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MELO3C014132 (gene) of Melon (DHL92) v4 genome

Gene IDMELO3C014132
OrganismCucumis melo DHL92 (Melon (DHL92) v4)
DescriptionA2L_zn_ribbon domain-containing protein
Genome locationchr06:35088058..35090045
RNA-Seq ExpressionMELO3C014132
SyntenyMELO3C014132
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsIPR014900 - Viral late gene transcription factor 3 , zinc ribbon


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004149576.1 uncharacterized protein LOC101220311 [Cucumis sativus]1.2e-5588Show/hide
Query:  MEALISNPLITHPTLRRS-----KPRSNSMHNRRRTPAFAAIDGASSLAADSTQVEITWQIFVGAIAGVTPFVVAGIEFSKRIMAQKRCKECGGSGLVLR
        MEAL+SNPLITHPTL  S     KPRSNS+HNRRRTPAFAAIDGAS L ADSTQV+ITWQIFVGAIAGVTPFVVAGIEFSKRI  QKRCKECGGSGLVLR
Subjt:  MEALISNPLITHPTLRRS-----KPRSNSMHNRRRTPAFAAIDGASSLAADSTQVEITWQIFVGAIAGVTPFVVAGIEFSKRIMAQKRCKECGGSGLVLR

Query:  DDDYFRCPDCGGFLPWQSWRRFFWG
        DDDYFRCP+CGGFLPWQSWRRFFWG
Subjt:  DDDYFRCPDCGGFLPWQSWRRFFWG
XP_008449071.1 PREDICTED: uncharacterized protein LOC103491051 [Cucumis melo]6.1e-63100Show/hide
Query:  MEALISNPLITHPTLRRSKPRSNSMHNRRRTPAFAAIDGASSLAADSTQVEITWQIFVGAIAGVTPFVVAGIEFSKRIMAQKRCKECGGSGLVLRDDDYF
        MEALISNPLITHPTLRRSKPRSNSMHNRRRTPAFAAIDGASSLAADSTQVEITWQIFVGAIAGVTPFVVAGIEFSKRIMAQKRCKECGGSGLVLRDDDYF
Subjt:  MEALISNPLITHPTLRRSKPRSNSMHNRRRTPAFAAIDGASSLAADSTQVEITWQIFVGAIAGVTPFVVAGIEFSKRIMAQKRCKECGGSGLVLRDDDYF

Query:  RCPDCGGFLPWQSWRRFFWG
        RCPDCGGFLPWQSWRRFFWG
Subjt:  RCPDCGGFLPWQSWRRFFWG
XP_022935718.1 uncharacterized protein LOC111442262 [Cucurbita moschata]3.9e-4185.29Show/hide
Query:  RSNSMHNRRRTPAFAAIDGAS--SLAADSTQVEITWQIFVGAIAGVTPFVVAGIEFSKRIMAQKRCKECGGSGLVLRDDDYFRCPDCGGFLPWQSWRRFF
        RSNS++ RRRTP FAAIDGAS  + AAD TQVEITWQI VGAIAGVTPFVVAGIEFSKRI+AQKRCKECGGSGLVL D DYFRCP+CGGFLPWQSWRRFF
Subjt:  RSNSMHNRRRTPAFAAIDGAS--SLAADSTQVEITWQIFVGAIAGVTPFVVAGIEFSKRIMAQKRCKECGGSGLVLRDDDYFRCPDCGGFLPWQSWRRFF

Query:  WG
         G
Subjt:  WG
XP_023005598.1 uncharacterized protein LOC111498537 [Cucurbita maxima]3.9e-4185.29Show/hide
Query:  RSNSMHNRRRTPAFAAIDGAS--SLAADSTQVEITWQIFVGAIAGVTPFVVAGIEFSKRIMAQKRCKECGGSGLVLRDDDYFRCPDCGGFLPWQSWRRFF
        RSNS++ RRRTP FAAIDGAS  + AAD TQVEITWQI VGAIAGVTPFVVAGIEFSKRI+AQKRCKECGGSGLVL D DYFRCP+CGGFLPWQSWRRFF
Subjt:  RSNSMHNRRRTPAFAAIDGAS--SLAADSTQVEITWQIFVGAIAGVTPFVVAGIEFSKRIMAQKRCKECGGSGLVLRDDDYFRCPDCGGFLPWQSWRRFF

Query:  WG
         G
Subjt:  WG
XP_038903334.1 uncharacterized protein LOC120089955 [Benincasa hispida]2.8e-4782.03Show/hide
Query:  MEAL----ISNPLITHPTLRRS----KPRSNSMHNRRRTPAFAAIDGASSLAADSTQVEITWQIFVGAIAGVTPFVVAGIEFSKRIMAQKRCKECGGSGL
        MEAL    ISNPL   P  R S    KPRSNS+ NRRRT  +AAIDGA SL ADS QVEITWQIFVGAIAGVTPFVVAGIEFSKRIMAQKRCKECGGSGL
Subjt:  MEAL----ISNPLITHPTLRRS----KPRSNSMHNRRRTPAFAAIDGASSLAADSTQVEITWQIFVGAIAGVTPFVVAGIEFSKRIMAQKRCKECGGSGL

