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MELO3C014207 (gene) of Melon (DHL92) v4 genome

Gene IDMELO3C014207
OrganismCucumis melo DHL92 (Melon (DHL92) v4)
DescriptionPMD domain-containing protein
Genome locationchr08:29754216..29754767
RNA-Seq ExpressionMELO3C014207
SyntenyMELO3C014207
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0047222.1 putative mitochondrial protein [Cucumis melo var. makuwa]2.8e-99100Show/hide
Query:  ERFLSGVRHLVILSDRNQPKEDGLSLIVEKPWADAFADHWPRLDNNSVLSRLSVEIPLSEGKSARVLQSSIHNEALNSVRALTLGQRLIEGQTRWGTVTK
        ERFLSGVRHLVILSDRNQPKEDGLSLIVEKPWADAFADHWPRLDNNSVLSRLSVEIPLSEGKSARVLQSSIHNEALNSVRALTLGQRLIEGQTRWGTVTK
Subjt:  ERFLSGVRHLVILSDRNQPKEDGLSLIVEKPWADAFADHWPRLDNNSVLSRLSVEIPLSEGKSARVLQSSIHNEALNSVRALTLGQRLIEGQTRWGTVTK

Query:  IPGEFCFIDCYWEWLELVVGRNTRLLYSTRLYGAITTSLYTYDRNSDVVRAFCEAWCPSTNTLHTMAGELSTTQWVSD
        IPGEFCFIDCYWEWLELVVGRNTRLLYSTRLYGAITTSLYTYDRNSDVVRAFCEAWCPSTNTLHTMAGELSTTQWVSD
Subjt:  IPGEFCFIDCYWEWLELVVGRNTRLLYSTRLYGAITTSLYTYDRNSDVVRAFCEAWCPSTNTLHTMAGELSTTQWVSD

KAA0047478.1 hypothetical protein E6C27_scaffold498G00950 [Cucumis melo var. makuwa]6.6e-9392.22Show/hide
Query:  MVYFTERFLSGVRHLVILSDRNQPKEDGLSLIVEKPWADAFADHWPRLDNNSVLSRLSVEIPLSEGKSARVLQSSIHNEALNSVRALTLGQRLIEGQTRW
        MVYFTERFLSGVRHLVILSDRNQP+EDGLSLIVEKPWA AFADHWPRLDNNSVL RLSVE+PLSEGKSA VLQSSIHNEA NS RALTLGQRLIEGQTRW
Subjt:  MVYFTERFLSGVRHLVILSDRNQPKEDGLSLIVEKPWADAFADHWPRLDNNSVLSRLSVEIPLSEGKSARVLQSSIHNEALNSVRALTLGQRLIEGQTRW

Query:  GTVTKIPGEFCFIDCYWEWLELVVGRNTRLLYSTRLYGAITTSLYTYDRNSDVVRAFCEAWCPSTNTLHTMAGELSTTQW
        GTVTK+PGEFCF DCYWEWLELVVGRNTRLLYSTRLYGA+T SLYTYDRNSDVVRAFCEAWCPSTNTLHTMAGELS + W
Subjt:  GTVTKIPGEFCFIDCYWEWLELVVGRNTRLLYSTRLYGAITTSLYTYDRNSDVVRAFCEAWCPSTNTLHTMAGELSTTQW

KAA0050516.1 hypothetical protein E6C27_scaffold175G001600 [Cucumis melo var. makuwa]3.6e-9190.56Show/hide
Query:  MVYFTERFLSGVRHLVILSDRNQPKEDGLSLIVEKPWADAFADHWPRLDNNSVLSRLSVEIPLSEGKSARVLQSSIHNEALNSVRALTLGQRLIEGQTRW
        MVYFTERFLSGVRHLVILSDRNQP+EDGLSLI+EKPWA AFADHWPRLDNNSVL RLSVEIPLSEGKSA +LQSSIHNEA NS RALTLGQRLIEGQTRW
Subjt:  MVYFTERFLSGVRHLVILSDRNQPKEDGLSLIVEKPWADAFADHWPRLDNNSVLSRLSVEIPLSEGKSARVLQSSIHNEALNSVRALTLGQRLIEGQTRW

