; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

MELO3C013672 (gene) of Melon (DHL92) v4 genome

Gene IDMELO3C013672
OrganismCucumis melo DHL92 (Melon (DHL92) v4)
DescriptionDNA repair protein RAD51 homolog 4
Genome locationchr11:19421727..19425651
RNA-Seq ExpressionMELO3C013672
SyntenyMELO3C013672
Gene Ontology termsGO:0006281 - DNA repair (biological process)
GO:0016444 - somatic cell DNA recombination (biological process)
GO:1900426 - positive regulation of defense response to bacterium (biological process)
GO:0003677 - DNA binding (molecular function)
GO:0005524 - ATP binding (molecular function)
GO:0008094 - DNA-dependent ATPase activity (molecular function)
InterPro domainsIPR003593 - AAA+ ATPase domain
IPR013632 - DNA recombination and repair protein Rad51-like, C-terminal
IPR020588 - DNA recombination and repair protein RecA-like, ATP-binding domain
IPR027417 - P-loop containing nucleoside triphosphate hydrolase


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0061956.1 DNA repair protein RAD51-like protein 4 isoform X1 [Cucumis melo var. makuwa]2.7e-15080.21Show/hide
Query:  MAPLKFLEELYPFIDSNFLTFCASHGIFTVEDFLIHDLYVLAAFAEQQPASEKLK---------------------------QGITQILSIIDVTERQPW
        MAPLKFLEELYPFIDSNFLTF        +EDFLIHDLYVLAAFAEQQPASEKLK                           QGITQILSIIDVTERQPW
Subjt:  MAPLKFLEELYPFIDSNFLTFCASHGIFTVEDFLIHDLYVLAAFAEQQPASEKLK---------------------------QGITQILSIIDVTERQPW

Query:  LNGLELLEDARENKHILSIGFE-----------------------RVDVLLGGGLREGQLTEIVGPSSSGKTQVCLRAASNVAKNYNAEVFYVDTGNSFS
        LNGLELLEDARENKHILSIGFE                       RVDVLLGGGLREGQLTEIVGPSSSGKTQVCLRAASNVAKNYNAEVFYVDTGNSFS
Subjt:  LNGLELLEDARENKHILSIGFE-----------------------RVDVLLGGGLREGQLTEIVGPSSSGKTQVCLRAASNVAKNYNAEVFYVDTGNSFS

Query:  PQRISGFVNWKPGTALDW-------QVMSSISCHSVFDIFALFDVLHRLEFNLRSQVHSNIMHLRVQFLIIDSISSLITPILGGSSSQGHALMISAGTLL
        PQRISGFVNWKPGTALDW       QVMSSISCHSVFDIFALFDVLHRLEFNLRSQ        RVQFLIIDSISSLITPILGGSSSQGHALMISAGTLL
Subjt:  PQRISGFVNWKPGTALDW-------QVMSSISCHSVFDIFALFDVLHRLEFNLRSQVHSNIMHLRVQFLIIDSISSLITPILGGSSSQGHALMISAGTLL

Query:  KKIAHEHNIAVLVTNHTVGGDRGTSKPALGESWKSVPHVRLQLSRDAGSNVYQASILKHSSMASGTAARFVMYE
        KKIAHEHNIAVLVTNHTVGGDRGTSKPALGESWKSVPHVRLQLSRDAGSNVYQASILKHSSMASGTAARFVMYE
Subjt:  KKIAHEHNIAVLVTNHTVGGDRGTSKPALGESWKSVPHVRLQLSRDAGSNVYQASILKHSSMASGTAARFVMYE

XP_008448360.1 PREDICTED: DNA repair protein RAD51 homolog 4 isoform X1 [Cucumis melo]3.1e-16288.03Show/hide
Query:  MAPLKFLEELYPFIDSNFLTFCASHGIFTVEDFLIHDLYVLAAFAEQQPASEKLK---------------------------QGITQILSIIDVTERQPW
        MAPLKFLEELYPFIDSNFLTFCASHGIFTVEDFLIHDLYVLAAFAEQQPASEKLK                           QGITQILSIIDVTERQPW
Subjt:  MAPLKFLEELYPFIDSNFLTFCASHGIFTVEDFLIHDLYVLAAFAEQQPASEKLK---------------------------QGITQILSIIDVTERQPW

Query:  LNGLELLEDARENKHILSIGFERVDVLLGGGLREGQLTEIVGPSSSGKTQVCLRAASNVAKNYNAEVFYVDTGNSFSPQRISGFVNWKPGTALDW-----
        LNGLELLEDARENKHILSIGFERVDVLLGGGLREGQLTEIVGPSSSGKTQVCLRAASNVAKNYNAEVFYVDTGNSFSPQRISGFVNWKPGTALDW     
Subjt:  LNGLELLEDARENKHILSIGFERVDVLLGGGLREGQLTEIVGPSSSGKTQVCLRAASNVAKNYNAEVFYVDTGNSFSPQRISGFVNWKPGTALDW-----

Query:  --QVMSSISCHSVFDIFALFDVLHRLEFNLRSQVHSNIMHLRVQFLIIDSISSLITPILGGSSSQGHALMISAGTLLKKIAHEHNIAVLVTNHTVGGDRG
          QVMSSISCHSVFDIFALFDVLHRLEFNLRSQ        RVQFLIIDSISSLITPILGGSSSQGHALMISAGTLLKKIAHEHNIAVLVTNHTVGGDRG
Subjt:  --QVMSSISCHSVFDIFALFDVLHRLEFNLRSQVHSNIMHLRVQFLIIDSISSLITPILGGSSSQGHALMISAGTLLKKIAHEHNIAVLVTNHTVGGDRG

Query:  TSKPALGESWKSVPHVRLQLSRDAGSNVYQASILKHSSMASGTAARFVMYE
        TSKPALGESWKSVPHVRLQLSRDAGSNVYQASILKHSSMASGTAARFVMYE
Subjt:  TSKPALGESWKSVPHVRLQLSRDAGSNVYQASILKHSSMASGTAARFVMYE

