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MELO3C013637 (gene) of Melon (DHL92) v4 genome

Gene IDMELO3C013637
OrganismCucumis melo DHL92 (Melon (DHL92) v4)
DescriptionProtein ROOT HAIR DEFECTIVE 3 homolog
Genome locationchr11:18632044..18633261
RNA-Seq ExpressionMELO3C013637
SyntenyMELO3C013637
Gene Ontology termsGO:0016320 - endoplasmic reticulum membrane fusion (biological process)
GO:0005789 - endoplasmic reticulum membrane (cellular component)
GO:0016021 - integral component of membrane (cellular component)
GO:0003924 - GTPase activity (molecular function)
GO:0005525 - GTP binding (molecular function)
InterPro domainsIPR008803 - RHD3/Sey1
IPR027417 - P-loop containing nucleoside triphosphate hydrolase
IPR030386 - GB1/RHD3-type guanine nucleotide-binding (G) domain


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG5000672.1 hypothetical protein JHK87_021744 [Glycine soja]1.8e-2693.55Show/hide
Query:  MGPQSSGKSTLLNNMFGTNFREIDAFKGRSQTTKGIWLARCADIEPCTLVMNLEGTDGRERG
        MGPQSSGKSTLLNN+FGTNFRE+DAFKGRSQTTKGIW+ARCADIEPCTLVM+LEGTDGRERG
Subjt:  MGPQSSGKSTLLNNMFGTNFREIDAFKGRSQTTKGIWLARCADIEPCTLVMNLEGTDGRERG

KAG5016149.1 hypothetical protein JHK85_022285 [Glycine max]1.8e-2693.55Show/hide
Query:  MGPQSSGKSTLLNNMFGTNFREIDAFKGRSQTTKGIWLARCADIEPCTLVMNLEGTDGRERG
        MGPQSSGKSTLLNN+FGTNFRE+DAFKGRSQTTKGIW+ARCADIEPCTLVM+LEGTDGRERG
Subjt:  MGPQSSGKSTLLNNMFGTNFREIDAFKGRSQTTKGIWLARCADIEPCTLVMNLEGTDGRERG

KAG5025927.1 hypothetical protein JHK86_021841 [Glycine max]1.8e-2693.55Show/hide
Query:  MGPQSSGKSTLLNNMFGTNFREIDAFKGRSQTTKGIWLARCADIEPCTLVMNLEGTDGRERG
        MGPQSSGKSTLLNN+FGTNFRE+DAFKGRSQTTKGIW+ARCADIEPCTLVM+LEGTDGRERG
Subjt:  MGPQSSGKSTLLNNMFGTNFREIDAFKGRSQTTKGIWLARCADIEPCTLVMNLEGTDGRERG

KHN11286.1 Protein ROOT HAIR DEFECTIVE 3 like 1 [Glycine soja]1.8e-2693.55Show/hide
Query:  MGPQSSGKSTLLNNMFGTNFREIDAFKGRSQTTKGIWLARCADIEPCTLVMNLEGTDGRERG
        MGPQSSGKSTLLNN+FGTNFRE+DAFKGRSQTTKGIW+ARCADIEPCTLVM+LEGTDGRERG
Subjt:  MGPQSSGKSTLLNNMFGTNFREIDAFKGRSQTTKGIWLARCADIEPCTLVMNLEGTDGRERG

XP_003531616.1 protein ROOT HAIR DEFECTIVE 3 homolog 1 [Glycine max]1.8e-2693.55Show/hide
Query:  MGPQSSGKSTLLNNMFGTNFREIDAFKGRSQTTKGIWLARCADIEPCTLVMNLEGTDGRERG
        MGPQSSGKSTLLNN+FGTNFRE+DAFKGRSQTTKGIW+ARCADIEPCTLVM+LEGTDGRERG
Subjt:  MGPQSSGKSTLLNNMFGTNFREIDAFKGRSQTTKGIWLARCADIEPCTLVMNLEGTDGRERG

TrEMBL top hitse value%identityAlignment
A0A1U8AA95 Protein ROOT HAIR DEFECTIVE 3 homolog1.1e-2693.55Show/hide
Query:  MGPQSSGKSTLLNNMFGTNFREIDAFKGRSQTTKGIWLARCADIEPCTLVMNLEGTDGRERG
        MGPQSSGKSTLLNN+FGTNFRE+DAF+GRSQTTKGIWLARCADIEPCTLVM+LEGTDGRERG
Subjt:  MGPQSSGKSTLLNNMFGTNFREIDAFKGRSQTTKGIWLARCADIEPCTLVMNLEGTDGRERG

