; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

MELO3C013682 (gene) of Melon (DHL92) v4 genome

Gene IDMELO3C013682
OrganismCucumis melo DHL92 (Melon (DHL92) v4)
DescriptionHistone H2A
Genome locationchr11:19500919..19501884
RNA-Seq ExpressionMELO3C013682
SyntenyMELO3C013682
Gene Ontology termsGO:0031507 - heterochromatin assembly (biological process)
GO:0000786 - nucleosome (cellular component)
GO:0005634 - nucleus (cellular component)
GO:0003677 - DNA binding (molecular function)
GO:0005524 - ATP binding (molecular function)
GO:0016887 - ATPase activity (molecular function)
GO:0046982 - protein heterodimerization activity (molecular function)
InterPro domainsIPR009072 - Histone-fold
IPR032458 - Histone H2A conserved site


Homology Show/hide homology
GenBank top hitse value%identityAlignment
CAD6224341.1 unnamed protein product [Miscanthus lutarioriparius]6.1e-0561.02Show/hide
Query:  QWKLAARQRKAQEEEEEAR-------RRRQFLASVKAGLQFPVGRIARYLKKGRYAQRV
        +WKL A +  A+EEEE A        R++    SVKAGLQFPVGRI RYLKKGRYAQRV
Subjt:  QWKLAARQRKAQEEEEEAR-------RRRQFLASVKAGLQFPVGRIARYLKKGRYAQRV

KAF2307261.1 hypothetical protein GH714_025866 [Hevea brasiliensis]6.7e-0465.12Show/hide
Query:  RKAQEEEEEARRRRQFLASVKAGLQFPVGRIARYLKKGRYAQR
        R+   EEEE  R++    S++AGLQFPVGRIAR+LKKGRYAQR
Subjt:  RKAQEEEEEARRRRQFLASVKAGLQFPVGRIARYLKKGRYAQR

KAF4352633.1 hypothetical protein G4B88_008802, partial [Cannabis sativa]2.3e-0461.54Show/hide
Query:  WKLAARQRKAQEEEEE--ARRRRQFLASVKAGLQFPVGRIARYLKKGRYAQR
        WKL  + R+   E EE    R++    SVKAGLQFPVGRIAR+LKKGRYAQR
Subjt:  WKLAARQRKAQEEEEE--ARRRRQFLASVKAGLQFPVGRIARYLKKGRYAQR

XP_016538629.1 PREDICTED: histone H2A.1-like [Capsicum annuum]8.8e-0462.5Show/hide
Query:  AARQRKAQEEEEEARRRRQFLASVKAGLQFPVGRIARYLKKGRYAQRV
        AA+Q K     +   R++    SVKAGLQFPVGRIAR+LKKGRYAQRV
Subjt:  AARQRKAQEEEEEARRRRQFLASVKAGLQFPVGRIARYLKKGRYAQRV

TrEMBL top hitse value%identityAlignment
A0A1U8E4B6 Histone H2A4.2e-0462.5Show/hide
Query:  AARQRKAQEEEEEARRRRQFLASVKAGLQFPVGRIARYLKKGRYAQRV
        AA+Q K     +   R++    SVKAGLQFPVGRIAR+LKKGRYAQRV
Subjt:  AARQRKAQEEEEEARRRRQFLASVKAGLQFPVGRIARYLKKGRYAQRV

A0A2G2W7T1 Histone H2A4.2e-0462.5Show/hide
Query:  AARQRKAQEEEEEARRRRQFLASVKAGLQFPVGRIARYLKKGRYAQRV
        AA+Q K     +   R++    SVKAGLQFPVGRIAR+LKKGRYAQRV
Subjt:  AARQRKAQEEEEEARRRRQFLASVKAGLQFPVGRIARYLKKGRYAQRV

