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MELO3C012602 (gene) of Melon (DHL92) v4 genome

Gene IDMELO3C012602
OrganismCucumis melo DHL92 (Melon (DHL92) v4)
Descriptionnuclear-pore anchor
Genome locationchr01:19896225..19901071
RNA-Seq ExpressionMELO3C012602
SyntenyMELO3C012602
Gene Ontology termsGO:0006606 - protein import into nucleus (biological process)
GO:0005635 - nuclear envelope (cellular component)
GO:0031981 - nuclear lumen (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0062817.1 nuclear-pore anchor isoform X2 [Cucumis melo var. makuwa]1.1e-3990.1Show/hide
Query:  QEKELIERHNVWLNDELTAKVGSVVELHRLHSDTEAELSAKLRDVERQLDECCSSLKWKKDSVKELEMKLTSAQEELCLSRRMAAENEERLCAEISTCDR
        QEKELIERHNVWLNDELTAKVGSVVEL RLHSDTEAELSAKLRDVERQLDEC SSLKW KDSVKELEMKL SAQEELC SRRMAAENEERL AEIST ++
Subjt:  QEKELIERHNVWLNDELTAKVGSVVELHRLHSDTEAELSAKLRDVERQLDECCSSLKWKKDSVKELEMKLTSAQEELCLSRRMAAENEERLCAEISTCDR

Query:  V
        +
Subjt:  V

XP_011659056.1 nuclear-pore anchor isoform X1 [Cucumis sativus]1.0e-4089.11Show/hide
Query:  QEKELIERHNVWLNDELTAKVGSVVELHRLHSDTEAELSAKLRDVERQLDECCSSLKWKKDSVKELEMKLTSAQEELCLSRRMAAENEERLCAEISTCDR
        QEKELIERHNVWLNDELTAKVGSV++L RLHSDTEAELSAKLRDVERQLDEC SSLKW KDSVKELEMKLTSAQEELC SRRMA+ENEERLCAEIST ++
Subjt:  QEKELIERHNVWLNDELTAKVGSVVELHRLHSDTEAELSAKLRDVERQLDECCSSLKWKKDSVKELEMKLTSAQEELCLSRRMAAENEERLCAEISTCDR

Query:  V
        +
Subjt:  V

XP_011659057.1 nuclear-pore anchor isoform X2 [Cucumis sativus]1.0e-4089.11Show/hide
Query:  QEKELIERHNVWLNDELTAKVGSVVELHRLHSDTEAELSAKLRDVERQLDECCSSLKWKKDSVKELEMKLTSAQEELCLSRRMAAENEERLCAEISTCDR
        QEKELIERHNVWLNDELTAKVGSV++L RLHSDTEAELSAKLRDVERQLDEC SSLKW KDSVKELEMKLTSAQEELC SRRMA+ENEERLCAEIST ++
Subjt:  QEKELIERHNVWLNDELTAKVGSVVELHRLHSDTEAELSAKLRDVERQLDECCSSLKWKKDSVKELEMKLTSAQEELCLSRRMAAENEERLCAEISTCDR

Query:  V
        +
Subjt:  V

XP_016900335.1 PREDICTED: nuclear-pore anchor [Cucumis melo]5.3e-50100Show/hide
Query:  QEKELIERHNVWLNDELTAKVGSVVELHRLHSDTEAELSAKLRDVERQLDECCSSLKWKKDSVKELEMKLTSAQEELCLSRRMAAENEERLCAEISTCDR
        QEKELIERHNVWLNDELTAKVGSVVELHRLHSDTEAELSAKLRDVERQLDECCSSLKWKKDSVKELEMKLTSAQEELCLSRRMAAENEERLCAEISTCDR
Subjt:  QEKELIERHNVWLNDELTAKVGSVVELHRLHSDTEAELSAKLRDVERQLDECCSSLKWKKDSVKELEMKLTSAQEELCLSRRMAAENEERLCAEISTCDR

Query:  VRRSKF
        VRRSKF
Subjt:  VRRSKF

XP_038887699.1 nuclear-pore anchor isoform X1 [Benincasa hispida]3.8e-4087.13Show/hide
Query:  QEKELIERHNVWLNDELTAKVGSVVELHRLHSDTEAELSAKLRDVERQLDECCSSLKWKKDSVKELEMKLTSAQEELCLSRRMAAENEERLCAEISTCDR
        QEKELIERHNVWLNDELTAKVG+++EL RLHSDTEAELSAKLRDVERQLDEC S+LKW KDSVKELEMKLTSAQEELC SR+MAAENEERLCAEIST ++
Subjt:  QEKELIERHNVWLNDELTAKVGSVVELHRLHSDTEAELSAKLRDVERQLDECCSSLKWKKDSVKELEMKLTSAQEELCLSRRMAAENEERLCAEISTCDR