Query:  GTVTKIPGEFCFIDCYWEWLELVVGRNTRLLYSTRLYGAITTSLYTYDRNSDVVRAFCEAWCPSTNTLHTMAGELSTTQW
        GT+TK+PGEFCF DCYWEWLELVVGRNTRLLYSTRLYG +TTSLYTYDRNSDVVRAF EAWCPSTNTLHTMAGELS + W
Subjt:  GTVTKIPGEFCFIDCYWEWLELVVGRNTRLLYSTRLYGAITTSLYTYDRNSDVVRAFCEAWCPSTNTLHTMAGELSTTQW

KAA0065375.1 hypothetical protein E6C27_scaffold17G00370 [Cucumis melo var. makuwa]2.1e-9191.11Show/hide
Query:  MVYFTERFLSGVRHLVILSDRNQPKEDGLSLIVEKPWADAFADHWPRLDNNSVLSRLSVEIPLSEGKSARVLQSSIHNEALNSVRALTLGQRLIEGQTRW
        MVYFTERFLSGVRHLVILSDRNQP+EDGLSLIVEKPWA AFADHWPRLDNNSVL RLSVEIPLSEGKSA +LQSSIH+EA NS RALTLGQRLIEGQTRW
Subjt:  MVYFTERFLSGVRHLVILSDRNQPKEDGLSLIVEKPWADAFADHWPRLDNNSVLSRLSVEIPLSEGKSARVLQSSIHNEALNSVRALTLGQRLIEGQTRW

Query:  GTVTKIPGEFCFIDCYWEWLELVVGRNTRLLYSTRLYGAITTSLYTYDRNSDVVRAFCEAWCPSTNTLHTMAGELSTTQW
        GTVTK+P EFCF DCYWEWLELVVGRNTRLLYSTRLYGA+T SLYTYDRNSDVVRAFCEAWCPSTNTLHTMAGELS + W
Subjt:  GTVTKIPGEFCFIDCYWEWLELVVGRNTRLLYSTRLYGAITTSLYTYDRNSDVVRAFCEAWCPSTNTLHTMAGELSTTQW

TYK19639.1 hypothetical protein E5676_scaffold242G00260 [Cucumis melo var. makuwa]5.3e-9090Show/hide
Query:  MVYFTERFLSGVRHLVILSDRNQPKEDGLSLIVEKPWADAFADHWPRLDNNSVLSRLSVEIPLSEGKSARVLQSSIHNEALNSVRALTLGQRLIEGQTRW
        MVYFTERFLSGVRHLVILSDRNQP+EDGLSLIVEK WA AFADHWPRLDNNSVL RLSVE+PLSEGKSA VLQSSIHNEA NS RALTLGQRLIEGQTRW
Subjt:  MVYFTERFLSGVRHLVILSDRNQPKEDGLSLIVEKPWADAFADHWPRLDNNSVLSRLSVEIPLSEGKSARVLQSSIHNEALNSVRALTLGQRLIEGQTRW

Query:  GTVTKIPGEFCFIDCYWEWLELVVGRNTRLLYSTRLYGAITTSLYTYDRNSDVVRAFCEAWCPSTNTLHTMAGELSTTQW
        GTVTK+PGEFCF DCYWEWLELVVGRNTRLLYST LY  +T SLYTYDRNSDVVRAFCEAWCPSTNTLHTMAGELS + W
Subjt:  GTVTKIPGEFCFIDCYWEWLELVVGRNTRLLYSTRLYGAITTSLYTYDRNSDVVRAFCEAWCPSTNTLHTMAGELSTTQW

TrEMBL top hitse value%identityAlignment
A0A5A7TFC8 PMD domain-containing protein2.5e-9090Show/hide
Query:  MVYFTERFLSGVRHLVILSDRNQPKEDGLSLIVEKPWADAFADHWPRLDNNSVLSRLSVEIPLSEGKSARVLQSSIHNEALNSVRALTLGQRLIEGQTRW
        MVYFTERFLSGVRHLVILSDRNQP+EDGLSLIVEK WA AFADHWPRLDNNSVL RLSVE+PLSEGKSA VLQSSIHNEA NS RALTLGQRLIEGQTRW
Subjt:  MVYFTERFLSGVRHLVILSDRNQPKEDGLSLIVEKPWADAFADHWPRLDNNSVLSRLSVEIPLSEGKSARVLQSSIHNEALNSVRALTLGQRLIEGQTRW

Query:  GTVTKIPGEFCFIDCYWEWLELVVGRNTRLLYSTRLYGAITTSLYTYDRNSDVVRAFCEAWCPSTNTLHTMAGELSTTQW
        GTVTK+PGEFCF DCYWEWLELVVGRNTRLLYST LY  +T SLYTYDRNSDVVRAFCEAWCPSTNTLHTMAGELS + W
Subjt:  GTVTKIPGEFCFIDCYWEWLELVVGRNTRLLYSTRLYGAITTSLYTYDRNSDVVRAFCEAWCPSTNTLHTMAGELSTTQW