A0A2G3AXI0 Histone H2A4.2e-0462.5Show/hide
Query:  AARQRKAQEEEEEARRRRQFLASVKAGLQFPVGRIARYLKKGRYAQRV
        AA+Q K     +   R++    SVKAGLQFPVGRIAR+LKKGRYAQRV
Subjt:  AARQRKAQEEEEEARRRRQFLASVKAGLQFPVGRIARYLKKGRYAQRV

A0A6A6M0N1 Uncharacterized protein3.3e-0465.12Show/hide
Query:  RKAQEEEEEARRRRQFLASVKAGLQFPVGRIARYLKKGRYAQR
        R+   EEEE  R++    S++AGLQFPVGRIAR+LKKGRYAQR
Subjt:  RKAQEEEEEARRRRQFLASVKAGLQFPVGRIARYLKKGRYAQR

A0A7J6E2I3 Histone H2A1.1e-0461.54Show/hide
Query:  WKLAARQRKAQEEEEE--ARRRRQFLASVKAGLQFPVGRIARYLKKGRYAQR
        WKL  + R+   E EE    R++    SVKAGLQFPVGRIAR+LKKGRYAQR
Subjt:  WKLAARQRKAQEEEEE--ARRRRQFLASVKAGLQFPVGRIARYLKKGRYAQR

SwissProt top hitse value%identityAlignment
A2WQG7 Probable histone H2A.55.7e-0675.76Show/hide
Query:  RRRQFLASVKAGLQFPVGRIARYLKKGRYAQRV
        R++    SVKAGLQFPVGRI RYLKKGRYAQR+
Subjt:  RRRQFLASVKAGLQFPVGRIARYLKKGRYAQRV

P02275 Histone H2A.13.3e-0678.79Show/hide
Query:  RRRQFLASVKAGLQFPVGRIARYLKKGRYAQRV
        R++    SVKAGLQFPVGRI RYLKKGRYAQRV
Subjt:  RRRQFLASVKAGLQFPVGRIARYLKKGRYAQRV

Q2HU65 Probable histone H2A.27.5e-0672.73Show/hide
Query:  RRRQFLASVKAGLQFPVGRIARYLKKGRYAQRV
        R++    S++AGLQFPVGRI RYLKKGRYAQRV
Subjt:  RRRQFLASVKAGLQFPVGRIARYLKKGRYAQRV

Q43213 Protein H2A.53.3e-0678.79Show/hide
Query:  RRRQFLASVKAGLQFPVGRIARYLKKGRYAQRV
        R++    SVKAGLQFPVGRI RYLKKGRYAQRV
Subjt:  RRRQFLASVKAGLQFPVGRIARYLKKGRYAQRV

Q94E96 Probable histone H2A.55.7e-0675.76Show/hide
Query:  RRRQFLASVKAGLQFPVGRIARYLKKGRYAQRV
        R++    SVKAGLQFPVGRI RYLKKGRYAQR+
Subjt:  RRRQFLASVKAGLQFPVGRIARYLKKGRYAQRV

Arabidopsis top hitse value%identityAlignment
AT1G51060.1 histone H2A 101.0e-0584.62Show/hide
Query:  SVKAGLQFPVGRIARYLKKGRYAQRV
        S KAGLQFPVGRIAR+LKKG+YA+RV
Subjt:  SVKAGLQFPVGRIARYLKKGRYAQRV

AT5G02560.1 histone H2A 121.0e-0566.67Show/hide
Query:  RRRQFLASVKAGLQFPVGRIARYLKKGRYAQRV
        +++    SVK+GLQFPVGRI RYLKKGRY++RV
Subjt:  RRRQFLASVKAGLQFPVGRIARYLKKGRYAQRV

AT5G02560.2 histone H2A 121.0e-0566.67Show/hide
Query:  RRRQFLASVKAGLQFPVGRIARYLKKGRYAQRV
        +++    SVK+GLQFPVGRI RYLKKGRY++RV
Subjt:  RRRQFLASVKAGLQFPVGRIARYLKKGRYAQRV

