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MELO3C013165 (gene) of Melon (DHL92) v4 genome

Gene IDMELO3C013165
OrganismCucumis melo DHL92 (Melon (DHL92) v4)
Descriptionmediator of RNA polymerase II transcription subunit 12-like isoform X1
Genome locationchr03:18404323..18406110
RNA-Seq ExpressionMELO3C013165
SyntenyMELO3C013165
Gene Ontology termsGO:0010073 - meristem maintenance (biological process)
GO:0008270 - zinc ion binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0035034.1 serine/threonine-protein phosphatase 7 long form-like protein [Cucumis melo var. makuwa]5.1e-7090.8Show/hide
Query:  QRRRPLVQEPDQLEEVDQHGEEVPPMTQTQTQSEHNYVSPVMMMPTFGTTYYDSGVGQSSDFGRGYYNSEAGQSSTDFGQQYYDLGSDPSYSYMHGHGRG
        QRRRPLVQEPDQLEEVDQHGEEVPPMTQTQTQSEHNYVSPVMMMPTFGTTYYDSGVGQSSDFGRGYYNSEAGQSSTDFGQQYYDLGSDPSYSYMHGHGRG
Subjt:  QRRRPLVQEPDQLEEVDQHGEEVPPMTQTQTQSEHNYVSPVMMMPTFGTTYYDSGVGQSSDFGRGYYNSEAGQSSTDFGQQYYDLGSDPSYSYMHGHGRG

Query:  RGEHNEYLYYEVP---------------AAVPEQSDEQQQQENAAVPEQSDEQQQQENHEEIQ
        RGEHNEYLYYEVP               AAVPEQSDEQQQQENAAVPEQSDEQQQQENHEEIQ
Subjt:  RGEHNEYLYYEVP---------------AAVPEQSDEQQQQENAAVPEQSDEQQQQENHEEIQ

KAA0051233.1 mediator of RNA polymerase II transcription subunit 12-like isoform X1 [Cucumis melo var. makuwa]3.9e-7094.77Show/hide
Query:  LPFLVQRRRPLVQEPDQLEEVDQHGEEVPPMTQTQTQSEHNYVSPVMMMPTFGTTYYDSGVGQSSDFGRGYYNSEAGQSSTDFGQQYYDLGSDPSYSYMH
        +P  VQRRRPLVQEPDQLEEVDQHGEEVPPMTQTQTQSEHNYVSPVMMMPTFGTTYYDSGVGQSSDFGRGYYNSEAGQSSTDFGQQYYDLGSDPS SYMH
Subjt:  LPFLVQRRRPLVQEPDQLEEVDQHGEEVPPMTQTQTQSEHNYVSPVMMMPTFGTTYYDSGVGQSSDFGRGYYNSEAGQSSTDFGQQYYDLGSDPSYSYMH

Query:  GHGRGRGEHNEYLYYEVPAAVPEQSDEQQQQENAAVPEQSDEQQQQENHEEIQ
         HGRGRGEHNEYLYYEVPAAVP+QSDEQQQQENA VPEQSDEQQQQEN EEIQ
Subjt:  GHGRGRGEHNEYLYYEVPAAVPEQSDEQQQQENAAVPEQSDEQQQQENHEEIQ

TYK27427.1 mediator of RNA polymerase II transcription subunit 12-like isoform X1 [Cucumis melo var. makuwa]1.0e-7095.42Show/hide
Query:  LPFLVQRRRPLVQEPDQLEEVDQHGEEVPPMTQTQTQSEHNYVSPVMMMPTFGTTYYDSGVGQSSDFGRGYYNSEAGQSSTDFGQQYYDLGSDPSYSYMH
        +P  VQRRRPLVQE DQLEEVDQHGEEVPPMTQTQTQSEHNYVSPVMMMPTFG TYYDSGVGQSSDFGRGYYNSEAGQSSTDFGQQYYDLGSDPS SYMH
Subjt:  LPFLVQRRRPLVQEPDQLEEVDQHGEEVPPMTQTQTQSEHNYVSPVMMMPTFGTTYYDSGVGQSSDFGRGYYNSEAGQSSTDFGQQYYDLGSDPSYSYMH

