; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

MELO3C014111 (gene) of Melon (DHL92) v4 genome

Gene IDMELO3C014111
OrganismCucumis melo DHL92 (Melon (DHL92) v4)
DescriptionDNA-directed RNA polymerases I and III subunit RPAC1
Genome locationchr06:34854913..34875010
RNA-Seq ExpressionMELO3C014111
SyntenyMELO3C014111
Gene Ontology termsGO:0006360 - transcription by RNA polymerase I (biological process)
GO:0006383 - transcription by RNA polymerase III (biological process)
GO:0005666 - RNA polymerase III complex (cellular component)
GO:0005736 - RNA polymerase I complex (cellular component)
GO:0001054 - RNA polymerase I activity (molecular function)
GO:0001056 - RNA polymerase III activity (molecular function)
GO:0003677 - DNA binding (molecular function)
GO:0046983 - protein dimerization activity (molecular function)
InterPro domainsIPR001514 - DNA-directed RNA polymerase, 30-40kDa subunit, conserved site
IPR011262 - DNA-directed RNA polymerase, insert domain
IPR011263 - DNA-directed RNA polymerase, RpoA/D/Rpb3-type
IPR033901 - DNA-directed RNA polymerases I and III subunit AC40
IPR036603 - RNA polymerase, RBP11-like subunit
IPR036643 - DNA-directed RNA polymerase, insert domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6596753.1 DNA-directed RNA polymerases I and III subunit RPAC1, partial [Cucurbita argyrosperma subsp. sororia]7.0e-20189.8Show/hide
Query:  MSGKDKNLHIMMTESESEQEDVGKEGIEWIMNLPDVPMKLPPHVELQRTRVECKGDAPIHTDTIQYSGAFASMGFDNSLRLDNFRNNFKIEVINLKGDDI
        MSGKDKNLH  M+ES+SEQEDVGKEGIEWIMNLPDVPMKLPPHVELQRTRVECK DAPIHTDTIQYSGA+AS+G DNSLRLD+FR NFKIEVI+LK DD+
Subjt:  MSGKDKNLHIMMTESESEQEDVGKEGIEWIMNLPDVPMKLPPHVELQRTRVECKGDAPIHTDTIQYSGAFASMGFDNSLRLDNFRNNFKIEVINLKGDDI

Query:  EFDMIGIDPALANAFRRILIAEVPTMAIEKVLFANNTSIVQDEVLAHRLGLIPIRVDPRLFKYSDKDAPNENNTIVFRLHARCERGKPRLTVKSEALTWL
        EFDMIGIDP+LANAFRRILIAEVPTMAIEKVL ANNTSIVQDEVLAHRLGLIPIRVDPRLF+YSDKD PNE NTIVFRLH RCERGKPRLT  S+ALTWL
Subjt:  EFDMIGIDPALANAFRRILIAEVPTMAIEKVLFANNTSIVQDEVLAHRLGLIPIRVDPRLFKYSDKDAPNENNTIVFRLHARCERGKPRLTVKSEALTWL

Query:  PNGSEFPLVSDKSIPNSKPQTYTSFSCSQDKLPEFSKNSIGPKDSDIILARLGPGQEIELEAHAVKGMGKTHAKWSPVATAWYRMLPEVLLLEEIEDELA
        PNGSEFPLVSDKS+ N+KP+TYTSFSCSQD LPEF+ N IGPKD DIILARL  GQEIELEAHAVKGMGKTHAKWSPVATAWYRMLPEV+LLE+IEDELA
Subjt:  PNGSEFPLVSDKSIPNSKPQTYTSFSCSQDKLPEFSKNSIGPKDSDIILARLGPGQEIELEAHAVKGMGKTHAKWSPVATAWYRMLPEVLLLEEIEDELA

Query:  EELKRKCPVNVFDIEDIA-GKKRATVARPRACTLCRECIRGDAWEKRVALRRVKDHFIFKIESTGALPPNVLFTEAVKILEDKCERLIAELS
        EELK KCPVNVFDIEDIA GKKRATVARPRACTLCRECIRG+AWEKRV+LRRVKDHFIFKIESTGALPP VLFTEAVKILEDKCERLIAELS
Subjt:  EELKRKCPVNVFDIEDIA-GKKRATVARPRACTLCRECIRGDAWEKRVALRRVKDHFIFKIESTGALPPNVLFTEAVKILEDKCERLIAELS

XP_004148257.1 DNA-directed RNA polymerases I and III subunit RPAC1 [Cucumis sativus]3.3e-20692.86Show/hide
Query:  MSGKDKNLHIMMTESESEQEDVGKEGIEWIMNLPDVPMKLPPHVELQRTRVECKGDAPIHTDTIQYSGAFASMGFDNSLRLDNFRNNFKIEVINLKGDDI
        MSGKDKNLH  M+ESESEQE V KEGIEWIMNLPDVPMKLPPHVELQRTRVECK DAPIHTDTIQYSGAFASMGFDNSLRLDNFRNNFKIEVI+LK DDI
Subjt:  MSGKDKNLHIMMTESESEQEDVGKEGIEWIMNLPDVPMKLPPHVELQRTRVECKGDAPIHTDTIQYSGAFASMGFDNSLRLDNFRNNFKIEVINLKGDDI

Query:  EFDMIGIDPALANAFRRILIAEVPTMAIEKVLFANNTSIVQDEVLAHRLGLIPIRVDPRLFKYSDKDAPNENNTIVFRLHARCERGKPRLTVKSEALTWL
        EFDMIGIDPALANAFRRILI+EVPTMAIEKVLFANNTSIVQDEVLAHRLGL+PIRVDPRLFKYSDKDAPNENNTIVFRLHA CERGKPRLTV S+ALTWL
Subjt:  EFDMIGIDPALANAFRRILIAEVPTMAIEKVLFANNTSIVQDEVLAHRLGLIPIRVDPRLFKYSDKDAPNENNTIVFRLHARCERGKPRLTVKSEALTWL

Query:  PNGSEFPLVSDKSIPNSKPQTYTSFSCSQDKL-PEFSKNSIGPKDSDIILARLGPGQEIELEAHAVKGMGKTHAKWSPVATAWYRMLPEVLLLEEIEDEL
        PNGSEFPLVSDKS+ NSKP+TYTSFSCSQ+ L  EFS N IGPKDSDIILARLGPGQEIELEAHAVKGMGKTHAKWSPVATAWYRMLPEV+L+EEIEDEL
Subjt:  PNGSEFPLVSDKSIPNSKPQTYTSFSCSQDKL-PEFSKNSIGPKDSDIILARLGPGQEIELEAHAVKGMGKTHAKWSPVATAWYRMLPEVLLLEEIEDEL

Query:  AEELKRKCPVNVFDIEDIAGKKRATVARPRACTLCRECIRGDAWEKRVALRRVKDHFIFKIESTGALPPNVLFTEAVKILEDKCERLIAELS
        AEEL++KCPVNVFDIEDIAGKKRATVARPR CTLCRECIRGDAWEKRVALRRVKDHFIFKIESTGALPP VLFTEAVKILEDKCERLIAELS
Subjt:  AEELKRKCPVNVFDIEDIAGKKRATVARPRACTLCRECIRGDAWEKRVALRRVKDHFIFKIESTGALPPNVLFTEAVKILEDKCERLIAELS

XP_008449040.1 PREDICTED: DNA-directed RNA polymerases I and III subunit RPAC1 [Cucumis melo]7.0e-225100Show/hide
Query:  MSGKDKNLHIMMTESESEQEDVGKEGIEWIMNLPDVPMKLPPHVELQRTRVECKGDAPIHTDTIQYSGAFASMGFDNSLRLDNFRNNFKIEVINLKGDDI
        MSGKDKNLHIMMTESESEQEDVGKEGIEWIMNLPDVPMKLPPHVELQRTRVECKGDAPIHTDTIQYSGAFASMGFDNSLRLDNFRNNFKIEVINLKGDDI
Subjt:  MSGKDKNLHIMMTESESEQEDVGKEGIEWIMNLPDVPMKLPPHVELQRTRVECKGDAPIHTDTIQYSGAFASMGFDNSLRLDNFRNNFKIEVINLKGDDI

