; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

MELO3C014875 (gene) of Melon (DHL92) v4 genome

Gene IDMELO3C014875
OrganismCucumis melo DHL92 (Melon (DHL92) v4)
Description30S ribosomal protein S21, chloroplastic-like
Genome locationchr06:21285033..21287060
RNA-Seq ExpressionMELO3C014875
SyntenyMELO3C014875
Gene Ontology termsGO:0006412 - translation (biological process)
GO:0005840 - ribosome (cellular component)
GO:0003735 - structural constituent of ribosome (molecular function)
InterPro domainsIPR001911 - Ribosomal protein S21
IPR038380 - Ribosomal protein S21 superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
AAL35983.1 ribosome-like protein, partial [Cucumis sativus]7.6e-8995.6Show/hide
Query:  MASLSSFFSFLLPSKPPPPKPHQPLIASSPSPPNHAAAQFQTLKSRDGSVALKPQQGPNHSEPLSAELASVICPSLAFANTMFFRSAYNVQVIVDDNEPE
        MASLSSFFSFLLPSKPPPPKPHQP IASSPSP NHAA QFQTLKSRDGSVAL PQQGPNHSEPLSAELASVICPSLA+ANTMFFRSAYNVQV+VDDNEPE
Subjt:  MASLSSFFSFLLPSKPPPPKPHQPLIASSPSPPNHAAAQFQTLKSRDGSVALKPQQGPNHSEPLSAELASVICPSLAFANTMFFRSAYNVQVIVDDNEPE

Query:  ERLLNRFRREVMRAGVIQECKRRRFFENTQDVRKRKTREAAKRNRRRRPQARFTPQNKQDVPATKQEADDDNWDLPEEADIP
        ERLLNRFRREVMRAGVIQECKRRRFFENTQDVRKRKTREAAKRNRRRRPQARFTPQNKQDVPATKQEADDDNWDLPE+ DIP
Subjt:  ERLLNRFRREVMRAGVIQECKRRRFFENTQDVRKRKTREAAKRNRRRRPQARFTPQNKQDVPATKQEADDDNWDLPEEADIP
KAA0042889.1 hypothetical protein E6C27_scaffold44G004060 [Cucumis melo var. makuwa]3.9e-9399.45Show/hide
Query:  MASLSSFFSFLLPSKPPPPKPHQPLIASSPSPPNHAAAQFQTLKSRDGSVALKPQQGPNHSEPLSAELASVICPSLAFANTMFFRSAYNVQVIVDDNEPE
        MASLSSFFSFLLPSKPPPPKPHQPLIASSPSPPNHAAAQFQTLKSRDGSVALKPQQGPNHSEPLSAELASVICPSLAFANTMFFRSAYNVQVIVDDNEPE
Subjt:  MASLSSFFSFLLPSKPPPPKPHQPLIASSPSPPNHAAAQFQTLKSRDGSVALKPQQGPNHSEPLSAELASVICPSLAFANTMFFRSAYNVQVIVDDNEPE

Query:  ERLLNRFRREVMRAGVIQECKRRRFFENTQDVRKRKTREAAKRNRRRRPQARFTPQNKQDVPATKQEADDDNWDLPEEADIPY
        ERLLNRFRREVMRAGVIQECKRRRFFENTQDVRKRKTREAAKRNRRRRPQARFTPQNKQDVPATKQEADDDNWDLPEE DIPY
Subjt:  ERLLNRFRREVMRAGVIQECKRRRFFENTQDVRKRKTREAAKRNRRRRPQARFTPQNKQDVPATKQEADDDNWDLPEEADIPY
XP_004145671.1 30S ribosomal protein S21, chloroplastic [Cucumis sativus]7.6e-8995.6Show/hide
Query:  MASLSSFFSFLLPSKPPPPKPHQPLIASSPSPPNHAAAQFQTLKSRDGSVALKPQQGPNHSEPLSAELASVICPSLAFANTMFFRSAYNVQVIVDDNEPE
        MASLSSFFSFLLPSKPPPPKPHQP IASSPSP NHAA QFQTLKSRDGSVAL PQQGPNHSEPLSAELASVICPSLA+ANTMFFRSAYNVQV+VDDNEPE
Subjt:  MASLSSFFSFLLPSKPPPPKPHQPLIASSPSPPNHAAAQFQTLKSRDGSVALKPQQGPNHSEPLSAELASVICPSLAFANTMFFRSAYNVQVIVDDNEPE

