CuGenDBv2

Gene ID	MELO3C015985
Organism	Cucumis melo DHL92 (Melon (DHL92) v4)
Description	large ribosomal RNA subunit accumulation protein YCED homolog 1, chloroplastic
Genome location	chr01:31280937..31285783
RNA-Seq Expression	MELO3C015985
Synteny	MELO3C015985
Gene Ontology terms	GO:0009507 - chloroplast (cellular component)
InterPro domains	IPR003772 - Large ribosomal RNA subunit accumulation protein YceD

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

KAA0067976.1 uncharacterized protein E6C27_scaffold138G001640 [Cucumis melo var. makuwa]

1.5e-199

93.83

Show/hide

Query:  MREEKSFHEFSHWIKFFRGASSKFPPFSRTSGWDSFRLTSLADYIKFAGTVLFVSTEIPLPTFCPHSFKMLATFPTSSVVSSSHSKEFINVFYFESKGNV
        MREEKSFHEFSHWIKFFRGASSKFPPFSRTSGWDSFRLTSLADYIKFAGTVLFVSTEIPLPTFCPHSFKMLATFPTSSVVSSSHSKEFINVFYF+SKGNV
Subjt:  MREEKSFHEFSHWIKFFRGASSKFPPFSRTSGWDSFRLTSLADYIKFAGTVLFVSTEIPLPTFCPHSFKMLATFPTSSVVSSSHSKEFINVFYFESKGNV

Query:  SFNSHFRVPWRFMRNIQPSLGDPCIKMKSTSIKCVKPTYQSLFEDNSIITDWGDQEGDIEEMSSPWEGAVIYKRNSSVSHVEYCTTLERLGLEKLSTDVS
        SFNSHFRVPWRFMRNIQPSLGDPCIKMKSTSIKCVKPTYQSLFEDNSIITDWGDQEGDIEEM SPWEGAVIYKRNSSVSHVEYCTTLERLGLEKLSTDVS
Subjt:  SFNSHFRVPWRFMRNIQPSLGDPCIKMKSTSIKCVKPTYQSLFEDNSIITDWGDQEGDIEEMSSPWEGAVIYKRNSSVSHVEYCTTLERLGLEKLSTDVS

Query:  KSRASTMGLRVTKDVKDYPFGTPVQISVDVTRKDKKLRLDGIVKTVITLNCYRCCEPAPECIFSNFSILLSEEPIEEPDVINMGIISGQDIFKTDNGNSD
        KSRASTMGLRVTKDVKDYPFGTPVQISVDVTRKDKKLRLDGIVKTVITLNCYRCCEPAPECIFSNFSILLSEEPIEEPDVINMGIISGQDIFKTDNGNSD
Subjt:  KSRASTMGLRVTKDVKDYPFGTPVQISVDVTRKDKKLRLDGIVKTVITLNCYRCCEPAPECIFSNFSILLSEEPIEEPDVINMGIISGQDIFKTDNGNSD

Query:  EDDEESVDLDDQLYFPPVDKEIDISKNIRDILHLEITMNVICNPGCKAITYGNFPTGNLGYQDITILAINKNE
        EDDEESVDLDDQLYFPPVDKEIDISKNIRDILHLEITMNVICNPGCK +        N G  + +  A+ KN+
Subjt:  EDDEESVDLDDQLYFPPVDKEIDISKNIRDILHLEITMNVICNPGCKAITYGNFPTGNLGYQDITILAINKNE

TYK18147.1 uncharacterized protein E5676_scaffold411G00780 [Cucumis melo var. makuwa]

2.6e-183

88.47

Show/hide

Query:  MREEKSFHEFSHWIKFFRGASSKFPPFSRTSGWDSFRLTSLADYIKFAGTVLFVSTEIPLPTFCPHSFKMLATFPTSSVVSSSHSKEFINVFYFESKGNV
        MREEKSFHEFSHWIKFFRGASSKFPPFSRTS                 GTVLFVSTEIPLPTFCPHSFKMLATFPTSSVVSSSHSKEFINVFYF+SKGNV
Subjt:  MREEKSFHEFSHWIKFFRGASSKFPPFSRTSGWDSFRLTSLADYIKFAGTVLFVSTEIPLPTFCPHSFKMLATFPTSSVVSSSHSKEFINVFYFESKGNV

Query:  SFNSHFRVPWRFMRNIQPSLGDPCIKMKSTSIKCVKPTYQSLFEDNSIITDWGDQEGDIEEMSSPWEGAVIYKRNSSVSHVEYCTTLERLGLEKLSTDVS
        SFNS  R PWRFMRNIQPSLGDPCIKMKSTSIKCVKPTYQSLFEDNSIITDWGDQEGDIEEM SPWEGAVIYKRNSSVSHVEYCTTLERLGLEKLSTDVS
Subjt:  SFNSHFRVPWRFMRNIQPSLGDPCIKMKSTSIKCVKPTYQSLFEDNSIITDWGDQEGDIEEMSSPWEGAVIYKRNSSVSHVEYCTTLERLGLEKLSTDVS