Query:  EFDMIGIDPALANAFRRILIAEVPTMAIEKVLFANNTSIVQDEVLAHRLGLIPIRVDPRLFKYSDKDAPNENNTIVFRLHARCERGKPRLTVKSEALTWL
        EFDMIGIDPALANAFRRILIAEVPTMAIEKVLFANNTSIVQDEVLAHRLGLIPIRVDPRLFKYSDKDAPNENNTIVFRLHARCERGKPRLTVKSEALTWL
Subjt:  EFDMIGIDPALANAFRRILIAEVPTMAIEKVLFANNTSIVQDEVLAHRLGLIPIRVDPRLFKYSDKDAPNENNTIVFRLHARCERGKPRLTVKSEALTWL

Query:  PNGSEFPLVSDKSIPNSKPQTYTSFSCSQDKLPEFSKNSIGPKDSDIILARLGPGQEIELEAHAVKGMGKTHAKWSPVATAWYRMLPEVLLLEEIEDELA
        PNGSEFPLVSDKSIPNSKPQTYTSFSCSQDKLPEFSKNSIGPKDSDIILARLGPGQEIELEAHAVKGMGKTHAKWSPVATAWYRMLPEVLLLEEIEDELA
Subjt:  PNGSEFPLVSDKSIPNSKPQTYTSFSCSQDKLPEFSKNSIGPKDSDIILARLGPGQEIELEAHAVKGMGKTHAKWSPVATAWYRMLPEVLLLEEIEDELA

Query:  EELKRKCPVNVFDIEDIAGKKRATVARPRACTLCRECIRGDAWEKRVALRRVKDHFIFKIESTGALPPNVLFTEAVKILEDKCERLIAELS
        EELKRKCPVNVFDIEDIAGKKRATVARPRACTLCRECIRGDAWEKRVALRRVKDHFIFKIESTGALPPNVLFTEAVKILEDKCERLIAELS
Subjt:  EELKRKCPVNVFDIEDIAGKKRATVARPRACTLCRECIRGDAWEKRVALRRVKDHFIFKIESTGALPPNVLFTEAVKILEDKCERLIAELS

XP_023005438.1 DNA-directed RNA polymerases I and III subunit RPAC1 [Cucurbita maxima]1.1e-20190.31Show/hide
Query:  MSGKDKNLHIMMTESESEQEDVGKEGIEWIMNLPDVPMKLPPHVELQRTRVECKGDAPIHTDTIQYSGAFASMGFDNSLRLDNFRNNFKIEVINLKGDDI
        MSG+DKNLH  M+ES+SEQEDVGKEGIEWIMNLPDVPMKLPPHVELQRTRVECK DAPIHTDTIQYSGA+AS+G DNSLRLD+FR NFKIEVI+LK DD+
Subjt:  MSGKDKNLHIMMTESESEQEDVGKEGIEWIMNLPDVPMKLPPHVELQRTRVECKGDAPIHTDTIQYSGAFASMGFDNSLRLDNFRNNFKIEVINLKGDDI

Query:  EFDMIGIDPALANAFRRILIAEVPTMAIEKVLFANNTSIVQDEVLAHRLGLIPIRVDPRLFKYSDKDAPNENNTIVFRLHARCERGKPRLTVKSEALTWL
        EFDMIGIDP+LANAFRRILIAEVPTMAIEKVL ANNTSIVQDEVLAHRLGLIPIRVDPRLF+YSDKD PNE NTIVFRLH RCERGKPRLT  SEALTWL
Subjt:  EFDMIGIDPALANAFRRILIAEVPTMAIEKVLFANNTSIVQDEVLAHRLGLIPIRVDPRLFKYSDKDAPNENNTIVFRLHARCERGKPRLTVKSEALTWL

Query:  PNGSEFPLVSDKSIPNSKPQTYTSFSCSQDKLPEFSKNSIGPKDSDIILARLGPGQEIELEAHAVKGMGKTHAKWSPVATAWYRMLPEVLLLEEIEDELA
        PNGSEFPLVSDKS+ NSKP+TYTSFSCSQD LPEF+ N IGPKD DIILARL  GQEIELEAHAVKGMGKTHAKWSPVATAWYRMLPEV+LLEEIEDELA
Subjt:  PNGSEFPLVSDKSIPNSKPQTYTSFSCSQDKLPEFSKNSIGPKDSDIILARLGPGQEIELEAHAVKGMGKTHAKWSPVATAWYRMLPEVLLLEEIEDELA

Query:  EELKRKCPVNVFDIEDIA-GKKRATVARPRACTLCRECIRGDAWEKRVALRRVKDHFIFKIESTGALPPNVLFTEAVKILEDKCERLIAELS
        EELK KCPVNVFDIEDIA GKKRATVARPRACTLCRECIRG+AWEKRV+LRRVKDHFIFKIESTGALPP VLFTEAVKILEDKCERLIAELS
Subjt:  EELKRKCPVNVFDIEDIA-GKKRATVARPRACTLCRECIRGDAWEKRVALRRVKDHFIFKIESTGALPPNVLFTEAVKILEDKCERLIAELS

XP_038903474.1 DNA-directed RNA polymerases I and III subunit RPAC1 isoform X1 [Benincasa hispida]4.4e-20391.3Show/hide
Query:  MSGKDKNLHIMMTESESEQEDVGKEGIEWIMNLPDVPMKLPPHVELQRTRVECKGDAPIHTDTIQYSGAFASMGFDNSLRLDNFRNNFKIEVINLKGDDI
        MSGKDK+LH  M++SESEQE V KEGIEWIMNLPDVPMKLPPH+ELQRTRVECK DAPIHTDTIQYSGAFASMG DNSLRLD FRNNFKIEVI+LK DDI
Subjt:  MSGKDKNLHIMMTESESEQEDVGKEGIEWIMNLPDVPMKLPPHVELQRTRVECKGDAPIHTDTIQYSGAFASMGFDNSLRLDNFRNNFKIEVINLKGDDI

Query:  EFDMIGIDPALANAFRRILIAEVPTMAIEKVLFANNTSIVQDEVLAHRLGLIPIRVDPRLFKYSDKDAPNENNTIVFRLHARCERGKPRLTVKSEALTWL
        EFDMIGIDPALANAFRRILIAEVPTMAIEKVL ANNTSIVQDEVLAHRLGL+PI VDPRLF+YSDKD PNE NTIVFRLHA CERGK RLTV S+ALTWL
Subjt:  EFDMIGIDPALANAFRRILIAEVPTMAIEKVLFANNTSIVQDEVLAHRLGLIPIRVDPRLFKYSDKDAPNENNTIVFRLHARCERGKPRLTVKSEALTWL

Query:  PNGSEFPLVSDKSIPNSKPQTYTSFSCSQDKLPEFSKNSIGPKDSDIILARLGPGQEIELEAHAVKGMGKTHAKWSPVATAWYRMLPEVLLLEEIEDELA
        PNGSEFPLVSDKS+ NSKP+TYTSFSCSQD LPEFS N IGPKDSDIILARLGPGQEIELEAHAVKGMGKTHAKWSPVATAWYRMLPEV+LLEEI+DELA
Subjt:  PNGSEFPLVSDKSIPNSKPQTYTSFSCSQDKLPEFSKNSIGPKDSDIILARLGPGQEIELEAHAVKGMGKTHAKWSPVATAWYRMLPEVLLLEEIEDELA