A0A445JH49 Protein ROOT HAIR DEFECTIVE 3 homolog8.6e-2793.55Show/hide
Query:  MGPQSSGKSTLLNNMFGTNFREIDAFKGRSQTTKGIWLARCADIEPCTLVMNLEGTDGRERG
        MGPQSSGKSTLLNN+FGTNFRE+DAFKGRSQTTKGIW+ARCADIEPCTLVM+LEGTDGRERG
Subjt:  MGPQSSGKSTLLNNMFGTNFREIDAFKGRSQTTKGIWLARCADIEPCTLVMNLEGTDGRERG

A0A445JH51 Protein ROOT HAIR DEFECTIVE 3 homolog8.6e-2793.55Show/hide
Query:  MGPQSSGKSTLLNNMFGTNFREIDAFKGRSQTTKGIWLARCADIEPCTLVMNLEGTDGRERG
        MGPQSSGKSTLLNN+FGTNFRE+DAFKGRSQTTKGIW+ARCADIEPCTLVM+LEGTDGRERG
Subjt:  MGPQSSGKSTLLNNMFGTNFREIDAFKGRSQTTKGIWLARCADIEPCTLVMNLEGTDGRERG

A0A6J1D092 Protein ROOT HAIR DEFECTIVE 3 homolog3.3e-2693.55Show/hide
Query:  MGPQSSGKSTLLNNMFGTNFREIDAFKGRSQTTKGIWLARCADIEPCTLVMNLEGTDGRERG
        MGPQSSGKSTLLNN+FGTNFRE+DAFKGRSQTTKGIWLARCA IEPCTLVM+LEGTDGRERG
Subjt:  MGPQSSGKSTLLNNMFGTNFREIDAFKGRSQTTKGIWLARCADIEPCTLVMNLEGTDGRERG

I1KUU5 Protein ROOT HAIR DEFECTIVE 3 homolog8.6e-2793.55Show/hide
Query:  MGPQSSGKSTLLNNMFGTNFREIDAFKGRSQTTKGIWLARCADIEPCTLVMNLEGTDGRERG
        MGPQSSGKSTLLNN+FGTNFRE+DAFKGRSQTTKGIW+ARCADIEPCTLVM+LEGTDGRERG
Subjt:  MGPQSSGKSTLLNNMFGTNFREIDAFKGRSQTTKGIWLARCADIEPCTLVMNLEGTDGRERG

SwissProt top hitse value%identityAlignment
P93042 Protein ROOT HAIR DEFECTIVE 32.8e-2787.1Show/hide
Query:  MGPQSSGKSTLLNNMFGTNFREIDAFKGRSQTTKGIWLARCADIEPCTLVMNLEGTDGRERG
        MGPQSSGKSTLLN++FGTNFRE+DAF+GRSQTTKGIW+ARCA IEPCT+VM+LEGTDGRERG
Subjt:  MGPQSSGKSTLLNNMFGTNFREIDAFKGRSQTTKGIWLARCADIEPCTLVMNLEGTDGRERG

Q0JLS6 Protein ROOT HAIR DEFECTIVE 33.5e-2583.87Show/hide
Query:  MGPQSSGKSTLLNNMFGTNFREIDAFKGRSQTTKGIWLARCADIEPCTLVMNLEGTDGRERG
        MGPQSSGKSTLLN++F TNFRE+DAFKGRSQTTKGIW+A+  +IEPCTLVM+LEGTDGRERG
Subjt:  MGPQSSGKSTLLNNMFGTNFREIDAFKGRSQTTKGIWLARCADIEPCTLVMNLEGTDGRERG

Q2QMH2 Protein ROOT HAIR DEFECTIVE 3 homolog 11.4e-2683.87Show/hide
Query:  MGPQSSGKSTLLNNMFGTNFREIDAFKGRSQTTKGIWLARCADIEPCTLVMNLEGTDGRERG
        MGPQSSGKSTLLN +FGTNFRE+DAF+GRSQTTKGIW+ARC  +EPCT+VM+LEGTDGRERG
Subjt:  MGPQSSGKSTLLNNMFGTNFREIDAFKGRSQTTKGIWLARCADIEPCTLVMNLEGTDGRERG

Q9FKE9 Protein ROOT HAIR DEFECTIVE 3 homolog 22.5e-2379.03Show/hide
Query:  MGPQSSGKSTLLNNMFGTNFREIDAFKGRSQTTKGIWLARCADIEPCTLVMNLEGTDGRERG
        MGPQSSGKSTLLN++F T+FRE+DAF GRSQTTKGIW+ARC  IEP T+ M+LEGTDGRERG
Subjt:  MGPQSSGKSTLLNNMFGTNFREIDAFKGRSQTTKGIWLARCADIEPCTLVMNLEGTDGRERG