Query:  V
        +
Subjt:  V

TrEMBL top hitse value%identityAlignment
A0A1S3BI04 nuclear-pore anchor-like1.6e-3989.11Show/hide
Query:  QEKELIERHNVWLNDELTAKVGSVVELHRLHSDTEAELSAKLRDVERQLDECCSSLKWKKDSVKELEMKLTSAQEELCLSRRMAAENEERLCAEISTCDR
        QEKELIERHNVWLNDELTAKVGSVVEL RLHSDTEAELSAKLRDVERQLDEC SSLKW KD VKELEMKL SAQEELC SRRMAAENEERL AEIST ++
Subjt:  QEKELIERHNVWLNDELTAKVGSVVELHRLHSDTEAELSAKLRDVERQLDECCSSLKWKKDSVKELEMKLTSAQEELCLSRRMAAENEERLCAEISTCDR

Query:  V
        +
Subjt:  V

A0A1S4DX88 nuclear-pore anchor2.6e-50100Show/hide
Query:  QEKELIERHNVWLNDELTAKVGSVVELHRLHSDTEAELSAKLRDVERQLDECCSSLKWKKDSVKELEMKLTSAQEELCLSRRMAAENEERLCAEISTCDR
        QEKELIERHNVWLNDELTAKVGSVVELHRLHSDTEAELSAKLRDVERQLDECCSSLKWKKDSVKELEMKLTSAQEELCLSRRMAAENEERLCAEISTCDR
Subjt:  QEKELIERHNVWLNDELTAKVGSVVELHRLHSDTEAELSAKLRDVERQLDECCSSLKWKKDSVKELEMKLTSAQEELCLSRRMAAENEERLCAEISTCDR

Query:  VRRSKF
        VRRSKF
Subjt:  VRRSKF

A0A5A7V762 Nuclear-pore anchor isoform X25.4e-4090.1Show/hide
Query:  QEKELIERHNVWLNDELTAKVGSVVELHRLHSDTEAELSAKLRDVERQLDECCSSLKWKKDSVKELEMKLTSAQEELCLSRRMAAENEERLCAEISTCDR
        QEKELIERHNVWLNDELTAKVGSVVEL RLHSDTEAELSAKLRDVERQLDEC SSLKW KDSVKELEMKL SAQEELC SRRMAAENEERL AEIST ++
Subjt:  QEKELIERHNVWLNDELTAKVGSVVELHRLHSDTEAELSAKLRDVERQLDECCSSLKWKKDSVKELEMKLTSAQEELCLSRRMAAENEERLCAEISTCDR

Query:  V
        +
Subjt:  V

A0A6J1HXL4 nuclear-pore anchor isoform X22.0e-3983.17Show/hide
Query:  QEKELIERHNVWLNDELTAKVGSVVELHRLHSDTEAELSAKLRDVERQLDECCSSLKWKKDSVKELEMKLTSAQEELCLSRRMAAENEERLCAEISTCDR
        QEKEL+ERHN WLNDELTAKVGS++E+ RLHSDTEAE+SAKLRDVERQLDEC S+LKW KDSVKELEMKLTSAQEELC SR++AAENEERLCAEIST ++
Subjt:  QEKELIERHNVWLNDELTAKVGSVVELHRLHSDTEAELSAKLRDVERQLDECCSSLKWKKDSVKELEMKLTSAQEELCLSRRMAAENEERLCAEISTCDR

Query:  V
        +
Subjt:  V

A0A6J1I2E6 nuclear-pore anchor isoform X42.0e-3983.17Show/hide
Query:  QEKELIERHNVWLNDELTAKVGSVVELHRLHSDTEAELSAKLRDVERQLDECCSSLKWKKDSVKELEMKLTSAQEELCLSRRMAAENEERLCAEISTCDR
        QEKEL+ERHN WLNDELTAKVGS++E+ RLHSDTEAE+SAKLRDVERQLDEC S+LKW KDSVKELEMKLTSAQEELC SR++AAENEERLCAEIST ++
Subjt:  QEKELIERHNVWLNDELTAKVGSVVELHRLHSDTEAELSAKLRDVERQLDECCSSLKWKKDSVKELEMKLTSAQEELCLSRRMAAENEERLCAEISTCDR

Query:  V
        +
Subjt:  V

SwissProt top hitse value%identityAlignment
A4GSN8 Nuclear-pore anchor3.5e-2052.48Show/hide
Query:  QEKELIERHNVWLNDELTAKVGSVVELHRLHSDTEAELSAKLRDVERQLDECCSSLKWKKDSVKELEMKLTSAQEELCLSRRMAAENEERLCAEISTCDR
        QEKEL ERH  WL++ELTAKV S  EL R HSD E+E+SAKL DVE+   EC SSL W K+ ++ELE K+ S QE+L   +  A   EE+  AE+ T ++
Subjt:  QEKELIERHNVWLNDELTAKVGSVVELHRLHSDTEAELSAKLRDVERQLDECCSSLKWKKDSVKELEMKLTSAQEELCLSRRMAAENEERLCAEISTCDR