XP_008448361.1 PREDICTED: DNA repair protein RAD51 homolog 4 isoform X2 [Cucumis melo]1.2e-16695.37Show/hide
Query:  MAPLKFLEELYPFIDSNFLTFCASHGIFTVEDFLIHDLYVLAAFAEQQPASEKLKQGITQILSIIDVTERQPWLNGLELLEDARENKHILSIGFERVDVL
        MAPLKFLEELYPFIDSNFLTFCASHGIFTVEDFLIHDLYVLAAFAEQQPASEKLKQGITQILSIIDVTERQPWLNGLELLEDARENKHILSIGFERVDVL
Subjt:  MAPLKFLEELYPFIDSNFLTFCASHGIFTVEDFLIHDLYVLAAFAEQQPASEKLKQGITQILSIIDVTERQPWLNGLELLEDARENKHILSIGFERVDVL

Query:  LGGGLREGQLTEIVGPSSSGKTQVCLRAASNVAKNYNAEVFYVDTGNSFSPQRISGFVNWKPGTALDW-------QVMSSISCHSVFDIFALFDVLHRLE
        LGGGLREGQLTEIVGPSSSGKTQVCLRAASNVAKNYNAEVFYVDTGNSFSPQRISGFVNWKPGTALDW       QVMSSISCHSVFDIFALFDVLHRLE
Subjt:  LGGGLREGQLTEIVGPSSSGKTQVCLRAASNVAKNYNAEVFYVDTGNSFSPQRISGFVNWKPGTALDW-------QVMSSISCHSVFDIFALFDVLHRLE

Query:  FNLRSQVHSNIMHLRVQFLIIDSISSLITPILGGSSSQGHALMISAGTLLKKIAHEHNIAVLVTNHTVGGDRGTSKPALGESWKSVPHVRLQLSRDAGSN
        FNLRSQ        RVQFLIIDSISSLITPILGGSSSQGHALMISAGTLLKKIAHEHNIAVLVTNHTVGGDRGTSKPALGESWKSVPHVRLQLSRDAGSN
Subjt:  FNLRSQVHSNIMHLRVQFLIIDSISSLITPILGGSSSQGHALMISAGTLLKKIAHEHNIAVLVTNHTVGGDRGTSKPALGESWKSVPHVRLQLSRDAGSN

Query:  VYQASILKHSSMASGTAARFVMYE
        VYQASILKHSSMASGTAARFVMYE
Subjt:  VYQASILKHSSMASGTAARFVMYE

XP_031743457.1 DNA repair protein RAD51 homolog 4 isoform X2 [Cucumis sativus]4.4e-15385.34Show/hide
Query:  MAPLKFLEELYPFIDSNFLTFCASHGIFTVEDFLIHDLYVLAAFAEQQPASEKLKQGITQILSIIDVTERQPWLNGLELLEDARENKHILSIGFERVDVL
        MAPLK LEEL PFIDSNFLTFCASHGIFTVEDFLI DLYVLAAFAEQQPASEKLKQGITQILSIID TERQPW+NGLELLEDARENK+ILSIGFE VDVL
Subjt:  MAPLKFLEELYPFIDSNFLTFCASHGIFTVEDFLIHDLYVLAAFAEQQPASEKLKQGITQILSIIDVTERQPWLNGLELLEDARENKHILSIGFERVDVL

Query:  LGGGLREGQLTEIVGPSSSGKTQVCLRAASNVAKNYNAEVFYVDTGNSFSPQRISGFVNWKPGTALDW------------------------QVMSSISC
        LGGGLREGQLTEIVGPSSSGKTQVCLRAASNVAKNY AEVFY+DTGNSFSPQRISGFVNWKPGTALDW                        +VM+SISC
Subjt:  LGGGLREGQLTEIVGPSSSGKTQVCLRAASNVAKNYNAEVFYVDTGNSFSPQRISGFVNWKPGTALDW------------------------QVMSSISC

Query:  HSVFDIFALFDVLHRLEFNLRSQVHSNIMHLRVQFLIIDSISSLITPILGGSSSQGHALMISAGTLLKKIAHEHNIAVLVTNHTVGGDRGTSKPALGESW
        HSVF+IFALFDVLH+LEFNLRSQ        RVQ LIIDSISSLITPILGGSSSQGHALMISAGTLLKKIAHEHNIAVLVTNHTVGGDRGTSKPALGESW
Subjt:  HSVFDIFALFDVLHRLEFNLRSQVHSNIMHLRVQFLIIDSISSLITPILGGSSSQGHALMISAGTLLKKIAHEHNIAVLVTNHTVGGDRGTSKPALGESW

Query:  KSVPHVRLQLSRDAGSNVYQASILKHSSMASGTAARFVMYE
        KSVPHVRLQLSRDAGSNV QASILKHSSMASG  ARFV+YE
Subjt:  KSVPHVRLQLSRDAGSNVYQASILKHSSMASGTAARFVMYE

XP_031743458.1 DNA repair protein RAD51 homolog 4 isoform X3 [Cucumis sativus]8.4e-15285.34Show/hide
Query:  MAPLKFLEELYPFIDSNFLTFCASHGIFTVEDFLIHDLYVLAAFAEQQPASEKLKQGITQILSIIDVTERQPWLNGLELLEDARENKHILSIGFERVDVL
        MAPLK LEEL PFIDSNFLTFCASHGIFTVEDFLI DLYVLAAFAEQQPASEKLKQGITQILSIID TERQPW+NGLELLEDARENK+ILSIGFE VDVL
Subjt:  MAPLKFLEELYPFIDSNFLTFCASHGIFTVEDFLIHDLYVLAAFAEQQPASEKLKQGITQILSIIDVTERQPWLNGLELLEDARENKHILSIGFERVDVL

Query:  LGGGLREGQLTEIVGPSSSGKTQVCLRAASNVAKNYNAEVFYVDTGNSFSPQRISGFVNWKPGTALDW-------QVMSSISCHSVFDIFALFDVLHRLE
        LGGGLREGQLTEIVGPSSSGKTQVCLRAASNVAKNY AEVFY+DTGNSFSPQRISGFVNWKPGTALDW       +VM+SISCHSVF+IFALFDVLH+LE
Subjt:  LGGGLREGQLTEIVGPSSSGKTQVCLRAASNVAKNYNAEVFYVDTGNSFSPQRISGFVNWKPGTALDW-------QVMSSISCHSVFDIFALFDVLHRLE