Query:  VLRDDDYFRCPDCGGFLPWQSWRRFFWG
        VLRDDDYFRCP+CGGFLPWQSWRRFFWG
Subjt:  VLRDDDYFRCPDCGGFLPWQSWRRFFWG
TrEMBL top hitse value%identityAlignment
A0A0A0L7H1 Uncharacterized protein6.0e-5688Show/hide
Query:  MEALISNPLITHPTLRRS-----KPRSNSMHNRRRTPAFAAIDGASSLAADSTQVEITWQIFVGAIAGVTPFVVAGIEFSKRIMAQKRCKECGGSGLVLR
        MEAL+SNPLITHPTL  S     KPRSNS+HNRRRTPAFAAIDGAS L ADSTQV+ITWQIFVGAIAGVTPFVVAGIEFSKRI  QKRCKECGGSGLVLR
Subjt:  MEALISNPLITHPTLRRS-----KPRSNSMHNRRRTPAFAAIDGASSLAADSTQVEITWQIFVGAIAGVTPFVVAGIEFSKRIMAQKRCKECGGSGLVLR

Query:  DDDYFRCPDCGGFLPWQSWRRFFWG
        DDDYFRCP+CGGFLPWQSWRRFFWG
Subjt:  DDDYFRCPDCGGFLPWQSWRRFFWG
A0A1S3BLU9 uncharacterized protein LOC1034910513.0e-63100Show/hide
Query:  MEALISNPLITHPTLRRSKPRSNSMHNRRRTPAFAAIDGASSLAADSTQVEITWQIFVGAIAGVTPFVVAGIEFSKRIMAQKRCKECGGSGLVLRDDDYF
        MEALISNPLITHPTLRRSKPRSNSMHNRRRTPAFAAIDGASSLAADSTQVEITWQIFVGAIAGVTPFVVAGIEFSKRIMAQKRCKECGGSGLVLRDDDYF
Subjt:  MEALISNPLITHPTLRRSKPRSNSMHNRRRTPAFAAIDGASSLAADSTQVEITWQIFVGAIAGVTPFVVAGIEFSKRIMAQKRCKECGGSGLVLRDDDYF

Query:  RCPDCGGFLPWQSWRRFFWG
        RCPDCGGFLPWQSWRRFFWG
Subjt:  RCPDCGGFLPWQSWRRFFWG
A0A6J1DN65 uncharacterized protein LOC1110221351.2e-3567.77Show/hide
Query:  MEALISNPLITHPTLRRSKPRSNSMHNRRRTPAFAAI-DGASSLAADSTQVEITWQIFVGAIAGVTPFVVAGIEFSKRIMAQKRCKECGGSGLVLRDDDY
        MEAL     I++   R +KP  NS+ NRR     AAI D AS   AD +Q++ITWQI VGAIAGVTPFVVAGIEF+KRI+AQ+RC+ECGGSGLVL +DDY
Subjt:  MEALISNPLITHPTLRRSKPRSNSMHNRRRTPAFAAI-DGASSLAADSTQVEITWQIFVGAIAGVTPFVVAGIEFSKRIMAQKRCKECGGSGLVLRDDDY

Query:  FRCPDCGGFLPWQSWRRFFWG
        FRCP CGGFLPWQSW+RFFWG
Subjt:  FRCPDCGGFLPWQSWRRFFWG
A0A6J1FBA7 uncharacterized protein LOC1114422621.9e-4185.29Show/hide
Query:  RSNSMHNRRRTPAFAAIDGAS--SLAADSTQVEITWQIFVGAIAGVTPFVVAGIEFSKRIMAQKRCKECGGSGLVLRDDDYFRCPDCGGFLPWQSWRRFF
        RSNS++ RRRTP FAAIDGAS  + AAD TQVEITWQI VGAIAGVTPFVVAGIEFSKRI+AQKRCKECGGSGLVL D DYFRCP+CGGFLPWQSWRRFF
Subjt:  RSNSMHNRRRTPAFAAIDGAS--SLAADSTQVEITWQIFVGAIAGVTPFVVAGIEFSKRIMAQKRCKECGGSGLVLRDDDYFRCPDCGGFLPWQSWRRFF

Query:  WG
         G
Subjt:  WG
A0A6J1L2M2 uncharacterized protein LOC1114985371.9e-4185.29Show/hide
Query:  RSNSMHNRRRTPAFAAIDGAS--SLAADSTQVEITWQIFVGAIAGVTPFVVAGIEFSKRIMAQKRCKECGGSGLVLRDDDYFRCPDCGGFLPWQSWRRFF
        RSNS++ RRRTP FAAIDGAS  + AAD TQVEITWQI VGAIAGVTPFVVAGIEFSKRI+AQKRCKECGGSGLVL D DYFRCP+CGGFLPWQSWRRFF
Subjt:  RSNSMHNRRRTPAFAAIDGAS--SLAADSTQVEITWQIFVGAIAGVTPFVVAGIEFSKRIMAQKRCKECGGSGLVLRDDDYFRCPDCGGFLPWQSWRRFF

