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MELO3C013181 (gene) of Melon (DHL92) v4 genome

Gene IDMELO3C013181
OrganismCucumis melo DHL92 (Melon (DHL92) v4)
DescriptionRetrotransposon protein
Genome locationchr01:13147371..13147691
RNA-Seq ExpressionMELO3C013181
SyntenyMELO3C013181
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsIPR024752 - Myb/SANT-like domain


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0035775.1 retrotransposon protein [Cucumis melo var. makuwa]9.0e-3466.04Show/hide
Query:  MASSSWASNHLWAKEEESTLVEWLVELVSTSGWKSDNGTFRPGYLAHLQRMMAEKVLGCNIKGSQTIDCQIKTLKRTFQDIAEICRASYSGFGWNNEVKC
        M++S+ A  H+W +EEE TLVE L+ELVS  GWKSDNGTFRPGYLA L RMMAEK+LGC ++ +  IDC+IKTLK+TFQ IAE+   + SGFGWN+E KC
Subjt:  MASSSWASNHLWAKEEESTLVEWLVELVSTSGWKSDNGTFRPGYLAHLQRMMAEKVLGCNIKGSQTIDCQIKTLKRTFQDIAEICRASYSGFGWNNEVKC

Query:  IIAEKE
        I+AEKE
Subjt:  IIAEKE
KAA0049911.1 retrotransposon protein [Cucumis melo var. makuwa]1.2e-3366.98Show/hide
Query:  MASSSWASNHLWAKEEESTLVEWLVELVSTSGWKSDNGTFRPGYLAHLQRMMAEKVLGCNIKGSQTIDCQIKTLKRTFQDIAEICRASYSGFGWNNEVKC
        M++S+ A  H+W KEEE TLVE+L+ELVS  GWKSDNGTFRPGYL  L RMMAEK+ GC ++ +  IDC+IKTLKRTFQ IAE+   + SGFGWN+E KC
Subjt:  MASSSWASNHLWAKEEESTLVEWLVELVSTSGWKSDNGTFRPGYLAHLQRMMAEKVLGCNIKGSQTIDCQIKTLKRTFQDIAEICRASYSGFGWNNEVKC

Query:  IIAEKE
        IIAEKE
Subjt:  IIAEKE
KAA0065929.1 retrotransposon protein [Cucumis melo var. makuwa]1.4e-3468.87Show/hide
Query:  MASSSWASNHLWAKEEESTLVEWLVELVSTSGWKSDNGTFRPGYLAHLQRMMAEKVLGCNIKGSQTIDCQIKTLKRTFQDIAEICRASYSGFGWNNEVKC
        M++S+ A  H+W KEEE TLVE L+ELVS  GWKSDNGTFRPGYLA L RMMAEK+ GC ++ +  IDC+IKTLKRTFQ IAE+   + SGFGWN+EVKC
Subjt:  MASSSWASNHLWAKEEESTLVEWLVELVSTSGWKSDNGTFRPGYLAHLQRMMAEKVLGCNIKGSQTIDCQIKTLKRTFQDIAEICRASYSGFGWNNEVKC

Query:  IIAEKE
        IIAEKE
Subjt:  IIAEKE
KAA0066208.1 retrotransposon protein [Cucumis melo var. makuwa]4.0e-3467.92Show/hide
Query:  MASSSWASNHLWAKEEESTLVEWLVELVSTSGWKSDNGTFRPGYLAHLQRMMAEKVLGCNIKGSQTIDCQIKTLKRTFQDIAEICRASYSGFGWNNEVKC
        M++S+ AS H+W +EEE TLVE L+ELVS  GWKSDNGTFRPGYLA L RMMAEK+ GC ++ +  IDC+IKTLKRTFQ IAE+   + SGFGWN+E KC
Subjt:  MASSSWASNHLWAKEEESTLVEWLVELVSTSGWKSDNGTFRPGYLAHLQRMMAEKVLGCNIKGSQTIDCQIKTLKRTFQDIAEICRASYSGFGWNNEVKC

Query:  IIAEKE
        IIAEKE
Subjt:  IIAEKE
TYK07652.1 retrotransposon protein [Cucumis melo var. makuwa]1.2e-3366.98Show/hide
Query:  MASSSWASNHLWAKEEESTLVEWLVELVSTSGWKSDNGTFRPGYLAHLQRMMAEKVLGCNIKGSQTIDCQIKTLKRTFQDIAEICRASYSGFGWNNEVKC
        M++S+ A  H+W KEEE TLVE+L+ELVS  GWKSDNGTFRPGYL  L RMMAEK+ GC ++ +  IDC+IKTLKRTFQ IAE+   + SGFGWN+E KC
Subjt:  MASSSWASNHLWAKEEESTLVEWLVELVSTSGWKSDNGTFRPGYLAHLQRMMAEKVLGCNIKGSQTIDCQIKTLKRTFQDIAEICRASYSGFGWNNEVKC

Query:  IIAEKE
        IIAEKE
Subjt:  IIAEKE
TrEMBL top hitse value%identityAlignment
A0A5A7T2T9 Retrotransposon protein4.4e-3466.04Show/hide
Query:  MASSSWASNHLWAKEEESTLVEWLVELVSTSGWKSDNGTFRPGYLAHLQRMMAEKVLGCNIKGSQTIDCQIKTLKRTFQDIAEICRASYSGFGWNNEVKC
        M++S+ A  H+W +EEE TLVE L+ELVS  GWKSDNGTFRPGYLA L RMMAEK+LGC ++ +  IDC+IKTLK+TFQ IAE+   + SGFGWN+E KC
Subjt:  MASSSWASNHLWAKEEESTLVEWLVELVSTSGWKSDNGTFRPGYLAHLQRMMAEKVLGCNIKGSQTIDCQIKTLKRTFQDIAEICRASYSGFGWNNEVKC