Query:  KSRASTMGLRVTKDVKDYPFGTPVQISVDVTRKDKKLRLDGIVKTVITLNCYRCCEPAPECIFSNFSILLSEEPIEEPDVINMGIISGQDIFKTDNGNSD
        KSRASTMGLRVTKDVKDYPFGTPVQISVDVTRKDKKLRLDGIVKTVITLNCYRCCEPAPECIFSNFSILLSEEPIEEPDVINMGIISGQDIFKTDNGNSD
Subjt:  KSRASTMGLRVTKDVKDYPFGTPVQISVDVTRKDKKLRLDGIVKTVITLNCYRCCEPAPECIFSNFSILLSEEPIEEPDVINMGIISGQDIFKTDNGNSD

Query:  EDDEESVDLDDQLYFPPVDKEIDISKNIRDILHLEITMNVICNPGCKAITYGNFPTGNLGYQDITILAINKNE
        EDDEESVDLDDQLYFPPVDKEIDISKNIRDILHLEITMNVICNPGCK +        N G  + +  A+ KN+
Subjt:  EDDEESVDLDDQLYFPPVDKEIDISKNIRDILHLEITMNVICNPGCKAITYGNFPTGNLGYQDITILAINKNE

XP_004136166.1 large ribosomal RNA subunit accumulation protein YCED homolog 1, chloroplastic [Cucumis sativus]

6.0e-148

86.84

Show/hide

Query:  MLATFPTSSVVSSSHSKEFINVFYFESKGNVSFNSHFRVPWRFMRNIQPSLGDPCIKMKSTSIKCVKPTYQSLFEDNSIITDWGDQEGDIEEMSSPWEGA
        MLATFPTSSVVSSSHS EFINVFYF+SKG VSF+SHFRVPWR +RNIQPSLGDPCIKMKST+IKCVKPTYQSLFEDNSIITDW DQEGDIEEM SPWEGA
Subjt:  MLATFPTSSVVSSSHSKEFINVFYFESKGNVSFNSHFRVPWRFMRNIQPSLGDPCIKMKSTSIKCVKPTYQSLFEDNSIITDWGDQEGDIEEMSSPWEGA

Query:  VIYKRNSSVSHVEYCTTLERLGLEKLSTDVSKSRASTMGLRVTKDVKDYPFGTPVQISVDVTRKDKKLRLDGIVKTVITLNCYRCCEPAPECIFSNFSIL
        +IYKRNSSVSHVEYCTTLERLGLEKLSTDVSKSRASTMGLRVTKDVKDYPFGTPVQISVDVTRK+KKLRLDGIVKTVITLNCY CCEPAPECIFSNFSI+
Subjt:  VIYKRNSSVSHVEYCTTLERLGLEKLSTDVSKSRASTMGLRVTKDVKDYPFGTPVQISVDVTRKDKKLRLDGIVKTVITLNCYRCCEPAPECIFSNFSIL

Query:  LSEEPIEEPDVINMGIISGQDIFKTDNGNSDEDDEESVDLDDQLYFPPVDKEIDISKNIRDILHLEITMNVICNPGCKAITYGNFPTGNLGYQDITILAI
        LSEEPIEEPDVINMGIISG+D+FKTDNGNSDEDDEE +DLDDQLYFPP++KEIDISKNIRDILHLEITMNVIC+PGCK I        N G    +  A+
Subjt:  LSEEPIEEPDVINMGIISGQDIFKTDNGNSDEDDEESVDLDDQLYFPPVDKEIDISKNIRDILHLEITMNVICNPGCKAITYGNFPTGNLGYQDITILAI

Query:  NKNE
         KN+
Subjt:  NKNE

XP_008451550.1 PREDICTED: uncharacterized protein LOC103492797 isoform X1 [Cucumis melo]

1.8e-200

94.37

Show/hide

Query:  MREEKSFHEFSHWIKFFRGASSKFPPFSRTSGWDSFRLTSLADYIKFAGTVLFVSTEIPLPTFCPHSFKMLATFPTSSVVSSSHSKEFINVFYFESKGNV
        MREEKSFHEFSHWIKFFRGASSKFPPFSRTSGWDSFRLTSLADYIKFAGTVLFVSTEIPLPTFCPHSFKMLATFPTSSVVSSSHSKEFINVFYFESKGNV
Subjt:  MREEKSFHEFSHWIKFFRGASSKFPPFSRTSGWDSFRLTSLADYIKFAGTVLFVSTEIPLPTFCPHSFKMLATFPTSSVVSSSHSKEFINVFYFESKGNV

Query:  SFNSHFRVPWRFMRNIQPSLGDPCIKMKSTSIKCVKPTYQSLFEDNSIITDWGDQEGDIEEMSSPWEGAVIYKRNSSVSHVEYCTTLERLGLEKLSTDVS
        SFNSHFRVPWRFMRNIQPSLGDPCIKMKSTSIKCVKPTYQSLFEDNSIITDWGDQEGDIEEMSSPWEGAVIYKRNSSVSHVEYCTTLERLGLEKLSTDVS
Subjt:  SFNSHFRVPWRFMRNIQPSLGDPCIKMKSTSIKCVKPTYQSLFEDNSIITDWGDQEGDIEEMSSPWEGAVIYKRNSSVSHVEYCTTLERLGLEKLSTDVS