Query:  FNLRSQVHSNIMHLRVQFLIIDSISSLITPILGGSSSQGHALMISAGTLLKKIAHEHNIAVL-----------------VTNHTVGGDRGTSKPALGESW
        FNLRSQ        RVQ LIIDSISSLITPILGGSSSQGHALMISAGTLLKKIAHEHNIAVL                 VTNHTVGGDRGTSKPALGESW
Subjt:  FNLRSQVHSNIMHLRVQFLIIDSISSLITPILGGSSSQGHALMISAGTLLKKIAHEHNIAVL-----------------VTNHTVGGDRGTSKPALGESW

Query:  KSVPHVRLQLSRDAGSNVYQASILKHSSMASGTAARFVMYE
        KSVPHVRLQLSRDAGSNV QASILKHSSMASG  ARFV+YE
Subjt:  KSVPHVRLQLSRDAGSNVYQASILKHSSMASGTAARFVMYE

TrEMBL top hitse value%identityAlignment
A0A0A0KCU0 RECA_2 domain-containing protein2.3e-15589.81Show/hide
Query:  MAPLKFLEELYPFIDSNFLTFCASHGIFTVEDFLIHDLYVLAAFAEQQPASEKLKQGITQILSIIDVTERQPWLNGLELLEDARENKHILSIGFERVDVL
        MAPLK LEEL PFIDSNFLTFCASHGIFTVEDFLI DLYVLAAFAEQQPASEKLKQGITQILSIID TERQPW+NGLELLEDARENK+ILSIGFE VDVL
Subjt:  MAPLKFLEELYPFIDSNFLTFCASHGIFTVEDFLIHDLYVLAAFAEQQPASEKLKQGITQILSIIDVTERQPWLNGLELLEDARENKHILSIGFERVDVL

Query:  LGGGLREGQLTEIVGPSSSGKTQVCLRAASNVAKNYNAEVFYVDTGNSFSPQRISGFVNWKPGTALDW-------QVMSSISCHSVFDIFALFDVLHRLE
        LGGGLREGQLTEIVGPSSSGKTQVCLRAASNVAKNY AEVFY+DTGNSFSPQRISGFVNWKPGTALDW       +VM+SISCHSVF+IFALFDVLH+LE
Subjt:  LGGGLREGQLTEIVGPSSSGKTQVCLRAASNVAKNYNAEVFYVDTGNSFSPQRISGFVNWKPGTALDW-------QVMSSISCHSVFDIFALFDVLHRLE

Query:  FNLRSQVHSNIMHLRVQFLIIDSISSLITPILGGSSSQGHALMISAGTLLKKIAHEHNIAVLVTNHTVGGDRGTSKPALGESWKSVPHVRLQLSRDAGSN
        FNLRSQ        RVQ LIIDSISSLITPILGGSSSQGHALMISAGTLLKKIAHEHNIAVLVTNHTVGGDRGTSKPALGESWKSVPHVRLQLSRDAGSN
Subjt:  FNLRSQVHSNIMHLRVQFLIIDSISSLITPILGGSSSQGHALMISAGTLLKKIAHEHNIAVLVTNHTVGGDRGTSKPALGESWKSVPHVRLQLSRDAGSN

Query:  VYQASILKHSSMASGTAARFVMYE
        V QASILKHSSMASG  ARFV+YE
Subjt:  VYQASILKHSSMASGTAARFVMYE

A0A1S3BIX1 DNA repair protein RAD51 homolog 4 isoform X11.5e-16288.03Show/hide
Query:  MAPLKFLEELYPFIDSNFLTFCASHGIFTVEDFLIHDLYVLAAFAEQQPASEKLK---------------------------QGITQILSIIDVTERQPW
        MAPLKFLEELYPFIDSNFLTFCASHGIFTVEDFLIHDLYVLAAFAEQQPASEKLK                           QGITQILSIIDVTERQPW
Subjt:  MAPLKFLEELYPFIDSNFLTFCASHGIFTVEDFLIHDLYVLAAFAEQQPASEKLK---------------------------QGITQILSIIDVTERQPW

Query:  LNGLELLEDARENKHILSIGFERVDVLLGGGLREGQLTEIVGPSSSGKTQVCLRAASNVAKNYNAEVFYVDTGNSFSPQRISGFVNWKPGTALDW-----
        LNGLELLEDARENKHILSIGFERVDVLLGGGLREGQLTEIVGPSSSGKTQVCLRAASNVAKNYNAEVFYVDTGNSFSPQRISGFVNWKPGTALDW     
Subjt:  LNGLELLEDARENKHILSIGFERVDVLLGGGLREGQLTEIVGPSSSGKTQVCLRAASNVAKNYNAEVFYVDTGNSFSPQRISGFVNWKPGTALDW-----

Query:  --QVMSSISCHSVFDIFALFDVLHRLEFNLRSQVHSNIMHLRVQFLIIDSISSLITPILGGSSSQGHALMISAGTLLKKIAHEHNIAVLVTNHTVGGDRG
          QVMSSISCHSVFDIFALFDVLHRLEFNLRSQ        RVQFLIIDSISSLITPILGGSSSQGHALMISAGTLLKKIAHEHNIAVLVTNHTVGGDRG
Subjt:  --QVMSSISCHSVFDIFALFDVLHRLEFNLRSQVHSNIMHLRVQFLIIDSISSLITPILGGSSSQGHALMISAGTLLKKIAHEHNIAVLVTNHTVGGDRG

Query:  TSKPALGESWKSVPHVRLQLSRDAGSNVYQASILKHSSMASGTAARFVMYE
        TSKPALGESWKSVPHVRLQLSRDAGSNVYQASILKHSSMASGTAARFVMYE
Subjt:  TSKPALGESWKSVPHVRLQLSRDAGSNVYQASILKHSSMASGTAARFVMYE

A0A1S3BJI2 DNA repair protein RAD51 homolog 4 isoform X25.8e-16795.37Show/hide
Query:  MAPLKFLEELYPFIDSNFLTFCASHGIFTVEDFLIHDLYVLAAFAEQQPASEKLKQGITQILSIIDVTERQPWLNGLELLEDARENKHILSIGFERVDVL
        MAPLKFLEELYPFIDSNFLTFCASHGIFTVEDFLIHDLYVLAAFAEQQPASEKLKQGITQILSIIDVTERQPWLNGLELLEDARENKHILSIGFERVDVL
Subjt:  MAPLKFLEELYPFIDSNFLTFCASHGIFTVEDFLIHDLYVLAAFAEQQPASEKLKQGITQILSIIDVTERQPWLNGLELLEDARENKHILSIGFERVDVL