Query:  EELKRKCPVNVFDIEDIAGKKRATVARPRACTLCRECIRGDAWEKRVALRRVKDHFIFKIESTGALPPNVLFTEAVKILEDKCERLIAELS
        EELK+KCPVNVFDIEDIAGKKRATVARPRACTLCRECIRGD WEKRVALRRVKDHFIFKIESTGALPP VLFTEAVKILEDKCERLIAELS
Subjt:  EELKRKCPVNVFDIEDIAGKKRATVARPRACTLCRECIRGDAWEKRVALRRVKDHFIFKIESTGALPPNVLFTEAVKILEDKCERLIAELS

TrEMBL top hitse value%identityAlignment
A0A0A0L637 DNA-directed RNA polymerases I and III subunit RPAC11.6e-20692.86Show/hide
Query:  MSGKDKNLHIMMTESESEQEDVGKEGIEWIMNLPDVPMKLPPHVELQRTRVECKGDAPIHTDTIQYSGAFASMGFDNSLRLDNFRNNFKIEVINLKGDDI
        MSGKDKNLH  M+ESESEQE V KEGIEWIMNLPDVPMKLPPHVELQRTRVECK DAPIHTDTIQYSGAFASMGFDNSLRLDNFRNNFKIEVI+LK DDI
Subjt:  MSGKDKNLHIMMTESESEQEDVGKEGIEWIMNLPDVPMKLPPHVELQRTRVECKGDAPIHTDTIQYSGAFASMGFDNSLRLDNFRNNFKIEVINLKGDDI

Query:  EFDMIGIDPALANAFRRILIAEVPTMAIEKVLFANNTSIVQDEVLAHRLGLIPIRVDPRLFKYSDKDAPNENNTIVFRLHARCERGKPRLTVKSEALTWL
        EFDMIGIDPALANAFRRILI+EVPTMAIEKVLFANNTSIVQDEVLAHRLGL+PIRVDPRLFKYSDKDAPNENNTIVFRLHA CERGKPRLTV S+ALTWL
Subjt:  EFDMIGIDPALANAFRRILIAEVPTMAIEKVLFANNTSIVQDEVLAHRLGLIPIRVDPRLFKYSDKDAPNENNTIVFRLHARCERGKPRLTVKSEALTWL

Query:  PNGSEFPLVSDKSIPNSKPQTYTSFSCSQDKL-PEFSKNSIGPKDSDIILARLGPGQEIELEAHAVKGMGKTHAKWSPVATAWYRMLPEVLLLEEIEDEL
        PNGSEFPLVSDKS+ NSKP+TYTSFSCSQ+ L  EFS N IGPKDSDIILARLGPGQEIELEAHAVKGMGKTHAKWSPVATAWYRMLPEV+L+EEIEDEL
Subjt:  PNGSEFPLVSDKSIPNSKPQTYTSFSCSQDKL-PEFSKNSIGPKDSDIILARLGPGQEIELEAHAVKGMGKTHAKWSPVATAWYRMLPEVLLLEEIEDEL

Query:  AEELKRKCPVNVFDIEDIAGKKRATVARPRACTLCRECIRGDAWEKRVALRRVKDHFIFKIESTGALPPNVLFTEAVKILEDKCERLIAELS
        AEEL++KCPVNVFDIEDIAGKKRATVARPR CTLCRECIRGDAWEKRVALRRVKDHFIFKIESTGALPP VLFTEAVKILEDKCERLIAELS
Subjt:  AEELKRKCPVNVFDIEDIAGKKRATVARPRACTLCRECIRGDAWEKRVALRRVKDHFIFKIESTGALPPNVLFTEAVKILEDKCERLIAELS

A0A1S4DX61 DNA-directed RNA polymerases I and III subunit RPAC13.4e-225100Show/hide
Query:  MSGKDKNLHIMMTESESEQEDVGKEGIEWIMNLPDVPMKLPPHVELQRTRVECKGDAPIHTDTIQYSGAFASMGFDNSLRLDNFRNNFKIEVINLKGDDI
        MSGKDKNLHIMMTESESEQEDVGKEGIEWIMNLPDVPMKLPPHVELQRTRVECKGDAPIHTDTIQYSGAFASMGFDNSLRLDNFRNNFKIEVINLKGDDI
Subjt:  MSGKDKNLHIMMTESESEQEDVGKEGIEWIMNLPDVPMKLPPHVELQRTRVECKGDAPIHTDTIQYSGAFASMGFDNSLRLDNFRNNFKIEVINLKGDDI

Query:  EFDMIGIDPALANAFRRILIAEVPTMAIEKVLFANNTSIVQDEVLAHRLGLIPIRVDPRLFKYSDKDAPNENNTIVFRLHARCERGKPRLTVKSEALTWL
        EFDMIGIDPALANAFRRILIAEVPTMAIEKVLFANNTSIVQDEVLAHRLGLIPIRVDPRLFKYSDKDAPNENNTIVFRLHARCERGKPRLTVKSEALTWL
Subjt:  EFDMIGIDPALANAFRRILIAEVPTMAIEKVLFANNTSIVQDEVLAHRLGLIPIRVDPRLFKYSDKDAPNENNTIVFRLHARCERGKPRLTVKSEALTWL

Query:  PNGSEFPLVSDKSIPNSKPQTYTSFSCSQDKLPEFSKNSIGPKDSDIILARLGPGQEIELEAHAVKGMGKTHAKWSPVATAWYRMLPEVLLLEEIEDELA
        PNGSEFPLVSDKSIPNSKPQTYTSFSCSQDKLPEFSKNSIGPKDSDIILARLGPGQEIELEAHAVKGMGKTHAKWSPVATAWYRMLPEVLLLEEIEDELA
Subjt:  PNGSEFPLVSDKSIPNSKPQTYTSFSCSQDKLPEFSKNSIGPKDSDIILARLGPGQEIELEAHAVKGMGKTHAKWSPVATAWYRMLPEVLLLEEIEDELA

Query:  EELKRKCPVNVFDIEDIAGKKRATVARPRACTLCRECIRGDAWEKRVALRRVKDHFIFKIESTGALPPNVLFTEAVKILEDKCERLIAELS
        EELKRKCPVNVFDIEDIAGKKRATVARPRACTLCRECIRGDAWEKRVALRRVKDHFIFKIESTGALPPNVLFTEAVKILEDKCERLIAELS
Subjt:  EELKRKCPVNVFDIEDIAGKKRATVARPRACTLCRECIRGDAWEKRVALRRVKDHFIFKIESTGALPPNVLFTEAVKILEDKCERLIAELS

A0A6J1DXI7 DNA-directed RNA polymerases I and III subunit RPAC14.8e-19589.24Show/hide
Query:  MTESESEQEDVGKEGIEWIMNLPDVPMKLPPHVELQRTRVECKGDAPIHTDTIQYSGAFASMGFDNSLRLDNFRNNFKIEVINLKGDDIEFDMIGIDPAL
        M++SESEQ   GKEGIEWIMNLPDVPMKLPPH+E+QRTRVECK DAPIHTDTIQYSGA+ASMG DNSLRLD FRNNFKIEVI+L  DDIEFDMIGIDPAL
Subjt:  MTESESEQEDVGKEGIEWIMNLPDVPMKLPPHVELQRTRVECKGDAPIHTDTIQYSGAFASMGFDNSLRLDNFRNNFKIEVINLKGDDIEFDMIGIDPAL

Query:  ANAFRRILIAEVPTMAIEKVLFANNTSIVQDEVLAHRLGLIPIRVDPRLFKYSDKDAPNENNTIVFRLHARCERGKPRLTVKSEALTWLPNGSEFPLVSD
        ANAFRRILIAEVPTMAIEKVL ANNTS++QDEVLAHRLGLIPI VDPRLF+YSDKD PNE NTIVFRLHARCERGKPRLTV S+ LTWLPNGSEFPLVSD
Subjt:  ANAFRRILIAEVPTMAIEKVLFANNTSIVQDEVLAHRLGLIPIRVDPRLFKYSDKDAPNENNTIVFRLHARCERGKPRLTVKSEALTWLPNGSEFPLVSD