Query:  KSRASTMGLRVTKDVKDYPFGTPVQISVDVTRKDKKLRLDGIVKTVITLNCYRCCEPAPECIFSNFSILLSEEPIEEPDVINMGIISGQDIFKTDNGNSD
        KSRASTMGLRVTKDVKDYPFGTPVQISVDVTRKDKKLRLDGIVKTVITLNCYRCCEPAPECIFSNFSILLSEEPIEEPDVINMGIISGQDIFKTDNGNSD
Subjt:  KSRASTMGLRVTKDVKDYPFGTPVQISVDVTRKDKKLRLDGIVKTVITLNCYRCCEPAPECIFSNFSILLSEEPIEEPDVINMGIISGQDIFKTDNGNSD

Query:  EDDEESVDLDDQLYFPPVDKEIDISKNIRDILHLEITMNVICNPGCKAITYGNFPTGNLGYQDITILAINKNE
        EDDEESVDLDDQLYFPPVDKEIDISKNIRDILHLEITMNVICNPGCK +        N G  + +  A+ KN+
Subjt:  EDDEESVDLDDQLYFPPVDKEIDISKNIRDILHLEITMNVICNPGCKAITYGNFPTGNLGYQDITILAINKNE

XP_008451552.1 PREDICTED: uncharacterized protein LOC103492797 isoform X2 [Cucumis melo]

1.1e-186

89.81

Show/hide

Query:  MREEKSFHEFSHWIKFFRGASSKFPPFSRTSGWDSFRLTSLADYIKFAGTVLFVSTEIPLPTFCPHSFKMLATFPTSSVVSSSHSKEFINVFYFESKGNV
        MREEKSFHEFSHWIKFFRGASSKFPPFSRTS                 GTVLFVSTEIPLPTFCPHSFKMLATFPTSSVVSSSHSKEFINVFYFESKGNV
Subjt:  MREEKSFHEFSHWIKFFRGASSKFPPFSRTSGWDSFRLTSLADYIKFAGTVLFVSTEIPLPTFCPHSFKMLATFPTSSVVSSSHSKEFINVFYFESKGNV

Query:  SFNSHFRVPWRFMRNIQPSLGDPCIKMKSTSIKCVKPTYQSLFEDNSIITDWGDQEGDIEEMSSPWEGAVIYKRNSSVSHVEYCTTLERLGLEKLSTDVS
        SFNSHFRVPWRFMRNIQPSLGDPCIKMKSTSIKCVKPTYQSLFEDNSIITDWGDQEGDIEEMSSPWEGAVIYKRNSSVSHVEYCTTLERLGLEKLSTDVS
Subjt:  SFNSHFRVPWRFMRNIQPSLGDPCIKMKSTSIKCVKPTYQSLFEDNSIITDWGDQEGDIEEMSSPWEGAVIYKRNSSVSHVEYCTTLERLGLEKLSTDVS

Query:  KSRASTMGLRVTKDVKDYPFGTPVQISVDVTRKDKKLRLDGIVKTVITLNCYRCCEPAPECIFSNFSILLSEEPIEEPDVINMGIISGQDIFKTDNGNSD
        KSRASTMGLRVTKDVKDYPFGTPVQISVDVTRKDKKLRLDGIVKTVITLNCYRCCEPAPECIFSNFSILLSEEPIEEPDVINMGIISGQDIFKTDNGNSD
Subjt:  KSRASTMGLRVTKDVKDYPFGTPVQISVDVTRKDKKLRLDGIVKTVITLNCYRCCEPAPECIFSNFSILLSEEPIEEPDVINMGIISGQDIFKTDNGNSD

Query:  EDDEESVDLDDQLYFPPVDKEIDISKNIRDILHLEITMNVICNPGCKAITYGNFPTGNLGYQDITILAINKNE
        EDDEESVDLDDQLYFPPVDKEIDISKNIRDILHLEITMNVICNPGCK +        N G  + +  A+ KN+
Subjt:  EDDEESVDLDDQLYFPPVDKEIDISKNIRDILHLEITMNVICNPGCKAITYGNFPTGNLGYQDITILAINKNE

TrEMBL top hits

e value

%identity

Alignment

A0A0A0KAY7 Uncharacterized protein

2.9e-148

86.84

Show/hide

Query:  MLATFPTSSVVSSSHSKEFINVFYFESKGNVSFNSHFRVPWRFMRNIQPSLGDPCIKMKSTSIKCVKPTYQSLFEDNSIITDWGDQEGDIEEMSSPWEGA
        MLATFPTSSVVSSSHS EFINVFYF+SKG VSF+SHFRVPWR +RNIQPSLGDPCIKMKST+IKCVKPTYQSLFEDNSIITDW DQEGDIEEM SPWEGA
Subjt:  MLATFPTSSVVSSSHSKEFINVFYFESKGNVSFNSHFRVPWRFMRNIQPSLGDPCIKMKSTSIKCVKPTYQSLFEDNSIITDWGDQEGDIEEMSSPWEGA