Query:  WG
         G
Subjt:  WG
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT5G55570.1 unknown protein9.2e-3360Show/hide
Query:  PTLRRSKPRSNSM--HNRRRTPAFAAIDGASSLAADSTQVEITWQIFVGAIAGVTPFVVAGIEFSKRIMAQKRCKECGGSGLVLRDDDYFRCPDCGGFLP
        P  RRS+     M   + RR    +A+   +   A++ + EITWQI VG IAG+ PFVVAG+EFSKRI+AQKRC+ECGG+GLV RD  YFRCP+CGGFLP
Subjt:  PTLRRSKPRSNSM--HNRRRTPAFAAIDGASSLAADSTQVEITWQIFVGAIAGVTPFVVAGIEFSKRIMAQKRCKECGGSGLVLRDDDYFRCPDCGGFLP

Query:  WQSWRRFFWG
        WQSWRRFF G
Subjt:  WQSWRRFFWG

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAAGCATTAATTTCCAACCCTCTTATTACCCATCCCACTCTTCGTCGTTCCAAACCGCGCTCGAATTCGATGCATAATCGAAGACGAACACCCGCGTTTGCCGCCAT
TGACGGTGCTTCTTCGCTTGCAGCTGACTCCACTCAGGTTGAAATCACATGGCAAATTTTCGTTGGAGCGATTGCTGGAGTGACGCCATTTGTGGTGGCCGGAATCGAAT
TCAGCAAGAGAATTATGGCGCAAAAGAGATGTAAAGAATGCGGTGGTTCTGGGCTTGTTCTTAGAGATGATGACTACTTTCGTTGCCCGGACTGTGGTGGTTTTTTGCCA
TGGCAGTCATGGAGGCGATTCTTTTGGGGATAA
mRNA sequenceShow/hide mRNA sequence
GTACTAAGGCTATGGATTCTCCATTCAACTGTTTCCAGACATGAATTCATTCTCTGGCCAGATTTAACCAAATCCTCCATTCAAATATTTCATAAATACATCTTTACAAC
AACATCCTAATCTTTGGGATATTTACATTTCAATAAACTAATCAATACCCACAAGTAAGTTTGTGGTTGTCGCGAACTGGATTGAAAACCCATCCACTCGAATCACTACC
TTCTCTATTTCCCTCATTCTCTCTTCCTTCATCCTTCTCCAATCCAATCATGGAAGCATTAATTTCCAACCCTCTTATTACCCATCCCACTCTTCGTCGTTCCAAACCGC
GCTCGAATTCGATGCATAATCGAAGACGAACACCCGCGTTTGCCGCCATTGACGGTGCTTCTTCGCTTGCAGCTGACTCCACTCAGGTTGAAATCACATGGCAAATTTTC
GTTGGAGCGATTGCTGGAGTGACGCCATTTGTGGTGGCCGGAATCGAATTCAGCAAGAGAATTATGGCGCAAAAGAGATGTAAAGAATGCGGTGGTTCTGGGCTTGTTCT
TAGAGATGATGACTACTTTCGTTGCCCGGACTGTGGTGGTTTTTTGCCATGGCAGTCATGGAGGCGATTCTTTTGGGGATAAAGAAGACACTTAACAAGATATGTCTCTT
TTGAAGCTGTATTAATTACACTCATATTTCAAAGAAAGTGGTTCAGGATTTTCTTCGTTGATTTCCAAGCAAGACGAGGAACAAAGGATCTGATCTTATCCGTTCATTAA
GTGTATGCATTTGAGGTTAGAGCTAATTACAAGTTCACCACGTTTCTCATCAAATTACAAGCTCAATCAAGTATTCAAATGTTGCTAAATGATTGTTTACGAGGTTACAT
TTCTAGCATGTCGTTCTTGAAATGTCATTTTCTCTCACATAGTTAATAACATGTATAAAAGATTTAATATTTTTTAACCTATCAACTTTAGTTTTTAAGTCTGGTACTGG
TTTATTTATACAATAAAGCTAGGCATTTCTTCCCCAGTGCTTGAGATGTGCAGAGCCAAGCATGTTGAATTAGAAACTCCATTAATTTGTATTAAGTGGGATATTGCGAA
ACAAATTACGCACGTCCATTTTGGTGTTTATGCATTTGTATATAACTCACGGAGTCTGTAAGCAACTATATGCGATTCTTTGTTTTTGTGTTATTTTT
Protein sequenceShow/hide protein sequence
MEALISNPLITHPTLRRSKPRSNSMHNRRRTPAFAAIDGASSLAADSTQVEITWQIFVGAIAGVTPFVVAGIEFSKRIMAQKRCKECGGSGLVLRDDDYFRCPDCGGFLP
WQSWRRFFWG