLSSA+VM TANQTLPFSTQSSQFKA+YKDLP F FFV+AN+IVCGYLFL LPLSI
Subjt:  MGKTKTESGEIQNLGSKFKNPIGEGAQRGLAIVDLVVRVMATMATLSSAIVMGTANQTLPFSTQSSQFKANYKDLPMFMFFVVANAIVCGYLFLSLPLSI

Query:  FHVMEVASVTPRLILLIFDTV
        F ++EVA+VTPRLILL FDT+
Subjt:  FHVMEVASVTPRLILLIFDTV

A0A6J1HW80 CASP-like protein1.5e-3471.31Show/hide
Query:  MGKTKTESGEIQNLGSKFKNPI-GEGAQRGLAIVDLVVRVMATMATLSSAIVMGTANQTLPFSTQSSQFKANYKDLPMFMFFVVANAIVCGYLFLSLPLS
        M ++K +S     LGSK + P  G GAQRGL IVDLV+RV+A MATL SAIVMGTA+QTLPFSTQS+QFKA YKDLPMFMFFV+ N++ CGYLFLSLPLS
Subjt:  MGKTKTESGEIQNLGSKFKNPI-GEGAQRGLAIVDLVVRVMATMATLSSAIVMGTANQTLPFSTQSSQFKANYKDLPMFMFFVVANAIVCGYLFLSLPLS

Query:  IFHVMEVASVTPRLILLIFDTV
        IF +++VASVTPRL LLIFDT+
Subjt:  IFHVMEVASVTPRLILLIFDTV

SwissProt top hitse value%identityAlignment
B9T4E6 Casparian strip membrane protein 55.9e-2355.24Show/hide
Query:  SKFKNPIGEGAQRGLAIVDLVVRVMATMATLSSAIVMGTANQTLPFSTQSSQFKANYKDLPMFMFFVVANAIVCGYLFLSLPLSIFHVMEVASVTPRLIL
        +K   PIG GA RG++I+D ++R++A + TL+SAI+MGT N+TLPF+TQ  +F+A Y DLP F FFVVAN +V GYL LSLPLSI +++   +   R+IL
Subjt:  SKFKNPIGEGAQRGLAIVDLVVRVMATMATLSSAIVMGTANQTLPFSTQSSQFKANYKDLPMFMFFVVANAIVCGYLFLSLPLSIFHVMEVASVTPRLIL

Query:  LIFDT
        +IFDT
Subjt:  LIFDT

G7JG80 Casparian strip membrane protein 22.0e-2352.17Show/hide
Query:  ESGEIQNLGSKFKNPIGEGAQRGLAIVDLVVRVMATMATLSSAIVMGTANQTLPFSTQSSQFKANYKDLPMFMFFVVANAIVCGYLFLSLPLSIFHVMEV
        ESGEI    SK  +   +G +RGL+I+D ++R+ A M+TL SA+ MGTA QT+PF+T+  +FK ++ DLP F+FFV AN+IVCGYL LSL LS FH++  
Subjt:  ESGEIQNLGSKFKNPIGEGAQRGLAIVDLVVRVMATMATLSSAIVMGTANQTLPFSTQSSQFKANYKDLPMFMFFVVANAIVCGYLFLSLPLSIFHVMEV

Query:  ASVTPRLILLIFDTV
         SV  R++L+  DTV
Subjt:  ASVTPRLILLIFDTV

P0DI33 Casparian strip membrane protein 15.9e-2352.17Show/hide
Query:  ESGEIQNLGSKFKNPIGEGAQRGLAIVDLVVRVMATMATLSSAIVMGTANQTLPFSTQSSQFKANYKDLPMFMFFVVANAIVCGYLFLSLPLSIFHVMEV
        ESGE    G   K P+  G  +GL+++DL++R +A + TL+SAI MGT N+TLPF TQ  +FKA Y DLP   FFVVAN+IVC YL LSLPLSI H++  
Subjt:  ESGEIQNLGSKFKNPIGEGAQRGLAIVDLVVRVMATMATLSSAIVMGTANQTLPFSTQSSQFKANYKDLPMFMFFVVANAIVCGYLFLSLPLSIFHVMEV

