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MELO3C012937 (gene) of Melon (DHL92) v4 genome

Gene IDMELO3C012937
OrganismCucumis melo DHL92 (Melon (DHL92) v4)
Descriptioncytochrome c oxidase subunit 5b-1, mitochondrial-like
Genome locationchr04:14551497..14558955
RNA-Seq ExpressionMELO3C012937
SyntenyMELO3C012937
Gene Ontology termsGO:0006123 - mitochondrial electron transport, cytochrome c to oxygen (biological process)
GO:0005751 - mitochondrial respiratory chain complex IV (cellular component)
InterPro domainsIPR002124 - Cytochrome c oxidase, subunit Vb


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0038130.1 cytochrome c oxidase subunit 5b-2 [Cucumis melo var. makuwa]8.6e-4362.64Show/hide
Query:  MWRRLLSSSLKSLKSLPSSSTPASAPLGCISQAARLGAASHLSPSSTVSLFARHYASDSADTGLKKKVEDVMPIATGHEREELEASLEVK----------
        MWRRLLSSSLKSLKSLPSSSTPASAPLGCISQAARLGAASHLSPSSTVSLFARHYASDSADTGLKKKVEDVMPIATGHEREELEASLE K          
Subjt:  MWRRLLSSSLKSLKSLPSSSTPASAPLGCISQAARLGAASHLSPSSTVSLFARHYASDSADTGLKKKVEDVMPIATGHEREELEASLEVK----------

Query:  ----------------------------------------------------YLLEVVGPGGSPDGYGDDDHHH
                                                            ++LEVVGPGGSPDGYGDDDHHH
Subjt:  ----------------------------------------------------YLLEVVGPGGSPDGYGDDDHHH

XP_004151243.1 cytochrome c oxidase subunit 5b-2, mitochondrial [Cucumis sativus]6.8e-4059.77Show/hide
Query:  MWRRLLSSSLKSLKSLPSSSTPASAPLGCISQAARLGAASHLSPSSTVSLFARHYASDSADTGLKKKVEDVMPIATGHEREELEASLEVK----------
        MWRRLLSSSLKSLKSLPSSSTPASAPLGCISQA RL AASHLSPSST+ LFARHYASDSADTGLKK VEDVMPIATGHEREELEASLE K          
Subjt:  MWRRLLSSSLKSLKSLPSSSTPASAPLGCISQAARLGAASHLSPSSTVSLFARHYASDSADTGLKKKVEDVMPIATGHEREELEASLEVK----------

Query:  ----------------------------------------------------YLLEVVGPGGSPDGYGDDDHHH
                                                            ++LEVVGPGGSPDGYGDDDHHH
Subjt:  ----------------------------------------------------YLLEVVGPGGSPDGYGDDDHHH

XP_016900404.1 PREDICTED: LOW QUALITY PROTEIN: cytochrome c oxidase subunit 5b-2, mitochondrial [Cucumis melo]1.0e-4057.14Show/hide
Query:  MWRRLLSSSLKSLKSLPSSSTPASAPLGCISQAARLGAASHLSPSSTVSLFARHYASDSADTGLKKKVEDVMPIATGHEREELEASLEV-----------
        MWRRLLSSSLKSLKSLPSSSTPASAPLGCISQAARLGAASHLSPSSTVSLFARHYASDSADTGLKKKVEDVMPIATGHEREELEASLE+           
Subjt:  MWRRLLSSSLKSLKSLPSSSTPASAPLGCISQAARLGAASHLSPSSTVSLFARHYASDSADTGLKKKVEDVMPIATGHEREELEASLEV-----------

Query:  ------------------------------------------------------------------KYLLEVVGPGGSPDGYGDDDHHH
                                                                           ++LEVVGPGGSPDGYGDDDHHH
Subjt:  ------------------------------------------------------------------KYLLEVVGPGGSPDGYGDDDHHH