Query:  VIYKRNSSVSHVEYCTTLERLGLEKLSTDVSKSRASTMGLRVTKDVKDYPFGTPVQISVDVTRKDKKLRLDGIVKTVITLNCYRCCEPAPECIFSNFSIL
        +IYKRNSSVSHVEYCTTLERLGLEKLSTDVSKSRASTMGLRVTKDVKDYPFGTPVQISVDVTRK+KKLRLDGIVKTVITLNCY CCEPAPECIFSNFSI+
Subjt:  VIYKRNSSVSHVEYCTTLERLGLEKLSTDVSKSRASTMGLRVTKDVKDYPFGTPVQISVDVTRKDKKLRLDGIVKTVITLNCYRCCEPAPECIFSNFSIL

Query:  LSEEPIEEPDVINMGIISGQDIFKTDNGNSDEDDEESVDLDDQLYFPPVDKEIDISKNIRDILHLEITMNVICNPGCKAITYGNFPTGNLGYQDITILAI
        LSEEPIEEPDVINMGIISG+D+FKTDNGNSDEDDEE +DLDDQLYFPP++KEIDISKNIRDILHLEITMNVIC+PGCK I        N G    +  A+
Subjt:  LSEEPIEEPDVINMGIISGQDIFKTDNGNSDEDDEESVDLDDQLYFPPVDKEIDISKNIRDILHLEITMNVICNPGCKAITYGNFPTGNLGYQDITILAI

Query:  NKNE
         KN+
Subjt:  NKNE

A0A1S3BR50 uncharacterized protein LOC103492797 isoform X2

5.4e-187

89.81

Show/hide

Query:  MREEKSFHEFSHWIKFFRGASSKFPPFSRTSGWDSFRLTSLADYIKFAGTVLFVSTEIPLPTFCPHSFKMLATFPTSSVVSSSHSKEFINVFYFESKGNV
        MREEKSFHEFSHWIKFFRGASSKFPPFSRTS                 GTVLFVSTEIPLPTFCPHSFKMLATFPTSSVVSSSHSKEFINVFYFESKGNV
Subjt:  MREEKSFHEFSHWIKFFRGASSKFPPFSRTSGWDSFRLTSLADYIKFAGTVLFVSTEIPLPTFCPHSFKMLATFPTSSVVSSSHSKEFINVFYFESKGNV

Query:  SFNSHFRVPWRFMRNIQPSLGDPCIKMKSTSIKCVKPTYQSLFEDNSIITDWGDQEGDIEEMSSPWEGAVIYKRNSSVSHVEYCTTLERLGLEKLSTDVS
        SFNSHFRVPWRFMRNIQPSLGDPCIKMKSTSIKCVKPTYQSLFEDNSIITDWGDQEGDIEEMSSPWEGAVIYKRNSSVSHVEYCTTLERLGLEKLSTDVS
Subjt:  SFNSHFRVPWRFMRNIQPSLGDPCIKMKSTSIKCVKPTYQSLFEDNSIITDWGDQEGDIEEMSSPWEGAVIYKRNSSVSHVEYCTTLERLGLEKLSTDVS

Query:  KSRASTMGLRVTKDVKDYPFGTPVQISVDVTRKDKKLRLDGIVKTVITLNCYRCCEPAPECIFSNFSILLSEEPIEEPDVINMGIISGQDIFKTDNGNSD
        KSRASTMGLRVTKDVKDYPFGTPVQISVDVTRKDKKLRLDGIVKTVITLNCYRCCEPAPECIFSNFSILLSEEPIEEPDVINMGIISGQDIFKTDNGNSD
Subjt:  KSRASTMGLRVTKDVKDYPFGTPVQISVDVTRKDKKLRLDGIVKTVITLNCYRCCEPAPECIFSNFSILLSEEPIEEPDVINMGIISGQDIFKTDNGNSD

Query:  EDDEESVDLDDQLYFPPVDKEIDISKNIRDILHLEITMNVICNPGCKAITYGNFPTGNLGYQDITILAINKNE
        EDDEESVDLDDQLYFPPVDKEIDISKNIRDILHLEITMNVICNPGCK +        N G  + +  A+ KN+
Subjt:  EDDEESVDLDDQLYFPPVDKEIDISKNIRDILHLEITMNVICNPGCKAITYGNFPTGNLGYQDITILAINKNE

A0A1S3BSU8 uncharacterized protein LOC103492797 isoform X1

8.7e-201

94.37

Show/hide

Query:  MREEKSFHEFSHWIKFFRGASSKFPPFSRTSGWDSFRLTSLADYIKFAGTVLFVSTEIPLPTFCPHSFKMLATFPTSSVVSSSHSKEFINVFYFESKGNV
        MREEKSFHEFSHWIKFFRGASSKFPPFSRTSGWDSFRLTSLADYIKFAGTVLFVSTEIPLPTFCPHSFKMLATFPTSSVVSSSHSKEFINVFYFESKGNV
Subjt:  MREEKSFHEFSHWIKFFRGASSKFPPFSRTSGWDSFRLTSLADYIKFAGTVLFVSTEIPLPTFCPHSFKMLATFPTSSVVSSSHSKEFINVFYFESKGNV