A0A5A7TUT6 Putative mitochondrial protein1.3e-99100Show/hide
Query:  ERFLSGVRHLVILSDRNQPKEDGLSLIVEKPWADAFADHWPRLDNNSVLSRLSVEIPLSEGKSARVLQSSIHNEALNSVRALTLGQRLIEGQTRWGTVTK
        ERFLSGVRHLVILSDRNQPKEDGLSLIVEKPWADAFADHWPRLDNNSVLSRLSVEIPLSEGKSARVLQSSIHNEALNSVRALTLGQRLIEGQTRWGTVTK
Subjt:  ERFLSGVRHLVILSDRNQPKEDGLSLIVEKPWADAFADHWPRLDNNSVLSRLSVEIPLSEGKSARVLQSSIHNEALNSVRALTLGQRLIEGQTRWGTVTK

Query:  IPGEFCFIDCYWEWLELVVGRNTRLLYSTRLYGAITTSLYTYDRNSDVVRAFCEAWCPSTNTLHTMAGELSTTQWVSD
        IPGEFCFIDCYWEWLELVVGRNTRLLYSTRLYGAITTSLYTYDRNSDVVRAFCEAWCPSTNTLHTMAGELSTTQWVSD
Subjt:  IPGEFCFIDCYWEWLELVVGRNTRLLYSTRLYGAITTSLYTYDRNSDVVRAFCEAWCPSTNTLHTMAGELSTTQWVSD

A0A5A7TX42 Uncharacterized protein3.2e-9392.22Show/hide
Query:  MVYFTERFLSGVRHLVILSDRNQPKEDGLSLIVEKPWADAFADHWPRLDNNSVLSRLSVEIPLSEGKSARVLQSSIHNEALNSVRALTLGQRLIEGQTRW
        MVYFTERFLSGVRHLVILSDRNQP+EDGLSLIVEKPWA AFADHWPRLDNNSVL RLSVE+PLSEGKSA VLQSSIHNEA NS RALTLGQRLIEGQTRW
Subjt:  MVYFTERFLSGVRHLVILSDRNQPKEDGLSLIVEKPWADAFADHWPRLDNNSVLSRLSVEIPLSEGKSARVLQSSIHNEALNSVRALTLGQRLIEGQTRW

Query:  GTVTKIPGEFCFIDCYWEWLELVVGRNTRLLYSTRLYGAITTSLYTYDRNSDVVRAFCEAWCPSTNTLHTMAGELSTTQW
        GTVTK+PGEFCF DCYWEWLELVVGRNTRLLYSTRLYGA+T SLYTYDRNSDVVRAFCEAWCPSTNTLHTMAGELS + W
Subjt:  GTVTKIPGEFCFIDCYWEWLELVVGRNTRLLYSTRLYGAITTSLYTYDRNSDVVRAFCEAWCPSTNTLHTMAGELSTTQW

A0A5A7U8L3 PMD domain-containing protein1.8e-9190.56Show/hide
Query:  MVYFTERFLSGVRHLVILSDRNQPKEDGLSLIVEKPWADAFADHWPRLDNNSVLSRLSVEIPLSEGKSARVLQSSIHNEALNSVRALTLGQRLIEGQTRW
        MVYFTERFLSGVRHLVILSDRNQP+EDGLSLI+EKPWA AFADHWPRLDNNSVL RLSVEIPLSEGKSA +LQSSIHNEA NS RALTLGQRLIEGQTRW
Subjt:  MVYFTERFLSGVRHLVILSDRNQPKEDGLSLIVEKPWADAFADHWPRLDNNSVLSRLSVEIPLSEGKSARVLQSSIHNEALNSVRALTLGQRLIEGQTRW

Query:  GTVTKIPGEFCFIDCYWEWLELVVGRNTRLLYSTRLYGAITTSLYTYDRNSDVVRAFCEAWCPSTNTLHTMAGELSTTQW
        GT+TK+PGEFCF DCYWEWLELVVGRNTRLLYSTRLYG +TTSLYTYDRNSDVVRAF EAWCPSTNTLHTMAGELS + W
Subjt:  GTVTKIPGEFCFIDCYWEWLELVVGRNTRLLYSTRLYGAITTSLYTYDRNSDVVRAFCEAWCPSTNTLHTMAGELSTTQW