XP_022956147.1 cytochrome c oxidase subunit 5b-1, mitochondrial-like [Cucurbita moschata]2.3e-3555.75Show/hide
Query:  MWRRLLSSSLKSLKSLPSSSTPASAPLGCISQAARLGAASHLSPSSTVSLFARHYASDSADTGLKKKVEDVMPIATGHEREELEASLEVK----------
        MWRRLL+S LKSLKSLPSSSTPASAPLGCIS+A RLGAASH+SPS+ VSLFAR+YASDSA TG+ KKVEDVMPIATGHEREELEASLE K          
Subjt:  MWRRLLSSSLKSLKSLPSSSTPASAPLGCISQAARLGAASHLSPSSTVSLFARHYASDSADTGLKKKVEDVMPIATGHEREELEASLEVK----------

Query:  ----------------------------------------------------YLLEVVGPGGSPDGYGDDDHHH
                                                            ++LEVVGPGGSPDG+GDDDHHH
Subjt:  ----------------------------------------------------YLLEVVGPGGSPDGYGDDDHHH

XP_038896495.1 cytochrome c oxidase subunit 5b-2, mitochondrial-like [Benincasa hispida]7.8e-3655.75Show/hide
Query:  MWRRLLSSSLKSLKSLPSSSTPASAPLGCISQAARLGAASHLSPSSTVSLFARHYASDSADTGLKKKVEDVMPIATGHEREELEASLEVK----------
        MWRRLLSS LKSLKSLPSSSTPASAPLG IS+A R  A SH+SPS  VSLFA HYASDSADTGLKKKVED+MPIATGHEREELEASLE K          
Subjt:  MWRRLLSSSLKSLKSLPSSSTPASAPLGCISQAARLGAASHLSPSSTVSLFARHYASDSADTGLKKKVEDVMPIATGHEREELEASLEVK----------

Query:  ----------------------------------------------------YLLEVVGPGGSPDGYGDDDHHH
                                                            ++LEVVGPGGSPDGYGDDDHHH
Subjt:  ----------------------------------------------------YLLEVVGPGGSPDGYGDDDHHH

TrEMBL top hitse value%identityAlignment
A0A0A0LDH6 Uncharacterized protein3.3e-4059.77Show/hide
Query:  MWRRLLSSSLKSLKSLPSSSTPASAPLGCISQAARLGAASHLSPSSTVSLFARHYASDSADTGLKKKVEDVMPIATGHEREELEASLEVK----------
        MWRRLLSSSLKSLKSLPSSSTPASAPLGCISQA RL AASHLSPSST+ LFARHYASDSADTGLKK VEDVMPIATGHEREELEASLE K          
Subjt:  MWRRLLSSSLKSLKSLPSSSTPASAPLGCISQAARLGAASHLSPSSTVSLFARHYASDSADTGLKKKVEDVMPIATGHEREELEASLEVK----------

Query:  ----------------------------------------------------YLLEVVGPGGSPDGYGDDDHHH
                                                            ++LEVVGPGGSPDGYGDDDHHH
Subjt:  ----------------------------------------------------YLLEVVGPGGSPDGYGDDDHHH

A0A1S4DWP7 LOW QUALITY PROTEIN: cytochrome c oxidase subunit 5b-2, mitochondrial5.1e-4157.14Show/hide
Query:  MWRRLLSSSLKSLKSLPSSSTPASAPLGCISQAARLGAASHLSPSSTVSLFARHYASDSADTGLKKKVEDVMPIATGHEREELEASLEV-----------
        MWRRLLSSSLKSLKSLPSSSTPASAPLGCISQAARLGAASHLSPSSTVSLFARHYASDSADTGLKKKVEDVMPIATGHEREELEASLE+           
Subjt:  MWRRLLSSSLKSLKSLPSSSTPASAPLGCISQAARLGAASHLSPSSTVSLFARHYASDSADTGLKKKVEDVMPIATGHEREELEASLEV-----------

Query:  ------------------------------------------------------------------KYLLEVVGPGGSPDGYGDDDHHH
                                                                           ++LEVVGPGGSPDGYGDDDHHH
Subjt:  ------------------------------------------------------------------KYLLEVVGPGGSPDGYGDDDHHH