Q9SSN0 Protein ROOT HAIR DEFECTIVE 3 homolog 11.7e-2790.32Show/hide
Query:  MGPQSSGKSTLLNNMFGTNFREIDAFKGRSQTTKGIWLARCADIEPCTLVMNLEGTDGRERG
        MGPQSSGKSTLLN++FGTNF E+DAFKGRSQTTKGIWLARCA IEPCTLVM+LEGTDGRERG
Subjt:  MGPQSSGKSTLLNNMFGTNFREIDAFKGRSQTTKGIWLARCADIEPCTLVMNLEGTDGRERG

Arabidopsis top hitse value%identityAlignment
AT1G72960.1 Root hair defective 3 GTP-binding protein (RHD3)1.2e-2890.32Show/hide
Query:  MGPQSSGKSTLLNNMFGTNFREIDAFKGRSQTTKGIWLARCADIEPCTLVMNLEGTDGRERG
        MGPQSSGKSTLLN++FGTNF E+DAFKGRSQTTKGIWLARCA IEPCTLVM+LEGTDGRERG
Subjt:  MGPQSSGKSTLLNNMFGTNFREIDAFKGRSQTTKGIWLARCADIEPCTLVMNLEGTDGRERG

AT3G13870.1 Root hair defective 3 GTP-binding protein (RHD3)2.0e-2887.1Show/hide
Query:  MGPQSSGKSTLLNNMFGTNFREIDAFKGRSQTTKGIWLARCADIEPCTLVMNLEGTDGRERG
        MGPQSSGKSTLLN++FGTNFRE+DAF+GRSQTTKGIW+ARCA IEPCT+VM+LEGTDGRERG
Subjt:  MGPQSSGKSTLLNNMFGTNFREIDAFKGRSQTTKGIWLARCADIEPCTLVMNLEGTDGRERG

AT3G13870.2 Root hair defective 3 GTP-binding protein (RHD3)4.1e-1383.33Show/hide
Query:  KGRSQTTKGIWLARCADIEPCTLVMNLEGTDGRERG
        +G SQTTKGIW+ARCA IEPCT+VM+LEGTDGRERG
Subjt:  KGRSQTTKGIWLARCADIEPCTLVMNLEGTDGRERG

AT5G45160.1 Root hair defective 3 GTP-binding protein (RHD3)1.8e-2479.03Show/hide
Query:  MGPQSSGKSTLLNNMFGTNFREIDAFKGRSQTTKGIWLARCADIEPCTLVMNLEGTDGRERG
        MGPQSSGKSTLLN++F T+FRE+DAF GRSQTTKGIW+ARC  IEP T+ M+LEGTDGRERG
Subjt:  MGPQSSGKSTLLNNMFGTNFREIDAFKGRSQTTKGIWLARCADIEPCTLVMNLEGTDGRERG


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGCCCTCAAAGTAGTGGGAAGAGTACACTACTAAATAATATGTTTGGAACCAACTTCAGAGAGATAGATGCTTTTAAAGGGAGGTCGCAAACAACTAAAGGTATATG
GTTGGCTAGATGCGCCGACATTGAGCCTTGTACACTTGTGATGAATTTGGAAGGAACTGATGGAAGAGAGCGAGGGAGGACGACACTGCATTTGAGAAGCAAAGTGCCCT
CTTTGTGCTTGCCGTATGGTGTCACGATATTGGCCGTGAGCAGGCTGCAAATAAGCCTCTCCTCAAAACTGTATTTCAGGTATTCCCTTTAA
mRNA sequenceShow/hide mRNA sequence
ATGGGCCCTCAAAGTAGTGGGAAGAGTACACTACTAAATAATATGTTTGGAACCAACTTCAGAGAGATAGATGCTTTTAAAGGGAGGTCGCAAACAACTAAAGGTATATG
GTTGGCTAGATGCGCCGACATTGAGCCTTGTACACTTGTGATGAATTTGGAAGGAACTGATGGAAGAGAGCGAGGGAGGACGACACTGCATTTGAGAAGCAAAGTGCCCT
CTTTGTGCTTGCCGTATGGTGTCACGATATTGGCCGTGAGCAGGCTGCAAATAAGCCTCTCCTCAAAACTGTATTTCAGGTATTCCCTTTAATCTGGTTGGGGGACATGG
TGTATCTTTTATAG
Protein sequenceShow/hide protein sequence
MGPQSSGKSTLLNNMFGTNFREIDAFKGRSQTTKGIWLARCADIEPCTLVMNLEGTDGRERGRTTLHLRSKVPSLCLPYGVTILAVSRLQISLSSKLYFRYSL