Query:  KSIPNSKPQTYTSFSCSQDKLPEFSKNSIGPKDSDIILARLGPGQEIELEAHAVKGMGKTHAKWSPVATAWYRMLPEVLLLEEIEDELAEELKRKCPVNV
        KS+PNSKP+TYTSFSCSQD LPEFS NSIGPKD+DII+ARLGPGQEIELEAHAVKGMGKTHAKWSPVATAWY+MLPEV+L EEIEDELAEELK+KCPV+V
Subjt:  KSIPNSKPQTYTSFSCSQDKLPEFSKNSIGPKDSDIILARLGPGQEIELEAHAVKGMGKTHAKWSPVATAWYRMLPEVLLLEEIEDELAEELKRKCPVNV

Query:  FDIEDIA-GKKRATVARPRACTLCRECIRGDAWEKRVALRRVKDHFIFKIESTGALPPNVLFTEAVKILEDKCERLIAELS
        FDIEDIA GKKRA VARPR+CTLCRECIRG+AWEKRV+LRRVKDHFIFKIESTGALPP VLFTEAVKILEDKCERLIAELS
Subjt:  FDIEDIA-GKKRATVARPRACTLCRECIRGDAWEKRVALRRVKDHFIFKIESTGALPPNVLFTEAVKILEDKCERLIAELS

A0A6J1FDA3 DNA-directed RNA polymerases I and III subunit RPAC13.4e-20189.8Show/hide
Query:  MSGKDKNLHIMMTESESEQEDVGKEGIEWIMNLPDVPMKLPPHVELQRTRVECKGDAPIHTDTIQYSGAFASMGFDNSLRLDNFRNNFKIEVINLKGDDI
        MSGKDKNLH  M+ES+SEQEDVGKEGIEWIMNLPDVPMKLPPHVELQRTRVECK DAPIHTDTIQYSGA+AS+G DNSLRLD+FR NFKIEVI+LK DD+
Subjt:  MSGKDKNLHIMMTESESEQEDVGKEGIEWIMNLPDVPMKLPPHVELQRTRVECKGDAPIHTDTIQYSGAFASMGFDNSLRLDNFRNNFKIEVINLKGDDI

Query:  EFDMIGIDPALANAFRRILIAEVPTMAIEKVLFANNTSIVQDEVLAHRLGLIPIRVDPRLFKYSDKDAPNENNTIVFRLHARCERGKPRLTVKSEALTWL
        EFDMIGIDP+LANAFRRILIAEVPTMAIEKVL ANNTSIVQDEVLAHRLGLIPIRVDPRLF+YSDKD PNE NTIVFRLH RCERGKPRLT  S+ALTWL
Subjt:  EFDMIGIDPALANAFRRILIAEVPTMAIEKVLFANNTSIVQDEVLAHRLGLIPIRVDPRLFKYSDKDAPNENNTIVFRLHARCERGKPRLTVKSEALTWL

Query:  PNGSEFPLVSDKSIPNSKPQTYTSFSCSQDKLPEFSKNSIGPKDSDIILARLGPGQEIELEAHAVKGMGKTHAKWSPVATAWYRMLPEVLLLEEIEDELA
        PNGSEFPLVSDKS+ N+KP+TYTSFSCSQD LPEF+ N IGPKD DIILARL  GQEIELEAHAVKGMGKTHAKWSPVATAWYRMLPEV+LLE+IEDELA
Subjt:  PNGSEFPLVSDKSIPNSKPQTYTSFSCSQDKLPEFSKNSIGPKDSDIILARLGPGQEIELEAHAVKGMGKTHAKWSPVATAWYRMLPEVLLLEEIEDELA

Query:  EELKRKCPVNVFDIEDIA-GKKRATVARPRACTLCRECIRGDAWEKRVALRRVKDHFIFKIESTGALPPNVLFTEAVKILEDKCERLIAELS
        EELK KCPVNVFDIEDIA GKKRATVARPRACTLCRECIRG+AWEKRV+LRRVKDHFIFKIESTGALPP VLFTEAVKILEDKCERLIAELS
Subjt:  EELKRKCPVNVFDIEDIA-GKKRATVARPRACTLCRECIRGDAWEKRVALRRVKDHFIFKIESTGALPPNVLFTEAVKILEDKCERLIAELS

A0A6J1L269 DNA-directed RNA polymerases I and III subunit RPAC15.3e-20290.31Show/hide
Query:  MSGKDKNLHIMMTESESEQEDVGKEGIEWIMNLPDVPMKLPPHVELQRTRVECKGDAPIHTDTIQYSGAFASMGFDNSLRLDNFRNNFKIEVINLKGDDI
        MSG+DKNLH  M+ES+SEQEDVGKEGIEWIMNLPDVPMKLPPHVELQRTRVECK DAPIHTDTIQYSGA+AS+G DNSLRLD+FR NFKIEVI+LK DD+
Subjt:  MSGKDKNLHIMMTESESEQEDVGKEGIEWIMNLPDVPMKLPPHVELQRTRVECKGDAPIHTDTIQYSGAFASMGFDNSLRLDNFRNNFKIEVINLKGDDI

Query:  EFDMIGIDPALANAFRRILIAEVPTMAIEKVLFANNTSIVQDEVLAHRLGLIPIRVDPRLFKYSDKDAPNENNTIVFRLHARCERGKPRLTVKSEALTWL
        EFDMIGIDP+LANAFRRILIAEVPTMAIEKVL ANNTSIVQDEVLAHRLGLIPIRVDPRLF+YSDKD PNE NTIVFRLH RCERGKPRLT  SEALTWL
Subjt:  EFDMIGIDPALANAFRRILIAEVPTMAIEKVLFANNTSIVQDEVLAHRLGLIPIRVDPRLFKYSDKDAPNENNTIVFRLHARCERGKPRLTVKSEALTWL

Query:  PNGSEFPLVSDKSIPNSKPQTYTSFSCSQDKLPEFSKNSIGPKDSDIILARLGPGQEIELEAHAVKGMGKTHAKWSPVATAWYRMLPEVLLLEEIEDELA
        PNGSEFPLVSDKS+ NSKP+TYTSFSCSQD LPEF+ N IGPKD DIILARL  GQEIELEAHAVKGMGKTHAKWSPVATAWYRMLPEV+LLEEIEDELA
Subjt:  PNGSEFPLVSDKSIPNSKPQTYTSFSCSQDKLPEFSKNSIGPKDSDIILARLGPGQEIELEAHAVKGMGKTHAKWSPVATAWYRMLPEVLLLEEIEDELA

Query:  EELKRKCPVNVFDIEDIA-GKKRATVARPRACTLCRECIRGDAWEKRVALRRVKDHFIFKIESTGALPPNVLFTEAVKILEDKCERLIAELS
        EELK KCPVNVFDIEDIA GKKRATVARPRACTLCRECIRG+AWEKRV+LRRVKDHFIFKIESTGALPP VLFTEAVKILEDKCERLIAELS
Subjt:  EELKRKCPVNVFDIEDIA-GKKRATVARPRACTLCRECIRGDAWEKRVALRRVKDHFIFKIESTGALPPNVLFTEAVKILEDKCERLIAELS