A0A5A7T437 Cytochrome c oxidase subunit 5b-24.2e-4362.64Show/hide
Query:  MWRRLLSSSLKSLKSLPSSSTPASAPLGCISQAARLGAASHLSPSSTVSLFARHYASDSADTGLKKKVEDVMPIATGHEREELEASLEVK----------
        MWRRLLSSSLKSLKSLPSSSTPASAPLGCISQAARLGAASHLSPSSTVSLFARHYASDSADTGLKKKVEDVMPIATGHEREELEASLE K          
Subjt:  MWRRLLSSSLKSLKSLPSSSTPASAPLGCISQAARLGAASHLSPSSTVSLFARHYASDSADTGLKKKVEDVMPIATGHEREELEASLEVK----------

Query:  ----------------------------------------------------YLLEVVGPGGSPDGYGDDDHHH
                                                            ++LEVVGPGGSPDGYGDDDHHH
Subjt:  ----------------------------------------------------YLLEVVGPGGSPDGYGDDDHHH

A0A6J1GVI7 cytochrome c oxidase subunit 5b-1, mitochondrial-like1.1e-3555.75Show/hide
Query:  MWRRLLSSSLKSLKSLPSSSTPASAPLGCISQAARLGAASHLSPSSTVSLFARHYASDSADTGLKKKVEDVMPIATGHEREELEASLEVK----------
        MWRRLL+S LKSLKSLPSSSTPASAPLGCIS+A RLGAASH+SPS+ VSLFAR+YASDSA TG+ KKVEDVMPIATGHEREELEASLE K          
Subjt:  MWRRLLSSSLKSLKSLPSSSTPASAPLGCISQAARLGAASHLSPSSTVSLFARHYASDSADTGLKKKVEDVMPIATGHEREELEASLEVK----------

Query:  ----------------------------------------------------YLLEVVGPGGSPDGYGDDDHHH
                                                            ++LEVVGPGGSPDG+GDDDHHH
Subjt:  ----------------------------------------------------YLLEVVGPGGSPDGYGDDDHHH

A0A6J1IV42 cytochrome c oxidase subunit 5b-1, mitochondrial-like1.1e-3555.75Show/hide
Query:  MWRRLLSSSLKSLKSLPSSSTPASAPLGCISQAARLGAASHLSPSSTVSLFARHYASDSADTGLKKKVEDVMPIATGHEREELEASLEVK----------
        MWRRLL+S LKSLKSLPSSSTPASAPLGCIS+A RLGAASH+SPS+ VSLFAR+YASDSA TG+ KKVEDVMPIATGHEREELEASLE K          
Subjt:  MWRRLLSSSLKSLKSLPSSSTPASAPLGCISQAARLGAASHLSPSSTVSLFARHYASDSADTGLKKKVEDVMPIATGHEREELEASLEVK----------

Query:  ----------------------------------------------------YLLEVVGPGGSPDGYGDDDHHH
                                                            ++LEVVGPGGSPDG+GDDDHHH
Subjt:  ----------------------------------------------------YLLEVVGPGGSPDGYGDDDHHH

SwissProt top hitse value%identityAlignment
Q9LW15 Cytochrome c oxidase subunit 5b-1, mitochondrial3.7e-1232.39Show/hide
Query:  MWRRLLSSSLKSLKSLPSSSTPASAPLGCISQAARLGAASHLSPSSTVSLFARHYASDSADTGLKKKVEDVMPIATGHEREELEASLEVKYL--------
        MWRR++SS LK+L +   +++P  +            AA+  + S++  +  R ++SDS +T   KKVEDVMPIATGHE+EELEA LE + L        
Subjt:  MWRRLLSSSLKSLKSLPSSSTPASAPLGCISQAARLGAASHLSPSSTVSLFARHYASDSADTGLKKKVEDVMPIATGHEREELEASLEVKYL--------

Query:  ------------------------------------------------------LEVVGPGGSPDGYG--DDDHHH
                                                              LEVVGPGG PDG+G  DD+HHH
Subjt:  ------------------------------------------------------LEVVGPGGSPDGYG--DDDHHH