Query:  SFNSHFRVPWRFMRNIQPSLGDPCIKMKSTSIKCVKPTYQSLFEDNSIITDWGDQEGDIEEMSSPWEGAVIYKRNSSVSHVEYCTTLERLGLEKLSTDVS
        SFNSHFRVPWRFMRNIQPSLGDPCIKMKSTSIKCVKPTYQSLFEDNSIITDWGDQEGDIEEMSSPWEGAVIYKRNSSVSHVEYCTTLERLGLEKLSTDVS
Subjt:  SFNSHFRVPWRFMRNIQPSLGDPCIKMKSTSIKCVKPTYQSLFEDNSIITDWGDQEGDIEEMSSPWEGAVIYKRNSSVSHVEYCTTLERLGLEKLSTDVS

Query:  KSRASTMGLRVTKDVKDYPFGTPVQISVDVTRKDKKLRLDGIVKTVITLNCYRCCEPAPECIFSNFSILLSEEPIEEPDVINMGIISGQDIFKTDNGNSD
        KSRASTMGLRVTKDVKDYPFGTPVQISVDVTRKDKKLRLDGIVKTVITLNCYRCCEPAPECIFSNFSILLSEEPIEEPDVINMGIISGQDIFKTDNGNSD
Subjt:  KSRASTMGLRVTKDVKDYPFGTPVQISVDVTRKDKKLRLDGIVKTVITLNCYRCCEPAPECIFSNFSILLSEEPIEEPDVINMGIISGQDIFKTDNGNSD

Query:  EDDEESVDLDDQLYFPPVDKEIDISKNIRDILHLEITMNVICNPGCKAITYGNFPTGNLGYQDITILAINKNE
        EDDEESVDLDDQLYFPPVDKEIDISKNIRDILHLEITMNVICNPGCK +        N G  + +  A+ KN+
Subjt:  EDDEESVDLDDQLYFPPVDKEIDISKNIRDILHLEITMNVICNPGCKAITYGNFPTGNLGYQDITILAINKNE

A0A5A7VN29 Uncharacterized protein

7.3e-200

93.83

Show/hide

Query:  MREEKSFHEFSHWIKFFRGASSKFPPFSRTSGWDSFRLTSLADYIKFAGTVLFVSTEIPLPTFCPHSFKMLATFPTSSVVSSSHSKEFINVFYFESKGNV
        MREEKSFHEFSHWIKFFRGASSKFPPFSRTSGWDSFRLTSLADYIKFAGTVLFVSTEIPLPTFCPHSFKMLATFPTSSVVSSSHSKEFINVFYF+SKGNV
Subjt:  MREEKSFHEFSHWIKFFRGASSKFPPFSRTSGWDSFRLTSLADYIKFAGTVLFVSTEIPLPTFCPHSFKMLATFPTSSVVSSSHSKEFINVFYFESKGNV

Query:  SFNSHFRVPWRFMRNIQPSLGDPCIKMKSTSIKCVKPTYQSLFEDNSIITDWGDQEGDIEEMSSPWEGAVIYKRNSSVSHVEYCTTLERLGLEKLSTDVS
        SFNSHFRVPWRFMRNIQPSLGDPCIKMKSTSIKCVKPTYQSLFEDNSIITDWGDQEGDIEEM SPWEGAVIYKRNSSVSHVEYCTTLERLGLEKLSTDVS
Subjt:  SFNSHFRVPWRFMRNIQPSLGDPCIKMKSTSIKCVKPTYQSLFEDNSIITDWGDQEGDIEEMSSPWEGAVIYKRNSSVSHVEYCTTLERLGLEKLSTDVS

Query:  KSRASTMGLRVTKDVKDYPFGTPVQISVDVTRKDKKLRLDGIVKTVITLNCYRCCEPAPECIFSNFSILLSEEPIEEPDVINMGIISGQDIFKTDNGNSD
        KSRASTMGLRVTKDVKDYPFGTPVQISVDVTRKDKKLRLDGIVKTVITLNCYRCCEPAPECIFSNFSILLSEEPIEEPDVINMGIISGQDIFKTDNGNSD
Subjt:  KSRASTMGLRVTKDVKDYPFGTPVQISVDVTRKDKKLRLDGIVKTVITLNCYRCCEPAPECIFSNFSILLSEEPIEEPDVINMGIISGQDIFKTDNGNSD

Query:  EDDEESVDLDDQLYFPPVDKEIDISKNIRDILHLEITMNVICNPGCKAITYGNFPTGNLGYQDITILAINKNE
        EDDEESVDLDDQLYFPPVDKEIDISKNIRDILHLEITMNVICNPGCK +        N G  + +  A+ KN+
Subjt:  EDDEESVDLDDQLYFPPVDKEIDISKNIRDILHLEITMNVICNPGCKAITYGNFPTGNLGYQDITILAINKNE