Query:  ASVTPRLILLIFDTV
         +   RL+L+  D V
Subjt:  ASVTPRLILLIFDTV

P0DI36 Casparian strip membrane protein 31.3e-2254.29Show/hide
Query:  GSKFKNPIGEGAQRGLAIVDLVVRVMATMATLSSAIVMGTANQTLPFSTQSSQFKANYKDLPMFMFFVVANAIVCGYLFLSLPLSIFHVMEVASVTPRLI
        G   K P+ +G  RGL I+DL+ RV+A + TL+SAI MGT NQT+PF TQ  QFK  Y DLP   FFVVAN+I   YL +SLPLSI H++   +   RLI
Subjt:  GSKFKNPIGEGAQRGLAIVDLVVRVMATMATLSSAIVMGTANQTLPFSTQSSQFKANYKDLPMFMFFVVANAIVCGYLFLSLPLSIFHVMEVASVTPRLI

Query:  LLIFD
        L+ FD
Subjt:  LLIFD

P0DI42 Casparian strip membrane protein 21.3e-2253.1Show/hide
Query:  ESGEIQNLGSKFKNPIGEGAQRGLAIVDLVVRVMATMATLSSAIVMGTANQTLPFSTQSSQFKANYKDLPMFMFFVVANAIVCGYLFLSLPLSIFHVMEV
        +SGE    G   K P+ +G  RG++I+DL++RV+A ++TL+SAI MGT N+TLP  T   QFKA Y DLP   FFVVAN+IV  YL LSLPLSI H++  
Subjt:  ESGEIQNLGSKFKNPIGEGAQRGLAIVDLVVRVMATMATLSSAIVMGTANQTLPFSTQSSQFKANYKDLPMFMFFVVANAIVCGYLFLSLPLSIFHVMEV

Query:  ASVTPRLILLIFD
         +   RL+L+IFD
Subjt:  ASVTPRLILLIFD

Arabidopsis top hitse value%identityAlignment
AT2G27370.1 Uncharacterised protein family (UPF0497)8.4e-1748.45Show/hide
Query:  GAQRGLAIVDLVVRVMATMATLSSAIVMGTANQTLPFSTQSSQFKANYKDLPMFMFFVVANAIVCGYLFLSLPLSIFHVMEVASVTPRLILLIFDTV
        G +RG+AI D V+R++A +  +++A  M T  +TLPF TQ  QF+A+Y DLP    FV+ N+IV GYL LSLP SI  ++   +V PRL L++ DTV
Subjt:  GAQRGLAIVDLVVRVMATMATLSSAIVMGTANQTLPFSTQSSQFKANYKDLPMFMFFVVANAIVCGYLFLSLPLSIFHVMEVASVTPRLILLIFDTV

AT2G36100.1 Uncharacterised protein family (UPF0497)1.4e-1954.64Show/hide
Query:  GAQRGLAIVDLVVRVMATMATLSSAIVMGTANQTLPFSTQSSQFKANYKDLPMFMFFVVANAIVCGYLFLSLPLSIFHVMEVASVTPRLILLIFDTV
        GA+RGLAI D ++R+ A   T+ +A VM TA +TLPF TQ  QF+A Y DLP F +FV+A A+V  YL LSLP SI  ++   +V PRLILLI DT+
Subjt:  GAQRGLAIVDLVVRVMATMATLSSAIVMGTANQTLPFSTQSSQFKANYKDLPMFMFFVVANAIVCGYLFLSLPLSIFHVMEVASVTPRLILLIFDTV

AT3G11550.1 Uncharacterised protein family (UPF0497)3.7e-2052.08Show/hide
Query:  GAQRGLAIVDLVVRVMATMATLSSAIVMGTANQTLPFSTQSSQFKANYKDLPMFMFFVVANAIVCGYLFLSLPLSIFHVMEVASVTPRLILLIFDT
        G  RGLAI D ++R+ A +A L++A  MGT+++TLPF TQ  QF+A+Y DLP F FFV+A A+V GYL LSLP+S+  ++   +  PRL+LL+ DT
Subjt:  GAQRGLAIVDLVVRVMATMATLSSAIVMGTANQTLPFSTQSSQFKANYKDLPMFMFFVVANAIVCGYLFLSLPLSIFHVMEVASVTPRLILLIFDT

AT5G06200.1 Uncharacterised protein family (UPF0497)1.3e-2054.17Show/hide
Query:  GAQRGLAIVDLVVRVMATMATLSSAIVMGTANQTLPFSTQSSQFKANYKDLPMFMFFVVANAIVCGYLFLSLPLSIFHVMEVASVTPRLILLIFDT
        G +RGL+I D ++R+ A +A L++A  MGT+++TLPF TQ  QF+A+Y DLP F FFVVA AIV GYL LSLP S+  ++   +V PRL+LL+ DT
Subjt:  GAQRGLAIVDLVVRVMATMATLSSAIVMGTANQTLPFSTQSSQFKANYKDLPMFMFFVVANAIVCGYLFLSLPLSIFHVMEVASVTPRLILLIFDT

