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MELO3C014768 (gene) of Melon (DHL92) v4 genome

Gene IDMELO3C014768
OrganismCucumis melo DHL92 (Melon (DHL92) v4)
DescriptionDual-specificity RNA methyltransferase RlmN isoform X1
Genome locationchr04:25441112..25447839
RNA-Seq ExpressionMELO3C014768
SyntenyMELO3C014768
Gene Ontology termsGO:0030488 - tRNA methylation (biological process)
GO:0070475 - rRNA base methylation (biological process)
GO:0005737 - cytoplasm (cellular component)
GO:0008173 - RNA methyltransferase activity (molecular function)
GO:0046872 - metal ion binding (molecular function)
GO:0051539 - 4 iron, 4 sulfur cluster binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0045130.1 hypothetical protein E6C27_scaffold30G001290 [Cucumis melo var. makuwa]2.5e-0540.78Show/hide
Query:  IGARDAPRARPCPPKAEKSPEASRTFYDGRDDSGRLQKTRERPRRGWNAREQPGWPMSVRAQPRSLQTRPEASMSVQRHTMTVRSVMVGPECSRVKCKGP
        +GA     ARPC   ++K+ +    F  G      +QK  E PRR  N  +      S  A PR +QT PEASM++ + TMTVRSVM  P+CS+V C G 
Subjt:  IGARDAPRARPCPPKAEKSPEASRTFYDGRDDSGRLQKTRERPRRGWNAREQPGWPMSVRAQPRSLQTRPEASMSVQRHTMTVRSVMVGPECSRVKCKGP

Query:  NRL
         R+
Subjt:  NRL
TYK19896.1 dual-specificity RNA methyltransferase RlmN isoform X1 [Cucumis melo var. makuwa]4.7e-3393.75Show/hide
Query:  RARPCPPKAEKSPEASRTFYDGRDDSGRLQKTRERPRRGWNAREQPGWPMSVRAQPRSLQTRPEASMSVQRHTMTVRSVM
        RARPCP KAEKSP+ASRTFYDGRD+SGRLQKTRERPRRGWNAREQPGWPMSVRAQPRSLQTRP+ASMSVQRHTM+VRSVM
Subjt:  RARPCPPKAEKSPEASRTFYDGRDDSGRLQKTRERPRRGWNAREQPGWPMSVRAQPRSLQTRPEASMSVQRHTMTVRSVM
TrEMBL top hitse value%identityAlignment
A0A5A7TPM2 Uncharacterized protein1.2e-0540.78Show/hide
Query:  IGARDAPRARPCPPKAEKSPEASRTFYDGRDDSGRLQKTRERPRRGWNAREQPGWPMSVRAQPRSLQTRPEASMSVQRHTMTVRSVMVGPECSRVKCKGP
        +GA     ARPC   ++K+ +    F  G      +QK  E PRR  N  +      S  A PR +QT PEASM++ + TMTVRSVM  P+CS+V C G 
Subjt:  IGARDAPRARPCPPKAEKSPEASRTFYDGRDDSGRLQKTRERPRRGWNAREQPGWPMSVRAQPRSLQTRPEASMSVQRHTMTVRSVMVGPECSRVKCKGP

Query:  NRL
         R+
Subjt:  NRL
A0A5D3D8I4 Dual-specificity RNA methyltransferase RlmN isoform X12.3e-3393.75Show/hide
Query:  RARPCPPKAEKSPEASRTFYDGRDDSGRLQKTRERPRRGWNAREQPGWPMSVRAQPRSLQTRPEASMSVQRHTMTVRSVM
        RARPCP KAEKSP+ASRTFYDGRD+SGRLQKTRERPRRGWNAREQPGWPMSVRAQPRSLQTRP+ASMSVQRHTM+VRSVM
Subjt:  RARPCPPKAEKSPEASRTFYDGRDDSGRLQKTRERPRRGWNAREQPGWPMSVRAQPRSLQTRPEASMSVQRHTMTVRSVM
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCGCACAGGCAGCAGCGCATGGCACGACGGCCAACCCAGCATGCGCACACGCAGGCGCACACGCCCACCAGATGGCCGCCCAGGCACGCACGGGCAAGGCGCG
CGCGCCCCGCACGCGATAGGCGCGCGCGACGCCCCGCGCGCGCGCCCATGTCCGCCCAAGGCCGAGAAGAGCCCAGAAGCTTCTAGAACTTTCTATGACGGTCGG
GATGACTCGGGAAGACTCCAGAAGACCCGCGAACGCCCGCGAAGGGGCTGGAATGCGCGCGAGCAGCCCGGATGGCCTATGTCGGTGCGCGCCCAGCCGAGAAGC
CTCCAGACACGTCCAGAAGCTTCTATGTCGGTGCAGAGACATACGATGACGGTCAGAAGTGTCATGGTAGGTCCAGAATGTTCTAGAGTCAAATGTAAAGGGCCA
AACCGCCTTGGATCTTCTAGATAG
mRNA sequenceShow/hide mRNA sequence
ATGACACTGGCGTGTGCCTCTCGAGGACAGCCACAACATGTGTGCCACGGACAGCCCAGAAGTATGGCACCATGACACGCCCGGATGCCCCTTTGGTACGGCCAT
TGGCCCCAAGCACCAATGCCCAGCACAGCCCATGCGCACGGGCACATGCGCATGGCCAGGCGGCAAGCCCAGCATGCACGCGGACAGCCGCCCATGCTCGCCCAG
GCAAGGCGCGCGCGCAGCATGCGCGCGCGCCCCTGACATGTACAGCTGCACCCGACACCAGCACTGCCTAGACAGCCCATGCGCACAGGCAGCAGCGCATGGCAC
GACGGCCAACCCAGCATGCGCACACGCAGGCGCACACGCCCACCAGATGGCCGCCCAGGCACGCACGGGCAAGGCGCGCGCGCCCCGCACGCGATAGGCGCGCGC
GACGCCCCGCGCGCGCGCCCATGTCCGCCCAAGGCCGAGAAGAGCCCAGAAGCTTCTAGAACTTTCTATGACGGTCGGGATGACTCGGGAAGACTCCAGAAGACC
CGCGAACGCCCGCGAAGGGGCTGGAATGCGCGCGAGCAGCCCGGATGGCCTATGTCGGTGCGCGCCCAGCCGAGAAGCCTCCAGACACGTCCAGAAGCTTCTATG
TCGGTGCAGAGACATACGATGACGGTCAGAAGTGTCATGGTAGGTCCAGAATGTTCTAGAGTCAAATGTAAAGGGCCAAACCGCCTTGGATCTTCTAGATAG
Protein sequenceShow/hide protein sequence
MRTGSSAWHDGQPSMRTRRRTRPPDGRPGTHGQGARAPHAIGARDAPRARPCPPKAEKSPEASRTFYDGRDDSGRLQKTRERPRRGWNAREQPGWPMSVRAQPRS
LQTRPEASMSVQRHTMTVRSVMVGPECSRVKCKGPNRLGSSR