A0A5D3D2J4 Uncharacterized protein

1.3e-183

88.47

Show/hide

Query:  MREEKSFHEFSHWIKFFRGASSKFPPFSRTSGWDSFRLTSLADYIKFAGTVLFVSTEIPLPTFCPHSFKMLATFPTSSVVSSSHSKEFINVFYFESKGNV
        MREEKSFHEFSHWIKFFRGASSKFPPFSRTS                 GTVLFVSTEIPLPTFCPHSFKMLATFPTSSVVSSSHSKEFINVFYF+SKGNV
Subjt:  MREEKSFHEFSHWIKFFRGASSKFPPFSRTSGWDSFRLTSLADYIKFAGTVLFVSTEIPLPTFCPHSFKMLATFPTSSVVSSSHSKEFINVFYFESKGNV

Query:  SFNSHFRVPWRFMRNIQPSLGDPCIKMKSTSIKCVKPTYQSLFEDNSIITDWGDQEGDIEEMSSPWEGAVIYKRNSSVSHVEYCTTLERLGLEKLSTDVS
        SFNS  R PWRFMRNIQPSLGDPCIKMKSTSIKCVKPTYQSLFEDNSIITDWGDQEGDIEEM SPWEGAVIYKRNSSVSHVEYCTTLERLGLEKLSTDVS
Subjt:  SFNSHFRVPWRFMRNIQPSLGDPCIKMKSTSIKCVKPTYQSLFEDNSIITDWGDQEGDIEEMSSPWEGAVIYKRNSSVSHVEYCTTLERLGLEKLSTDVS

Query:  KSRASTMGLRVTKDVKDYPFGTPVQISVDVTRKDKKLRLDGIVKTVITLNCYRCCEPAPECIFSNFSILLSEEPIEEPDVINMGIISGQDIFKTDNGNSD
        KSRASTMGLRVTKDVKDYPFGTPVQISVDVTRKDKKLRLDGIVKTVITLNCYRCCEPAPECIFSNFSILLSEEPIEEPDVINMGIISGQDIFKTDNGNSD
Subjt:  KSRASTMGLRVTKDVKDYPFGTPVQISVDVTRKDKKLRLDGIVKTVITLNCYRCCEPAPECIFSNFSILLSEEPIEEPDVINMGIISGQDIFKTDNGNSD

Query:  EDDEESVDLDDQLYFPPVDKEIDISKNIRDILHLEITMNVICNPGCKAITYGNFPTGNLGYQDITILAINKNE
        EDDEESVDLDDQLYFPPVDKEIDISKNIRDILHLEITMNVICNPGCK +        N G  + +  A+ KN+
Subjt:  EDDEESVDLDDQLYFPPVDKEIDISKNIRDILHLEITMNVICNPGCKAITYGNFPTGNLGYQDITILAINKNE

SwissProt top hits

e value

%identity

Alignment

A0A1D6HQ92 Large ribosomal RNA subunit accumulation protein YCED homolog 1, chloroplastic

1.9e-48

53.09

Show/hide

Query:  MSSPWEGAVIYKRNSSVSHVEYCTTLERLGLEKLSTDVSKSRASTMGLR-VTKDVKDYPFGTPVQISVDVTRKDKKLRLDGIVKTVITLNCYRCCEPAPE
        + SPWEGAV+Y+R+++V H+EY +TLERLGL  LS+  S++RA+ +GL   T D       TPV +SVDVTR+  +LRLDGIV+TVITL C+RC EPAP+
Subjt:  MSSPWEGAVIYKRNSSVSHVEYCTTLERLGLEKLSTDVSKSRASTMGLR-VTKDVKDYPFGTPVQISVDVTRKDKKLRLDGIVKTVITLNCYRCCEPAPE

Query:  CIFSNFSILLSEEPI-EEPDVINMGIISGQDIFKTDNGNSD----EDDEESVDLDDQLYFPPVDKEIDISKNIRDILHLEITMNVICNPGCKAI
         IF+NFS+LL+E+P+ EEPD   +G I  +D    D G +      D ++ +D DD+L+FP  DKEIDISK+IRD++HLEIT++ +CNP CK +
Subjt:  CIFSNFSILLSEEPI-EEPDVINMGIISGQDIFKTDNGNSD----EDDEESVDLDDQLYFPPVDKEIDISKNIRDILHLEITMNVICNPGCKAI

Q9LT27 Large ribosomal RNA subunit accumulation protein YCED homolog 1, chloroplastic

3.6e-71

60.89

Show/hide

Query:  IKMKSTSIKCVKPTYQSLFEDNSIITDWGDQEGDIEEMSSPWEGAVIYKRNSSVSHVEYCTTLERLGLEKLSTDVSKSRASTMGLRVTKDVKDYPFGTPV
        IK+   +   +  + +S  E ++I  DW DQE +IE+  SPWEG+V+Y+RN+SV+HVEYCTTLERLGL +LSTDVSK RAS MGLRVTKDVKDYP GTPV
Subjt:  IKMKSTSIKCVKPTYQSLFEDNSIITDWGDQEGDIEEMSSPWEGAVIYKRNSSVSHVEYCTTLERLGLEKLSTDVSKSRASTMGLRVTKDVKDYPFGTPV