AT5G15290.1 Uncharacterised protein family (UPF0497)4.9e-1747.83Show/hide
Query:  RGLAIVDLVVRVMATMATLSSAIVMGTANQTLPFSTQSSQFKANYKDLPMFMFFVVANAIVCGYLFLSLPLSIFHVMEVASVTPRLILLIFD
        R +AI++ ++R++A   T+ SAI+MGT ++TLPF TQ  +F+A Y DLP   FFVVANA+V GYL LSL L+  H+++  +   R++L+I D
Subjt:  RGLAIVDLVVRVMATMATLSSAIVMGTANQTLPFSTQSSQFKANYKDLPMFMFFVVANAIVCGYLFLSLPLSIFHVMEVASVTPRLILLIFD


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGAAAGACAAAGACAGAGAGTGGAGAAATTCAAAATTTGGGTTCAAAGTTCAAGAACCCAATTGGAGAAGGAGCTCAGAGAGGGCTAGCCATAGTGGACTTG
GTGGTGAGAGTAATGGCAACAATGGCTACTTTAAGTAGTGCAATAGTAATGGGCACAGCTAATCAAACTTTGCCATTTTCAACACAATCTTCTCAGTTCAAAGCC
AACTATAAAGATCTTCCTATGTTTATGTTCTTTGTGGTTGCAAATGCCATAGTTTGTGGGTATCTGTTTCTATCCCTTCCTCTGTCCATTTTCCATGTCATGGAA
GTTGCATCAGTCACTCCAAGGCTCATTTTGCTCATCTTTGACACGGTACCTTCGTTCTCTTTCCCTTTTCTTTTAATAACTTTCACCACTCTAAATTTTAAGTGT
TATTTTTTTTAA
mRNA sequenceShow/hide mRNA sequence
GAACTTAAACAGAGAGAAGTTGAGAATTTGATCAAATTAAATGGGAAAGACAAAGACAGAGAGTGGAGAAATTCAAAATTTGGGTTCAAAGTTCAAGAACCCAAT
TGGAGAAGGAGCTCAGAGAGGGCTAGCCATAGTGGACTTGGTGGTGAGAGTAATGGCAACAATGGCTACTTTAAGTAGTGCAATAGTAATGGGCACAGCTAATCA
AACTTTGCCATTTTCAACACAATCTTCTCAGTTCAAAGCCAACTATAAAGATCTTCCTATGTTTATGTTCTTTGTGGTTGCAAATGCCATAGTTTGTGGGTATCT
GTTTCTATCCCTTCCTCTGTCCATTTTCCATGTCATGGAAGTTGCATCAGTCACTCCAAGGCTCATTTTGCTCATCTTTGACACGGTACCTTCGTTCTCTTTCCC
TTTTCTTTTAATAACTTTCACCACTCTAAATTTTAAGTGTTATTTTTTTTAACTATTTAAAAAATTAAGCACCTAAATACTATTGATTTGTATATTATGTTGTAT
ACATTTTATTAGTGTTTTCAAAATTCAAGTGGAACCACTCTTTGAAAGTTGATGAAAAAGAATTATATTATTTTAAATTTGTACTTTGTTTTTTAAATTTGGCCT
ACATGAAAGTATATATGAAAGTCATGATAAGAAAAATCAGAAAAATAGTGTGAAGTACAATTTAAAAAAAAACAAAGAAATAAAATAAAATAGTTGTCAAATTTG
TTAAATAGAATTTGGATATATTTGAATTTTATAAAATTAATCCATTTGTTAATTTTATGTATTAGTATAATGAATTTTTTTAAAAAAAATAGAAAAGTTCGAAAA
ATAATTTATAAAGAAACAAAACTGATACAATTTACTGTACTTGT
Protein sequenceShow/hide protein sequence
MGKTKTESGEIQNLGSKFKNPIGEGAQRGLAIVDLVVRVMATMATLSSAIVMGTANQTLPFSTQSSQFKANYKDLPMFMFFVVANAIVCGYLFLSLPLSIFHVME
VASVTPRLILLIFDTVPSFSFPFLLITFTTLNFKCYFF