Query:  ERLLNRFRREVMRAGVIQECKRRRFFENTQDVRKRKTREAAKRNRRRRPQARFTPQNKQDVPATKQEADDDNWDLPEEADIP
        ERLLNRFRREVMRAGVIQECKRRRFFENTQDVRKRKTREAAKRNRRRRPQARFTPQNKQDVPATKQEADDDNWDLPE+ DIP
Subjt:  ERLLNRFRREVMRAGVIQECKRRRFFENTQDVRKRKTREAAKRNRRRRPQARFTPQNKQDVPATKQEADDDNWDLPEEADIP
XP_008450090.2 PREDICTED: uncharacterized protein LOC103491780, partial [Cucumis melo]1.0e-93100Show/hide
Query:  MASLSSFFSFLLPSKPPPPKPHQPLIASSPSPPNHAAAQFQTLKSRDGSVALKPQQGPNHSEPLSAELASVICPSLAFANTMFFRSAYNVQVIVDDNEPE
        MASLSSFFSFLLPSKPPPPKPHQPLIASSPSPPNHAAAQFQTLKSRDGSVALKPQQGPNHSEPLSAELASVICPSLAFANTMFFRSAYNVQVIVDDNEPE
Subjt:  MASLSSFFSFLLPSKPPPPKPHQPLIASSPSPPNHAAAQFQTLKSRDGSVALKPQQGPNHSEPLSAELASVICPSLAFANTMFFRSAYNVQVIVDDNEPE

Query:  ERLLNRFRREVMRAGVIQECKRRRFFENTQDVRKRKTREAAKRNRRRRPQARFTPQNKQDVPATKQEADDDNWDLPEEADIPY
        ERLLNRFRREVMRAGVIQECKRRRFFENTQDVRKRKTREAAKRNRRRRPQARFTPQNKQDVPATKQEADDDNWDLPEEADIPY
Subjt:  ERLLNRFRREVMRAGVIQECKRRRFFENTQDVRKRKTREAAKRNRRRRPQARFTPQNKQDVPATKQEADDDNWDLPEEADIPY
XP_038900112.1 30S ribosomal protein S21, chloroplastic [Benincasa hispida]8.4e-8894.59Show/hide
Query:  MASLSSFFSFLLPSKPPPPKPHQPLIASSPSPPNH--AAAQFQTLKSRDGSVALKPQQGPNHSEPLSAELASVICPSLAFANTMFFRSAYNVQVIVDDNE
        MASLSSFFSFLLPSKPPPPKPHQPLI SSPSP NH  AAAQ QTLKS+DGSV+LKPQQGPNHSEPLSAELASVICPSLAFANTMFFRSAYNVQV+VDDNE
Subjt:  MASLSSFFSFLLPSKPPPPKPHQPLIASSPSPPNH--AAAQFQTLKSRDGSVALKPQQGPNHSEPLSAELASVICPSLAFANTMFFRSAYNVQVIVDDNE

Query:  PEERLLNRFRREVMRAGVIQECKRRRFFENTQDVRKRKTREAAKRNRRRRPQARFTPQNKQDVPATKQEADDDNWDLPEEADIPY
        PEERLLNRFRREVMRAGVIQECKRRRFFENTQDVRKRKTREAAKRNRRRRPQARFTPQNKQDVPATKQEADDDNWDLPEE +IPY
Subjt:  PEERLLNRFRREVMRAGVIQECKRRRFFENTQDVRKRKTREAAKRNRRRRPQARFTPQNKQDVPATKQEADDDNWDLPEEADIPY
TrEMBL top hitse value%identityAlignment
A0A0A0LDL7 Uncharacterized protein3.7e-8995.6Show/hide
Query:  MASLSSFFSFLLPSKPPPPKPHQPLIASSPSPPNHAAAQFQTLKSRDGSVALKPQQGPNHSEPLSAELASVICPSLAFANTMFFRSAYNVQVIVDDNEPE
        MASLSSFFSFLLPSKPPPPKPHQP IASSPSP NHAA QFQTLKSRDGSVAL PQQGPNHSEPLSAELASVICPSLA+ANTMFFRSAYNVQV+VDDNEPE
Subjt:  MASLSSFFSFLLPSKPPPPKPHQPLIASSPSPPNHAAAQFQTLKSRDGSVALKPQQGPNHSEPLSAELASVICPSLAFANTMFFRSAYNVQVIVDDNEPE