Query:  QISVDVTRKDKKLRLDGIVKTVITLNCYRCCEPAPECIFSNFSILLSEEPIEEPDVINMGIISGQDIFKTDNGNSDEDDEESVDLDDQLYFPPVDKEIDI
        Q+SVDV RK KKLRLDGIV+TVITL C RC E   E IFSNFS+LL+EEP+EEPDVI++G   G D  K +  + D++D+  +D +D+L+FPP  KEIDI
Subjt:  QISVDVTRKDKKLRLDGIVKTVITLNCYRCCEPAPECIFSNFSILLSEEPIEEPDVINMGIISGQDIFKTDNGNSDEDDEESVDLDDQLYFPPVDKEIDI

Query:  SKNIRDILHLEITMNVICNPGCKAI
        SK+IRD++HLEIT+  IC+  CK +
Subjt:  SKNIRDILHLEITMNVICNPGCKAI

Arabidopsis top hits

e value

%identity

Alignment

AT3G19810.1 Protein of unknown function (DUF177)

2.6e-72

60.89

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Query:  IKMKSTSIKCVKPTYQSLFEDNSIITDWGDQEGDIEEMSSPWEGAVIYKRNSSVSHVEYCTTLERLGLEKLSTDVSKSRASTMGLRVTKDVKDYPFGTPV
        IK+   +   +  + +S  E ++I  DW DQE +IE+  SPWEG+V+Y+RN+SV+HVEYCTTLERLGL +LSTDVSK RAS MGLRVTKDVKDYP GTPV
Subjt:  IKMKSTSIKCVKPTYQSLFEDNSIITDWGDQEGDIEEMSSPWEGAVIYKRNSSVSHVEYCTTLERLGLEKLSTDVSKSRASTMGLRVTKDVKDYPFGTPV

Query:  QISVDVTRKDKKLRLDGIVKTVITLNCYRCCEPAPECIFSNFSILLSEEPIEEPDVINMGIISGQDIFKTDNGNSDEDDEESVDLDDQLYFPPVDKEIDI
        Q+SVDV RK KKLRLDGIV+TVITL C RC E   E IFSNFS+LL+EEP+EEPDVI++G   G D  K +  + D++D+  +D +D+L+FPP  KEIDI
Subjt:  QISVDVTRKDKKLRLDGIVKTVITLNCYRCCEPAPECIFSNFSILLSEEPIEEPDVINMGIISGQDIFKTDNGNSDEDDEESVDLDDQLYFPPVDKEIDI

Query:  SKNIRDILHLEITMNVICNPGCKAI
        SK+IRD++HLEIT+  IC+  CK +
Subjt:  SKNIRDILHLEITMNVICNPGCKAI

Sequences

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CDS sequence

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ATGCGAGAGGAAAAGTCCTTCCATGAGTTCAGCCACTGGATAAAATTTTTCCGCGGAGCGTCATCGAAATTCCCACCATTTTCAAGAACCTCAGGATGGGATTCT
TTTCGCTTGACTTCATTAGCTGATTACATAAAATTTGCAGGGACTGTGTTATTTGTATCTACGGAAATTCCTTTACCCACTTTCTGTCCCCATTCGTTTAAGATG
CTAGCCACATTTCCCACATCATCCGTAGTTTCATCTTCTCATTCCAAGGAATTTATTAATGTATTCTACTTCGAATCTAAAGGGAATGTTTCTTTTAATTCACAT
TTTCGAGTTCCATGGAGATTTATGAGAAATATTCAGCCAAGCTTGGGTGACCCATGTATTAAGATGAAATCTACTTCCATTAAGTGTGTGAAACCTACGTATCAA
TCCCTTTTTGAGGACAATTCCATTATTACTGATTGGGGAGATCAAGAAGGGGATATTGAGGAGATGAGCTCACCTTGGGAAGGAGCAGTTATCTACAAGAGGAAC
TCTTCAGTTTCTCATGTGGAGTATTGCACAACATTAGAGAGGCTTGGGTTAGAGAAGCTTTCGACTGATGTCTCGAAATCTAGAGCATCGACGATGGGTCTACGC
GTAACGAAGGATGTGAAAGATTATCCCTTTGGAACACCTGTTCAAATCTCTGTTGATGTCACAAGGAAAGATAAAAAGTTGAGGCTGGACGGAATAGTTAAAACT
GTCATCACCCTGAATTGTTATAGGTGTTGTGAACCTGCTCCTGAATGCATTTTCTCAAATTTCTCCATTTTACTAAGCGAAGAACCAATTGAAGAACCTGATGTC
ATAAATATGGGAATCATTAGCGGGCAGGATATATTCAAGACTGATAATGGAAATAGTGACGAAGATGATGAAGAGTCGGTAGATTTGGATGATCAACTCTATTTT
CCTCCTGTGGACAAAGAGATAGATATATCAAAGAACATCAGAGACATCTTGCATCTAGAAATTACTATGAATGTGATATGTAATCCGGGATGCAAAGCTATAACA
TATGGAAACTTCCCCACTGGCAACTTGGGATACCAAGACATTACTATTCTAGCAATAAACAAAAACGAAAACACCGAGAGAGACGGCCCCAGAAAGCTGATCGCA
AGCTTTGCCGTTCCTGGGTCGAGGTCAGCCAAGGTCATACTGTTCACAAAATCAGAGGCAGCCATTGATGCATCTTGCAAGGCAAAGGGGATAGTCCTTGCAGCT
TCGTCAGAACCCTCCAGTCAGAAGAAAGGAACAGTAACAGTAAAATCGAGAGCAGGGGAAGCAATAGAAAGAATTTGA