Q9SSB8 Cytochrome c oxidase subunit 5b-2, mitochondrial2.1e-1233.14Show/hide
Query:  MWRRLLSSSLKSLKSLPSSSTPASAPLGCISQAARLGAASHLSPSSTVSLFARHYASDSADTGLKKKVEDVMPIATGHEREELEASLEVKYL--------
        MWRR++SS LKS+ ++ S + P+       S    L   +   P+ + S+F+R   S +ADT +KK+VEDVMPIATGHE+EEL+A LE + L        
Subjt:  MWRRLLSSSLKSLKSLPSSSTPASAPLGCISQAARLGAASHLSPSSTVSLFARHYASDSADTGLKKKVEDVMPIATGHEREELEASLEVKYL--------

Query:  ------------------------------------------------------LEVVGPGGSPDGYGDDDH
                                                              LEVVGPGG PDG+GDD H
Subjt:  ------------------------------------------------------LEVVGPGGSPDGYGDDDH

Arabidopsis top hitse value%identityAlignment
AT1G80230.1 Rubredoxin-like superfamily protein1.5e-1333.14Show/hide
Query:  MWRRLLSSSLKSLKSLPSSSTPASAPLGCISQAARLGAASHLSPSSTVSLFARHYASDSADTGLKKKVEDVMPIATGHEREELEASLEVKYL--------
        MWRR++SS LKS+ ++ S + P+       S    L   +   P+ + S+F+R   S +ADT +KK+VEDVMPIATGHE+EEL+A LE + L        
Subjt:  MWRRLLSSSLKSLKSLPSSSTPASAPLGCISQAARLGAASHLSPSSTVSLFARHYASDSADTGLKKKVEDVMPIATGHEREELEASLEVKYL--------

Query:  ------------------------------------------------------LEVVGPGGSPDGYGDDDH
                                                              LEVVGPGG PDG+GDD H
Subjt:  ------------------------------------------------------LEVVGPGGSPDGYGDDDH

AT3G15640.1 Rubredoxin-like superfamily protein2.6e-1332.39Show/hide
Query:  MWRRLLSSSLKSLKSLPSSSTPASAPLGCISQAARLGAASHLSPSSTVSLFARHYASDSADTGLKKKVEDVMPIATGHEREELEASLEVKYL--------
        MWRR++SS LK+L +   +++P  +            AA+  + S++  +  R ++SDS +T   KKVEDVMPIATGHE+EELEA LE + L        
Subjt:  MWRRLLSSSLKSLKSLPSSSTPASAPLGCISQAARLGAASHLSPSSTVSLFARHYASDSADTGLKKKVEDVMPIATGHEREELEASLEVKYL--------

Query:  ------------------------------------------------------LEVVGPGGSPDGYG--DDDHHH
                                                              LEVVGPGG PDG+G  DD+HHH
Subjt:  ------------------------------------------------------LEVVGPGGSPDGYG--DDDHHH

AT3G15640.2 Rubredoxin-like superfamily protein6.4e-1232.39Show/hide
Query:  MWRRLLSSSLKSLKSLPSSSTPASAPLGCISQAARLGAASHLSPSSTVSLFARHYASDSADTGLKKKVEDVMPIATGHEREELEASLEVKYL--------
        MWRR++SS LK+L +   +++P  +            AA+  + S++  +  R ++SDS +T   KKVEDVMPIATGHE+EELEA LE + L        
Subjt:  MWRRLLSSSLKSLKSLPSSSTPASAPLGCISQAARLGAASHLSPSSTVSLFARHYASDSADTGLKKKVEDVMPIATGHEREELEASLEVKYL--------

Query:  ------------------------------------------------------LEVVGPGGSPDGYG--DDDHHH
                                                              LEVVGPGG PDG+G  DD+HHH
Subjt:  ------------------------------------------------------LEVVGPGGSPDGYG--DDDHHH