Query:  LGGGLREGQLTEIVGPSSSGKTQVCLRAASNVAKNYNAEVFYVDTGNSFSPQRISGFVNWKPGTALDW-------QVMSSISCHSVFDIFALFDVLHRLE
        LGGGLREGQLTEIVGPSSSGKTQVCLRAASNVAKNYNAEVFYVDTGNSFSPQRISGFVNWKPGTALDW       QVMSSISCHSVFDIFALFDVLHRLE
Subjt:  LGGGLREGQLTEIVGPSSSGKTQVCLRAASNVAKNYNAEVFYVDTGNSFSPQRISGFVNWKPGTALDW-------QVMSSISCHSVFDIFALFDVLHRLE

Query:  FNLRSQVHSNIMHLRVQFLIIDSISSLITPILGGSSSQGHALMISAGTLLKKIAHEHNIAVLVTNHTVGGDRGTSKPALGESWKSVPHVRLQLSRDAGSN
        FNLRSQ        RVQFLIIDSISSLITPILGGSSSQGHALMISAGTLLKKIAHEHNIAVLVTNHTVGGDRGTSKPALGESWKSVPHVRLQLSRDAGSN
Subjt:  FNLRSQVHSNIMHLRVQFLIIDSISSLITPILGGSSSQGHALMISAGTLLKKIAHEHNIAVLVTNHTVGGDRGTSKPALGESWKSVPHVRLQLSRDAGSN

Query:  VYQASILKHSSMASGTAARFVMYE
        VYQASILKHSSMASGTAARFVMYE
Subjt:  VYQASILKHSSMASGTAARFVMYE

A0A5A7V637 DNA repair protein RAD51-like protein 4 isoform X11.3e-15080.21Show/hide
Query:  MAPLKFLEELYPFIDSNFLTFCASHGIFTVEDFLIHDLYVLAAFAEQQPASEKLK---------------------------QGITQILSIIDVTERQPW
        MAPLKFLEELYPFIDSNFLTF        +EDFLIHDLYVLAAFAEQQPASEKLK                           QGITQILSIIDVTERQPW
Subjt:  MAPLKFLEELYPFIDSNFLTFCASHGIFTVEDFLIHDLYVLAAFAEQQPASEKLK---------------------------QGITQILSIIDVTERQPW

Query:  LNGLELLEDARENKHILSIGFE-----------------------RVDVLLGGGLREGQLTEIVGPSSSGKTQVCLRAASNVAKNYNAEVFYVDTGNSFS
        LNGLELLEDARENKHILSIGFE                       RVDVLLGGGLREGQLTEIVGPSSSGKTQVCLRAASNVAKNYNAEVFYVDTGNSFS
Subjt:  LNGLELLEDARENKHILSIGFE-----------------------RVDVLLGGGLREGQLTEIVGPSSSGKTQVCLRAASNVAKNYNAEVFYVDTGNSFS

Query:  PQRISGFVNWKPGTALDW-------QVMSSISCHSVFDIFALFDVLHRLEFNLRSQVHSNIMHLRVQFLIIDSISSLITPILGGSSSQGHALMISAGTLL
        PQRISGFVNWKPGTALDW       QVMSSISCHSVFDIFALFDVLHRLEFNLRSQ        RVQFLIIDSISSLITPILGGSSSQGHALMISAGTLL
Subjt:  PQRISGFVNWKPGTALDW-------QVMSSISCHSVFDIFALFDVLHRLEFNLRSQVHSNIMHLRVQFLIIDSISSLITPILGGSSSQGHALMISAGTLL

Query:  KKIAHEHNIAVLVTNHTVGGDRGTSKPALGESWKSVPHVRLQLSRDAGSNVYQASILKHSSMASGTAARFVMYE
        KKIAHEHNIAVLVTNHTVGGDRGTSKPALGESWKSVPHVRLQLSRDAGSNVYQASILKHSSMASGTAARFVMYE
Subjt:  KKIAHEHNIAVLVTNHTVGGDRGTSKPALGESWKSVPHVRLQLSRDAGSNVYQASILKHSSMASGTAARFVMYE

A0A5D3DK64 DNA repair protein RAD51-like protein 4 isoform X14.6e-14873.71Show/hide
Query:  MAPLKFLEELYPFIDSNFLTFCASHGIFTVEDFLIHDLYVLAAFAEQQPASEKLK---------------------------QGITQILSIIDVTERQPW
        MAPLKFLEELYPFIDSNFLTF        +EDFLIHDLYVLAAFAEQQPASEKLK                           QGITQILSIIDVTERQPW
Subjt:  MAPLKFLEELYPFIDSNFLTFCASHGIFTVEDFLIHDLYVLAAFAEQQPASEKLK---------------------------QGITQILSIIDVTERQPW

Query:  LNGLELLEDARENKHILSIGFERVDVLLGGGLREGQLTEIVGPSSSGKTQVCLRAASNVAKNYNAEVFYVDTGNSFSPQRISGFVNWKPGTALDW-----
        LNGLELLEDARENKHILSIGFERVDVLLGGGLREGQLTEIVGPSSSGKTQVCLRAASNVAKNYNAEVFYVDTGNSFSPQRISGFVNWKPGTALDW     
Subjt:  LNGLELLEDARENKHILSIGFERVDVLLGGGLREGQLTEIVGPSSSGKTQVCLRAASNVAKNYNAEVFYVDTGNSFSPQRISGFVNWKPGTALDW-----

Query:  ----------------------------------------------------------QVMSSISCHSVFDIFALFDVLHRLEFNLRSQVHSNIMHLRVQ
                                                                  QVMSSISCHSVFDIFALFDVLHRLEFNLRSQ        RVQ
Subjt:  ----------------------------------------------------------QVMSSISCHSVFDIFALFDVLHRLEFNLRSQVHSNIMHLRVQ