SwissProt top hitse value%identityAlignment
O15160 DNA-directed RNA polymerases I and III subunit RPAC17.1e-7944.75Show/hide
Query:  VELQRTRVECKGDAPIHTDTIQYSGAFASMGFDNSLRLDNFRNNFKIEVINLKGDDIEFDMIGIDPALANAFRRILIAEVPTMAIEKVLFANNTSIVQDE
        VE  R+RV        +  T  + G ++  G+D++   D F  NF+++V+++  + +EFDM+GID A+ANAFRRIL+AEVPTMA+EKVL  NNTSIVQDE
Subjt:  VELQRTRVECKGDAPIHTDTIQYSGAFASMGFDNSLRLDNFRNNFKIEVINLKGDDIEFDMIGIDPALANAFRRILIAEVPTMAIEKVLFANNTSIVQDE

Query:  VLAHRLGLIPIRVDPRLFKYSDK--DAPNENNTIVFRLHARCERGKPRLTVKSEA-------------LTWLPNGSEFPLVSDKSIPNSKPQTYTSFSCS
        +LAHRLGLIPI  DPRLF+Y ++  +   E +T+ FRL  RC R        S+              +TW+P G++  L                    
Subjt:  VLAHRLGLIPIRVDPRLFKYSDK--DAPNENNTIVFRLHARCERGKPRLTVKSEA-------------LTWLPNGSEFPLVSDKSIPNSKPQTYTSFSCS

Query:  QDKLPEFSKNSIGPKDSDIILARLGPGQEIELEAHAVKGMGKTHAKWSPVATAWYRMLPEVLLLEEIEDELAEELKRKCPVNVFDIEDIAGKKRATVARP
              F + +I P   DI++A+L PGQEI+L  H VKG+GK HAK+SPVATA YR+LP++ LLE +E E AEEL R     V +++++ GKK A VA P
Subjt:  QDKLPEFSKNSIGPKDSDIILARLGPGQEIELEAHAVKGMGKTHAKWSPVATAWYRMLPEVLLLEEIEDELAEELKRKCPVNVFDIEDIAGKKRATVARP

Query:  RACTLCRECIRGDAWEKRVALRRVKDHFIFKIESTGALPPNVLFTEAVKILEDKCERLIAEL
        R  T  RE  R +  +K V L RV+DH+IF +ESTG LPP+VL +EA+K+L  KC R + EL
Subjt:  RACTLCRECIRGDAWEKRVALRRVKDHFIFKIESTGALPPNVLFTEAVKILEDKCERLIAEL

O94616 DNA-directed RNA polymerases I and III subunit RPAC18.4e-6438.89Show/hide
Query:  VELQRTRVECKGDAPIHTDTIQYSGAFASMGFDNSLRLDNFRNNFKIEVINLKGDDIEFDMIGIDPALANAFRRILIAEVPTMAIEKVLFANNTSIVQDE
        V+  RT +    D      ++ + G +     DN   LD F+ N K+ + +L  + + F++ GID ++ANAFRRILIAE+PT+A E V   NNTSI+QDE
Subjt:  VELQRTRVECKGDAPIHTDTIQYSGAFASMGFDNSLRLDNFRNNFKIEVINLKGDDIEFDMIGIDPALANAFRRILIAEVPTMAIEKVLFANNTSIVQDE

Query:  VLAHRLGLIPIRVDPRLFKYSDKDAPNEN------NTIVFRLHARCERGK---------PRLTVKSEA----LTWLPNGSEFPLVSDKSIPNSKPQTYTS
        VL+HR+GL+PI  DP +FK+     P +       +T+VF L+ +CE  K          RL V SE     L W P G +                   
Subjt:  VLAHRLGLIPIRVDPRLFKYSDKDAPNEN------NTIVFRLHARCERGK---------PRLTVKSEA----LTWLPNGSEFPLVSDKSIPNSKPQTYTS

Query:  FSCSQDKLPEFSKNSIGPKDSDIILARLGPGQEIELEAHAVKGMGKTHAKWSPVATAWYRMLPEVLLLEEIEDELAEELKRKCPVNVFDIED-IAGKKRA
                  F+ N I   + DI++A+L PGQEI+LEAHA+ G+G+ HAK+SPVATA YR+LP + +L  IE E A + ++  P  V ++E+   GKK+A
Subjt:  FSCSQDKLPEFSKNSIGPKDSDIILARLGPGQEIELEAHAVKGMGKTHAKWSPVATAWYRMLPEVLLLEEIEDELAEELKRKCPVNVFDIED-IAGKKRA

Query:  TVARPRACTLCRECIRGDAWEKRVALRRVKDHFIFKIESTGALPPNVLFTEAVKILEDKC
         VA  R  T+ REC+R   +  +V L RV+DH++F +ESTG + P+VLF +++ +L+ KC
Subjt:  TVARPRACTLCRECIRGDAWEKRVALRRVKDHFIFKIESTGALPPNVLFTEAVKILEDKC

P52432 DNA-directed RNA polymerases I and III subunit RPAC16.0e-7846.65Show/hide
Query:  VELQRTRVECKGDAPIHTDTIQYSGAFASMGFDNSLRLDNFRNNFKIEVINLKGDDIEFDMIGIDPALANAFRRILIAEVPTMAIEKVLFANNTSIVQDE
        VE  RTRV        +  T  + G +A  G+D++   + F  NF+++V+ +  D +EFDM+GID A+ANAFRRIL+AEVPTMA+EKVL  NNTSIVQDE
Subjt:  VELQRTRVECKGDAPIHTDTIQYSGAFASMGFDNSLRLDNFRNNFKIEVINLKGDDIEFDMIGIDPALANAFRRILIAEVPTMAIEKVLFANNTSIVQDE

Query:  VLAHRLGLIPIRVDPRLFKYSD--KDAPNENNTIVFRLHARCERGKPRLTVKSEALTWLPNGSEFPLVSDKSIPN---------SKPQTYTSFSCSQDKL
        +LAHRLGLIPI  DPRLF+Y +  ++   E +T+ FRL  RC R               PN ++     D S PN         ++  T+       D  
Subjt:  VLAHRLGLIPIRVDPRLFKYSD--KDAPNENNTIVFRLHARCERGKPRLTVKSEALTWLPNGSEFPLVSDKSIPN---------SKPQTYTSFSCSQDKL

Query:  PEFSKNSIGPKDSDIILARLGPGQEIELEAHAVKGMGKTHAKWSPVATAWYRMLPEVLLLEEIEDELAEELKRKCPVNVFDIEDIAGKKRATVARPRACT
        PE    +I P   DI++A+L PGQEI+L  H VKG+GK HAK+SPVATA YR+LP + LLE +E E AEEL +     V ++E++ GKK A VA  R  T
Subjt:  PEFSKNSIGPKDSDIILARLGPGQEIELEAHAVKGMGKTHAKWSPVATAWYRMLPEVLLLEEIEDELAEELKRKCPVNVFDIEDIAGKKRATVARPRACT

Query:  LCRECIRGDAWEKRVALRRVKDHFIFKIESTGALPPNVLFTEAVKILEDKCERLIAEL
          RE  R +  +K V L RV+DH+IF +ESTG LPP+VL +EA+KIL  KC R + EL
Subjt:  LCRECIRGDAWEKRVALRRVKDHFIFKIESTGALPPNVLFTEAVKILEDKCERLIAEL

Q32L22 DNA-directed RNA polymerases I and III subunit RPAC16.4e-8046.99Show/hide
Query:  VELQRTRVECKGDAPIHTDTIQYSGAFASMGFDNSLRLDNFRNNFKIEVINLKGDDIEFDMIGIDPALANAFRRILIAEVPTMAIEKVLFANNTSIVQDE
        VE  RTRV        +  T  + G ++  G+D++   D F  NF+++V+++  + +EFDM+GID A+ANAFRRIL+AEVPTMA+EKVL  NNTSIVQDE
Subjt:  VELQRTRVECKGDAPIHTDTIQYSGAFASMGFDNSLRLDNFRNNFKIEVINLKGDDIEFDMIGIDPALANAFRRILIAEVPTMAIEKVLFANNTSIVQDE