mRNA sequence

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CGACATTTAGAGTAAAACTTAGTTAGAGGATTAAGTTTGCAATTATTTCTTTAAAGTTTAAGATTAAAATTACAAAAGGCTTATCACAAAATTTGAGATGTAATT
TACCTTAAATCTTCGATTTATCAAAACAATTTTAATTGATGAAGATAAATTTGAAAATTACGTACTATTTTCCATTACCCATTGATTAAAAACTTTATGCGAGAG
GAAAAGTCCTTCCATGAGTTCAGCCACTGGATAAAATTTTTCCGCGGAGCGTCATCGAAATTCCCACCATTTTCAAGAACCTCAGGATGGGATTCTTTTCGCTTG
ACTTCATTAGCTGATTACATAAAATTTGCAGGGACTGTGTTATTTGTATCTACGGAAATTCCTTTACCCACTTTCTGTCCCCATTCGTTTAAGATGCTAGCCACA
TTTCCCACATCATCCGTAGTTTCATCTTCTCATTCCAAGGAATTTATTAATGTATTCTACTTCGAATCTAAAGGGAATGTTTCTTTTAATTCACATTTTCGAGTT
CCATGGAGATTTATGAGAAATATTCAGCCAAGCTTGGGTGACCCATGTATTAAGATGAAATCTACTTCCATTAAGTGTGTGAAACCTACGTATCAATCCCTTTTT
GAGGACAATTCCATTATTACTGATTGGGGAGATCAAGAAGGGGATATTGAGGAGATGAGCTCACCTTGGGAAGGAGCAGTTATCTACAAGAGGAACTCTTCAGTT
TCTCATGTGGAGTATTGCACAACATTAGAGAGGCTTGGGTTAGAGAAGCTTTCGACTGATGTCTCGAAATCTAGAGCATCGACGATGGGTCTACGCGTAACGAAG
GATGTGAAAGATTATCCCTTTGGAACACCTGTTCAAATCTCTGTTGATGTCACAAGGAAAGATAAAAAGTTGAGGCTGGACGGAATAGTTAAAACTGTCATCACC
CTGAATTGTTATAGGTGTTGTGAACCTGCTCCTGAATGCATTTTCTCAAATTTCTCCATTTTACTAAGCGAAGAACCAATTGAAGAACCTGATGTCATAAATATG
GGAATCATTAGCGGGCAGGATATATTCAAGACTGATAATGGAAATAGTGACGAAGATGATGAAGAGTCGGTAGATTTGGATGATCAACTCTATTTTCCTCCTGTG
GACAAAGAGATAGATATATCAAAGAACATCAGAGACATCTTGCATCTAGAAATTACTATGAATGTGATATGTAATCCGGGATGCAAAGCTATAACATATGGAAAC
TTCCCCACTGGCAACTTGGGATACCAAGACATTACTATTCTAGCAATAAACAAAAACGAAAACACCGAGAGAGACGGCCCCAGAAAGCTGATCGCAAGCTTTGCC
GTTCCTGGGTCGAGGTCAGCCAAGGTCATACTGTTCACAAAATCAGAGGCAGCCATTGATGCATCTTGCAAGGCAAAGGGGATAGTCCTTGCAGCTTCGTCAGAA
CCCTCCAGTCAGAAGAAAGGAACAGTAACAGTAAAATCGAGAGCAGGGGAAGCAATAGAAAGAATTTGA

Protein sequence

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MREEKSFHEFSHWIKFFRGASSKFPPFSRTSGWDSFRLTSLADYIKFAGTVLFVSTEIPLPTFCPHSFKMLATFPTSSVVSSSHSKEFINVFYFESKGNVSFNSH
FRVPWRFMRNIQPSLGDPCIKMKSTSIKCVKPTYQSLFEDNSIITDWGDQEGDIEEMSSPWEGAVIYKRNSSVSHVEYCTTLERLGLEKLSTDVSKSRASTMGLR
VTKDVKDYPFGTPVQISVDVTRKDKKLRLDGIVKTVITLNCYRCCEPAPECIFSNFSILLSEEPIEEPDVINMGIISGQDIFKTDNGNSDEDDEESVDLDDQLYF
PPVDKEIDISKNIRDILHLEITMNVICNPGCKAITYGNFPTGNLGYQDITILAINKNENTERDGPRKLIASFAVPGSRSAKVILFTKSEAAIDASCKAKGIVLAA
SSEPSSQKKGTVTVKSRAGEAIERI

MELO3C015985 (gene) of Melon (DHL92) v4 genome