Query:  FLIIDSISSLITPILGGSSSQGHALMISAGTLLKKIAHEHNIAVLVTNHTVGGDRGTSKPALGESWKSVPHVRLQLSRDAGSNVYQASILKHSSMASGTA
        FLIIDSISSLITPILGGSSSQGHALMISAGTLLKKIAHEHNIAVLVTNHTVGGDRGTSKPALGESWKSVPHVRLQLSRDAGSNVYQASILKHSSMASGTA
Subjt:  FLIIDSISSLITPILGGSSSQGHALMISAGTLLKKIAHEHNIAVLVTNHTVGGDRGTSKPALGESWKSVPHVRLQLSRDAGSNVYQASILKHSSMASGTA

Query:  ARFVMYE
        ARFVMYE
Subjt:  ARFVMYE

SwissProt top hitse value%identityAlignment
O55230 DNA repair protein RAD51 homolog 43.2e-2936.12Show/hide
Query:  LNGLELLEDARENKHILSIGFERVDVLLGGGLREGQLTEIVGPSSSGKTQVCLRAASNVAKNYNAEVFYVDTGNSFSPQRISGFVNWK-PGTALDWQVMS
        LNG +L E+ + +  ILS G   +D LL  GL  G++TEIVG   SGKTQVCL  A+NVA +    V YVD+    +  R+   +  +          + 
Subjt:  LNGLELLEDARENKHILSIGFERVDVLLGGGLREGQLTEIVGPSSSGKTQVCLRAASNVAKNYNAEVFYVDTGNSFSPQRISGFVNWK-PGTALDWQVMS

Query:  SISCHSVFDIFALFDVLHRLEFNLRSQVHSNIMHLRVQFLIIDSISSLITPILGGSSSQGHALMISAGTLLKKIAHEHNIAVLVTNH-TVGGDRGTSKPA
         I     FDIF + D+L  L   +  Q  ++   ++V  +I+DS+++++ P+LGG   +G ALM+     LK +A +  +AV+VTNH T   D    KPA
Subjt:  SISCHSVFDIFALFDVLHRLEFNLRSQVHSNIMHLRVQFLIIDSISSLITPILGGSSSQGHALMISAGTLLKKIAHEHNIAVLVTNH-TVGGDRGTSKPA

Query:  LGESWKSVPHVRLQLSRDAGSNVYQAS
        LG SW  VP  R+ L    G+    +S
Subjt:  LGESWKSVPHVRLQLSRDAGSNVYQAS

O75771 DNA repair protein RAD51 homolog 45.3e-3234.39Show/hide
Query:  LYPFIDSNFLTFCASHGIFTVEDFLIHDLYVLAAFAEQQPASEKLKQGITQILSIIDVTERQPWLNGLELLEDARENKHILSIGFERVDVLLGGGLREGQ
        L P +    +    SH I TV D +  D   L   A++   S K    + ++L  +      P +NG +L E+ + +  ILS G   +D LL  GL  G+
Subjt:  LYPFIDSNFLTFCASHGIFTVEDFLIHDLYVLAAFAEQQPASEKLKQGITQILSIIDVTERQPWLNGLELLEDARENKHILSIGFERVDVLLGGGLREGQ

Query:  LTEIVGPSSSGKTQVCLRAASNVAKNYNAEVFYVDTGNSFSPQRISGFVNWKPGTALDW-QVMSSISCHSVFDIFALFDVLHRLEFNLRSQVHSNIMHLR
        +TEIVG   SGKTQVCL  A+NVA      V YVD+    +  R+   +  K     +  + +  I     FDIF + DVL  L   +  QV  +   ++
Subjt:  LTEIVGPSSSGKTQVCLRAASNVAKNYNAEVFYVDTGNSFSPQRISGFVNWKPGTALDW-QVMSSISCHSVFDIFALFDVLHRLEFNLRSQVHSNIMHLR

Query:  VQFLIIDSISSLITPILGGSSSQGHALMISAGTLLKKIAHEHNIAVLVTNH-TVGGDRGTSKPALGESWKSVPHVRLQLSRDAGS
        V  +++DS++++++P+LGG   +G ALM+     LK +A +  +AV+VTNH T   D G  KPALG SW  VP  R+ L    G+
Subjt:  VQFLIIDSISSLITPILGGSSSQGHALMISAGTLLKKIAHEHNIAVLVTNH-TVGGDRGTSKPALGESWKSVPHVRLQLSRDAGS

Q1ZXF0 Probable DNA repair protein RAD51 homolog 41.8e-2731.17Show/hide
Query:  LNGLELLEDARENKHILSIGFERVDVLLGG-GLREGQLTEIVGPSSSGKTQVCLRAASNVAKNYNAEVFYVDTGNSFSPQRI-----SGFV---------
        +NG +   D +E K   S G + +D LLGG G   G++ E+VG +S GKTQ+ +  + N+++ YN+ + Y+D+ NSFSP R+     S ++         
Subjt:  LNGLELLEDARENKHILSIGFERVDVLLGG-GLREGQLTEIVGPSSSGKTQVCLRAASNVAKNYNAEVFYVDTGNSFSPQRI-----SGFV---------

Query:  -------------NWKPGTALDWQVMSSISCHSVFDIFALFDVLHRLEFNL-----RSQVHSNIMHLRVQFLIIDSISSLITPILGGSSSQGHALMISAG
                     N K       +++  I   + FD   L ++L  ++  L           N  +  ++ ++IDSI +L+ PI+GG  +QGH  M+   
Subjt:  -------------NWKPGTALDWQVMSSISCHSVFDIFALFDVLHRLEFNL-----RSQVHSNIMHLRVQFLIIDSISSLITPILGGSSSQGHALMISAG

Query:  TLLKKIAHEHNIAVLVTNHTVGGDRGTSKPALGESWKSVPHVRLQLS
         L+K IA  + I  L+TN+TVGG+   +K ALGE+W  VP+ +L ++
Subjt:  TLLKKIAHEHNIAVLVTNHTVGGDRGTSKPALGESWKSVPHVRLQLS