Query:  V
        +
Subjt:  V

Arabidopsis top hitse value%identityAlignment
AT1G79280.1 nuclear pore anchor2.5e-2152.48Show/hide
Query:  QEKELIERHNVWLNDELTAKVGSVVELHRLHSDTEAELSAKLRDVERQLDECCSSLKWKKDSVKELEMKLTSAQEELCLSRRMAAENEERLCAEISTCDR
        QEKEL ERH  WL++ELTAKV S  EL R HSD E+E+SAKL DVE+   EC SSL W K+ ++ELE K+ S QE+L   +  A   EE+  AE+ T ++
Subjt:  QEKELIERHNVWLNDELTAKVGSVVELHRLHSDTEAELSAKLRDVERQLDECCSSLKWKKDSVKELEMKLTSAQEELCLSRRMAAENEERLCAEISTCDR

Query:  V
        +
Subjt:  V

AT1G79280.2 nuclear pore anchor2.5e-2152.48Show/hide
Query:  QEKELIERHNVWLNDELTAKVGSVVELHRLHSDTEAELSAKLRDVERQLDECCSSLKWKKDSVKELEMKLTSAQEELCLSRRMAAENEERLCAEISTCDR
        QEKEL ERH  WL++ELTAKV S  EL R HSD E+E+SAKL DVE+   EC SSL W K+ ++ELE K+ S QE+L   +  A   EE+  AE+ T ++
Subjt:  QEKELIERHNVWLNDELTAKVGSVVELHRLHSDTEAELSAKLRDVERQLDECCSSLKWKKDSVKELEMKLTSAQEELCLSRRMAAENEERLCAEISTCDR

Query:  V
        +
Subjt:  V

AT1G79280.3 nuclear pore anchor2.5e-2152.48Show/hide
Query:  QEKELIERHNVWLNDELTAKVGSVVELHRLHSDTEAELSAKLRDVERQLDECCSSLKWKKDSVKELEMKLTSAQEELCLSRRMAAENEERLCAEISTCDR
        QEKEL ERH  WL++ELTAKV S  EL R HSD E+E+SAKL DVE+   EC SSL W K+ ++ELE K+ S QE+L   +  A   EE+  AE+ T ++
Subjt:  QEKELIERHNVWLNDELTAKVGSVVELHRLHSDTEAELSAKLRDVERQLDECCSSLKWKKDSVKELEMKLTSAQEELCLSRRMAAENEERLCAEISTCDR

Query:  V
        +
Subjt:  V


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
GTGCAGGAGAAAGAACTGATTGAGAGGCATAACGTGTGGCTTAATGATGAATTAACTGCTAAAGTAGGCAGTGTCGTTGAGCTGCATAGGCTTCATTCTGATACC
GAGGCTGAACTGTCTGCAAAACTTAGAGATGTTGAGAGACAGTTGGATGAATGCTGTAGCTCCTTAAAATGGAAGAAGGATAGTGTGAAAGAACTTGAGATGAAG
CTAACATCTGCACAGGAGGAATTGTGTTTGTCAAGAAGAATGGCTGCAGAAAATGAGGAACGTCTTTGTGCTGAAATATCAACATGTGATCGAGTACGTAGATCG
AAGTTTTGA
mRNA sequenceShow/hide mRNA sequence
TGTGCAGGAGAAAGAACTGATTGAGAGGCATAACGTGTGGCTTAATGATGAATTAACTGCTAAAGTAGGCAGTGTCGTTGAGCTGCATAGGCTTCATTCTGATAC
CGAGGCTGAACTGTCTGCAAAACTTAGAGATGTTGAGAGACAGTTGGATGAATGCTGTAGCTCCTTAAAATGGAAGAAGGATAGTGTGAAAGAACTTGAGATGAA
GCTAACATCTGCACAGGAGGAATTGTGTTTGTCAAGAAGAATGGCTGCAGAAAATGAGGAACGTCTTTGTGCTGAAATATCAACATGTGATCGAGTACGTAGATC
GAAGTTTTGAGATTGTGCTACGGCAGCCCGTGCAGAGACGTTTGCTGATATCGGGTCAAATGTGCCAGGTGGAAACGAGGGAATTCGATAGGAGGATGGCTTGGA
TATGGAGTTCCCCACTATGTACAACTCGTGAATGAACATGTCGCTTGAAAACATGATGAGTGCACGACCTAGTAGGTCAAGCGACACCAAGAGGGGTTCCAGCGA
GTTGAAGAGGAAACACAACATGCAAAATTTTGAGATTTTTGAGCCCATTCGCGATGCCATGGACTGCACGAATGACCAGTTGAGGGTCATTGCGAATTGGCCAGA
TAGAGCTAGCCAGAAGGAAGACGCTTTGGTACAGGAAGTCATTACGCAGGTGCAGTCCATTCCTCAACTCAGTGTAGAGGATAGTGCAAAATGTATGATGGTAAT
GGCATAGAAGTCGTCGCTTATGAAAACCTTCTAGGTCTTGCTCAATGAGATGAAGTTCGCCTATTGCAGGGTCATTCTGATGTAATTGATGGCACTATTTAAATG
CATTACGAATAATATTTTTTTTCATATTTCATTTTGTTTCAA
Protein sequenceShow/hide protein sequence
VQEKELIERHNVWLNDELTAKVGSVVELHRLHSDTEAELSAKLRDVERQLDECCSSLKWKKDSVKELEMKLTSAQEELCLSRRMAAENEERLCAEISTCDRVRRS
KF