AT5G27670.1 histone H2A 72.0e-0678.12Show/hide
Query:  RRRQFLASVKAGLQFPVGRIARYLKKGRYAQR
        R++    SVKAGLQFPVGRIARYLKKGRYA R
Subjt:  RRRQFLASVKAGLQFPVGRIARYLKKGRYAQR

AT5G59870.1 histone H2A 61.3e-0565.71Show/hide
Query:  ARRRRQFLASVKAGLQFPVGRIARYLKKGRYAQRV
        A + +    S+KAGLQFPVGRI R+LKKGRYAQR+
Subjt:  ARRRRQFLASVKAGLQFPVGRIARYLKKGRYAQRV


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
CGACAGCTCACGTTCTCCCGACACATTAGCCAGTTCCTACTGCGGTATAAAATCCAAACTCTCAACGACGATCCGACTCAAACCCGTCTCTCACTCAATCACAACTCCGA
TAACTCCCCGTCGACTAAAAGCTTCATTCTCTTCAACGTAAAACACCTAATCAGTGTCCAATGGAAACTGGCGGCAAGGCAAAGAAAGGCGCAGGAGGAAGAAGAGGAGG
CGAGAAGAAGAAGGCAGTTTCTCGCCTCCGTCAAAGCCGGTCTACAGTTCCCCGTCGGCCGTATAGCTCGTTATCTGAAGAAAGGAAGATACGCTCAGCGTGTCCGGTAC
CGGCGCTCCCGTCTACTTAGCCGCAGTAATGGAGTATTTAGCCGCTGA
mRNA sequenceShow/hide mRNA sequence
CGACAGCTCACGTTCTCCCGACACATTAGCCAGTTCCTACTGCGGTATAAAATCCAAACTCTCAACGACGATCCGACTCAAACCCGTCTCTCACTCAATCACAACTCCGA
TAACTCCCCGTCGACTAAAAGCTTCATTCTCTTCAACGTAAAACACCTAATCAGTGTCCAATGGAAACTGGCGGCAAGGCAAAGAAAGGCGCAGGAGGAAGAAGAGGAGG
CGAGAAGAAGAAGGCAGTTTCTCGCCTCCGTCAAAGCCGGTCTACAGTTCCCCGTCGGCCGTATAGCTCGTTATCTGAAGAAAGGAAGATACGCTCAGCGTGTCCGGTAC
CGGCGCTCCCGTCTACTTAGCCGCAGTAATGGAGTATTTAGCCGCTGAGGTTCTCGAGTTGGCTGGAAATGCGGCTAGAGACAACAAGAAGAAACAGGATCATTCCAAGA
CACGTTCTATTGGCGATTAGGAACGACGAGGAACTTGGAAAGTTGCTCGCCGGCGTAACTATTGCTAGCGGTGGTGTTCTTCCGAATATCAATCCGGTTTTGTTGCCGAA
GAAGACAGATAAGGGTACGAAAGAACCGAAATCGCCATCAAAGGCCGGAAAATCTCCATCGAAGGCGGCTTAAAGGGTGGAATTATAGAGTTAGGGTTGGATGAATGTTG
TAATTTATGATGGTATGTTGGATTTGTTCTTCAATGGTTTTTTTTTTTTTTTTTTTTGTTTTTTTTTTTGTAAGTGTAGACGAAAGAAGAATTAGGTATTTGGGAATGCA
ATACTGTATTCGATATTTACAAGCGAGGAATCAATGAGATGACTTATCATGTTCTTCATCTTCAAGAAATTGTTTTGTTATTCATCTTC
Protein sequenceShow/hide protein sequence
RQLTFSRHISQFLLRYKIQTLNDDPTQTRLSLNHNSDNSPSTKSFILFNVKHLISVQWKLAARQRKAQEEEEEARRRRQFLASVKAGLQFPVGRIARYLKKGRYAQRVRY
RRSRLLSRSNGVFSR