Q2HJ51 DNA repair protein RAD51 homolog 44.8e-3335.44Show/hide
Query:  LYPFIDSNFLTFCASHGIFTVEDFLIHDLYVLAAFAEQQPASEKLKQGITQILSIIDVTERQPWLNGLELLEDARENKHILSIGFERVDVLLGGGLREGQ
        L P +  + +    S GI TV D +  D   L   A++   S K    + ++L  +      P+ NG +L E+ + +  ILS G   +D LL  GL  G+
Subjt:  LYPFIDSNFLTFCASHGIFTVEDFLIHDLYVLAAFAEQQPASEKLKQGITQILSIIDVTERQPWLNGLELLEDARENKHILSIGFERVDVLLGGGLREGQ

Query:  LTEIVGPSSSGKTQVCLRAASNVAKNYNAEVFYVDTGNSFSPQRISGFVNWK-PGTALDWQVMSSISCHSVFDIFALFDVLHRLEFNLRSQVHSNIMHLR
        +TEIVG   SGKTQVCL  A++VA      V Y+D+    +  RI   +  + P        +  I     FDIF + DVL  L   +  QV S+   L+
Subjt:  LTEIVGPSSSGKTQVCLRAASNVAKNYNAEVFYVDTGNSFSPQRISGFVNWK-PGTALDWQVMSSISCHSVFDIFALFDVLHRLEFNLRSQVHSNIMHLR

Query:  VQFLIIDSISSLITPILGGSSSQGHALMISAGTLLKKIAHEHNIAVLVTNH-TVGGDRGTSKPALGESWKSVPHVRLQLSRDAGS
        V  +++DS+++++ P+LGG   +G ALM+     LK +A + ++AVLVTNH T   D G  KPALG SW  VP  RL L     S
Subjt:  VQFLIIDSISSLITPILGGSSSQGHALMISAGTLLKKIAHEHNIAVLVTNH-TVGGDRGTSKPALGESWKSVPHVRLQLSRDAGS

Q9LQQ2 DNA repair protein RAD51 homolog 46.1e-9758.92Show/hide
Query:  MAPLKFLEELYPFIDSNFLTFCASHGIFTVEDFLIHDLYVLAAFAEQQPASEKLKQGITQILSIIDVTERQPWLNGLELLEDARENKHILSIGFERVDVL
        MAPLK LE+  P ID+ F  FCASHGI T+EDFL+HDLY L AF+++Q  +++LK+GIT ILS+I+  + +P +NGL+LLED   NKH LS G +  D L
Subjt:  MAPLKFLEELYPFIDSNFLTFCASHGIFTVEDFLIHDLYVLAAFAEQQPASEKLKQGITQILSIIDVTERQPWLNGLELLEDARENKHILSIGFERVDVL

Query:  LGGGLREGQLTEIVGPSSSGKTQVCLRAASNVAKNYNAEVFYVDTGNSFSPQRISGFVNWKPGTALDWQVMSSISCHSVFDIFALFDVLHRLEFNLRSQV
        L GG REGQLTE+VGPSSSGKTQ C++AA++VA+N+   V Y+DTGNSFS +RI+ F+       L  +VMS I CH+V+DI+ LFD L  LE  LR Q+
Subjt:  LGGGLREGQLTEIVGPSSSGKTQVCLRAASNVAKNYNAEVFYVDTGNSFSPQRISGFVNWKPGTALDWQVMSSISCHSVFDIFALFDVLHRLEFNLRSQV

Query:  HSNIMHLRVQFLIIDSISSLITPILGGSSSQGHALMISAGTLLKKIAHEHNIAVLVTNHTV--GGDRGTSKPALGESWKSVPHVRLQLSRDAGSNVYQAS
          N+   R++ L++DSISSLITPILGGS SQG ALM++ G LLKK+AHEH+IA+LVTNHTV  GG+ G +KPALGE+WKS+PHVRL LSRD  ++    S
Subjt:  HSNIMHLRVQFLIIDSISSLITPILGGSSSQGHALMISAGTLLKKIAHEHNIAVLVTNHTV--GGDRGTSKPALGESWKSVPHVRLQLSRDAGSNVYQAS

Query:  ILKHSSMASGTAAR
        ILKH+S+ SG AA+
Subjt:  ILKHSSMASGTAAR

Arabidopsis top hitse value%identityAlignment
AT1G07745.1 homolog of RAD51 D4.3e-9858.92Show/hide
Query:  MAPLKFLEELYPFIDSNFLTFCASHGIFTVEDFLIHDLYVLAAFAEQQPASEKLKQGITQILSIIDVTERQPWLNGLELLEDARENKHILSIGFERVDVL
        MAPLK LE+  P ID+ F  FCASHGI T+EDFL+HDLY L AF+++Q  +++LK+GIT ILS+I+  + +P +NGL+LLED   NKH LS G +  D L
Subjt:  MAPLKFLEELYPFIDSNFLTFCASHGIFTVEDFLIHDLYVLAAFAEQQPASEKLKQGITQILSIIDVTERQPWLNGLELLEDARENKHILSIGFERVDVL

Query:  LGGGLREGQLTEIVGPSSSGKTQVCLRAASNVAKNYNAEVFYVDTGNSFSPQRISGFVNWKPGTALDWQVMSSISCHSVFDIFALFDVLHRLEFNLRSQV
        L GG REGQLTE+VGPSSSGKTQ C++AA++VA+N+   V Y+DTGNSFS +RI+ F+       L  +VMS I CH+V+DI+ LFD L  LE  LR Q+
Subjt:  LGGGLREGQLTEIVGPSSSGKTQVCLRAASNVAKNYNAEVFYVDTGNSFSPQRISGFVNWKPGTALDWQVMSSISCHSVFDIFALFDVLHRLEFNLRSQV

Query:  HSNIMHLRVQFLIIDSISSLITPILGGSSSQGHALMISAGTLLKKIAHEHNIAVLVTNHTV--GGDRGTSKPALGESWKSVPHVRLQLSRDAGSNVYQAS
          N+   R++ L++DSISSLITPILGGS SQG ALM++ G LLKK+AHEH+IA+LVTNHTV  GG+ G +KPALGE+WKS+PHVRL LSRD  ++    S
Subjt:  HSNIMHLRVQFLIIDSISSLITPILGGSSSQGHALMISAGTLLKKIAHEHNIAVLVTNHTV--GGDRGTSKPALGESWKSVPHVRLQLSRDAGSNVYQAS