Query:  ERLLNRFRREVMRAGVIQECKRRRFFENTQDVRKRKTREAAKRNRRRRPQARFTPQNKQDVPATKQEADDDNWDLPEEADIP
        ERLLNRFRREVMRAGVIQECKRRRFFENTQDVRKRKTREAAKRNRRRRPQARFTPQNKQDVPATKQEADDDNWDLPE+ DIP
Subjt:  ERLLNRFRREVMRAGVIQECKRRRFFENTQDVRKRKTREAAKRNRRRRPQARFTPQNKQDVPATKQEADDDNWDLPEEADIP
A0A1S3BNG4 uncharacterized protein LOC1034917805.0e-94100Show/hide
Query:  MASLSSFFSFLLPSKPPPPKPHQPLIASSPSPPNHAAAQFQTLKSRDGSVALKPQQGPNHSEPLSAELASVICPSLAFANTMFFRSAYNVQVIVDDNEPE
        MASLSSFFSFLLPSKPPPPKPHQPLIASSPSPPNHAAAQFQTLKSRDGSVALKPQQGPNHSEPLSAELASVICPSLAFANTMFFRSAYNVQVIVDDNEPE
Subjt:  MASLSSFFSFLLPSKPPPPKPHQPLIASSPSPPNHAAAQFQTLKSRDGSVALKPQQGPNHSEPLSAELASVICPSLAFANTMFFRSAYNVQVIVDDNEPE

Query:  ERLLNRFRREVMRAGVIQECKRRRFFENTQDVRKRKTREAAKRNRRRRPQARFTPQNKQDVPATKQEADDDNWDLPEEADIPY
        ERLLNRFRREVMRAGVIQECKRRRFFENTQDVRKRKTREAAKRNRRRRPQARFTPQNKQDVPATKQEADDDNWDLPEEADIPY
Subjt:  ERLLNRFRREVMRAGVIQECKRRRFFENTQDVRKRKTREAAKRNRRRRPQARFTPQNKQDVPATKQEADDDNWDLPEEADIPY
A0A5D3C287 Uncharacterized protein1.9e-9399.45Show/hide
Query:  MASLSSFFSFLLPSKPPPPKPHQPLIASSPSPPNHAAAQFQTLKSRDGSVALKPQQGPNHSEPLSAELASVICPSLAFANTMFFRSAYNVQVIVDDNEPE
        MASLSSFFSFLLPSKPPPPKPHQPLIASSPSPPNHAAAQFQTLKSRDGSVALKPQQGPNHSEPLSAELASVICPSLAFANTMFFRSAYNVQVIVDDNEPE
Subjt:  MASLSSFFSFLLPSKPPPPKPHQPLIASSPSPPNHAAAQFQTLKSRDGSVALKPQQGPNHSEPLSAELASVICPSLAFANTMFFRSAYNVQVIVDDNEPE

Query:  ERLLNRFRREVMRAGVIQECKRRRFFENTQDVRKRKTREAAKRNRRRRPQARFTPQNKQDVPATKQEADDDNWDLPEEADIPY
        ERLLNRFRREVMRAGVIQECKRRRFFENTQDVRKRKTREAAKRNRRRRPQARFTPQNKQDVPATKQEADDDNWDLPEE DIPY
Subjt:  ERLLNRFRREVMRAGVIQECKRRRFFENTQDVRKRKTREAAKRNRRRRPQARFTPQNKQDVPATKQEADDDNWDLPEEADIPY
A0A6J1J5C2 30S ribosomal protein S21, chloroplastic-like6.3e-8190.71Show/hide
Query:  MASLSSFFSFLLPSKPPPPKPHQPLIASSPSPPNHAAAQFQTLKSRDGSVALKPQQGPNHSEPLSAELASVICPSLAFANTMFFRSAYNVQVIVDDNEPE
        MASLSSFFSFLLPSKPPPPKP QPLIA SPSP N AAAQFQTLKSRDGSVAL PQQ P HSEPLSAELASVICPSLAFANTMFFRSAYNVQVIVDDNEPE
Subjt:  MASLSSFFSFLLPSKPPPPKPHQPLIASSPSPPNHAAAQFQTLKSRDGSVALKPQQGPNHSEPLSAELASVICPSLAFANTMFFRSAYNVQVIVDDNEPE