Query:  GHGRGRGEHNEYLYYEVPAAVPEQSDEQQQQENAAVPEQSDEQQQQENHEEIQ
        GHGRGRGEHNEYLYY+VPAAVPEQSDEQQQQENAAVPEQSDEQQQQENHEEIQ
Subjt:  GHGRGRGEHNEYLYYEVPAAVPEQSDEQQQQENAAVPEQSDEQQQQENHEEIQ

XP_008449513.1 PREDICTED: mediator of RNA polymerase II transcription subunit 12-like isoform X1 [Cucumis melo]1.0e-7095.42Show/hide
Query:  LPFLVQRRRPLVQEPDQLEEVDQHGEEVPPMTQTQTQSEHNYVSPVMMMPTFGTTYYDSGVGQSSDFGRGYYNSEAGQSSTDFGQQYYDLGSDPSYSYMH
        +P  VQRRRPLVQE DQLEEVDQHGEEVPPMTQTQTQSEHNYVSPVMMMPTFG TYYDSGVGQSSDFGRGYYNSEAGQSSTDFGQQYYDLGSDPS SYMH
Subjt:  LPFLVQRRRPLVQEPDQLEEVDQHGEEVPPMTQTQTQSEHNYVSPVMMMPTFGTTYYDSGVGQSSDFGRGYYNSEAGQSSTDFGQQYYDLGSDPSYSYMH

Query:  GHGRGRGEHNEYLYYEVPAAVPEQSDEQQQQENAAVPEQSDEQQQQENHEEIQ
        GHGRGRGEHNEYLYY+VPAAVPEQSDEQQQQENAAVPEQSDEQQQQENHEEIQ
Subjt:  GHGRGRGEHNEYLYYEVPAAVPEQSDEQQQQENAAVPEQSDEQQQQENHEEIQ

XP_016900498.1 PREDICTED: GATA zinc finger domain-containing protein 10-like isoform X2 [Cucumis melo]1.0e-7095.42Show/hide
Query:  LPFLVQRRRPLVQEPDQLEEVDQHGEEVPPMTQTQTQSEHNYVSPVMMMPTFGTTYYDSGVGQSSDFGRGYYNSEAGQSSTDFGQQYYDLGSDPSYSYMH
        +P  VQRRRPLVQE DQLEEVDQHGEEVPPMTQTQTQSEHNYVSPVMMMPTFG TYYDSGVGQSSDFGRGYYNSEAGQSSTDFGQQYYDLGSDPS SYMH
Subjt:  LPFLVQRRRPLVQEPDQLEEVDQHGEEVPPMTQTQTQSEHNYVSPVMMMPTFGTTYYDSGVGQSSDFGRGYYNSEAGQSSTDFGQQYYDLGSDPSYSYMH

Query:  GHGRGRGEHNEYLYYEVPAAVPEQSDEQQQQENAAVPEQSDEQQQQENHEEIQ
        GHGRGRGEHNEYLYY+VPAAVPEQSDEQQQQENAAVPEQSDEQQQQENHEEIQ
Subjt:  GHGRGRGEHNEYLYYEVPAAVPEQSDEQQQQENAAVPEQSDEQQQQENHEEIQ

TrEMBL top hitse value%identityAlignment
A0A1S3BLK4 mediator of RNA polymerase II transcription subunit 12-like isoform X15.0e-7195.42Show/hide
Query:  LPFLVQRRRPLVQEPDQLEEVDQHGEEVPPMTQTQTQSEHNYVSPVMMMPTFGTTYYDSGVGQSSDFGRGYYNSEAGQSSTDFGQQYYDLGSDPSYSYMH
        +P  VQRRRPLVQE DQLEEVDQHGEEVPPMTQTQTQSEHNYVSPVMMMPTFG TYYDSGVGQSSDFGRGYYNSEAGQSSTDFGQQYYDLGSDPS SYMH
Subjt:  LPFLVQRRRPLVQEPDQLEEVDQHGEEVPPMTQTQTQSEHNYVSPVMMMPTFGTTYYDSGVGQSSDFGRGYYNSEAGQSSTDFGQQYYDLGSDPSYSYMH