Query:  ILKHSSMASGTAAR
        ILKH+S+ SG AA+
Subjt:  ILKHSSMASGTAAR

AT1G07745.2 homolog of RAD51 D2.0e-8758.6Show/hide
Query:  VEDFLIHDLYVLAAFAEQQPASEKLKQGITQILSIIDVTERQPWLNGLELLEDARENKHILSIGFERVDVLLGGGLREGQLTEIVGPSSSGKTQVCLRAA
        VEDFL+HDLY L AF+++Q  +++LK+GIT ILS+I+  + +P +NGL+LLED   NKH LS G +  D LL GG REGQLTE+VGPSSSGKTQ C++AA
Subjt:  VEDFLIHDLYVLAAFAEQQPASEKLKQGITQILSIIDVTERQPWLNGLELLEDARENKHILSIGFERVDVLLGGGLREGQLTEIVGPSSSGKTQVCLRAA

Query:  SNVAKNYNAEVFYVDTGNSFSPQRISGFVNWKPGTALDWQVMSSISCHSVFDIFALFDVLHRLEFNLRSQVHSNIMHLRVQFLIIDSISSLITPILGGSS
        ++VA+N+   V Y+DTGNSFS +RI+ F+       L  +VMS I CH+V+DI+ LFD L  LE  LR Q+  N+   R++ L++DSISSLITPILGGS 
Subjt:  SNVAKNYNAEVFYVDTGNSFSPQRISGFVNWKPGTALDWQVMSSISCHSVFDIFALFDVLHRLEFNLRSQVHSNIMHLRVQFLIIDSISSLITPILGGSS

Query:  SQGHALMISAGTLLKKIAHEHNIAVLVTNHTV--GGDRGTSKPALGESWKSVPHVRLQLSRDAGSNVYQASILKHSSMASGTAAR
        SQG ALM++ G LLKK+AHEH+IA+LVTNHTV  GG+ G +KPALGE+WKS+PHVRL LSRD  ++    SILKH+S+ SG AA+
Subjt:  SQGHALMISAGTLLKKIAHEHNIAVLVTNHTV--GGDRGTSKPALGESWKSVPHVRLQLSRDAGSNVYQASILKHSSMASGTAAR

AT2G28560.1 DNA repair (Rad51) family protein2.9e-0923.02Show/hide
Query:  ITQILSIIDVTERQPWLNGLELLEDARENKHI---LSIGFERVDVLLGGGLREGQLTEIVGPSSSGKTQVCLRAASNVA-----KNYNAEVFYVDTGNSF
        I   +S I      P  +   LLE   EN+H+   L    + +D  L GG+  G LTE+VGP   GK+Q C++ A + +        +  V Y+D  + F
Subjt:  ITQILSIIDVTERQPWLNGLELLEDARENKHI---LSIGFERVDVLLGGGLREGQLTEIVGPSSSGKTQVCLRAASNVA-----KNYNAEVFYVDTGNSF

Query:  SPQRI--SGFVNWKPGTALDWQVMSSISCHSVFDIFALFDVLHRLEFNLRSQVHSNIMHLRVQFLIIDSISSLITPILGGSSSQGHALMISAG---TLLK
        S +R+   G  ++     L            V    +L +    ++     ++ ++I+  +V+ L+IDS    +T +L G +  G       G   + LK
Subjt:  SPQRI--SGFVNWKPGTALDWQVMSSISCHSVFDIFALFDVLHRLEFNLRSQVHSNIMHLRVQFLIIDSISSLITPILGGSSSQGHALMISAG---TLLK

Query:  KIAHEHNIAVLVTNHTVGGDRGTSK------------------------PALGESWKSVPHVRLQLSRDAGSNVYQAS
         +A    I ++VTN     +R  +                          ALG +W     +RL L   +G  + + +
Subjt:  KIAHEHNIAVLVTNHTVGGDRGTSK------------------------PALGESWKSVPHVRLQLSRDAGSNVYQAS

AT2G28560.2 DNA repair (Rad51) family protein2.9e-0923.02Show/hide
Query:  ITQILSIIDVTERQPWLNGLELLEDARENKHI---LSIGFERVDVLLGGGLREGQLTEIVGPSSSGKTQVCLRAASNVA-----KNYNAEVFYVDTGNSF
        I   +S I      P  +   LLE   EN+H+   L    + +D  L GG+  G LTE+VGP   GK+Q C++ A + +        +  V Y+D  + F
Subjt:  ITQILSIIDVTERQPWLNGLELLEDARENKHI---LSIGFERVDVLLGGGLREGQLTEIVGPSSSGKTQVCLRAASNVA-----KNYNAEVFYVDTGNSF

Query:  SPQRI--SGFVNWKPGTALDWQVMSSISCHSVFDIFALFDVLHRLEFNLRSQVHSNIMHLRVQFLIIDSISSLITPILGGSSSQGHALMISAG---TLLK
        S +R+   G  ++     L            V    +L +    ++     ++ ++I+  +V+ L+IDS    +T +L G +  G       G   + LK
Subjt:  SPQRI--SGFVNWKPGTALDWQVMSSISCHSVFDIFALFDVLHRLEFNLRSQVHSNIMHLRVQFLIIDSISSLITPILGGSSSQGHALMISAG---TLLK

Query:  KIAHEHNIAVLVTNHTVGGDRGTSK------------------------PALGESWKSVPHVRLQLSRDAGSNVYQAS
         +A    I ++VTN     +R  +                          ALG +W     +RL L   +G  + + +
Subjt:  KIAHEHNIAVLVTNHTVGGDRGTSK------------------------PALGESWKSVPHVRLQLSRDAGSNVYQAS

AT2G28560.3 DNA repair (Rad51) family protein2.9e-0923.02Show/hide
Query:  ITQILSIIDVTERQPWLNGLELLEDARENKHI---LSIGFERVDVLLGGGLREGQLTEIVGPSSSGKTQVCLRAASNVA-----KNYNAEVFYVDTGNSF
        I   +S I      P  +   LLE   EN+H+   L    + +D  L GG+  G LTE+VGP   GK+Q C++ A + +        +  V Y+D  + F
Subjt:  ITQILSIIDVTERQPWLNGLELLEDARENKHI---LSIGFERVDVLLGGGLREGQLTEIVGPSSSGKTQVCLRAASNVA-----KNYNAEVFYVDTGNSF