Query:  VLAHRLGLIPIRVDPRLFKYSDK--DAPNENNTIVFRLHARCERGKPRLTVKSEALTWLPNGSEFPLVSDKSIPNSKPQTYTSFSCSQDKLPEFSKNSIG
        +LAHRLGLIPI  DPRLF+Y ++  +   E +T+ FRL  RC R        S+      N   +          ++  T+       D  PE    +I 
Subjt:  VLAHRLGLIPIRVDPRLFKYSDK--DAPNENNTIVFRLHARCERGKPRLTVKSEALTWLPNGSEFPLVSDKSIPNSKPQTYTSFSCSQDKLPEFSKNSIG

Query:  PKDSDIILARLGPGQEIELEAHAVKGMGKTHAKWSPVATAWYRMLPEVLLLEEIEDELAEELKRKCPVNVFDIEDIAGKKRATVARPRACTLCRECIRGD
        P   DI++A+L PGQEI+L  H VKG+GK HAK+SPVATA YR+LP++ LLE +E E AEEL R     V ++++I GKK A VA PR  T  RE  R +
Subjt:  PKDSDIILARLGPGQEIELEAHAVKGMGKTHAKWSPVATAWYRMLPEVLLLEEIEDELAEELKRKCPVNVFDIEDIAGKKRATVARPRACTLCRECIRGD

Query:  AWEKRVALRRVKDHFIFKIESTGALPPNVLFTEAVKILEDKCERLIAEL
          +K V L RV+DHFIF +ESTG LPP+VL +EA+K+L  KC+R + EL
Subjt:  AWEKRVALRRVKDHFIFKIESTGALPPNVLFTEAVKILEDKCERLIAEL

Q54SN4 DNA-directed RNA polymerases I and III subunit rpac11.3e-7242.17Show/hide
Query:  PHVELQRTRVECKGDAPIHTDTIQYSGAFASMGFDNSLRLDNFRNNFKIEVINLKGDDIEFDMIGIDPALANAFRRILIAEVPTMAIEKVLFANNTSIVQ
        P++E +RT+V        +     YSGA+ S+G+DNS  L+ F+ NFKI +++   +++ F+MIGID  +ANA RRI+I+E+PTMAIEKV   NNTSI+Q
Subjt:  PHVELQRTRVECKGDAPIHTDTIQYSGAFASMGFDNSLRLDNFRNNFKIEVINLKGDDIEFDMIGIDPALANAFRRILIAEVPTMAIEKVLFANNTSIVQ

Query:  DEVLAHRLGLIPIRVDPRLFKYSDKDAPNE----NNTIVFRLHARCER----GK-PRLTVKSEALTWLPNGSEFPLVSDKSIPNSKPQTYTSFSCSQDKL
        DEVLAHRLG+IPI+VDPR F +     PN+     +T++F+L  +CE+    GK    T  S+ L W+P   +     ++  PN + +            
Subjt:  DEVLAHRLGLIPIRVDPRLFKYSDKDAPNE----NNTIVFRLHARCER----GK-PRLTVKSEALTWLPNGSEFPLVSDKSIPNSKPQTYTSFSCSQDKL

Query:  PEFSKNSIGPKDSDIILARLGPGQEIELEAHAVKGMGKTHAKWSPVATAWYRMLPEVLLLEEIEDELAEELKRKCPVNVFDIEDIAGKKRATVARPRACT
                 P + DI + +L PGQ I+++ +  K +G+ H KWSPV TA YR+ P + + + I+ + A +L  KCP  VFDIED     +   ARP  CT
Subjt:  PEFSKNSIGPKDSDIILARLGPGQEIELEAHAVKGMGKTHAKWSPVATAWYRMLPEVLLLEEIEDELAEELKRKCPVNVFDIEDIAGKKRATVARPRACT

Query:  LCRECIRGDAWEKRVALRRVKDHFIFKIESTGALPPNVLFTEAVKILEDKC
        +CRECIR   +E+ V + RV+DHFIF IESTGAL    +F EA+KI  +KC
Subjt:  LCRECIRGDAWEKRVALRRVKDHFIFKIESTGALPPNVLFTEAVKILEDKC

Arabidopsis top hitse value%identityAlignment
AT1G60620.1 RNA polymerase I subunit 431.2e-13766.58Show/hide
Query:  IMNLPDVPMKLPPHVELQRTRVECKGDAPIHTDTIQYSGAFASMGFDNSLRLDNFRNNFKIEVINLKGDDIEFDMIGIDPALANAFRRILIAEVPTMAIE
        I +LPDVP  LPPH+ELQRTRV CK D+ IH   I +SGA++SMG DNS+RL+NF  +FK++VI+L   D+ FDMIG+   +ANAFRRIL+AE+P+MAIE
Subjt:  IMNLPDVPMKLPPHVELQRTRVECKGDAPIHTDTIQYSGAFASMGFDNSLRLDNFRNNFKIEVINLKGDDIEFDMIGIDPALANAFRRILIAEVPTMAIE

Query:  KVLFANNTSIVQDEVLAHRLGLIPIRVDPRLFKY-SDKDAPNENNTIVFRLHARCERGKPRLTVKSEALTWLPNGSEFPLVSDKSIPNSKPQTYTSFSCS
        KV  ANNTS++QDEVLAHRLGLIPI  DPRLF+Y S+ D PNE NTIVF+LH +C +G PR  V +  L WLPNGSE  L+ +     + P+TYTSF+ S
Subjt:  KVLFANNTSIVQDEVLAHRLGLIPIRVDPRLFKY-SDKDAPNENNTIVFRLHARCERGKPRLTVKSEALTWLPNGSEFPLVSDKSIPNSKPQTYTSFSCS

Query:  QDKLPEFSKNSIGPKDSDIILARLGPGQEIELEAHAVKGMGKTHAKWSPVATAWYRMLPEVLLLEEIEDELAEELKRKCPVNVFDIEDIA-GKKRATVAR
        QD  PEF++N I P   DI++A+LGPGQEIELEAHAVKG+GKTHAKWSPVATAWYRMLPEV+LL+E E + AEEL + CP  VFDIED+  G+KRATVAR
Subjt:  QDKLPEFSKNSIGPKDSDIILARLGPGQEIELEAHAVKGMGKTHAKWSPVATAWYRMLPEVLLLEEIEDELAEELKRKCPVNVFDIEDIA-GKKRATVAR

Query:  PRACTLCRECIR-GDAWEKRVALRRVKDHFIFKIESTGALPPNVLFTEAVKILEDKCERLIAELS
        PR C+LCRECIR G  WE +V LRRVK+HFIF IESTG+ PP VLF EAVKILEDKCER+I+ELS
Subjt:  PRACTLCRECIR-GDAWEKRVALRRVKDHFIFKIESTGALPPNVLFTEAVKILEDKCERLIAELS

AT1G60850.1 DNA-directed RNA polymerase family protein1.5e-12964.72Show/hide
Query:  IMNLPDVPMKLPPHVELQRTRVECKGDAPIHTDTIQYSGAF-ASMGFDNSLRLDNFRNNFKIEVINLKGDDIEFDMIGIDPALANAFRRILIAEVPTMAI
        I +LPDVP  LPPH++ Q+TRV  K +AP HT +  YSG + +S   D++++L NF +NFK++V++L   D+EFDMIGID A ANAFRRILIAEVP+MAI
Subjt:  IMNLPDVPMKLPPHVELQRTRVECKGDAPIHTDTIQYSGAF-ASMGFDNSLRLDNFRNNFKIEVINLKGDDIEFDMIGIDPALANAFRRILIAEVPTMAI