Query:  ERLLNRFRREVMRAGVIQECKRRRFFENTQDVRKRKTREAAKRNRRRRPQARFTPQNKQDVPATKQEADDDNWDLPEEADIPY
        ERLLNRFRREVMRAGVIQECKRR+FFEN  D++KRK+REAAKRNRRRRPQ RFTPQ+KQDVPATKQEADDDNWDLPEE  IPY
Subjt:  ERLLNRFRREVMRAGVIQECKRRRFFENTQDVRKRKTREAAKRNRRRRPQARFTPQNKQDVPATKQEADDDNWDLPEEADIPY
Q8VWX5 Ribosome-like protein (Fragment)3.7e-8995.6Show/hide
Query:  MASLSSFFSFLLPSKPPPPKPHQPLIASSPSPPNHAAAQFQTLKSRDGSVALKPQQGPNHSEPLSAELASVICPSLAFANTMFFRSAYNVQVIVDDNEPE
        MASLSSFFSFLLPSKPPPPKPHQP IASSPSP NHAA QFQTLKSRDGSVAL PQQGPNHSEPLSAELASVICPSLA+ANTMFFRSAYNVQV+VDDNEPE
Subjt:  MASLSSFFSFLLPSKPPPPKPHQPLIASSPSPPNHAAAQFQTLKSRDGSVALKPQQGPNHSEPLSAELASVICPSLAFANTMFFRSAYNVQVIVDDNEPE

Query:  ERLLNRFRREVMRAGVIQECKRRRFFENTQDVRKRKTREAAKRNRRRRPQARFTPQNKQDVPATKQEADDDNWDLPEEADIP
        ERLLNRFRREVMRAGVIQECKRRRFFENTQDVRKRKTREAAKRNRRRRPQARFTPQNKQDVPATKQEADDDNWDLPE+ DIP
Subjt:  ERLLNRFRREVMRAGVIQECKRRRFFENTQDVRKRKTREAAKRNRRRRPQARFTPQNKQDVPATKQEADDDNWDLPEEADIP
SwissProt top hitse value%identityAlignment
B8GPU0 30S ribosomal protein S214.6e-0446.43Show/hide
Query:  VIVDDNEPEERLLNRFRREVMRAGVIQECKRRRFFENTQDVRKRKTREAAKRNRRR
        V V +NEP E  L RF+R   +AGV+ E +RR F+E   ++RKRK   A KR  +R
Subjt:  VIVDDNEPEERLLNRFRREVMRAGVIQECKRRRFFENTQDVRKRKTREAAKRNRRR
P48949 30S ribosomal protein S212.7e-0446.55Show/hide
Query:  QVIVDDNEPEERLLNRFRREVMRAGVIQECKRRRFFENTQDVRKRKTREAAKRNRRRR
        QV+V  NEP E  L RF+R+V +AG+  + K+ +FFE  Q+  KRK  EA +R +R R
Subjt:  QVIVDDNEPEERLLNRFRREVMRAGVIQECKRRRFFENTQDVRKRKTREAAKRNRRRR
P82024 30S ribosomal protein S21, chloroplastic5.0e-3551.87Show/hide
Query:  MASLSSFFSFLLPSKPP----PPKPHQPLIASSPSPPNHAAAQFQTLKSRDGSVALKPQQGPN----HSEPLSAELASVICPSLAFANTMFFRSAYNVQV
        MAS SS  +FL P  P     PP       +S+P  PN       +L S+  S+++  ++  N      E    +L +V+CPSLAF+NT++FRSAYNVQV
Subjt:  MASLSSFFSFLLPSKPP----PPKPHQPLIASSPSPPNHAAAQFQTLKSRDGSVALKPQQGPN----HSEPLSAELASVICPSLAFANTMFFRSAYNVQV