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTGGAGAAGATTGCTCTCTTCGTCGCTCAAATCCTTAAAATCTCTTCCCTCTTCATCGACGCCTGCATCCGCTCCGTTGGGATGCATTTCCCAAGCCGCTCGA
CTCGGTGCTGCTTCTCATCTTTCTCCTTCCTCGACTGTCTCGCTTTTCGCTCGCCATTACGCCTCTGATTCTGCTGATACTGGTCTGAAGAAGAAGGTTGAGGAT
GTTATGCCAATCGCAACCGGACACGAGCGTGAAGAGCTTGAAGCTTCTCTTGAGGTGAAGTATCTTTTGGAAGTTGTGGGACCTGGAGGCTCGCCTGATGGTTAT
GGAGATGATGATCACCATCATTGA
mRNA sequenceShow/hide mRNA sequence
ATAATATACACTCAAAAACCTATTATGTCTTATTGACTACTATAACCTACCCTCGAACCACCCTTTAAAAGTTCAATTTGAAAAAATGAGATAAATTTAGAGTTG
AAAAATTCATTTTTCATTCCCAATTTAAAATAGTTGCAGCACGTGCAACATATTTTGACTCGTGCGAAATCATTTTGGTTAATCGCCTCCTCCTCTTGACTAGTT
CCGCCTTTTTCTTTTCTCCCATTTCCAAAAGCATAGAAACTGCTGAAAGGGCGAGAGAGTGAAGAGCAAAAGAGAGCCAAATTCGCCGTTCAAGAGGTGCGACCT
GAGATCATAGCCGGAGTATTCACCGTTTTCAATCTACGATGTGGAGAAGATTGCTCTCTTCGTCGCTCAAATCCTTAAAATCTCTTCCCTCTTCATCGACGCCTG
CATCCGCTCCGTTGGGATGCATTTCCCAAGCCGCTCGACTCGGTGCTGCTTCTCATCTTTCTCCTTCCTCGACTGTCTCGCTTTTCGCTCGCCATTACGCCTCTG
ATTCTGCTGATACTGGTCTGAAGAAGAAGGTTGAGGATGTTATGCCAATCGCAACCGGACACGAGCGTGAAGAGCTTGAAGCTTCTCTTGAGGTGAAGTATCTTT
TGGAAGTTGTGGGACCTGGAGGCTCGCCTGATGGTTATGGAGATGATGATCACCATCATTGATTAACAGTCATCCATCTCGAGAATAAAACTTGGCTTTTAGACG
AAGAAACAGATATCACAATTGGTGCTATTTAAAGCTGTGTTTTGTTTGTTTTCTACTGTTCCTTGTTTCTTTTGCAGTTCCTTCAGCAACAAAAAGGAATTCTGA
GTTTTTTCGAAGTCAGTCGCGGACACTGGCAACTCATCTGCTAGAAGTACAATTTTTTTTAGCTTTTCTTCTATGAATTTCCAAATAATTGAAGACATCTCAATT
CTTTTCCAAACAAACTCCTTGATCTTAGAAAATAATCTCATGAACCTGCGGAAACAAATCGATTTTAGGAAGTTTGAAATGGCTGTATGGAAGTGGCTTTAGATG
CCAACTCATTGCCACTTTTATTGCAAATCTTGTCCATTGTGTTTTGTTTTAATTTCTTTTTCATAACCCACTTTGTCCTTAAGACCTCTCTTCTTGATGTCAATG
TGGGGCTTCAAGTCTTTCTTATAATTCTTTTTAAAATCTGTGATGCTGTTTGCTTAGTTTGGACTTTGTTGCTGAAAGTTAATTTGTTGAAAGAATATGTATTTT
GAAAATTTTGGGTTTTTTTCTTTGACTTTTGGAAATTTTAGTAGTTTGTTGAAATCATG
Protein sequenceShow/hide protein sequence
MWRRLLSSSLKSLKSLPSSSTPASAPLGCISQAARLGAASHLSPSSTVSLFARHYASDSADTGLKKKVEDVMPIATGHEREELEASLEVKYLLEVVGPGGSPDGY
GDDDHHH