A0A5A7VHW8 PMD domain-containing protein1.0e-9191.11Show/hide
Query:  MVYFTERFLSGVRHLVILSDRNQPKEDGLSLIVEKPWADAFADHWPRLDNNSVLSRLSVEIPLSEGKSARVLQSSIHNEALNSVRALTLGQRLIEGQTRW
        MVYFTERFLSGVRHLVILSDRNQP+EDGLSLIVEKPWA AFADHWPRLDNNSVL RLSVEIPLSEGKSA +LQSSIH+EA NS RALTLGQRLIEGQTRW
Subjt:  MVYFTERFLSGVRHLVILSDRNQPKEDGLSLIVEKPWADAFADHWPRLDNNSVLSRLSVEIPLSEGKSARVLQSSIHNEALNSVRALTLGQRLIEGQTRW

Query:  GTVTKIPGEFCFIDCYWEWLELVVGRNTRLLYSTRLYGAITTSLYTYDRNSDVVRAFCEAWCPSTNTLHTMAGELSTTQW
        GTVTK+P EFCF DCYWEWLELVVGRNTRLLYSTRLYGA+T SLYTYDRNSDVVRAFCEAWCPSTNTLHTMAGELS + W
Subjt:  GTVTKIPGEFCFIDCYWEWLELVVGRNTRLLYSTRLYGAITTSLYTYDRNSDVVRAFCEAWCPSTNTLHTMAGELSTTQW

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTTTACTTCACAGAACGATTCTTGTCTGGAGTTCGACACCTCGTAATACTTTCTGATAGAAATCAACCCAAAGAAGATGGACTTAGTCTCATTGTGGAGAAGCCATG
GGCTGACGCTTTTGCAGATCATTGGCCACGCTTAGACAACAACTCAGTTCTTTCTAGATTATCCGTGGAGATACCTTTGTCTGAGGGAAAAAGCGCACGGGTCTTGCAAT
CTTCTATCCACAATGAGGCTCTTAATTCTGTCAGAGCTCTCACTCTTGGACAACGTTTAATTGAAGGCCAAACACGTTGGGGTACTGTGACTAAGATCCCTGGAGAGTTC
TGCTTTATTGACTGCTACTGGGAGTGGTTGGAGCTTGTAGTTGGTCGAAATACGCGACTTCTTTATAGTACTCGTTTATATGGTGCCATAACAACTTCTTTATACACTTA
CGATCGTAACAGTGATGTTGTTCGAGCATTTTGTGAAGCATGGTGTCCTTCGACTAATACTCTTCATACTATGGCGGGCGAGTTATCAACAACACAATGGGTAAGTGATT
AG
mRNA sequenceShow/hide mRNA sequence
ATGGTTTACTTCACAGAACGATTCTTGTCTGGAGTTCGACACCTCGTAATACTTTCTGATAGAAATCAACCCAAAGAAGATGGACTTAGTCTCATTGTGGAGAAGCCATG
GGCTGACGCTTTTGCAGATCATTGGCCACGCTTAGACAACAACTCAGTTCTTTCTAGATTATCCGTGGAGATACCTTTGTCTGAGGGAAAAAGCGCACGGGTCTTGCAAT
CTTCTATCCACAATGAGGCTCTTAATTCTGTCAGAGCTCTCACTCTTGGACAACGTTTAATTGAAGGCCAAACACGTTGGGGTACTGTGACTAAGATCCCTGGAGAGTTC
TGCTTTATTGACTGCTACTGGGAGTGGTTGGAGCTTGTAGTTGGTCGAAATACGCGACTTCTTTATAGTACTCGTTTATATGGTGCCATAACAACTTCTTTATACACTTA
CGATCGTAACAGTGATGTTGTTCGAGCATTTTGTGAAGCATGGTGTCCTTCGACTAATACTCTTCATACTATGGCGGGCGAGTTATCAACAACACAATGGGTAAGTGATT
AG
Protein sequenceShow/hide protein sequence
MVYFTERFLSGVRHLVILSDRNQPKEDGLSLIVEKPWADAFADHWPRLDNNSVLSRLSVEIPLSEGKSARVLQSSIHNEALNSVRALTLGQRLIEGQTRWGTVTKIPGEF
CFIDCYWEWLELVVGRNTRLLYSTRLYGAITTSLYTYDRNSDVVRAFCEAWCPSTNTLHTMAGELSTTQWVSD