Query:  EKVLFANNTSIVQDEVLAHRLGLIPIRVDPRLFKY-SDKDAPNENNTIVFRLHARCERGKPRLTVKSEALTWLPNGSEFPLVSDKSIPNSKPQTYTSFSC
        EKVL A NTS++ DEVLAHR+GLIPI  DPRLF+Y S+ D  NE NTIVF+LH +C + +PRL V +  L WLPNGSE  L+ +     SKP+TYTSFSC
Subjt:  EKVLFANNTSIVQDEVLAHRLGLIPIRVDPRLFKY-SDKDAPNENNTIVFRLHARCERGKPRLTVKSEALTWLPNGSEFPLVSDKSIPNSKPQTYTSFSC

Query:  SQDKLPEFSKNSIGPKDSDIILARLGPGQEIELEAHAVKGMGKTHAKWSPVATAWYRMLPEVLLLEEIEDELAEELKRKCPVNVFDIEDIA-GKKRATVA
        SQD LPEF+ N I P D DI++A+L PGQEIELEAHAVKG+GKTHAKWSPV TAWYRM PEV+L  E+EDELAE L   CP NVFDIED+  GKKRATVA
Subjt:  SQDKLPEFSKNSIGPKDSDIILARLGPGQEIELEAHAVKGMGKTHAKWSPVATAWYRMLPEVLLLEEIEDELAEELKRKCPVNVFDIEDIA-GKKRATVA

Query:  RPRACTLCRECIRGDAWEKRVALRRVKDHFIFKIESTGALPPNVLFTEAVKILEDKCERL
        +PR CTLC+EC+R D     V L  VK+HFIF IESTG+LPP VLFTEAVKILE KCE +
Subjt:  RPRACTLCRECIRGDAWEKRVALRRVKDHFIFKIESTGALPPNVLFTEAVKILEDKCERL

AT1G60850.2 DNA-directed RNA polymerase family protein1.5e-12964.72Show/hide
Query:  IMNLPDVPMKLPPHVELQRTRVECKGDAPIHTDTIQYSGAF-ASMGFDNSLRLDNFRNNFKIEVINLKGDDIEFDMIGIDPALANAFRRILIAEVPTMAI
        I +LPDVP  LPPH++ Q+TRV  K +AP HT +  YSG + +S   D++++L NF +NFK++V++L   D+EFDMIGID A ANAFRRILIAEVP+MAI
Subjt:  IMNLPDVPMKLPPHVELQRTRVECKGDAPIHTDTIQYSGAF-ASMGFDNSLRLDNFRNNFKIEVINLKGDDIEFDMIGIDPALANAFRRILIAEVPTMAI

Query:  EKVLFANNTSIVQDEVLAHRLGLIPIRVDPRLFKY-SDKDAPNENNTIVFRLHARCERGKPRLTVKSEALTWLPNGSEFPLVSDKSIPNSKPQTYTSFSC
        EKVL A NTS++ DEVLAHR+GLIPI  DPRLF+Y S+ D  NE NTIVF+LH +C + +PRL V +  L WLPNGSE  L+ +     SKP+TYTSFSC
Subjt:  EKVLFANNTSIVQDEVLAHRLGLIPIRVDPRLFKY-SDKDAPNENNTIVFRLHARCERGKPRLTVKSEALTWLPNGSEFPLVSDKSIPNSKPQTYTSFSC

Query:  SQDKLPEFSKNSIGPKDSDIILARLGPGQEIELEAHAVKGMGKTHAKWSPVATAWYRMLPEVLLLEEIEDELAEELKRKCPVNVFDIEDIA-GKKRATVA
        SQD LPEF+ N I P D DI++A+L PGQEIELEAHAVKG+GKTHAKWSPV TAWYRM PEV+L  E+EDELAE L   CP NVFDIED+  GKKRATVA
Subjt:  SQDKLPEFSKNSIGPKDSDIILARLGPGQEIELEAHAVKGMGKTHAKWSPVATAWYRMLPEVLLLEEIEDELAEELKRKCPVNVFDIEDIA-GKKRATVA

Query:  RPRACTLCRECIRGDAWEKRVALRRVKDHFIFKIESTGALPPNVLFTEAVKILEDKCERL
        +PR CTLC+EC+R D     V L  VK+HFIF IESTG+LPP VLFTEAVKILE KCE +
Subjt:  RPRACTLCRECIRGDAWEKRVALRRVKDHFIFKIESTGALPPNVLFTEAVKILEDKCERL

AT1G60850.3 DNA-directed RNA polymerase family protein1.3e-9163.74Show/hide
Query:  IMNLPDVPMKLPPHVELQRTRVECKGDAPIHTDTIQYSGAF-ASMGFDNSLRLDNFRNNFKIEVINLKGDDIEFDMIGIDPALANAFRRILIAEVPTMAI
        I +LPDVP  LPPH++ Q+TRV  K +AP HT +  YSG + +S   D++++L NF +NFK++V++L   D+EFDMIGID A ANAFRRILIAEVP+MAI
Subjt:  IMNLPDVPMKLPPHVELQRTRVECKGDAPIHTDTIQYSGAF-ASMGFDNSLRLDNFRNNFKIEVINLKGDDIEFDMIGIDPALANAFRRILIAEVPTMAI

Query:  EKVLFANNTSIVQDEVLAHRLGLIPIRVDPRLFKY-SDKDAPNENNTIVFRLHARCERGKPRLTVKSEALTWLPNGSEFPLVSDKSIPNSKPQTYTSFSC
        EKVL A NTS++ DEVLAHR+GLIPI  DPRLF+Y S+ D  NE NTIVF+LH +C + +PRL V +  L WLPNGSE  L+ +     SKP+TYTSFSC
Subjt:  EKVLFANNTSIVQDEVLAHRLGLIPIRVDPRLFKY-SDKDAPNENNTIVFRLHARCERGKPRLTVKSEALTWLPNGSEFPLVSDKSIPNSKPQTYTSFSC

Query:  SQDKLPEFSKNSIGPKDSDIILARLGPGQEIELEAHAVKGMGKTHAKWSPVATAWYRMLPEV
        SQD LPEF+ N I P D DI++A+L PGQEIELEAHAVKG+GKTHAKWSPV TAWYRM PEV
Subjt:  SQDKLPEFSKNSIGPKDSDIILARLGPGQEIELEAHAVKGMGKTHAKWSPVATAWYRMLPEV

AT2G15400.1 DNA-directed RNA polymerase family protein4.6e-3332.48Show/hide
Query:  IEVINLKGDDIEFDMIGIDPALANAFRRILIAEVPTMAIEKVLFANNTSIVQDEVLAHRLGLIPIRVDPRLFKYSDKDAPNENN-------TIVFRLHAR
        +++  LK D  +F++   D ++ANA RR++I+EVPTMAI  V    N+S++ DE +A RL LIP+  +  +     +D  + N        ++ F L A+
Subjt:  IEVINLKGDDIEFDMIGIDPALANAFRRILIAEVPTMAIEKVLFANNTSIVQDEVLAHRLGLIPIRVDPRLFKYSDKDAPNENN-------TIVFRLHAR

Query:  CERGKPRLTVKSEALTWLPNGSEFPLVSDKSIPNSKPQTYTSFSCSQDKLPEFSKNSIGPKDSDIILARLGPGQEIELEAHAVKGMGKTHAKWSPVATAW
        C   +  L V S  L               + P   P  +TS S + D            +   II+A+L  GQE++L+A A KG+GK HAKWSP AT  
Subjt:  CERGKPRLTVKSEALTWLPNGSEFPLVSDKSIPNSKPQTYTSFSCSQDKLPEFSKNSIGPKDSDIILARLGPGQEIELEAHAVKGMGKTHAKWSPVATAW

Query:  YRMLPEVLLLEEIEDELAEELK----RKCPVNVFDIEDIAGKKRATVARPRACTLCRECI-RGDAWEK--RVALRRVKDHFIFKIESTGALPPNVLFTEA
        Y   P++++ EE+ + L +E K       P  VF I+ + G  +  V  P A T   E I + +A  K   + +    D F+F +ESTGAL  + L   A
Subjt:  YRMLPEVLLLEEIEDELAEELK----RKCPVNVFDIEDIAGKKRATVARPRACTLCRECI-RGDAWEK--RVALRRVKDHFIFKIESTGALPPNVLFTEA