Query:  IVDDNEPEERLLNRFRREVMRAGVIQECKRRRFFENTQDVRKRKTREAAKRNRRRR--PQARFTPQNKQDVPATKQEADDDNWDLPE
        +VDDNE EERLLNRFRREVMRAGVIQECKRRR+FEN Q+ +KRK REAAKRN RRR  P     P  ++     K+E D DNWD+PE
Subjt:  IVDDNEPEERLLNRFRREVMRAGVIQECKRRRFFENTQDVRKRKTREAAKRNRRRR--PQARFTPQNKQDVPATKQEADDDNWDLPE
Arabidopsis top hitse value%identityAlignment
AT3G27160.1 Ribosomal protein S21 family protein2.0e-3951.63Show/hide
Query:  SLSSFFSFLLPSKPPPPKPHQPLIASSPSPPNHAAAQFQTLKSRDGSVALKPQQGPNHSEPLSAELASVICPSLAFANTMFFRSAYNVQVIVDDNEPEER
        SL+SF SF+ P K    KP  P   + PSP        Q  ++     ++  ++  + +  LS+ELASVICPSLA++NT+FF S YNVQV V+DNE EER
Subjt:  SLSSFFSFLLPSKPPPPKPHQPLIASSPSPPNHAAAQFQTLKSRDGSVALKPQQGPNHSEPLSAELASVICPSLAFANTMFFRSAYNVQVIVDDNEPEER

Query:  LLNRFRREVMRAGVIQECKRRRFFENTQDVRKRKTREAAKRNRRRRPQARFTPQNKQDVPAT----KQEADDDNWDLPEEADIP
        L+NRFRREVMR GVIQECKRRR+FEN QD +KR+TR+AAKRN++RRPQARFT + +++  A     K++ ++DNW++P   D+P
Subjt:  LLNRFRREVMRAGVIQECKRRRFFENTQDVRKRKTREAAKRNRRRRPQARFTPQNKQDVPAT----KQEADDDNWDLPEEADIP
AT5G63300.1 Ribosomal protein S21 family protein1.9e-2137.89Show/hide
Query:  MASLSSFFSFLLPSKPPPPKPHQPLIASSPSPPNHAAAQFQTLKSRDGSVALKPQQGPNHSEPLSAELASVICPSLAFANTMFFRSA-YNVQVIVDDNEP
        + SLS   S LL SKPP P   +P+  + PS  +   +Q  ++ ++  +          H + ++     V  PSLA AN +FF+S+ YNV+V+  D E 
Subjt:  MASLSSFFSFLLPSKPPPPKPHQPLIASSPSPPNHAAAQFQTLKSRDGSVALKPQQGPNHSEPLSAELASVICPSLAFANTMFFRSA-YNVQVIVDDNEP

Query:  EERLLNRFRREVMRAGVIQECKRRRFFENTQDVRKRKTREAAKRNRRRRPQARFTPQNKQDV-----PATKQEADDDNWDL-PEEADIPY
        EE+L+N F+R   RAGV+QE +RRRFFE++ + + RKT+EAAK+ R+RRP  +  P +  ++      A++++  DD+W+L PE+ +IPY
Subjt:  EERLLNRFRREVMRAGVIQECKRRRFFENTQDVRKRKTREAAKRNRRRRPQARFTPQNKQDV-----PATKQEADDDNWDL-PEEADIPY
AT5G63300.2 Ribosomal protein S21 family protein5.4e-1639.86Show/hide
Query:  MASLSSFFSFLLPSKPPPPKPHQPLIASSPSPPNHAAAQFQTLKSRDGSVALKPQQGPNHSEPLSAELASVICPSLAFANTMFFRSA-YNVQVIVDDNEP
        + SLS   S LL SKPP P   +P+  + PS  +   +Q  ++ ++  +          H + ++     V  PSLA AN +FF+S+ YNV+V+  D E 
Subjt:  MASLSSFFSFLLPSKPPPPKPHQPLIASSPSPPNHAAAQFQTLKSRDGSVALKPQQGPNHSEPLSAELASVICPSLAFANTMFFRSA-YNVQVIVDDNEP