Query:  GHGRGRGEHNEYLYYEVPAAVPEQSDEQQQQENAAVPEQSDEQQQQENHEEIQ
        GHGRGRGEHNEYLYY+VPAAVPEQSDEQQQQENAAVPEQSDEQQQQENHEEIQ
Subjt:  GHGRGRGEHNEYLYYEVPAAVPEQSDEQQQQENAAVPEQSDEQQQQENHEEIQ

A0A1S4DWZ9 GATA zinc finger domain-containing protein 10-like isoform X25.0e-7195.42Show/hide
Query:  LPFLVQRRRPLVQEPDQLEEVDQHGEEVPPMTQTQTQSEHNYVSPVMMMPTFGTTYYDSGVGQSSDFGRGYYNSEAGQSSTDFGQQYYDLGSDPSYSYMH
        +P  VQRRRPLVQE DQLEEVDQHGEEVPPMTQTQTQSEHNYVSPVMMMPTFG TYYDSGVGQSSDFGRGYYNSEAGQSSTDFGQQYYDLGSDPS SYMH
Subjt:  LPFLVQRRRPLVQEPDQLEEVDQHGEEVPPMTQTQTQSEHNYVSPVMMMPTFGTTYYDSGVGQSSDFGRGYYNSEAGQSSTDFGQQYYDLGSDPSYSYMH

Query:  GHGRGRGEHNEYLYYEVPAAVPEQSDEQQQQENAAVPEQSDEQQQQENHEEIQ
        GHGRGRGEHNEYLYY+VPAAVPEQSDEQQQQENAAVPEQSDEQQQQENHEEIQ
Subjt:  GHGRGRGEHNEYLYYEVPAAVPEQSDEQQQQENAAVPEQSDEQQQQENHEEIQ

A0A5A7SUU1 Serine/threonine-protein phosphatase 7 long form-like protein2.5e-7090.8Show/hide
Query:  QRRRPLVQEPDQLEEVDQHGEEVPPMTQTQTQSEHNYVSPVMMMPTFGTTYYDSGVGQSSDFGRGYYNSEAGQSSTDFGQQYYDLGSDPSYSYMHGHGRG
        QRRRPLVQEPDQLEEVDQHGEEVPPMTQTQTQSEHNYVSPVMMMPTFGTTYYDSGVGQSSDFGRGYYNSEAGQSSTDFGQQYYDLGSDPSYSYMHGHGRG
Subjt:  QRRRPLVQEPDQLEEVDQHGEEVPPMTQTQTQSEHNYVSPVMMMPTFGTTYYDSGVGQSSDFGRGYYNSEAGQSSTDFGQQYYDLGSDPSYSYMHGHGRG

Query:  RGEHNEYLYYEVP---------------AAVPEQSDEQQQQENAAVPEQSDEQQQQENHEEIQ
        RGEHNEYLYYEVP               AAVPEQSDEQQQQENAAVPEQSDEQQQQENHEEIQ
Subjt:  RGEHNEYLYYEVP---------------AAVPEQSDEQQQQENAAVPEQSDEQQQQENHEEIQ

A0A5A7U5S8 Mediator of RNA polymerase II transcription subunit 12-like isoform X11.9e-7094.77Show/hide
Query:  LPFLVQRRRPLVQEPDQLEEVDQHGEEVPPMTQTQTQSEHNYVSPVMMMPTFGTTYYDSGVGQSSDFGRGYYNSEAGQSSTDFGQQYYDLGSDPSYSYMH
        +P  VQRRRPLVQEPDQLEEVDQHGEEVPPMTQTQTQSEHNYVSPVMMMPTFGTTYYDSGVGQSSDFGRGYYNSEAGQSSTDFGQQYYDLGSDPS SYMH
Subjt:  LPFLVQRRRPLVQEPDQLEEVDQHGEEVPPMTQTQTQSEHNYVSPVMMMPTFGTTYYDSGVGQSSDFGRGYYNSEAGQSSTDFGQQYYDLGSDPSYSYMH

Query:  GHGRGRGEHNEYLYYEVPAAVPEQSDEQQQQENAAVPEQSDEQQQQENHEEIQ
         HGRGRGEHNEYLYYEVPAAVP+QSDEQQQQENA VPEQSDEQQQQEN EEIQ
Subjt:  GHGRGRGEHNEYLYYEVPAAVPEQSDEQQQQENAAVPEQSDEQQQQENHEEIQ