Query:  VKILEDKCERL
        + IL+ K + +
Subjt:  VKILEDKCERL


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCCGGCAAAGATAAGAATTTGCATATTATGATGACGGAGTCGGAATCCGAACAAGAAGATGTTGGAAAAGAAGGCATTGAGTGGATAATGAATCTTCCAGACGTGCC
CATGAAGCTCCCACCACATGTTGAATTGCAGAGAACTCGAGTCGAATGCAAAGGCGATGCTCCCATTCATACAGATACCATACAGTATTCTGGAGCATTTGCTTCCATGG
GCTTTGATAACAGTTTACGTCTGGATAATTTTCGCAACAACTTTAAAATTGAAGTTATTAATCTGAAAGGGGATGACATTGAGTTTGACATGATTGGCATTGATCCAGCA
CTTGCTAATGCATTTCGAAGAATCCTGATAGCCGAGGTTCCTACTATGGCTATTGAAAAAGTTCTTTTTGCAAACAATACATCAATAGTCCAAGATGAAGTGCTTGCCCA
TAGGTTAGGTCTCATTCCGATTCGTGTTGATCCAAGGCTTTTCAAGTACTCAGATAAAGACGCACCAAATGAGAATAATACCATTGTTTTTAGGCTCCATGCTCGCTGTG
AACGAGGAAAACCACGTCTTACAGTGAAATCAGAAGCATTGACTTGGTTGCCAAATGGTAGTGAATTTCCCTTGGTGTCTGACAAATCAATTCCAAACTCAAAACCCCAA
ACCTATACTTCTTTTAGTTGCAGCCAAGACAAACTGCCAGAATTTTCCAAAAATTCAATTGGTCCAAAGGACAGTGATATTATACTTGCTAGACTTGGCCCTGGTCAGGA
AATTGAGCTTGAAGCTCATGCTGTTAAAGGTATGGGTAAAACACACGCTAAGTGGTCCCCTGTGGCCACTGCTTGGTACAGGATGCTTCCTGAGGTTCTACTCCTGGAAG
AAATAGAGGATGAGCTAGCTGAAGAACTAAAAAGGAAATGTCCTGTTAATGTATTTGACATTGAAGACATAGCTGGTAAGAAAAGGGCAACCGTAGCACGCCCACGAGCT
TGCACATTGTGTAGAGAATGCATAAGAGGAGATGCATGGGAGAAACGTGTCGCATTGCGTCGTGTGAAAGATCATTTCATTTTTAAGATTGAATCAACAGGAGCTTTACC
TCCCAATGTTCTCTTCACTGAAGCTGTAAAGATTTTGGAAGATAAGTGCGAACGTTTAATTGCCGAGCTGTCTTAA
mRNA sequenceShow/hide mRNA sequence
CCCCTCCCGTCTAAAACCTCCTCAGCCGTGCTGCTGAGTGCCGTTGCCGCCGTCTTTCTCGATTTTCCTTATCCGCCGGATATTTCTTCCTTGTTTTGGTCTCAGTTTCT
TAAAGTCTTAATTGACCCTTATCTGTCGGATTTTGCTCCCACCGCCTTATTTAAAGTTACAGCCGACCCACTGACTAAATAACTGTGCGCACACTGAATCGGAAGTTGAC
AATGTCCGGCAAAGATAAGAATTTGCATATTATGATGACGGAGTCGGAATCCGAACAAGAAGATGTTGGAAAAGAAGGCATTGAGTGGATAATGAATCTTCCAGACGTGC
CCATGAAGCTCCCACCACATGTTGAATTGCAGAGAACTCGAGTCGAATGCAAAGGCGATGCTCCCATTCATACAGATACCATACAGTATTCTGGAGCATTTGCTTCCATG
GGCTTTGATAACAGTTTACGTCTGGATAATTTTCGCAACAACTTTAAAATTGAAGTTATTAATCTGAAAGGGGATGACATTGAGTTTGACATGATTGGCATTGATCCAGC
ACTTGCTAATGCATTTCGAAGAATCCTGATAGCCGAGGTTCCTACTATGGCTATTGAAAAAGTTCTTTTTGCAAACAATACATCAATAGTCCAAGATGAAGTGCTTGCCC
ATAGGTTAGGTCTCATTCCGATTCGTGTTGATCCAAGGCTTTTCAAGTACTCAGATAAAGACGCACCAAATGAGAATAATACCATTGTTTTTAGGCTCCATGCTCGCTGT
GAACGAGGAAAACCACGTCTTACAGTGAAATCAGAAGCATTGACTTGGTTGCCAAATGGTAGTGAATTTCCCTTGGTGTCTGACAAATCAATTCCAAACTCAAAACCCCA
AACCTATACTTCTTTTAGTTGCAGCCAAGACAAACTGCCAGAATTTTCCAAAAATTCAATTGGTCCAAAGGACAGTGATATTATACTTGCTAGACTTGGCCCTGGTCAGG
AAATTGAGCTTGAAGCTCATGCTGTTAAAGGTATGGGTAAAACACACGCTAAGTGGTCCCCTGTGGCCACTGCTTGGTACAGGATGCTTCCTGAGGTTCTACTCCTGGAA
GAAATAGAGGATGAGCTAGCTGAAGAACTAAAAAGGAAATGTCCTGTTAATGTATTTGACATTGAAGACATAGCTGGTAAGAAAAGGGCAACCGTAGCACGCCCACGAGC
TTGCACATTGTGTAGAGAATGCATAAGAGGAGATGCATGGGAGAAACGTGTCGCATTGCGTCGTGTGAAAGATCATTTCATTTTTAAGATTGAATCAACAGGAGCTTTAC
CTCCCAATGTTCTCTTCACTGAAGCTGTAAAGATTTTGGAAGATAAGTGCGAACGTTTAATTGCCGAGCTGTCTTAATTCCTCTTAATCCTTAAGTCACAGACTATATTA
TTTTACTATATTTATAGGTCACCAATTTTTGTAACATATGAATGGATTATTAAGTTTTTGTTTTGAATTGACAGTGGAATAGCTTCTTCACCAATGGATTACCAAAGGTA
TCTCAAACAATTCATGTGTGTTTATTGTATAGTATTTGTAGATGACAATCTATTTTAATTGAAATTGAAAAAAAAAAAATTCTAACCTAAATTAATTTAAGTACAGATAT
AGGAAGAGAAACTTAAGACACAATTTGTCATTTGAACAATTTTTGTTTTCTTTGGAGCTTAACGTTGAAATTGTACTCTGGTGAAATGAGTATATGTATCTCTCAAGACT
CTTTTAAGG
Protein sequenceShow/hide protein sequence
MSGKDKNLHIMMTESESEQEDVGKEGIEWIMNLPDVPMKLPPHVELQRTRVECKGDAPIHTDTIQYSGAFASMGFDNSLRLDNFRNNFKIEVINLKGDDIEFDMIGIDPA
LANAFRRILIAEVPTMAIEKVLFANNTSIVQDEVLAHRLGLIPIRVDPRLFKYSDKDAPNENNTIVFRLHARCERGKPRLTVKSEALTWLPNGSEFPLVSDKSIPNSKPQ
TYTSFSCSQDKLPEFSKNSIGPKDSDIILARLGPGQEIELEAHAVKGMGKTHAKWSPVATAWYRMLPEVLLLEEIEDELAEELKRKCPVNVFDIEDIAGKKRATVARPRA
CTLCRECIRGDAWEKRVALRRVKDHFIFKIESTGALPPNVLFTEAVKILEDKCERLIAELS