Query:  IIAEKE
        I+AEKE
Subjt:  IIAEKE
A0A5A7U8I3 Retrotransposon protein5.7e-3466.98Show/hide
Query:  MASSSWASNHLWAKEEESTLVEWLVELVSTSGWKSDNGTFRPGYLAHLQRMMAEKVLGCNIKGSQTIDCQIKTLKRTFQDIAEICRASYSGFGWNNEVKC
        M++S+ A  H+W KEEE TLVE+L+ELVS  GWKSDNGTFRPGYL  L RMMAEK+ GC ++ +  IDC+IKTLKRTFQ IAE+   + SGFGWN+E KC
Subjt:  MASSSWASNHLWAKEEESTLVEWLVELVSTSGWKSDNGTFRPGYLAHLQRMMAEKVLGCNIKGSQTIDCQIKTLKRTFQDIAEICRASYSGFGWNNEVKC

Query:  IIAEKE
        IIAEKE
Subjt:  IIAEKE
A0A5A7VES2 Retrotransposon protein2.0e-3467.92Show/hide
Query:  MASSSWASNHLWAKEEESTLVEWLVELVSTSGWKSDNGTFRPGYLAHLQRMMAEKVLGCNIKGSQTIDCQIKTLKRTFQDIAEICRASYSGFGWNNEVKC
        M++S+ AS H+W +EEE TLVE L+ELVS  GWKSDNGTFRPGYLA L RMMAEK+ GC ++ +  IDC+IKTLKRTFQ IAE+   + SGFGWN+E KC
Subjt:  MASSSWASNHLWAKEEESTLVEWLVELVSTSGWKSDNGTFRPGYLAHLQRMMAEKVLGCNIKGSQTIDCQIKTLKRTFQDIAEICRASYSGFGWNNEVKC

Query:  IIAEKE
        IIAEKE
Subjt:  IIAEKE
A0A5A7VKT2 Retrotransposon protein6.7e-3568.87Show/hide
Query:  MASSSWASNHLWAKEEESTLVEWLVELVSTSGWKSDNGTFRPGYLAHLQRMMAEKVLGCNIKGSQTIDCQIKTLKRTFQDIAEICRASYSGFGWNNEVKC
        M++S+ A  H+W KEEE TLVE L+ELVS  GWKSDNGTFRPGYLA L RMMAEK+ GC ++ +  IDC+IKTLKRTFQ IAE+   + SGFGWN+EVKC
Subjt:  MASSSWASNHLWAKEEESTLVEWLVELVSTSGWKSDNGTFRPGYLAHLQRMMAEKVLGCNIKGSQTIDCQIKTLKRTFQDIAEICRASYSGFGWNNEVKC

Query:  IIAEKE
        IIAEKE
Subjt:  IIAEKE
A0A5D3C8P0 Retrotransposon protein5.7e-3466.98Show/hide
Query:  MASSSWASNHLWAKEEESTLVEWLVELVSTSGWKSDNGTFRPGYLAHLQRMMAEKVLGCNIKGSQTIDCQIKTLKRTFQDIAEICRASYSGFGWNNEVKC
        M++S+ A  H+W KEEE TLVE+L+ELVS  GWKSDNGTFRPGYL  L RMMAEK+ GC ++ +  IDC+IKTLKRTFQ IAE+   + SGFGWN+E KC
Subjt:  MASSSWASNHLWAKEEESTLVEWLVELVSTSGWKSDNGTFRPGYLAHLQRMMAEKVLGCNIKGSQTIDCQIKTLKRTFQDIAEICRASYSGFGWNNEVKC

Query:  IIAEKE
        IIAEKE
Subjt:  IIAEKE
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCAAGTTCATCATGGGCCTCTAATCACTTGTGGGCAAAAGAGGAGGAGTCCACCCTAGTTGAGTGGTTGGTAGAGTTGGTCTCCACCAGTGGCTGGAAGTCGGACAA
TGGGACCTTTAGACCTGGGTACCTGGCACATCTCCAGAGAATGATGGCGGAAAAGGTACTAGGATGTAACATCAAAGGTTCCCAGACTATTGATTGTCAGATAAAGACCC
TGAAGAGAACGTTTCAAGACATAGCAGAAATATGCAGGGCATCTTACAGTGGGTTTGGCTGGAACAATGAAGTTAAGTGCATCATCGCTGAGAAGGAATAA
mRNA sequenceShow/hide mRNA sequence
ATGGCAAGTTCATCATGGGCCTCTAATCACTTGTGGGCAAAAGAGGAGGAGTCCACCCTAGTTGAGTGGTTGGTAGAGTTGGTCTCCACCAGTGGCTGGAAGTCGGACAA
TGGGACCTTTAGACCTGGGTACCTGGCACATCTCCAGAGAATGATGGCGGAAAAGGTACTAGGATGTAACATCAAAGGTTCCCAGACTATTGATTGTCAGATAAAGACCC
TGAAGAGAACGTTTCAAGACATAGCAGAAATATGCAGGGCATCTTACAGTGGGTTTGGCTGGAACAATGAAGTTAAGTGCATCATCGCTGAGAAGGAATAA
Protein sequenceShow/hide protein sequence
MASSSWASNHLWAKEEESTLVEWLVELVSTSGWKSDNGTFRPGYLAHLQRMMAEKVLGCNIKGSQTIDCQIKTLKRTFQDIAEICRASYSGFGWNNEVKCIIAEKE