A0A5D3DUI1 Mediator of RNA polymerase II transcription subunit 12-like isoform X15.0e-7195.42Show/hide
Query:  LPFLVQRRRPLVQEPDQLEEVDQHGEEVPPMTQTQTQSEHNYVSPVMMMPTFGTTYYDSGVGQSSDFGRGYYNSEAGQSSTDFGQQYYDLGSDPSYSYMH
        +P  VQRRRPLVQE DQLEEVDQHGEEVPPMTQTQTQSEHNYVSPVMMMPTFG TYYDSGVGQSSDFGRGYYNSEAGQSSTDFGQQYYDLGSDPS SYMH
Subjt:  LPFLVQRRRPLVQEPDQLEEVDQHGEEVPPMTQTQTQSEHNYVSPVMMMPTFGTTYYDSGVGQSSDFGRGYYNSEAGQSSTDFGQQYYDLGSDPSYSYMH

Query:  GHGRGRGEHNEYLYYEVPAAVPEQSDEQQQQENAAVPEQSDEQQQQENHEEIQ
        GHGRGRGEHNEYLYY+VPAAVPEQSDEQQQQENAAVPEQSDEQQQQENHEEIQ
Subjt:  GHGRGRGEHNEYLYYEVPAAVPEQSDEQQQQENAAVPEQSDEQQQQENHEEIQ

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTTCCTACCATTCTTAGTTCAGAGGAGACGTCCTCTAGTGCAAGAGCCCGATCAATTGGAAGAAGTTGACCAACACGGGGAAGAAGTGCCTCCCATGACACAGACACA
GACACAAAGCGAGCATAATTACGTTAGTCCAGTAATGATGATGCCAACATTTGGAACGACATATTATGATTCAGGAGTCGGTCAATCGTCAGACTTTGGAAGAGGATATT
ACAATTCAGAGGCAGGTCAATCATCAACGGACTTTGGGCAACAATACTATGATTTAGGGAGCGATCCATCGTATTCATACATGCATGGTCACGGGCGTGGTCGTGGAGAA
CATAATGAATATTTGTACTACGAAGTGCCTGCAGCAGTACCCGAGCAATCAGATGAGCAACAGCAACAAGAGAATGCAGCAGTACCCGAGCAATCAGATGAGCAACAACA
ACAAGAGAATCATGAGGAAATACAATAA
mRNA sequenceShow/hide mRNA sequence
GGAGTATTTTTGCAGATAAATCAACCGTTATGTGCACCTAATGTTCCTACCATTCTTAGTTCAGAGGAGACGTCCTCTAGTGCAAGAGCCCGATCAATTGGAAGAAGTTG
ACCAACACGGGGAAGAAGTGCCTCCCATGACACAGACACAGACACAAAGCGAGCATAATTACGTTAGTCCAGTAATGATGATGCCAACATTTGGAACGACATATTATGAT
TCAGGAGTCGGTCAATCGTCAGACTTTGGAAGAGGATATTACAATTCAGAGGCAGGTCAATCATCAACGGACTTTGGGCAACAATACTATGATTTAGGGAGCGATCCATC
GTATTCATACATGCATGGTCACGGGCGTGGTCGTGGAGAACATAATGAATATTTGTACTACGAAGTGCCTGCAGCAGTACCCGAGCAATCAGATGAGCAACAGCAACAAG
AGAATGCAGCAGTACCCGAGCAATCAGATGAGCAACAACAACAAGAGAATCATGAGGAAATACAATAACAAAGAGTTCAAAGTCGACGACGACAACCAGCTAGAAATCGT
CGACGTCCAGGTTGTGGAACACATTGATTTTTTTTCTTTGAATGAAAATTGTTAAATTATTGTATTAAACATTTTGATTCATATTTAATTATTTTACAATCAAAAGCACT
TA
Protein sequenceShow/hide protein sequence
MFLPFLVQRRRPLVQEPDQLEEVDQHGEEVPPMTQTQTQSEHNYVSPVMMMPTFGTTYYDSGVGQSSDFGRGYYNSEAGQSSTDFGQQYYDLGSDPSYSYMHGHGRGRGE
HNEYLYYEVPAAVPEQSDEQQQQENAAVPEQSDEQQQQENHEEIQ