Query:  EERLLNRFRREVMRAGVIQECKRRRFFENTQDVRKRKTREAAKRNRRR
        EE+L+N F+R   RAGV+QE +RRRFFE++ + + RKT+EAAK+ R+R
Subjt:  EERLLNRFRREVMRAGVIQECKRRRFFENTQDVRKRKTREAAKRNRRR

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTTCTCTCTCCAGCTTCTTCTCCTTCCTCTTACCCTCTAAACCACCGCCCCCAAAACCCCACCAGCCCCTCATTGCCTCCTCCCCTTCTCCGCCGAATCACGCCGC
CGCTCAGTTTCAAACACTGAAATCCAGGGATGGATCGGTTGCCCTAAAGCCCCAACAGGGTCCCAACCATTCGGAGCCCTTATCCGCGGAATTGGCCTCCGTTATCTGTC
CCTCCCTCGCCTTCGCCAACACAATGTTCTTCAGATCCGCTTATAATGTTCAGGTGATTGTGGATGATAATGAACCCGAGGAGCGCCTTCTCAACAGATTCCGGCGAGAG
GTTATGAGGGCTGGCGTGATTCAGGAGTGTAAGAGACGGAGATTCTTTGAAAACACTCAAGATGTTAGGAAGCGCAAGACTCGCGAGGCTGCTAAACGCAACCGCCGCAG
GCGGCCACAGGCAAGATTTACACCACAGAACAAGCAGGATGTGCCTGCAACCAAGCAAGAAGCTGATGATGACAACTGGGATTTACCTGAAGAAGCGGACATTCCTTATT
AA
mRNA sequenceShow/hide mRNA sequence
AGAGATAGAGTGATGATCTCATCAAGAGAGGGATTCAATTTACAAACTTGAGAGGGAGAAAAGATTGTCGGTTTTCGCTTTTCGGAAGAAGAAAAGGGAAAGTTTCATCA
AAAGTCCAAAACAAGCAACAGATAAGACTGAATTCCAAGCACAGCCATCCATGGCTTCTCTCTCCAGCTTCTTCTCCTTCCTCTTACCCTCTAAACCACCGCCCCCAAAA
CCCCACCAGCCCCTCATTGCCTCCTCCCCTTCTCCGCCGAATCACGCCGCCGCTCAGTTTCAAACACTGAAATCCAGGGATGGATCGGTTGCCCTAAAGCCCCAACAGGG
TCCCAACCATTCGGAGCCCTTATCCGCGGAATTGGCCTCCGTTATCTGTCCCTCCCTCGCCTTCGCCAACACAATGTTCTTCAGATCCGCTTATAATGTTCAGGTGATTG
TGGATGATAATGAACCCGAGGAGCGCCTTCTCAACAGATTCCGGCGAGAGGTTATGAGGGCTGGCGTGATTCAGGAGTGTAAGAGACGGAGATTCTTTGAAAACACTCAA
GATGTTAGGAAGCGCAAGACTCGCGAGGCTGCTAAACGCAACCGCCGCAGGCGGCCACAGGCAAGATTTACACCACAGAACAAGCAGGATGTGCCTGCAACCAAGCAAGA
AGCTGATGATGACAACTGGGATTTACCTGAAGAAGCGGACATTCCTTATTAACTTGATCCGGAAGTTCGCCCTCACCAAATGTTTAATGTTTTCTGATTATCTTTTGATT
TTGGGGAGCTGTTAATTCTCTGTAATGTAAGTTATTTTCCATGTAATATCTTCTTTAGTTGAGAAGTTTTTGCAATATTTCTTTTGAATAAATAGAAATGATCATTCCTT
TTACATATAATACTGGCAAACACGTTATAAAGATAA
Protein sequenceShow/hide protein sequence
MASLSSFFSFLLPSKPPPPKPHQPLIASSPSPPNHAAAQFQTLKSRDGSVALKPQQGPNHSEPLSAELASVICPSLAFANTMFFRSAYNVQVIVDDNEPEERLLNRFRRE
VMRAGVIQECKRRRFFENTQDVRKRKTREAAKRNRRRRPQARFTPQNKQDVPATKQEADDDNWDLPEEADIPY