Query:  SPQRI--SGFVNWKPGTALDWQVMSSISCHSVFDIFALFDVLHRLEFNLRSQVHSNIMHLRVQFLIIDSISSLITPILGGSSSQGHALMISAG---TLLK
        S +R+   G  ++     L            V    +L +    ++     ++ ++I+  +V+ L+IDS    +T +L G +  G       G   + LK
Subjt:  SPQRI--SGFVNWKPGTALDWQVMSSISCHSVFDIFALFDVLHRLEFNLRSQVHSNIMHLRVQFLIIDSISSLITPILGGSSSQGHALMISAG---TLLK

Query:  KIAHEHNIAVLVTNHTVGGDRGTSK------------------------PALGESWKSVPHVRLQLSRDAGSNVYQAS
         +A    I ++VTN     +R  +                          ALG +W     +RL L   +G  + + +
Subjt:  KIAHEHNIAVLVTNHTVGGDRGTSK------------------------PALGESWKSVPHVRLQLSRDAGSNVYQAS


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGCCATTGAAGTTTCTGGAGGAGCTTTACCCATTCATAGACTCTAATTTTCTAACCTTTTGTGCTTCACACGGCATTTTCACTGTGGAGGATTTCCTCATC
CATGATCTATACGTTTTAGCTGCTTTTGCAGAACAACAGCCTGCATCAGAGAAATTGAAGCAGGGAATTACCCAAATCCTTTCAATAATTGATGTTACTGAACGA
CAACCATGGTTGAACGGTTTGGAGCTCTTGGAAGATGCTCGAGAAAATAAGCATATTCTGTCTATTGGTTTTGAAAGGGTTGATGTTTTGCTTGGAGGTGGGCTA
CGCGAGGGACAATTGACTGAGATTGTTGGGCCCTCGTCTTCTGGTAAAACTCAGGTTTGTCTGCGAGCTGCTTCAAATGTGGCAAAGAACTACAATGCTGAGGTT
TTCTACGTGGACACAGGGAATTCCTTTTCACCCCAACGCATCTCAGGCTTTGTTAATTGGAAGCCCGGAACTGCTTTAGATTGGCAAGTAATGAGCAGTATTTCA
TGTCACTCTGTGTTTGACATTTTTGCGCTGTTCGATGTCTTGCATCGGTTGGAATTCAATTTGAGATCCCAGGTTCACAGTAACATAATGCATCTTAGAGTGCAG
TTCCTGATTATAGATTCAATTTCTTCGCTAATTACACCCATCCTCGGTGGAAGTAGTTCACAGGGACACGCTTTGATGATATCTGCTGGAACTCTACTGAAGAAA
ATAGCTCATGAACATAATATAGCTGTATTGGTAACAAATCACACTGTGGGTGGAGATAGAGGCACTTCAAAACCTGCCCTAGGAGAGAGTTGGAAGAGTGTTCCA
CACGTGAGGCTTCAGCTTTCCCGAGATGCAGGAAGCAATGTCTACCAAGCTTCAATATTAAAGCACTCGTCCATGGCATCTGGTACGGCTGCAAGATTCGTAATG
TATGAATGA
mRNA sequenceShow/hide mRNA sequence
ATGGCGCCATTGAAGTTTCTGGAGGAGCTTTACCCATTCATAGACTCTAATTTTCTAACCTTTTGTGCTTCACACGGCATTTTCACTGTGGAGGATTTCCTCATC
CATGATCTATACGTTTTAGCTGCTTTTGCAGAACAACAGCCTGCATCAGAGAAATTGAAGCAGGGAATTACCCAAATCCTTTCAATAATTGATGTTACTGAACGA
CAACCATGGTTGAACGGTTTGGAGCTCTTGGAAGATGCTCGAGAAAATAAGCATATTCTGTCTATTGGTTTTGAAAGGGTTGATGTTTTGCTTGGAGGTGGGCTA
CGCGAGGGACAATTGACTGAGATTGTTGGGCCCTCGTCTTCTGGTAAAACTCAGGTTTGTCTGCGAGCTGCTTCAAATGTGGCAAAGAACTACAATGCTGAGGTT
TTCTACGTGGACACAGGGAATTCCTTTTCACCCCAACGCATCTCAGGCTTTGTTAATTGGAAGCCCGGAACTGCTTTAGATTGGCAAGTAATGAGCAGTATTTCA
TGTCACTCTGTGTTTGACATTTTTGCGCTGTTCGATGTCTTGCATCGGTTGGAATTCAATTTGAGATCCCAGGTTCACAGTAACATAATGCATCTTAGAGTGCAG
TTCCTGATTATAGATTCAATTTCTTCGCTAATTACACCCATCCTCGGTGGAAGTAGTTCACAGGGACACGCTTTGATGATATCTGCTGGAACTCTACTGAAGAAA
ATAGCTCATGAACATAATATAGCTGTATTGGTAACAAATCACACTGTGGGTGGAGATAGAGGCACTTCAAAACCTGCCCTAGGAGAGAGTTGGAAGAGTGTTCCA
CACGTGAGGCTTCAGCTTTCCCGAGATGCAGGAAGCAATGTCTACCAAGCTTCAATATTAAAGCACTCGTCCATGGCATCTGGTACGGCTGCAAGATTCGTAATG
TATGAATGA
Protein sequenceShow/hide protein sequence
MAPLKFLEELYPFIDSNFLTFCASHGIFTVEDFLIHDLYVLAAFAEQQPASEKLKQGITQILSIIDVTERQPWLNGLELLEDARENKHILSIGFERVDVLLGGGL
REGQLTEIVGPSSSGKTQVCLRAASNVAKNYNAEVFYVDTGNSFSPQRISGFVNWKPGTALDWQVMSSISCHSVFDIFALFDVLHRLEFNLRSQVHSNIMHLRVQ
FLIIDSISSLITPILGGSSSQGHALMISAGTLLKKIAHEHNIAVLVTNHTVGGDRGTSKPALGESWKSVPHVRLQLSRDAGSNVYQASILKHSSMASGTAARFVM
YE